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Miniaturized electrochemical platform with integrated PDMS reservoir for label-free DNA hybridization detection using nanostructured Au electrodes

Abstract

We report the fabrication and characterization of a miniaturized electrochemical platform for label-free detection of DNA hybridization. The proposed platform is fabricated by inculcating microfabrication and electrodeposition techniques. Comprising of a Ti working electrode with electrodeposited Au nanostructures, and Pt/Au pseudo-reference and counter electrodes, the device accounts for a limiting detection of 0.97 fM and a sensitivity of 20.78 (µA/µM)/cm2 with respect to Dengue virus specific consensus primer detection in the range of 10 fM - 1 µM. Here, incorporation of nanostructured Au on to the active sensing area not only enhances the current response by increasing the overall surface area, but it also facilitates facile probe DNA immobilization by gold-thiol self-assembly. We have used differential pulse voltammetric analysis in this study to monitor the changes in reaction kinetics with respect to the target hybridization. Furthermore, evaluation of reproducibility of the biosensor and its selectivity against interference has yielded acceptable outcomes. Additionally, in order to evaluate the system’s selectivity, we have successfully distinguished PCR amplified wild type and mutant target DNAs corresponding to the BRCA1 specific gene. Here, the mutant and the wild type target DNAs differ by two base deletion, and the fact that the system is able to differentiate even such minute dissimilarities in hybridization conditions, is an indicative of its superior performance.

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Supplementary files

Publication details

The article was received on 12 Jun 2019, accepted on 21 Sep 2019 and first published on 27 Sep 2019


Article type: Paper
DOI: 10.1039/C9AN01076A
Analyst, 2019, Accepted Manuscript

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    Miniaturized electrochemical platform with integrated PDMS reservoir for label-free DNA hybridization detection using nanostructured Au electrodes

    S. Tripathy, J. Joseph, S. Pothuneedi, D. Das, S. R. K. Vanjari, N. A. V. S. S. Rao and S. G. Singh, Analyst, 2019, Accepted Manuscript , DOI: 10.1039/C9AN01076A

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