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Issue 16, 2018
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Expanding antibiotic chemical space around the nidulin pharmacophore

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Reinvestigating antibiotic scaffolds that were identified during the Golden Age of antibiotic discovery, but have long since been “forgotten”, has proven to be an effective strategy for delivering next-generation antibiotics capable of combatting multidrug-resistant superbugs. In this study, we have revisited the trichloro-substituted depsidone, nidulin, as a selective and unexploited antibiotic lead produced by the fungus Aspergillus unguis. Manipulation of halide ion concentration proved to be a powerful tool for modulating secondary metabolite production and triggering quiescent pathways in A. unguis. Supplementation of the culture media with chloride resulted in a shift in co-metabolite profile to dichlorounguinols and nornidulin at the expense of the non-chlorinated parent, unguinol. Surprisingly, only marginal enhancement of nidulin was observed, suggesting O-methylation may be rate-limiting. Similarly, supplementation of the media with bromide led to the production of the corresponding bromo-analogues, but also resulted in a novel family of depsides, the unguidepsides. Unexpectedly, depletion of chloride from the media halted the biosynthesis of the non-chlorinated parent compound, unguinol, and redirected biosynthesis to a novel family of ring-opened analogues, the unguinolic acids. Supplementation of the media with a range of unnatural salicylic acids failed to yield the corresponding nidulin analogues, suggesting the compounds may be biosynthesised by a single polyketide synthase. In total, 12 new and 11 previously reported nidulin analogues were isolated, characterised and assayed for in vitro activity against a panel of bacteria, fungi and mammalian cells, providing a comprehensive structure–activity profile for the nidulin scaffold.

Graphical abstract: Expanding antibiotic chemical space around the nidulin pharmacophore

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Publication details

The article was received on 05 Mar 2018, accepted on 04 Apr 2018 and first published on 04 Apr 2018

Article type: Paper
DOI: 10.1039/C8OB00545A
Citation: Org. Biomol. Chem., 2018,16, 3038-3051
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    Expanding antibiotic chemical space around the nidulin pharmacophore

    M. T. Morshed, D. Vuong, A. Crombie, A. E. Lacey, P. Karuso, E. Lacey and A. M. Piggott, Org. Biomol. Chem., 2018, 16, 3038
    DOI: 10.1039/C8OB00545A

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