Issue 36, 2021

Characterization of cisplatin/membrane interactions by QM/MM energy decomposition analysis

Abstract

We extend for the first time a quantum mechanical energy decomposition analysis scheme based on deformation electron densities to a hybrid electrostatic embedding quantum mechanics/molecular mechanics framework. The implemented approach is applied to characterize the interactions between cisplatin and a dioleyl-phosphatidylcholine membrane, which play a key role in the permeation mechanism of the drug inside the cells. The interaction energy decomposition into electrostatic, induction, dispersion and Pauli repulsion contributions is performed for ensembles of geometries to account for conformational sampling. It is evidenced that the electrostatic and repulsive components are predominant in both polar and non-polar regions of the bilayer.

Graphical abstract: Characterization of cisplatin/membrane interactions by QM/MM energy decomposition analysis

Supplementary files

Article information

Article type
Paper
Submitted
23 Jul 2021
Accepted
02 Sep 2021
First published
03 Sep 2021

Phys. Chem. Chem. Phys., 2021,23, 20533-20540

Characterization of cisplatin/membrane interactions by QM/MM energy decomposition analysis

G. Cárdenas, Á. Pérez-Barcia, M. Mandado and J. J. Nogueira, Phys. Chem. Chem. Phys., 2021, 23, 20533 DOI: 10.1039/D1CP03382D

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