Issue 34, 2020

Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects

Abstract

In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis in both gas phase and solution phase, we demonstrate that both these H-bonding modes exist simultaneously in low-energy conformers of capped derivatives of Attc, a thietane α-amino acid. 6-Membered ring inter-residue N–H⋯S interactions (C6γ), assisted by hyperconjugation between the thietane ring and the backbone, combine with 5-membered ring intra-residue backbone N–H⋯O[double bond, length as m-dash]C interactions (C5) to provide a C5–C6γ feature that stabilizes a planar geometry in the monomer unit. Two contiguous C5–C6γ features in the planar dimer implicate an unprecedented three-centre H-bond of the type C[double bond, length as m-dash]O⋯H(N)⋯SR2, while the trimer adopts two C5–C6γ features separated by a Ramachandran α-type backbone configuration. These low-energy conformers are fully characterized in the gas phase and support is presented for their existence in solution state.

Graphical abstract: Conformation control through concurrent N–H⋯S and N–H⋯O [[double bond, length as m-dash]] C hydrogen bonding and hyperconjugation effects

Supplementary files

Article information

Article type
Edge Article
Submitted
16 Jun 2020
Accepted
11 Aug 2020
First published
11 Aug 2020
This article is Open Access

All publication charges for this article have been paid for by the Royal Society of Chemistry
Creative Commons BY-NC license

Chem. Sci., 2020,11, 9191-9197

Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects

Z. Imani, V. R. Mundlapati, G. Goldsztejn, V. Brenner, E. Gloaguen, R. Guillot, J. Baltaze, K. Le Barbu-Debus, S. Robin, A. Zehnacker, M. Mons and D. J. Aitken, Chem. Sci., 2020, 11, 9191 DOI: 10.1039/D0SC03339A

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