Issue 48, 2013

Spin state preference and bond formation/cleavage barriers in ferrous-dioxygen heme adducts: remarkable dependence on methodology

Abstract

The electronic structure of oxy- and aqua-bound active sites of hemoglobin (Hb) and cytochrome P450 mono oxygenase (CYP450) are investigated by applying a wide range of DFT functionals including the pure BP86, the hybrid B3LYP and the recently developed hybrid meta-GGA (M06 family). Mixed descriptions of the electronic structure and widely differing order of spin-multiplet energies are obtained depending on the functional employed. A reproduction of the experimental singlet ground state of oxy Hb was achieved by all functionals: convergence to the unrestricted broken symmetry solution was favored, except for BP86 where a direct Kohn–Sham determinant wave function was found to have the lowest energy. Ferrous-dioxygen bond cleavage for both models clearly shows preference for charge separation with superoxide liberation in the case of CYP450 (thiolate axial ligand), in comparison to liberation of a clear oxygen molecule in case of Hb. Nitric oxide bound superoxide reductase (SOR) is also investigated, as a model with a known S = 3/2 spin state; results provided by B3LYP, M06 and M06L are shown to correlate well with experimental data whereas the performance of the MP2 method was relatively poor. Fe–N bond cleavage was shown to give insight into the mechanism of hydrogen peroxide liberation in SOR.

Graphical abstract: Spin state preference and bond formation/cleavage barriers in ferrous-dioxygen heme adducts: remarkable dependence on methodology

Supplementary files

Article information

Article type
Paper
Submitted
12 Oct 2013
Accepted
22 Oct 2013
First published
25 Oct 2013

RSC Adv., 2013,3, 26194-26204

Spin state preference and bond formation/cleavage barriers in ferrous-dioxygen heme adducts: remarkable dependence on methodology

A. A. A. Attia, A. Lupan and R. Silaghi-Dumitrescu, RSC Adv., 2013, 3, 26194 DOI: 10.1039/C3RA45789C

To request permission to reproduce material from this article, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements