Issue 10, 2025

Digital design and discovery of biological metal–organic frameworks for gas signaling

Abstract

Metal–organic frameworks (MOFs) are intriguing nanoporous materials with a wide variety of potential applications. Recent efforts in extending the functionalities of MOFs toward biological applications have inspired the development of Bio-MOFs comprising biological building blocks. Yet, while numerous experimental studies have attempted to synthesize different Bio-MOFs, computational screening of Bio-MOFs is impeded by the limited number of Bio-MOFs currently available. Here, we design a Bio-hMOF database containing 17 681 hypothetical structures, assembled from the fragments of 309 experimental Bio-MOFs, with rigorous geometry optimization and structural checks. Subsequently, a possible biological application of the Bio-hMOFs is demonstrated for the selective adsorption of signaling gases NO and CO. The effects of different inorganic and organic fragments on the mechanical properties of Bio-hMOFs are also examined. Finally, we identify mechanically stable Bio-hMOFs promising for selective NO/CO adsorption and holistically analyze the trade-off between adsorption capacity and mechanical strength. The digital Bio-hMOF database is available publicly, in which future studies can be leveraged to discover top candidates and unveil new structure–property insights into the further design of Bio-MOFs for targeted biological applications.

Graphical abstract: Digital design and discovery of biological metal–organic frameworks for gas signaling

Supplementary files

Article information

Article type
Paper
Submitted
20 May 2025
Accepted
20 Aug 2025
First published
16 Sep 2025
This article is Open Access
Creative Commons BY-NC license

Digital Discovery, 2025,4, 3008-3017

Digital design and discovery of biological metal–organic frameworks for gas signaling

Y. Yue, A. S. Palakkal, S. A. Mohamed and J. Jiang, Digital Discovery, 2025, 4, 3008 DOI: 10.1039/D5DD00213C

This article is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported Licence. You can use material from this article in other publications, without requesting further permission from the RSC, provided that the correct acknowledgement is given and it is not used for commercial purposes.

To request permission to reproduce material from this article in a commercial publication, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party commercial publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements