Open Access Article
Molly J. Clark
ab,
Daniel N. Rainer
b,
Josiah Yanga,
Simon J. Colesb,
Darren Bradshaw
b and
Adrian M. Nightingale
*a
aMechanical Engineering Department, School of Engineering, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, SO17 1BJ, UK. E-mail: a.nightingale@southampton.ac.uk
bSchool of Chemistry & Chemical Engineering, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, SO17 1BJ, UK
First published on 23rd June 2026
Metal organic frameworks (MOFs) have numerous important large-scale industrial applications such as gas storage, energy storage, and water purification and remediation. The prospect of industrial usage means there is a need to develop efficient processes for scalable quality-assured MOF production. Flow reactors offer a promising route to scalable MOF synthesis. They feature high space-time-yields, easy automation and reduced manual handling, however quality assurance is challenging: the standard MOF analysis methods (X-ray diffraction, electron microscopy, gas adsorption etc.) are slow, costly, and manually intensive, and hence difficult to apply to production scenarios. Here we present an alternative approach to MOF analysis that is quick, easily automated, and can be implemented into flow reactors for continuous assessment of flow-synthesised MOFs. Rather than look to the standard MOF characterisation methods, we developed an “application-led” quantitative test that mimicked an example end application – water remediation – by testing how well the reaction product could remove an organic dye from solution. The method was integrated into a flow reactor making HKUST-1 MOF and used to continuously monitor the reactor output (0.67 Hz frequency) in near real-time (22.4 min lag). It could clearly differentiate product made under different reaction conditions (most notably reaction stoichiometry) with the amount of dye removed corresponding to the composition of the product (HKUST-1 versus unwanted side-product). The product could be assessed “on-the-fly”, with changes in product continuously tracked as reaction conditions were systematically altered. This work will be a starting point for other application-led online analysis methods and, if combined with computer-controlled flow reactors opens the way to rapid automated exploration of MOF reaction space.
MOFs can be readily synthesised by various methods including solvothermal,10 microwave-assisted,11 electrochemical,12 mechanochemical,13 and chemical vapour deposition,14 however recent advances have shown that flow synthesis can produce MOFs with exceptional levels of efficiency and throughput,15,16 with the highest reported space-time-yields for MOFs having been via flow synthesis.15 Flow synthesis involves the continuous introduction of reagents into a reactor manifold where they mix and react to yield a stream of product. Different chemical processes, such as multiple reaction stages, work-up, and purification can be concatenated into a single process stream, allowing integrated automated production with reduced manual handling.17,18 Larger quantities can be made by running for longer times or by running several reactors in parallel19 (thus increasing output without changing overall process chemistry), making flow reactors highly suitable for small to medium scale production.
One of the key advantages of flow synthesis is the ability to use inline analysis (where the reaction stream is probed non-invasively) or online analysis (whereby samples are autonomously taken and analysed) to monitor reaction progress and assess product quality in real-time.20 This vastly increases reactor utility, not only allowing quality-assured production but also enabling high-throughput reaction space exploration21,22 and algorithm-driven reaction optimisation.23–26 While many different inline and online analysis methods have been used with flow synthesis (e.g. inline IR, NMR, optical absorbance and fluorescence, and online chromatographic methods27,28) inline and online analysis of MOFs is challenging. The standard MOF characterisation techniques (e.g. X-ray diffraction, electron microscopy, gas adsorption) are intrinsically offline due to equipment size, cost, manual operation, and measurement duration and hence difficult to translate to an equivalent inline or online analysis method. The few reports describing inline analysis of MOFs feature flow synthesis at synchrotron beamlines29,30 to study crystallisation in situ using high-power X-ray diffraction. While effective, this is not an option for routine industrial or laboratory synthesis and there remains a need for accessible inline or online analysis methods.
Here we describe a method for online analysis of MOFs that can be routinely implemented in flow synthesis. Instead of looking to implement the typical MOF characterisation techniques (X-ray diffraction, gas adsorption etc.), we use an alternative approach: devising a quantitative test based on an end-use application. This approach looks to determine the “fitness” of the product to perform the target application rather than directly measure its physicochemical properties. To showcase this approach we describe the flow-synthesis and analysis of exemplar MOF HKUST-1 [Cu3(BTC)2(H2O)3] (where BTC = 1,3,5-benzenetricarboxylate), which is synthetically and structurally well understood. We introduce an online analysis method, inspired by MOF use for water remediation,31–33 which quantifies the newly-synthesised framework's ability to remove organic molecules from solution. We show how this method could successfully assess product quality in near real-time and differentiate between favourable and non-favourable reaction conditions.
Initial testing focussed on the flow synthesis in isolation to establish appropriate reaction conditions for HKUST-1 formation in this reactor. Both reactor residence time (tres) and metal
:
linker ratio (M
:
L) had notable effects on the quantity and phase purity of the MOF product. For all M
:
L values, increasing tres (by decreasing total flow rate) up to tres = 40 min steadily increased the amount of product per unit volume of reaction mixture, with minimal increases thereafter (Fig. 2a). When stoichiometry was varied, M
:
L values at 1
:
2 gave maximum yield, decreasing as stoichiometry became progressively more metal-or linker-rich. It should be noted that while longer residence times gave more product per unit volume of reaction mixture (which will give greater efficiency as determined by green chemistry metrics such as E-factor) the accompanying reduced flow rates results in reduced space-time yields (STYs): STYs for M
:
L = 1
:
2 were 137 kg m−3 day−1 at tres = 10 min, decreasing to 53 kg m−3 day−1 at tres = 40 min. These values are at the lower end of previous literature values (which range from 10 s to 1000 s kg m−3 day−1)34 and is commensurate with the fact that the synthesis was not optimised for STY, with reaction temperatures lower – and reagent loadings up to an order of magnitude lower – than previous flow syntheses of HKUST-1.34–37
Offline PXRD analysis confirmed the presence of crystalline products (Fig. 2b and c) with sharper diffractograms obtained at longer reaction times – indicative of the formation of larger crystallites (compare e.g. Fig. 2b, tres = 40 min, vs. Fig. 2c, tres = 20 min). While all diffraction patterns featured coincident peaks with the HKUST-1 reference spectra, additional peaks (e.g. at 2θ = 8° and 28°) were evident under linker-rich synthesis conditions (most notably where M
:
L = 1
:
4 or 1
:
8) and were also more pronounced at lower reaction times (Fig. 2c). These peaks are consistent with the presence of an additional crystalline phase.
The product samples were then examined using scanning electron microscopy (SEM). In samples where the PXRD patterns closely matched the expected HKUST-1 pattern (e.g. Fig. 3a, M
:
L = 1
:
2, tres = 40 min) sub-micron crystals with the typical octahedral morphology38,39 were observed. Where the PXRD data featured prominent additional peaks (Fig. 3b, M
:
L = 1
:
8, tres = 20 min) the morphology was very different, primarily consisting of elongated crystals with a hexagonal cross section, consistent with the presence of a different product. To identify this product and confirm the identity of the supposed HKUST-1 crystals, 3D electron diffraction (3D ED) was used to probe individual crystals from each sample and determine their crystal structures (Fig. 3c–g).
The crystal structure from the octahedral crystals obtained at M
:
L = 1
:
2, tres = 40 min (Fig. 3c and d) showed the expected HKUST-1 structure with characteristic large pores and twisted boracite topology (a = b = c = 25.9 Å, space group Fm3m). By contrast, the sample obtained at M
:
L = 1
:
8, tres = 20 min (Fig. 3e–g) had a very different and notably non-porous structure (a = 3.7 Å, b = 18.3 Å, c = 13.5 Å, β = 91.55°, space group P21/c). While these structures were obtained from individual crystals, PXRD fully confirmed that they were representative of the bulk material. Simulated PXRD patterns generated from the 3D ED derived structures matched exceptionally well with the experimental patterns (Fig. 3h), further confirming that these two different reaction conditions favoured very different products.
The 3D ED structures show that the material generated under M
:
L = 1
:
8 linker-rich conditions was an extended Cu
:
BTC coordination polymer with a more ligand-heavy composition (Cu
:
BTC = 1
:
2) compared with HKUST-1 (Cu
:
BTC = 1
:
0.66), commensurate with the linker-rich formation conditions. In a previous report of this Cu
:
BTC polymer it was shown that the differing crystal structure resulted in very different material properties compared to the HKUST-1 target phase – most notably a specific surface area (SSA) that was lower by orders-of-magnitude40 due to the absence of large-volume pores. Hence it is clear that synthesis conditions need to be tightly controlled in this flow reactor to ensure crystalline HKUST-1 is produced and to limit unwanted side-products with inferior properties. Given that this reaction could produce material with different potential compositions, it also therefore provided an excellent opportunity to test whether online application-driven analysis could differentiate between the two potential products and hence determine product quality.
In developing an application-based online analysis method, a suitable application needed to be selected. Water remediation, where the MOF is used as an adsorbent to remove pollutants,31–33 was chosen as HKUST-1 has been shown to be highly effective for removing organic contaminants38,41–44 and could be feasibly translated into an online test. To quantify the product's ability to remove organic molecules from solution, an online test was built around removal of an organic dye as dye concentrations can be easily quantified inline via optical methods. Methylene blue was used as the test dye as it has been previously shown to adsorb strongly to HKUST-1,38,41,42 was found in preliminary testing to be soluble in the reaction solvent, stable under ambient conditions, and unaffected by the reaction starting materials.
The adsorption stage (Fig. 1A) was first tested in isolation by flowing through the dye (0.01 mM in ethanol) with a pre-synthesised suspension of HKUST-1 particles made in a batch reactor (dye and HKUST-1 supplied at a 1
:
1 volumetric ratio). The HKUST-1 was supplied in its raw reaction mixture (i.e. containing unreacted metal salt and linker molecules) and was diluted inline to give a range of product loadings (Fig. 4a) to test how the amount of HKUST-1 would correlate with dye adsorption. Fig. 4b shows the absorbance spectra of the free dye following incubation, collection, and subsequent removal of the MOF (along with any adsorbed dye) via centrifugation. The spectral shape showed minimal change, indicating no chemical change to the dye, and the intensity decreased with increasing HKUST-1 loading as expected due to adsorption of the dye. When the quantity of remaining dye was plotted against loading (Fig. 4c) there was a smooth monotonic relationship, indicating that the amount of adsorbed dye is a good indicator for the amount of HKUST-1 formed.
It should be noted that these measurements were carried out on a raw reaction mixture, confirming that in the final setup (Fig. 1) product could be fed directly from the reaction module into the analysis section without need for work-up. This is advantageous as an additional work up stage would introduce additional complexity and lag-time between reaction and analysis.
The adsorption stage (Fig. 1A) was finally integrated with both the synthesis module (Fig. 1, top section), and inline dye separation (Fig. 1B). Inline separation was achieved by cross-flow filtration, with the MOF and dye mixture (donor stream) flowing over a hollow-fibre polyethersulfone (PES) filter membrane, allowing free dye to diffuse across the membrane into an acceptor stream of ethanol flowing on the opposite side. We used a co-flow arrangement (both donor and acceptor streams flowing in the same direction, see Fig. 1B) which meant a maximum of 50% of free (unadsorbed) dye could be extracted from the donor stream. Counter-flow, where donor and acceptor streams flow in opposite directions, could potentially remove 100% and was initially trialled, however this flow arrangement proved problematic; when operated in counter-flow there was pressure-driven mass transport across the membrane (rather than diffusion-driven transport) due to the pressure drop through the filtration device. This resulted in clogging due to MOF being driven against the filter membrane surface. Using co-flow however, the matched flow direction and flow rates resulted in no pressure difference across the membrane, cross-membrane transport was only diffusion-driven, no clogging was encountered, and all product was recovered.
To test the dye adsorption and separation stages in combination with the synthesis stage, we repeated the reaction parameter screening experiment (Fig. 2). The product mass flow rate results were near-identical to those previously observed with product increasing with tres up to 30 min, a maximum yield of 1.5 mg ml−1, and a high dependency on stoichiometry: product yield peaking at M
:
L = 1
:
2 and decreasing as stoichiometry deviated from this value (SI Fig. S2). The dye adsorption results showed a strikingly different trend however (Fig. 5). There was a much weaker dependence on residence time and a very different dependency on stoichiometry, with dye adsorption decreasing monotonically as M
:
L became increasingly linker-rich.
![]() | ||
Fig. 5 The amount of dye removed by the reaction product, shown as a function of M : L and tres, in the integrated setup combining synthesis and analysis. | ||
The seeming disparity between the stoichiometry dependency of the product mass flow rate and dye adsorption are explained by considering that the reactor can generate two potential products. The dye adsorption results match well with PXRD results, where the features associated with the non-porous Cu-BTC polymer byproduct (Fig. 2 and 3) appeared at higher linker content. While we know that HKUST-1 is effective at removing dye (Fig. 4), the non-porous Cu
:
BTC polymer has much lower SSA,40 which has been recently shown to correlate with dye adsorption capability.45 Hence the dye adsorption dependence on stoichiometry is indicative of the different products being produced under different reaction conditions.
We then completed the online analysis setup by adding inline absorbance measurement (Fig. 1C) to yield the fully integrated flow synthesis and online analysis setup (Fig. 1 and image in SI S1) which produced real-time data as the material was being produced. To show how it could be used to track reaction conditions “on-the-fly” we varied M
:
L ratio (at constant tres = 40 min) whilst monitoring dye removal. The residence time in the analysis module meant that results were obtained 22.4 min after the reaction stream exited the reaction module. The stoichiometry was changed approximately every 15 min, starting with M
:
L = 1
:
8, then increasing the metal content stepwise until it reached M
:
L = 1
:
0.5. As shown in Fig. 6, the online analysis produced a continuous noise-free signal (measurement rate 0.67 Hz) with clear differentiated responses for each set of reaction conditions and smooth transitions traced in exacting detail. Stable plateaued measurements were obtained after each change of M
:
L, indicating the stability of both the analytical method and the synthesis conditions. Dye absorption increased with metal content, consistent with earlier results and fully consistent with production of higher quantities of HKUST-1. After the M
:
L ratio had reached 1
:
0:5, it was then shifted back towards more ligand-rich conditions, repeating the measurements at M
:
L = 1
:
1, 1
:
2, and 1
:
4. The repeats closely matched initial results – 52.9% vs. 52.7% for 1
:
4, 58.8% vs. 57.5% for 1
:
2, 64.0% vs. 63.1% for 1
:
1 – showing the reproducibility of the synthesis and online analysis method. Combined with the fine, noise-free nature of the measurements, this clearly validates the method and shows its ability to assess and track synthesis in near real-time.
Using an application-led approach for online analysis opens up an array of potential methods with the dye adsorption method used here just one possibility. Dye absorption was a direct analogy for an end application of remediating water fouled by organic pollution, however a similar approach could be adopted for other applications. Online analysis methods will be necessarily limited to solution-based protocols (excluding gas-based end-use applications) however that still includes several applications based around solution-based adsorption such as sensing and catalysis. Finally we note that while this approach does not directly characterise physicochemical properties, if the MOF is to be used in – or developed for – a specific application, analytical methods that directly link to that application will be the most pertinent test of product quality.
The exit of the silica capillary was attached to a second T-junction which introduced methylene blue solution (0.01 mM in ethanol). The methylene blue was added at the same flow rate as the combined reagent flow rate to ensure a constant volumetric ratio between the dye solution and the reaction solution. The combined flow subsequently passed through PTFE tubing (4 m, ID = 1 mm). PTFE tubing was used as in initial tests using silica capillary, dye was found to adhere to channel walls. This resulted in a relative residence time of 41% compared to the residence time in the silica capillary manifold for synthesis. Initial offline testing showed that a minimum of 2 min was required for adsorption with freshly made reaction product (data not shown), meaning that in the integrated system, reaction residence times down to a minimum of 5 min could be tolerated. The process stream exited this section into a Repligen Spectrum MicroKros hollow fibre filter (65 cm length, 9 lumens of 0.5 mm inner diameter, PES membrane material with 0.2 µm pore size, 92 cm2 surface area). The process stream travelled through the exterior, while ethanol (the acceptor stream) travelled through the hollow fibre filters in a co-flow regime at the same flow rate. The dimensions of the filtration device gave a comparative residence time of 15% compared to the residence time in the silica capillary manifold for synthesis. Initial offline testing showed that an approximate minimum residence time of 1 min was required for the expected 50% dye removal, which would correspond to a minimum 6.7 min reaction residence time.
After exiting the filtration device, the acceptor stream was directed into a spectrophotometric flow cell to determine the amount of dye that had been removed from the process stream. The flow cell was composed of a 3D-printed structure (designed in-house and printed in black PLA) which housed PTFE tubing (ID 1 mm), through which the acceptor stream flowed, and optical components which directed a spectrum of visible light across the channel. The light came from a halogen lamp (Ocean Optics HL-2000) and was transmitted to the tubing in the flow cell via an armoured fibre optic assembly (Ocean Optics INTSMA-200). Light transmitted across the channel was collected into another fibre optic assembly and delivered to a CCD spectrophotometer (Ocean Optics FLAME-S-VIS-NIR-ES). OceanView software (v 2.0) was used to record the spectra, using an integration time of 1500 µs per scan and with 1000 scans averaged to generate each spectrum. The equations used to calculate the quantity of adsorbed dye are given in the ESI. As absorbance measurements require accurate blank measurements, a T junction and on/off valve (IDEX, not shown in Fig. 1) were included upstream of the flow cell, to allow a blank to be flushed through the flow cell periodically. The blank used was the supernatant from an isolated reaction (i.e. with product removed) – mimicking the process stream we would expect to flow through the flow cell in the absence of any introduced dye. This was prepared by mixing the copper salt and organic linker solutions with an equal volume of ethanol, leaving for 60 minutes then centrifuging (1 min, 10
000 rpm, Eppendorf 5417R) and filtering.
| This journal is © The Royal Society of Chemistry 2026 |