Beyond the two-conformer model: boat conformers provide stereoselectivity in SN1-type glycosylations of manno-type donors

Abstract

Oxocarbenium ions play a central role in shaping the stereochemical outcome of SN1-type glycosylation reactions. Generally, glycosylations involving 4H3-like glycosyl cations proceed with α-selectivity, whereas those involving 3H4-like cations furnish β-products, reflecting favorable chair-like transition states. While this analysis holds for many glycosyl cations, it breaks down for mannosyl donors. Although the mannosyl 3H4 cation is significantly more stable than its 4H3 counterpart, addition of weak carbon nucleophiles predominantly yields α-products. To elucidate the origin of this deviation from the predictive two-conformer model, we examined C-allylation reactions of nucleophiles spanning three orders of magnitude in reactivity with a series of glucosyl and mannosyl-type donors (mannose, rhamnose, and mannuronic acid). Quantum chemical calculations of the competing reaction pathways show that, for mannose, glycosylation proceeds under Curtin–Hammett control via α-attack on a B2,5-like (boat) oxocarbenium ion through an OS2-type transition state that avoids the severe steric (Pauli) repulsion present along the β-1C4 trajectory. Activation-strain and energy-decomposition analyses quantify the steric and electronic effects and explain why rhamnose, with reduced C6 steric demand, provides slightly more β-selective glycosylation reactions and mannuronic acid, of which the 3H4 is exceptionally favorable, shows β-selectivity. The mechanistic framework provides a quantitative basis for understanding and designing stereoselective SN1-type glycosylations.

Graphical abstract: Beyond the two-conformer model: boat conformers provide stereoselectivity in SN1-type glycosylations of manno-type donors

Supplementary files

Article information

Article type
Edge Article
Submitted
20 Mar 2026
Accepted
13 Apr 2026
First published
17 Apr 2026
This article is Open Access

All publication charges for this article have been paid for by the Royal Society of Chemistry
Creative Commons BY license

Chem. Sci., 2026, Advance Article

Beyond the two-conformer model: boat conformers provide stereoselectivity in SN1-type glycosylations of manno-type donors

W. A. Remmerswaal, D. Hoogers, J. Schoenmakers, F. M. Bickelhaupt, T. Hansen and J. D. C. Codée, Chem. Sci., 2026, Advance Article , DOI: 10.1039/D6SC02312F

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