Open Access Article
Satoru
Yamamoto
*a,
Riichi
Kuwahara
b and
Keiji
Tanaka
*ac
aCentre for Polymer Interface and Molecular Adhesion Science, Kyushu University, Fukuoka 819-0395, Japan. E-mail: s-yamamoto@cstf.kyushu-u.ac.jp
bDassault Systèmes K. K., Tokyo 141-6020, Japan. E-mail: Riichi.KUWAHARA@3ds.com
cDepartment of Applied Chemistry, Kyushu University, Fukuoka 819-0395, Japan. E-mail: k-tanaka@cstf.kyushu-u.ac.jp
First published on 3rd February 2026
Understanding the buried interface between silica and epoxy resin is crucial for improving the performance and reliability of epoxy composites and adhesives. Here, molecular dynamics simulations were used to reveal a heterogeneous molecular picture of aggregation and curing at the amorphous silica/epoxy interface. A density increase was observed within 2 nm of the interface, driven by the orientation and packing of epoxy and amine molecules. Smaller amines segregated near the substrate, accelerating interfacial curing in the early stages. However, subsequent reactions slowed due to restricted mobility, resulting in a ∼10% lower conversion than in the bulk. Unreacted monomers and isolated fragments accumulated near the interface, indicating adverse effects on adhesion. These findings provide molecular-level insights into buried interfaces and inform strategies for improving adhesion and reliability in epoxy-based composites and adhesives.
Spectroscopic techniques such as X-ray photoelectron spectroscopy (XPS),30 sum-frequency generation (SFG) spectroscopy,31,32 and neutron reflectivity (NR) measurements33 are effective experimental approaches to reveal heterogeneous aggregation states at buried interfaces. Segregation of amine compounds at the interface between the epoxy/amine stoichiometric mixture and copper surface was revealed using XPS.30 Heterogeneity in the curing process of an epoxy resin at the quartz interface was revealed using SFG spectroscopy while the presence of aggregated water between the cured epoxy product and the silicon substrate was elucidated by NR measurements.33 However, the information obtained is statistical and it is difficult to precisely determine the molecular picture, such as the local orientation of a particular functional group. Because of this difficulty in observing buried interfaces, heterogeneous aggregation states at interfaces are not yet fully understood.
In contrast, with the proper problem setup, molecular dynamics (MD) simulations have the potential to reveal a detailed molecular picture at the interface as well as in the bulk.34–44 We have successfully calculated the aggregation state and curing reaction at the interface of epoxy resins by MD simulation and revealed the heterogeneity of epoxy resins, which is different from the bulk.26 The substrates chosen were mostly crystalline structures such as copper, silicon, and quartz.45–47 However, the surface of aluminum, for example, is covered with an amorphous oxide layer,48 and silica particles are inherently amorphous,49 so it is necessary to consider such amorphous solid surfaces if a more realistic system is required. Recently, we proposed a method to create amorphous alumina and silica substrates on which we calculated the aggregation state and curing reaction of epoxy resins.50,51 Although the results obtained were basically the same as those for crystal surfaces, there were some useful findings, such as differences in the roughness of the substrate surfaces. However, those studies did not address the relationship between detailed molecular orientation and reaction kinetics, or the spatially resolved curing behavior. Incorporating these elements allows a more comprehensive molecular picture of interfacial curing to be established.
In this study, MD simulations were conducted to investigate epoxy resins at interfaces with silica particles, which are commonly used as fillers. The aggregation states of an epoxy resin at the amorphous silica interface and the subsequent network formation process were analysed to elucidate the heterogeneous molecular picture near the solid interface. Particular attention was given to the molecular orientation at the outermost interface on the substrate side and its influence on reaction kinetics, as well as to the presence of incompletely cross-linked regions.
To investigate the aggregation states in the unreacted state, MD simulations were performed starting from the initial structure shown in Fig. 1(b). The simulations were run for 1 ns at 363 K with a time step of 1 fs under the NVT ensemble.57 The Forcite module of Materials Studio 2025 (Dassault Systèmes) was used along with the COMPASS III force field.58,59 For the silica substrate, the coordinates were constrained except for the hydrogen atoms of the surface SiH groups and the OH groups of SiOH.50 Temperature control was achieved using a Nosé–Hoover-Langevin (NHL) thermostat, and electrostatic interactions were computed using the Particle–Particle Particle–Mesh (PPPM) algorithm. The van der Waals interactions were calculated using an atom-based summation method with a cutoff distance of 1.25 nm.
Epoxy and amine compounds react in two steps to form a three-dimensional network structure.34 In the first step, an epoxy compound reacts with a primary amine to form a secondary amine, which subsequently reacts with another epoxy compound in the second step to form a tertiary amine. The curing reaction between epoxy and amine compounds was investigated by MD simulation.26,57,60 When the terminal carbon of an epoxy group and the nitrogen atom of an amino group approach within a reaction distance of 0.6 nm, an Arrhenius-type reaction probability k is defined as follows;
| k = A × exp(−Ea/RT) | (1) |
The dependence of the progress of the curing reaction on the distance from the substrate was investigated. Fig. 3(a) shows the distribution of reacted epoxy groups at overall reaction conversion of 10% and 80% as a function of distance from the substrate. The distance from the substrate was divided into 0.5 nm intervals, and the reaction conversion evaluated within each interval was defined as the local conversion. At an early-stage conversion of 10%, the local conversion increased to approximately 17% within 1 nm of the outermost interface on the substrate side. This is attributed to the segregation of amines at the interface, which provides more reaction partners for epoxy. Previous SFG spectroscopy studies have also reported faster reactions at the outermost interface on the substrate side, ascribed to the densification and orientation of reactive functional groups, supporting these results.32 In contrast, at 80% conversion, the local conversion near the interface was about 10% lower than the system average, while conversion increased beyond 7 nm from the substrate. These trends reflect the distance-dependent mobility of unreacted species.
Fig. 3(b) shows the diffusion coefficient of unreacted species as a function of distance from the substrate. The system was divided into 1 nm layers, and the mean squared displacements (MSD) of epoxy and amine molecules initially in each layer were evaluated over a 1 ns MD simulation to calculate diffusion coefficients. In long MD simulations, molecules may migrate into adjacent regions. To minimize this effect, the MSD was calculated using short 1 ns trajectories. In the bulk region, the diffusion coefficient for 4–7 nm was close to (1.08 ± 0.07) × 10−10 m2 s−1, obtained using a cubic cell under periodic boundary conditions. However, it decreased progressively closer to the substrate and was reduced to about 1/3 of the bulk value below 2 nm, reflecting suppressed mobility near the interface. In addition to the reduced diffusion coefficient, several other factors contribute to the slower interfacial reaction, including a reduced number of available reaction partners due to the presence of the substrate, local stoichiometric imbalance caused by preferential amine segregation, and steric constraints that limit the accessibility of epoxy groups. The interface therefore represents a diffusion-limited and accessibility-limited regime, leading to incomplete conversion. On the other hand, beyond 8 nm, the diffusion coefficient increased, consistent with the higher reaction conversion observed in the surface region.
To discuss the reaction state of the amine compounds, Fig. 3(c) shows the dependence of the fraction of primary, secondary, and tertiary amines on distance from the substrate at 80% reaction conversion. The fraction of primary amines increased markedly at the outermost interface on the substrate side below 1 nm and remained at 0.1–0.2 beyond this region. Secondary amines were present at fractions below 0.1 throughout all regions, and most had converted to tertiary amines by the end of the 1st step reaction, indicating progression to the 2nd step reaction. In contrast, tertiary amines exhibited low fractions at the outermost interface on the substrate side below 1 nm but increased to around 0.7–0.8 beyond this region, reaching up to 0.9 at distances greater than 9 nm. This behavior of tertiary amines was in good agreement with the reaction conversion profile at 80% shown in Fig. 3(a).
The orientation of molecules at the outermost interface on the substrate side within 1 nm from the substrate was then analyzed. As both DGEBA and DDM are anisotropic shaped molecules, they were expected to orient along the substrate. Thus, as shown in Fig. 4(a), three orthogonal vectors were defined to characterize molecular orientation. Vector v1 was defined along the principal molecular axis, corresponding to the direction connecting the ether oxygen atoms for DGEBA and nitrogen atoms for DDM. Vector v2 was defined along the phenyl group, as the vector connecting the central carbon atom to the ether oxygen or nitrogen atom. Vector v3 was defined as the normal to the plane spanned by v1 and v2. Although phenyl rings undergo thermal rotation around v2, this rotational motion does not alter the direction of v2 itself. The angle θ between the z-axis and the vector extending from the substrate toward the epoxy resin side, or equivalently from the −z-axis, was evaluated. Since the orientation was symmetrical around 90° when evaluated over 0–180° from the z-axis, the orientation along the substrate was considered in the range of 0–90°. Fig. 4(b) shows the orientational frequency of vector v1 along the principal axis of the DGEBA before and after the curing reaction. The orientation angles were plotted in 10° increments, counting the number of occurrences within each range and plotting their frequency. Before the reaction, the frequency increased as it approached 90°, indicating strong in-plane orientation of the substrate. After the reaction, although the in-plane orientation was maintained, the orientation distribution became slightly broader. Our previous study revealed that DGEBA monomers oriented toward the substrate became constrained upon incorporation into the cross-linked structure during the reaction and could no longer orient as freely as before, which is in good agreement with the present result.26Fig. 4(c) shows that DDM, similar to DGEBA, also orients its principal axis parallel to the substrate. However, compared to DGEBA, the molecular principal axis of DDM is shorter and less anisotropic, resulting in a lower degree of orientation before the reaction, which remained almost unchanged even after the reaction. This behavior is attributed to the greater molecular flexibility of DDM, arising from its smaller molecular size and the absence of the two methyl groups at the molecular center present in DGEBA.
Fig. 4(d and e) show the orientational frequency of vector v2, defined along the phenyl group for DGEBA and DDM, respectively. Although less marked than that of the principal axis, in-plane orientation was observed near 90° both before and after the reaction, and it was stronger in DGEBA than in DDM, similar to v1. In both epoxy and amine compounds, when one phenyl ring aligns parallel to the substrate, the other ring becomes tilted due to the molecular geometry of DGEBA and DDM, resulting in a broader angular distribution. The in-plane orientation of v1 and v2 contributed to the increase in density at the outermost interface on the substrate side, as shown in Fig. 2(b).
Fig. 4(f) shows the orientation frequency of vector v3 for DGEBA, which exhibits a slight increase toward 0°, suggesting that the plane formed by v1 and v2 tends to align slightly with the substrate. This is reasonable given the presence of methyl groups bonded to the central carbon atom of the DGEBA molecule, together with the size and bond angles of these methyl groups. In contrast, as shown in Fig. 4(g), the orientation frequency of vector v3 for DDM was broadly distributed. This result indicates that while DDM molecules orient their principal axis and phenyl group along the substrate, they are less constrained around the principal axis. This behavior is likely attributable to the smaller molecular size of DDM and the absence of methyl groups attached to its central carbon atom.
The relationship between the initial orientation of the molecules at the outermost interface on the substrate side and the time at which the reaction occurred was then investigated. Fig. 5 shows the relationship between the reaction time and the initial orientation angle for v1 (a and b), v2 (c and d) and v3 (e and f). First, the dependence of reaction time on the initial orientation angle was evaluated. For both v1 and v2, groups oriented at angles above 60° reacted at similarly early stages, with no significant differences observed. However, in DDM, molecules whose principal axis (50–60°) and phenyl groups (30–40°) were weakly oriented along the substrate tended to react more slowly as shown in Table S1 (See SI). Thus, the slower reaction of these groups does not arise simply from their lower population, but rather reflects their reduced accessibility within the interfacial environment. In contrast, no such tendency was observed in DGEBA. This is likely because molecules oriented at the outermost interface on the substrate side can readily find reaction partners, whereas the number of available partners decreases with increasing distance from the interface.32 Next, these results indicate that a large number of molecules reacted very early (∼0.03 ns). Counting molecules that reacted by 0.03 ns, the percentage was 29.7 ± 2.9% for DGEBA and 28.0 ± 6.3% for DDM. Similarly, the relationship between the initial orientation of the molecules and the reaction time was investigated for the bulk region, which is about 5 nm away from the substrate as shown in Fig. S2 (see SI). In the bulk region, the orientation of the molecules was isotropic, which is to be expected as there is no restraint from the substrate. Furthermore, the percentage of molecules that reacted by 0.03 ns was 16.9 ± 2.2% for DGEBA and 17.6 ± 2.3% for DDM, which was considerably lower than at the outermost interface on the substrate side.
The interaction between the silica surface and specific functional groups was investigated. Fig. 6(a) shows the radial distribution function between the hydrogen atoms of the SiOH groups and the oxygen atoms of the epoxy groups before the reaction or the COH groups after the reaction. Even before the reaction, a peak appeared at 0.2 nm, corresponding to the typical hydrogen bonding distance, and this peak became more pronounced after the reaction. This makes it clear that the reaction opens an epoxy ring to form a COH group, which subsequently forms a hydrogen bond with a SiOH group. While hydrogen bonding is expected to enhance the alignment of vector v1 along the substrate, as depicted in Fig. 4(b), it competes with the constraint caused by incorporation into the cross-linked structure, and the results suggest that the latter is dominant.
On the other hand, Fig. 6(b) shows the radial distribution function between the hydrogen atoms of the SiOH groups and the nitrogen atoms of the amine compounds. Before the reaction, a broad peak was observed at 0.2 to 3.5 nm, indicating that the amino groups strongly interacted with the SiOH groups through hydrogen bond formation. Because amines segregate at the outermost interface on the substrate side, SiOH–NH2 correlations slightly longer than typical hydrogen-bonding distances were also included in the distribution. However, this peak disappeared after the reaction. This is because the amines were transformed into secondary and subsequently tertiary amines by the reaction, resulting in a reduced charge on the nitrogen atoms and thus weaker interactions with the SiOH groups, as well as their incorporation into the cross-linked structure, which prevented them from freely orienting. This change in hydrogen bonding has little effect on the orientation of DDM, as shown in Fig. 4(c).
Fig. 7(a) shows a snapshot near the interface at a reaction conversion of 87%. In the cured epoxy product, each structure connected by chemical bonds is color-coded, with the blue network spanning the entire system. However, small isolated fragments (low-molecular-weight components not bonded to the main network) and unreacted monomers remain near the interface.57Fig. 7(b) shows a bottom view of the same epoxy product cured to 87% from the substrate side. As indicated by the arrows in the figure, unreacted monomers of epoxy and amine compounds, as well as small isolated fragments, were present at the outermost interface on the substrate side. This is attributed to the lower reaction conversion achieved at the outermost interface on the substrate side, and the presence of excess amines deviating from the stoichiometric ratio. Considering that these species are surrounded by the cross-linked network and that diffusion is suppressed, it is unlikely that further reactions will occur. In fact, MD simulations of the curing reaction were extended up to 10 ns but no further reactions occurred at the interface. Although similar unreacted monomers and isolated fragments can also be observed in the bulk when the reaction conversion is low, they become scarcely visible once the reaction conversion exceeds 80%. However, due to geometric constraints, the reaction conversion cannot reach 100%, and unreacted monomers and small isolated fragments do not completely disappear even in the bulk. In this study, MD simulations were conducted using amorphous silica as the substrate. Even if the properties of the substrate surface are altered, although the strength of hydrogen bonding with the cured epoxy changes depending on its hydrophilicity, the presence of an incompletely cross-linked structure at the outermost interface on the substrate side remains unchanged.26
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| Fig. 7 (a) Snapshot near the interface at 87% reaction conversion. (b) Bottom view of the cured epoxy product. | ||
The molecular configuration shown in Fig. 7, obtained from MD snapshots, was representative of all simulation conducted under different initial conditions. Fig. 8 shows a schematic illustration of the cured epoxy product near the solid interface in the cross-sectional direction, drawn based on the results described above. At the outermost interface on the substrate side, within 1 nm from the substrate, the molecules are oriented in-plane along the substrate, resulting in improved packing and densification. In addition, amine compounds with smaller molecular size segregate, leading to a deviation from the stoichiometric ratio. Near the interface, the reaction proceeds rapidly in the initial stage, up to a reaction conversion of 10%, because the epoxy has more reaction partners. SFG spectroscopy results have also reported faster reactions at the outermost interface on the substrate side, which were explained in terms of the densification and orientation of reactive functional groups.32 However, thereafter, the reaction slows down due to the suppression of molecular motion, resulting in the presence of unreacted epoxy and amine monomers, as well as small fragments that have only slightly reacted, existing in isolation.24 Even if excess amines are incorporated into the main cross-linked structure, many of them react only with functional groups on one side of the molecule due to the limited availability of epoxies as reaction partners. This asymmetry ultimately leads to the formation of dangling chains, defined as epoxy or amine molecules connected to the main network through only one reacted end.57
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| Fig. 8 Schematic illustration of the molecular picture of a cured epoxy product in the vicinity of the solid interface. | ||
Finally, based on the molecular picture of the cured epoxy product at the interface revealed in this study, the relationship with adhesive properties is discussed. When the cured epoxy product is separated from the adherend surface, the main cross-linked structure transfers the applied force. Unreacted monomers and isolated fragments present at the interface are considered to contribute little to adhesion because they are not connected to the main cross-linked structure. Although dangling chains are connected to the main cross-linked structure, they are less effective in resisting deformation. The presence of unreacted monomers, isolated chains, and dangling chains is detrimental to adhesion and is indicative of the formation of a weak boundary layer.62,63 Therefore, material design and control of the curing process are required to reduce such incomplete cross-linked structures. We recently reported that maintaining stoichiometry can reduce isolated low-molecular weight components and dangling chains.57 One approach is to align the molecular sizes of the epoxy and amine compounds to prevent the segregation of amine. The validity of this concept has been supported by our MD simulations and will be experimentally verified in future studies.34
Supplementary information (SI): density profile and relationship between reaction time and molecular orientation. See DOI: https://doi.org/10.1039/d5sm01089f.
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