Open Access Article
Carlos Alarcon-Miranda
abc,
Isis A. Middleton
bc,
Olivia Rusli
b,
Nicolas Caceres-Herrera
a,
Mohan Bhadbhade
d,
Nicole J. Rijs
b,
Pall Thordarson
*bc,
Marcelo J. Kogan
*a and
Claudio Saitz
*ae
aFacultad de Ciencias Químicas y Farmacéuticas Universidad de Chile, Santiago, 8380494, Chile. E-mail: mkogan@ciq.uchile.cl; clsaitz@ciq.uchile.cl
bSchool of Chemistry, The University of New South Wales, Sydney, NSW 2052, Australia. E-mail: p.thordarson@unsw.edu.au
cUNSW RNA Institute, The University of New South Wales, Sydney, NSW 2052, Australia
dMark Wainwright Analytical Centre, The University of New South Wales, Sydney, NSW 2052, Australia
eAdvanced Center for Chronic Diseases (ACCDiS), Universidad de Chile, Santiago, 8380494, Chile
First published on 15th December 2025
We report a series of N-arylsulfonamidocalix[4]arene hosts with tunable acidity and conformational flexibility designed to explore narrow pH-responsive binding. Using two cationic dyes as model guests, we performed a systematic analysis across pH 5.8–10.2 in a 1
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1 (v/v) water
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acetonitrile mixture (χH2O 0.74). Fluorescence experiments confirmed pH- and conformation-dependent affinity, with host Tf-SA4 (bearing the most acidic sulfonamide groups in the cone conformer) inducing a sharp fluorescence enhancement within a narrow range of pHapp 7.8 and 8.2 (ΔpH = 0.4). Detailed analysis revealed a 1
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2 complex with coupled charge and geometry changes in the host that are pH-dependent and induce a steep increase in binding stability, consistent with a proposed “binding switch” over the narrow ΔpH = 0.4. This study introduces a proof-of-concept for a synthetic host with narrow pH responsiveness near neutral pH, offering a foundation for further research into N-arylsulfonamidocalixarenes for potential biomedical applications.
N-arylbenzenesulfonamides (Ar–SO2NH–Ar) are of particular interest in this regard, as they can have different pKa values ranging from 5.7 to 10.2,9,10 by simply varying the substituent electronic nature of the N-aryl moiety. These compounds don't require N-heterocycles to modulate acidity like classical sulfonamides (commonly found in antibiotics and some drug delivery systems), which are known to cause severe allergic reactions in susceptible individuals.11 Additionally, calix[n]arenes are a class of macrocyclic structures (made of n phenol subunits connected by methylene bridges at-ortho positions) used previously in biomedical settings12,13 with excellent synthetic versatility compared with other hosts:14 they can undergo transformations such as electrophilic aromatic substitutions while the phenol moieties can be alkylated or esterified. Calix[4]arenes bearing –SO2NRR' substituents at the -para positions have been previously reported by several research groups.15–18 However, calix[4]arenes functionalized with N-arylsulfonamide groups have only been described twice for anion recognition in their neutral form, either in acetonitrile19 or in heterophasic extraction,20 with no subsequent studies reported to date. These calix[4]arenes can bear tunable ionizable groups with pKa values near neutral pH. Additionally, groups with hydrogen bonding capabilities in the upper rim can alter the host geometry by stabilizing an pinched cone conformer (Scheme 1A), controlling the cavity's availability.21,22 The combination of these features has the potential of modulating the binding of this class of hosts toward cationic guests in a pH-dependent manner, extending our prior work on cation recognition with calix[4]arenes.23,24
In this study, we address the gap in pH-responsive host–guest chemistry by designing N-arylsulfonamidocalix[4]arene hosts with tunable ionization properties in a near-aqueous environment (water mole fraction (χH2O) = 0.74, χCH3CN = 0.26). Through fluorescence assays, NMR, statistical analysis, nESI-MS, and X-ray crystallography, we show that these hosts follow a pH-triggered “binding switch” model, controlled by changes in the ionization state and cavity availability, with a significant increase in stability within a narrow ΔpH = 0.4 between pHapp 7.8 and 8.2 (Scheme 1B). This work highlights the potential of macrocycles to undergo both charge and geometrical changes in response to narrow pH variations, particularly near pH neutrality, offering a new platform for the design of highly responsive supramolecular systems with potential biomedical applications.
The pinched conformer interconverts into another pinched cone through the symmetrical cone. This equilibrium can be shifted to the C2v symmetry by stabilizing the pinching with intramolecular hydrogen bonds between distal substituents at the upper rim.22
To validate the design of Tf-SA4, its ionization and conformational behavior were studied across a pH range of 5.8–10.2 by NMR. Experiments were conducted in a 1
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1 (v/v) mixture of water and deuterated acetonitrile to ensure sufficient solubility of the host across the studied pH range. Although this mixture contains 50% water by volume, the molar fraction of water (χH2O) is 0.74, resulting in a solvent environment in which water-like properties such as polarity and hydrogen bonding networks are largely preserved.25 All reported pH values correspond to the values measured in the aqueous part of the mixture before mixing, termed apparent pH (pHapp, see SI, S1.1 for details). However, due to the reduced dielectric constant relative to pure water, the operational pH scale in this medium is slightly shifted to higher values.26
1H and 19F NMR experiments showed continuous upfield shifts from pHapp 5.8 in the sulfonamide-linked nuclei (Ha, F3, Fig. 1B), indicating a gradual deprotonation of the N-arylsulfonamide groups from pHapp 5.8 to 9.0, with no evidence of distinct deprotonation states (Fig. 1B). This confirmed that the triflyl group in Tf-SA4 provides sufficient acidity to ionize the sulfonamides at near neutral pH as desired.
In parallel, subtle changes were observed in the chemical shifts of the calix[4]arene core protons (Hb and Hc), suggesting an ionization-dependent reorganization of the cone geometry (Fig. 1B). The interconversion between the C4v and C2v symmetries occurs in fast exchange on the NMR time scale at 25 °C, making them difficult to distinguish under standard conditions.22 Nevertheless, conformational insights can be extracted from this data. Notably, Hc initially shifts upfield slightly from pHapp 5.8 to 7.0. Since sulfonamides deprotonation is detected at pHapp ∼6.2, this trend likely reflects a stronger averaged shielding due to the stabilization of the pinched cone geometry by charge-assisted intramolecular hydrogen bonding between a protonated sulfonamide and a negatively charged distal sulfonamide. Above pHapp 7.0, Tf-SA4 gets more ionized and both Hc and Hb move downfield, consistent with a population shift toward a more open, symmetrical cone geometry. This reorganization increases the distance between opposing aromatic rings, reducing their mutual shielding.
To demonstrate the effect of charge in N-arylsulfonamidocalix[4]arene geometry, we obtained crystal structures of H-SA40 (protonated) and Tf-SA4−4 (fully deprotonated). H-SA40 adopts a pinched cone conformation (distances between distal subunits: 5.0 Å, 7.6 Å), stabilized by intramolecular hydrogen bonds between distal sulfonamide groups (N–H⋯O
S, 2.1 Å), including one bridging water molecule (Fig. 1C). In contrast, fully deprotonated Tf-SA−4 (tetrasodium salt) adopts a symmetrical cone conformation (distances between distal subunits: 6.2 Å, 6.8 Å), consistent with coulombic repulsion between the negatively charged sulfonamide groups (Fig. 1D). Together, crystallographic and NMR data show that this class of hosts restricts cavity access in the neutral state and opens it upon full ionization, supporting the geometric rationale behind the molecular design.
The binding capabilities of these hosts at different pH values were studied using a semi-quantitative fluorescence assay employing two dyes used as model cationic guests, 2-DASPI and 4-DASPI (Fig. 2). These dyes were selected for their simple structure, bearing a N-methyl pyridinium core that combines positive charge and hydrophobic character. The pyridinium moiety, with its appropriate size and differing substitution patterns in 2-DASPI and 4-DASPI, provides suitable fluorescent probes that allow the hosts to engage in different potential binding modes.
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Fig. 2 The sharp binding response between pHapp 7.8 and 8.2 for Tf-SA4. Changes in maximum relative fluorescence intensity of (A) 4-DASPI (2 µM, λex 460 nm) and (B) 2-DASPI (2 µM, λex 450 nm) in absence and presence of 50 eq. (0.1 mM) of each host at 12 different pHapp points in the range of 5.8 to 10.2. Solutions were prepared using a 1 : 1 (v/v) H2O : CH3CN mixture (χH2O 0.74), with 10 mM buffer (sodium phosphate buffer for pHapp range 5.8–7.8 and sodium borate buffer for 8.2–10.2). (C) Effect of the water content on the sharp fluorescence enhancement of Tf-SA4 (0.1 mM) over 2-DASPI (2 µM, λex 450 nm) in 1 : 1 (v/v) H2O : CH3CN (light blue line, data from Fig. 2B, χH2O 0.74) and 7 : 3 (v/v) H2O : CH3CN (blue line, χH2O 0.87), from pHapp 7.4–10.2. | ||
The results of this screening assay for each dye are presented in Fig. 2A and B. H-SA4 is the least acidic host and shows practically no response with either dye in the studied pHapp range. CN-SA4 is the second most acidic host and induces a weak fluorescence enhancement in both dyes that peaks at pHapp ≈9.0. Tf-SA4, the most acidic host of the series, induces a sharper and stronger fluorescence response in both dyes also, between pHapp 7.8 and 8.2 and with a maximum relative intensity at around pHapp 8.6 of ≈ 4.5 for 2-DASPI and ≈ 4.0 for 4-DASPI. As a control, the partial cone analogue Tf-SA4m showed no fluorescence change with either dye, reinforcing the importance of the cone conformation in enabling binding-induced response.
To investigate whether the observed pH-dependent binding is linked to the cosolvent system, fluorescence assays with Tf-SA4 and 2-DASPI were performed at both 50% and 70% water by volume (χH2O 0.74 and 0.87, respectively) (Fig. 2C). The sharp enhancement in dye fluorescence intensity induced by Tf-SA4 between pHapp 7.8–8.2 is preserved and even increased in the more aqueous medium, suggesting that the binding behavior arises from specific ionization and conformational changes in the host that respond to pH changes in an aqueous environment. Modest fluorescence enhancements and hypsochromic shifts (SI, Fig. S26–S29) point to partial inclusion of the dye. The response is consistent with the limited fit between host and guest, as full encapsulation would restrict styryl rotation and further enhance fluorescence.
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2 complexes with 2-DASPI of varying strengths at different pHapp valuesThe titrations were completed in triplicate at the different pHapp values, and each dataset was analyzed using the http://supramolecular.org/ (Bindfit)27 web tool. All 9 available models were evaluated to determine the complex stoichiometry (SI, Tables S4–S11) but the fitting results of 2
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1 host–guest models were rejected due to poor fits or non-physical (negative) constants. Results based on 1
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1, 1
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2 full, and 1
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2 non-cooperative models (K1 = 4·K2)28 were compared using the covariance of fit (covfit)29 and Bayesian Information Criterion (BIC)30 values (SI, Table S12) to determine which binding model best described the observed data.31 At all pHapp values, both 1
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2 models gave significantly lower covfit and BIC than the 1
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1 model, supporting higher-order complex formation. As the full and non-cooperative 1
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2 models performed similarly, the simpler non-cooperative model was chosen as the one that best describes this system for its statistical robustness.
The 1
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2 complex stoichiometry was experimentally corroborated by nanoelectrospray ionisation-mass spectrometry (nESI-MS). nESI is a softer ionisation technique than ESI, which helps preserve the binding modes from solution during the ionisation process.32,33 Stoichiometric determination of a host–guest complex is also unambiguous, as MS is very sensitive to m/z changes.34 At pHapp 8.2, both the 1
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1 and the 1
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2 complexes were detected in nESI-MS spectrum, as expected in a stepwise binding process (SI, Fig. S38).
The calculated binding constants for the 1
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2 Tf-SA4·(2-DASPI)2 complex are presented in Table 1. Weak binding is observed at pHapp 7.4 and 7.8, as reflected by low microscopic binding constants (Km = √β12 = √K1K2, allowing straightforward comparison with 1
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1 host–guest systems).29 Between pHapp 7.8 and 8.2, the Km increases 3.9-fold, indicating stronger binding and matching the observed pH range in which the sharp fluorescence response occurs. At pHapp 8.6, however, the binding constant decreases.
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2 (K1 and K2) and microscopic (Km = √β12 = √K1K2) binding constants and the corresponding microscopic Gibbs free energies (ΔGm) between Tf-SA4 and 2-DASPI, as determined by 1H NMR titrations. All values shown are averages with n = 3 (SD = standard deviation)
| pHapp | K1/M−1 (SD) | K2/M−1 (SD) | Km/M−1 | ΔGm/kJ mol−1 |
|---|---|---|---|---|
| 7.4 | 264 (38) | 66 (10) | 130 | −12.1 |
| 7.8 | 381 (100) | 95 (25) | 190 | −13.0 |
| 8.2 | 1480 (430) | 370 (110) | 740 | −16.4 |
| 8.6 | 598 (100) | 150 (25) | 300 | −14.1 |
Notably, the maximum binding detected by NMR occurs at pHapp 8.2, which is shifted from the fluorescence maximum at pHapp 8.6 (Fig. 2). This is likely due to the higher concentrations used in the NMR titration, particularly the buffer (50 mM vs. 10 mM), which increases ionic strength. As shown by Gibb and co-workers, charge screening and ion competition can attenuate binding between charged species.35 In our system, the reduced dielectric constant and sodium competition likely contribute to the decreased NMR binding constants and fluorescence responses observed at high pHapp values. In fact, the fluorescence assay in 70% water from Fig. 2C supports this interpretation, as it shows increased fluorescence responses and less pH-related attenuation (compared to 50% water), due to a higher dielectric constant and therefore, less charge screening.
It is known that water
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acetonitrile mixtures exhibit microheterogeneity (i.e., acetonitrile pockets in the water bulk) across a wide mole fraction range (χCH3CN ≈ 0.1–0.9).25 However, that phenomenon only has significant effect on the ionization of organic acids when the acetonitrile content is above 80% by volume36 (χCH3CN > 0.58, see SI, Fig. S32), a threshold far above the solvent composition employed in our experiments (χCH3CN ≈ 0.26 and 0.13 for 50% and 70% water respectively). The sharp binding transition observed over a narrow ΔpH ≈ 0.4 window in both 50% and 70% water/acetonitrile mixtures and the fact that this was observed using two independent techniques (fluorescence and NMR), confirms that the binding behavior of Tf-SA4 is intrinsic to its molecular properties and not related to the cosolvent system. This highlights the robustness and potential applicability of this new pH-responsive binding mechanism in aqueous environments.
ln(Km) as shown in Table 1 at each pHapp value measured. Between pHapp 7.8 and 8.2, the ΔGm of Tf-SA4 in forming the Tf-SA4·(2-DASPI)2 complex increases by −3.3 kJ mol−1 (∼1.4 kT) corresponding to a 26% enhancement in binding free energy (Fig. 4A). These calculations, NMR experiments, and X-ray structures point to a pH-triggered “binding switch” model. At pHapp 7.4–7.8, Tf-SA4 is partially deprotonated and adopts a pinched cone stabilized by intramolecular hydrogen bonding, which limits cavity availability and yielding weak 1
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2 complexes dominated by electrostatic interactions. As pHapp rises to 8.2, further deprotonation shifts the host toward a symmetrical cone, opening the cavity by charge repulsion and enabling stronger binding through both electrostatic and hydrophobic interactions. Crystallographic data from Tf-SA4−4 (SI, Fig. S24) show that, in its fully deprotonated state, the host cavity is accessible and capable of accommodating small molecules such as methanol. Following this rationale, nESI-MS at pHapp 8.2 detects complexes with the host in the 3− and 4− ionization states, indicating that a higher degree of deprotonation correlates with complexation. (SI, Fig. S39). To further support this model, a NOESY NMR experiment was acquired at pHapp 8.2 (Fig. 4B). The 2D spectrum revealed spatial proximity (<5 Å) between the pyridinium moiety of 2-DASPI and the host cavity, which is consistent with its inclusion. The compilation of these experimental observations reveals that the conformational change triggered by pH modulates access to the binding site.
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Fig. 4 (A) There is a 26% increase (−3.3 kJ mol−1 or 1.4 kT) in complex stability from pHapp 7.8 and 8.2. Measured by the changes in microscopic Gibbs free energy (ΔGm) from the corresponding microscopic binding constant Km (Table 1) for the 1 : 2 non-cooperative stepwise equilibria between Tf-SA4 and 2-DASPI. (B) Partial NOESY NMR (600 MHz, 278 K) spectrum of Tf-SA4 (1 mM) and 2-DASPI (4.5 mM) at pHapp 8.2 (sodium borate buffer 50 mM) in 1 : 1 (v/v) H2O : CD3CN (χH2O 0.74). 2-DASPI, through the pyridinium moiety, interacts with calix[4]arene cavity (Hb proton). Hp1 and Hp3 show the strongest NOE interaction (based on crosspeaks normalized integration), followed by Hp4, consistent with the proposed binding mode displayed on the left side of the spectrum. No intermolecular NOE contacts were detected in the lower rim of the host. | ||
To put this pH-responsiveness in context and with pH-controlled release applications in mind, there are few examples of acidic hosts for which binding constants to cationic guests have been measured across therapeutically relevant pH ranges. In studies employing WP6 (pillar[6]arene with 12 carboxylic acids) and dicationic guest paraquat, binding constant decreases of about one order of magnitude have been reported37 between pH 7.8 and 4.8, equivalent to a ≈17% loss in complex stability (SI, Table S13). However, because the pH scale is logarithmic, a ΔpH of 3 in that range actually corresponds to a 1000-fold increase in proton concentration ([H+]), far larger than the ΔpH value alone might suggest.
In contrast, in a narrow ΔpHapp 0.4 window (pHapp 8.2 to 7.8), Tf-SA4 is capable of reducing its complex stability with a cationic guest by 21% in response to just a ≈2.5-fold increase in [H+]. This responsiveness is particularly promising given that tumor tissues typically exhibit only a ΔpH 0.3–0.7 relative to normal tissue near neutral pH,1 precisely where our system demonstrates maximum responsiveness. This ability to respond to physiologically relevant pH changes, rather than requiring the larger pH shifts needed by existing systems, positions our work as a compelling prototype for advancing pH-controlled release mechanisms through calixarene chemistry. Future research will focus on exploiting their synthetic versatility into developing more sensitive, fully water-soluble hosts or conjugable analogues that can be attached to drug delivery platforms to enable direct biomedical applications.
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2 complexes with 2-DASPI, with measurable variations in stability as a function of pH. The observed behavior arises from a proposed pH-triggered “binding switch”, where synergy between host ionization and geometric reorganization, offers a strategy to finely tune pH-dependent binding through structural design. This work establishes a proof-of-concept for highly pH-responsive host–guest systems using N-arylsulfonamidocalix[4]arenes and provides a basis for developing functional macrocycles with physiologically relevant, narrow pH responsiveness, suited for biomedical applications.
The data supporting this article have been included as part of the supplementary information (SI). Supplementary information: synthetic procedures, NMR spectra of all compounds, crystallographic data and NMR titration data. See DOI: https://doi.org/10.1039/d5sc07965a.
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