Issue 6, 2023

Multi-fidelity Bayesian optimization of covalent organic frameworks for xenon/krypton separations

Abstract

Our objective is to search a large candidate set of covalent organic frameworks (COFs) for the one with the largest equilibrium adsorptive selectivity for xenon (Xe) over krypton (Kr) at room temperature. To predict the Xe/Kr selectivity of a COF structure, we have access to two molecular simulation techniques: (1) a high-fidelity, binary grand canonical Monte Carlo simulation and (2) a low-fidelity Henry coefficient calculation that (a) approximates the adsorbed phase as dilute and, consequently, (b) incurs a smaller computational runtime than the higher-fidelity simulation. To efficiently search for the COF with the largest high-fidelity Xe/Kr selectivity, we employ a multi-fidelity Bayesian optimization (MFBO) approach. MFBO constitutes a sequential, automated feedback loop of (1) conduct a low- or high-fidelity molecular simulation of Xe/Kr adsorption in a COF, (2) use the simulation data gathered thus far to train a surrogate model that cheaply predicts, with quantified uncertainty, the low- and high-fidelity simulated Xe/Kr selectivity of COFs from their structural/chemical features, then (3) plan the next simulation (i.e., choose the next COF and fidelity) in consideration of balancing exploration, exploitation, and cost. We find that MFBO acquires the optimal COF among the candidate set of 609 structures using only 30 low-fidelity and seven high-fidelity simulations, incurring only 2%, 4% on average, and 20% on average of the computational runtime of a single-[high-]fidelity exhaustive, random, and BO search, respectively.

Graphical abstract: Multi-fidelity Bayesian optimization of covalent organic frameworks for xenon/krypton separations

Supplementary files

Transparent peer review

To support increased transparency, we offer authors the option to publish the peer review history alongside their article.

View this article’s peer review history

Article information

Article type
Paper
Submitted
21 Jun 2023
Accepted
13 Oct 2023
First published
16 Oct 2023
This article is Open Access
Creative Commons BY license

Digital Discovery, 2023,2, 1937-1956

Multi-fidelity Bayesian optimization of covalent organic frameworks for xenon/krypton separations

N. Gantzler, A. Deshwal, J. R. Doppa and C. M. Simon, Digital Discovery, 2023, 2, 1937 DOI: 10.1039/D3DD00117B

This article is licensed under a Creative Commons Attribution 3.0 Unported Licence. You can use material from this article in other publications without requesting further permissions from the RSC, provided that the correct acknowledgement is given.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements