We report that Cy3 undergoes triple helix conformation-specific blinking in DNA. Blinking patterns were affected by the stabilization of the Hoogsteen base-pair, suggesting that not only the presence but also the fluctuating behaviour of the triple helix can be monitored by the changes in the Cy3 blinking patterns.
K. Kawai and A. Maruyama, Chem. Commun., 2015, 51, 4861 DOI: 10.1039/C5CC00607D
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