RRKM-ME for Unimolecular Reactions Involving Intermediates with Multiple Conformers: Ozonolysis of Cyclopentene

Abstract

In the RRKM-ME calculations of gas-phase unimolecular reactions, reactants and intermediates are first uniformly partitioned into energy grains. The unimolecular rate coefficient k(E) within each grain is calculated using RRKM theory, while the master equation (ME) is employed to account for energy transfer between different grains due to collisions. Solving the RRKM-ME yields the time-dependent population and energy distributions of all species during the reaction. However, when reactants or intermediates have multiple conformers arising from internal rotations or ring puckering, including all conformers leads to an excessively high matrix order in RRKM-ME calculations, rendering them infeasible or computationally prohibitive. To address this, this study developed the MC-RRKM-ME method. By recognizing that multiple conformers of the same species have low interconversion barriers and rapid transition rates, the densities of states of these conformers are merged in the k(E) calculation. Treating multiple conformers as a single species by combining their densities of states significantly reduces the matrix order of ME, thereby maintaining kinetic accuracy while substantially lowering computational costs. After validating the algorithm with simple reaction systems, the MC-RRKM-ME method was applied to investigate the ozonolysis of cyclopentene, in which the Criegee intermediate (CI) possesses 100 conformations and ME order of 98,456. Merging the 100 CIs to two CIs reduces the ME order down to 7,244, resulting in ~2500-fold decrease in matrix-solving computational effort. MC-RRKM-ME calculations identified vinyl hydroperoxide (VHP) and dioxirane as the primary products in cyclopentene ozonolysis, with negligible secondary ozonides formation. The results are consistent with experimental observations.

Supplementary files

Transparent peer review

To support increased transparency, we offer authors the option to publish the peer review history alongside their article.

View this article’s peer review history

Article information

Article type
Paper
Submitted
26 Dec 2025
Accepted
12 Feb 2026
First published
13 Feb 2026

Phys. Chem. Chem. Phys., 2026, Accepted Manuscript

RRKM-ME for Unimolecular Reactions Involving Intermediates with Multiple Conformers: Ozonolysis of Cyclopentene

H. Chen, L. Wang and L. Wang, Phys. Chem. Chem. Phys., 2026, Accepted Manuscript , DOI: 10.1039/D5CP05023E

To request permission to reproduce material from this article, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements