Open Access Article
Neda Farzizadeh
a,
Zahra Najmi
*bc,
Morteza Amoozgard,
Mona Aminbeidokhtie,
Amirali Haririf,
Arezoo Khosravigh,
Siavash Iravani
*i and
Ali Zarrabi
*j
aDepartment of Midwifery, School of Nursing and Midwifery, Ardabil University of Medical Sciences, Ardabil, Iran
bGraduate School of Biomedical Sciences, Clinical and Translational Science Department, Tufts Medical Center, Boston, MA, USA. E-mail: zahra.najmi@tuftsmedicine.org
cAssociate Professor of Obstetrics and Gynecology, Fellowship in Minimally Invasive Surgery, Zanjan University of Medical Sciences, Zanjan, Iran
dCEO, March Health Company, Concord, CA 94521, USA
eDepartment of Pathology, University of California San Francisco, San Francisco, CA 94143, USA
fDepartment of Pharmaceutical Biotechnology, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan 8174673461, Iran
gDepartment of Genetics and Bioengineering, Faculty of Engineering and Natural Sciences, Istanbul Okan University, Istanbul 34959, Turkey
hGraduate School of Biotechnology and Bioengineering, Yuan Ze University, Taoyuan 320315, Taiwan
iIndependent Researcher, W Nazar ST, Boostan Ave, Isfahan, Iran. E-mail: siavashira@gmail.com
jDepartment of Biomedical Engineering, Faculty of Engineering and Natural Sciences, Istinye University, Istanbul 34396, Turkey. E-mail: alizarrabi@gmail.com; ali.zarrabi@istinye.edu.tr
First published on 21st April 2026
MicroRNAs (miRNAs), a category of small (18–25 nucleotides) non-coding transcripts that modulate gene expression at the post-transcriptional level, are necessary for regulatory processes in female reproduction, specifically in ovarian function and follicular development. Dysregulation of these miRNAs is implicated in reproductive disorders like PCOS, endometriosis, and gynecological cancers. Nanotechnology in medicine encompasses the study of the properties and uses of nanomaterials to enable the development of more precise therapeutic techniques, including biosensing and diagnostics, targeted medication delivery, and tissue engineering. In this review, the recent advancements in utilizing nano-based technologies accompanied by miRNAs, including polymeric nanostructures, metallic nanoparticles (NPs), extracellular vesicle (EV) mimetics, DNA-based nanostructures, and lipid-based nanostructures, to treat conditions like endometriosis and PCOS or breast, cervical, and ovarian cancers and their limitations are discussed. Despite the reported improvements, clinical translation is hampered by challenges related to long-term stability, scalability, and immune recognition. Future research should focus on improving hybrid nanocarrier systems and miRNA-based precision medicine to improve treatment outcomes for women's health.
miRNAs are a category of small (18–25 nucleotides) non-coding transcripts that modulate gene expression at the post-transcriptional level.5 The enzymes DiGeorge syndrome critical region 8 (DGCR8) and Drosha ribonuclease III (DROSHA) cleave primary miRNAs (pri-miRNAs) to produce precursor miRNAs (pre-miRNAs).6,7 Pre-miRNAs are transported to the cytoplasm by exportin 5 and then they are processed further to produce an miRNA duplex. The guide strand creates an RNA-induced silencing complex (RISC), accompanied by Argonaute proteins. miRNAs, through their interaction with the 3′-untranslated region (3′-UTR), promote post-transcriptional gene silencing by driving translational repression or messenger RNA (mRNA) degradation.8,9 Fig. 1 demonstrates the biogenesis of miRNAs and their role in the post-transcriptional level of gene expression.
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| Fig. 1 Biogenesis of microRNAs (miRNAs) and their role in the post-transcriptional level of gene expression. | ||
miRNAs are necessary for regulatory processes in female reproduction, specifically in ovarian function and follicular development; for example, miR-21 is expressed at high levels in mammalian ovaries and is critically associated with embryo development. It inhibits the apoptosis in cumulus and granulosa cells by activating the phosphatidylinositol 3-kinase/protein kinase B (PI3K/Akt) pathway and reducing the cleaved cysteine–aspartic acid protease 3 (caspase-3) levels.10 In mice, although miR-21 overexpression impairs cumulus expansion and reduces glutathione-S-transferase (GSH), it improves fertilization and blastocyst rates. Conversely, inhibiting miR-21 increases expansion and GSH but harms embryo development.11
Other miRNAs also regulate vital hormone receptors; for example, the expression of miR-34a negatively correlates with the follicle-stimulating hormone receptor (FSHR) during anestrus, and miR-let-7c inversely correlates with the estrogen receptor beta (ESR2) throughout the ovarian cycle.12 Moreover, miR-339-5p overexpression impairs oocyte maturation and blastocyst formation by reducing extracellular signal-regulated kinases 1 and 2 (ERK1/2) phosphorylation.13 In follicles, different expressions of miR-135a promote apoptosis and cell cycle arrest by targeting the transforming growth factor beta receptor 1 (TGFBR1) and cyclin D2 (CCND2). ESR2 directly suppresses the miR-135a transcription, revealing a pro-survival axis (ESR2/miR-135a/TGFBR1/CCND2).14 Furthermore, miR-20b and miR-31 target hydroxysteroid 17-beta dehydrogenase 14 (HSD17B14), altering steroid hormone conversion—estradiol to estrone—and impacting granulosa cell apoptosis. miR-20b reduces apoptosis, while miR-31 (which also targets FSHR) promotes it.15 In goats, miR-202-5p inhibits granulosa cell proliferation and promotes apoptosis, whereas miR-450-5p promotes proliferation by targeting B-cell lymphoma 2 (Bcl2) modifying factor (BMF) and Bcl2 genes, impacting Akt and adenosine monophosphate (AMP)-activated protein kinase (AMPK) signaling, respectively.16 Fig. 2 demonstrates the role of miRNAs in ovarian function and follicular development.
Given their fundamental roles in folliculogenesis, oocyte maturation, steroidogenesis, and cell survival/apoptosis, dysregulation of these miRNAs is implicated in reproductive disorders, like polycystic ovary syndrome (PCOS), endometriosis, and gynecological cancers.5,17–19 These findings demonstrate the potential of miRNA-based therapeutic technologies in disease treatment and diagnosis. This has led to the development of synthetic miRNAs as potential therapeutic tools for restoring normal physiological levels of miRNA expression in a variety of illnesses. When low miRNA expression is the cause of a disease, miRNA mimics can bring miRNA levels up to normal, and antimiRNAs (antagomirs) can prevent disease-causing overexpressed miRNAs by preventing miRNAs from binding to their mRNA targets.20–22 To address these therapeutic methods, there is a need for nano-based technologies that can regulate miRNA levels that are dysregulated in diseases. In this review, we discuss the role of miRNAs in gynecological diseases and recent advancements in miRNA-based diagnostic and therapeutic pathways in nanotechnology.
Different miRNAs have been reported to be expressed differentially in endometriosis; for example, apoptosis of endometriotic cyst stromal cells (ECSCs) is aided by miR-503.25 In addition, miR-200c was identified as significantly downregulated in ectopic endometrial tissues;26 in contrast, miR-199a-3p, miR-1-3p, miR-146a-5p, and miR-125b-5p were upregulated.27 Additionally, miRNAs such as miRNA-31, miRNA-144, and miRNA-145 have emerged as critical determinants in the initiation of endometriosis. Increased levels of miR-1304-3p, miR-544, and miR-3684 and decreased levels of miR-3935 and miR-4427 affected signaling pathways such as nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB), mitogen-activated protein kinase (MAPK), and wingless/integrated-beta-catenin (Wnt/β-catenin).28 Fig. 3 demonstrates the role of miRNAs in the initiation and advancement of endometriosis.
Folliculogenesis, steroidogenesis, and cellular adhesion are important pathways that miRNA modulates and are believed to play a role in the pathophysiology of PCOS.32 For example, miR-223-3p was recognized as an essential regulator of insulin, inflammation, and autophagy pathways in PCOS.33 A positive correlation was observed between miRNA-125a-5p expression and low-density lipoprotein (LDL) levels in the PCOS group; miRNA-125a-5p was involved in regulating cholesterol biosynthesis, glycolysis, insulin receptor signaling, oxidative stress-induced senescence, and estrogen-dependent gene expression.34 Besides, miR-93 and miR-216a levels were inversely associated with dipeptidyl peptidase 4 (DPP4) serum concentrations, which play a role in blood sugar regulation. miR-320a levels were significantly lower in PCOS patients.35 Long non-coding RNA (lncRNA) of small nucleolar RNA host gene 12 (lncRNA SNHG12) overexpression was found to influence pathological alterations in PCOS rats using an insulin-treated KGN granulosa-like tumor cell model and a dehydroepiandrosterone (DHEA)-induced PCOS rat model. Furthermore, it suppressed the expression of miR-129 and miR-125b, while lncRNA SNHG12 had the opposite effect. In cell experiments, silencing the lncRNA SNHG12 decreased cell viability, inhibited proliferation, and increased apoptosis. Further analysis using a pull-down assay demonstrated that lncRNA SNHG12 interacted with miR-129 and miR-125b, confirming their binding sites.36
000 women globally receive an ovarian cancer diagnosis each year, resulting in 207
000 fatalities,40 and it remains the most lethal gynecological cancer.41 A wide variety of investigated dysregulated miRNAs in ovarian cancer; miRNAs like miR-141, miR-182, miR-200a, miR-20, miR-223, and miR-1246 were upregulated in ovarian cancer cells by promoting tumor growth, metastasis, and treatment resistance to cisplatin and paclitaxel.42–48 In contrast, miRNAs like the let-7 family were downregulated by tumor suppression through downregulation of Kirsten rat sarcoma viral oncogene homolog (KRAS) and cellular myelocytomatosis oncogene (c-Myc).49 Overexpression of miR-449a and miR-34b inhibited cancer-associated processes by upregulating the tumor suppressor gene TP53 and downregulating oncogenes, such as hypoxia-inducible factor 1-alpha (HIF-1α), vascular endothelial growth factor (VEGF), c-Myc, cyclooxygenase-2 (COX-2), and tumor necrosis factor-alpha (TNF-α).50 Additionally, miR-200a-3p, miR-1246, miR-203a-3p, and miR-23b-3p had higher expression levels nearer the diagnosis, with miR-200a-3p exhibiting statistically significant upregulation.51 miR-203a, miR-96-5p, miR-10a-5p, miR-141-3p, miR-200c-3p, miR-182-5p, miR-183-5p, and miR-1206 were consistently expressed in both high-grade serous ovarian cancer (HGSOC) cell lines and formalin-fixed paraffin-embedded human ovarian tumor samples.52 It is reported that overexpression of osteoglycin (OGN) in cancer-associated fibroblasts (CAFs) reduced ovarian cancer cell viability. One miRNA that has been found to target and inhibit OGN expression is miR-1290.53 Besides, upregulation of miR-10a-5p inhibited ovarian cancer cell proliferation by reducing GATA-binding protein 6 (GATA6) expression.54 Additionally, it is found that GATA6 was negatively correlated with miRNA-10a-5p in ovarian cancer tissues and cells.54 Moreover, miR-7704 was significantly downregulated in cisplatin-resistant ovarian cancer cells compared to parental cells. The ectopic expression of miR-7704 produced effects similar to interleukin-2 receptor subunit beta (IL2RB) knockdown.55 Mechanistically, miR-7704 inhibited ovarian cancer progression by regulating IL2RB expression.56 Fig. 4 demonstrates the role of miRNAs in ovarian cancer development and treatment response.
000 new cases of cervical cancer were reported in 2022, making it the fourth most common cancer diagnosed in women worldwide, leading to serious health challenges.57,58 The mechanisms of miRNA dysregulation and their expression patterns in cervical cancer have been clarified by a number of studies; for example, miR-124-3p, miR-143, miR-145, miR-424, miR-491-5p, miR-494, miR-494, miR-497, and miR-544 suppressed tumors by increasing cell cycle arrest and decreasing proliferation.7,59–63 Additionally, miR-1246, miR-221, miR-93-5p, miR-10a, and miR-17-5p stimulate tumors to grow.64–68 Furthermore, the expression of lncRNA H19 increased in cervical cancer cells. miR-140, interacting with lncRNA H19, which is primarily found in the nucleus, was downregulated in cervical cancer cells. The effects of lncRNA H19 knockdown on cervical cancer cell development were reversed by inhibiting miR-140. miR-140 inhibited aldehyde dehydrogenase 1 family member A1 (ALDH1A1), and lncRNA H19 knockdown decreased ALDH1A1 expression.69 Moreover, it was found that miR-145 negatively correlated with metabolic reprogramming-related genes and inhibited the proliferation and metastasis of cervical cancer cell lines by disrupting aerobic glycolysis, a hallmark of cancer cell metabolism. miR-145 directly binds to the 3′-UTR of the myelocytomatosis oncogene (Myc). Additionally, Myc regulates glycolysis-related genes. In vivo experiments revealed that miR-145 mimics significantly suppressed cervical cancer xenograft tumor growth, prolonged the survival time of mice, and reduced the expression of the tumor proliferation marker Ki-67.70 It has been reported that overexpressing miRNA-143 enhances cisplatin-induced apoptosis linked to the modulation of apoptosis-related genes, such as Bcl2, Bcl2-associated X protein (Bax), and caspase-9, induces cell cycle arrest at the G1 and G2/M phases, activates autophagy, and inhibits cell migration by downregulating vimentin and downregulating c-Myc oncogene.71
000 female breast cancer deaths and 2.3 million new cases were reported worldwide in 2022.72 Deep sequencing and profiling of miRNAs have shown significant miRNA dysregulation in breast cancer in recent years.73 For example, it is found that miR-25-3p, miR-29a-5p, miR-105-3p, and miR-181b1-5p were upregulated whereas miR-335-5p and miR-339-5p were downregulated in tumor tissues. The expression of these miRNAs was associated with Tumor–Node–Metastasis (TNM) stages and Human Epidermal Growth Factor Receptor 2 (HER-2) status, except for miR-105-3p and miR-339-5p.74 Both miR-450a-5p and miR-181a-3p were upregulated in the serum of breast cancer patients. In contrast, miR-450a-5p also showed elevated expression but did not display the same level of clinical relevance.75 It is found that miR-21, miR-155, miR-23a, miR-130a, miR-145, miR-425-5p, and miR-139-5p were significantly upregulated, while miR-451 was downregulated in patients with early invasive ductal carcinoma (IDC) patients.76 Targeting acyl-CoA synthetase long-chain family member 4 (ACSL4), which contributes to doxorubicin (DOX) resistance by controlling the drug extrusion pump adenosine triphosphate (ATP)-binding cassette subfamily G member 2 (ABCG2), miR-449 dysregulates fatty acid metabolism.77 Inhibiting miR-1307-3p significantly reduces cell proliferation, migration, invasion, and angiogenesis by regulating protamine 2 (PRM2) expression.78Table 1 summarizes miRNAs and their regulation in endometriosis, PCOS, and gynecological cancers (ovarian, cervical, and breast cancers).
| miRNA | Sample type | Up-/down-regulation | Ref. | |
|---|---|---|---|---|
| Endometriosis | miR-503 | Endometrial tissue | Downregulated | 26 |
| miR-200c | Endometrial tissue | Downregulated | 26 | |
| miR-144 | Endometrial tissue | Upregulated | 28 | |
| miR-145 | Endometrial tissue | Upregulated | 28 | |
| miR-1304-3p | Endometrial tissue | Upregulated | 28 | |
| miR-544 | Endometrial tissue | Upregulated | 28 | |
| miR-3684 | Endometrial tissue | Upregulated | 28 | |
| miR-3935 | Endometrial tissue | Downregulated | 28 | |
| miR-4427 | Endometrial tissue | Downregulated | 28 | |
| miR-199a-3p | Endometrial tissue | Upregulated | 27 | |
| miR-1-3p | Endometrial tissue | Upregulated | 27 | |
| miR-146a-5p | Endometrial tissue | Upregulated | 27 | |
| miR-125b-5p | Endometrial tissue | Upregulated | 27 | |
| PCOS | miR-223-3p | Granulosa cells samples | Upregulated | 33, 79 and 80 |
| miR-93 | Serum | Downregulated | 35 | |
| miR-216a | Serum | Downregulated | 35 | |
| miR-320a | Serum | Downregulated | 35 | |
| Ovarian cancer | miR-141 | Ovarian cancer cell | Upregulated | 42–48 |
| miR-182 | Ovarian surface, fallopian tube secretory cells, and malignant ovarian cell lines | Upregulated | 42–48 | |
| miR-200a | Ovarian adenocarcinoma cell lines | Upregulated | 42–48 | |
| miR-223 | Tumor-associated macrophages | Upregulated | 42–48 | |
| miR-1246 | Ovarian cancer cells | Upregulated | 42–48 | |
| Let-7 family | Ovarian cancer cells | Downregulated | 49 and 81 | |
| miR-449a | Endometrial and ovarian cancer cells | Downregulated | 50 | |
| miR-34b | Endometrial and ovarian cancer cells | Downregulated | 50 | |
| miR-203a-3p | Serum | Upregulated | 51 | |
| miR-23b-3p | Serum | Upregulated | 51 | |
| miR-1290 | Cancer-associated fibroblasts | Upregulated | 53 | |
| miR-10a-5p | Ovarian tumor samples | Upregulated | 52 | |
| miR-7704 | Ovarian cancer cells | Downregulated | 56 | |
| Cervical cancer | miR-124-3p | Cervical cancer cells | Downregulated | 7 and 59–63 |
| miR-143 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-145 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-424 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-491-5p | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-494 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-497 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-544 | Cervical cancer cells | Downregulated | 7 and 59–63 | |
| miR-1246 | Cervical cancer cells | Upregulated | 64–68 | |
| miR-221 | Blood and cervical cancer cells | Upregulated | 64–68 and 82 | |
| miR-93-5p | Cervical cancer cells | Upregulated | 64–68 | |
| miR-10a | Cervical cancer cells | Upregulated | 64–68 | |
| miR-17-5p | Cervical cancer cells | Upregulated | 64–68 | |
| miR-140 | Cervical cancer cells | Downregulated | 69 | |
| miR-141-5p | Cervical cancer cells | Upregulated | 83 | |
| miR-34a | Cervical cancer cells | Downregulated | 84 | |
| Breast cancer | miR-25-3p | Breast cancer cells | Upregulated | 74 and 85 |
| miR-29a-5p | Breast cancer cells | Upregulated | 74 | |
| miR-105-3p | Breast cancer cells | Upregulated | 74 | |
| miR-181b1-5p | Breast cancer cells | Upregulated | 74 | |
| miR-335-5p | Breast cancer cells | Downregulated | 74 | |
| miR-339-5p | Breast cancer cells | Downregulated | 74 | |
| miR-574-5p | Breast cancer cells | Upregulated | 86 | |
| miR-450a-5p | Serum | Upregulated | 75 | |
| miR-181a-3p | Serum | Upregulated | 75 | |
| miR-21 | Breast cancer cells | Upregulated | 76 | |
| miR-155 | Breast cancer cells | Upregulated | 76 | |
| miR-23a | Breast cancer cells | Upregulated | 76 | |
| miR-130a | Breast cancer cells | Upregulated | 76 | |
| miR-425-5p | Breast cancer cells | Upregulated | 76 | |
| miR-139-5p | Breast cancer cells | Upregulated | 76 | |
| miR-451 | Breast cancer cells | Downregulated | 76 | |
| miR-449a | Breast cancer cell lines | Downregulated | 77 | |
| miR-449b-5p | Breast cancer cell lines | Downregulated | 77 | |
| miR-449c-5p | Breast cancer cell lines | Downregulated | 77 | |
| miR-1307-3p | Breast cancer cell lines | Upregulated | 78 |
Farhana et al. synthesized AuNPs by using the trisodium citrate method. These NPs were introduced into MCF-7 cells and were non-toxic up to a concentration of 0.6 µg mL−1. The main therapeutic mechanism was that AuNPs significantly increased the expression of hsa-miR-204-5p, which bound to the 3′-UTR regions of matrix metalloproteinase-9 (MMP-9) mRNA, inhibiting MMP-9 mRNA expression and protein secretion. This pathway was also associated with the suppression of the phorbol 12-myristate 13-acetate (PMA)-induced inflammatory activation of the transcription factor NF-κB p65. However, it should be noted that only MCF-7 breast cancer cells were used, and no animal models or clinical samples were examined to confirm their therapeutic effect in vivo. The evaluations were conducted for 72 hours, so the long-term effects and potential toxicity of the AuNPs remained unknown. In addition, a PDI value of 0.435 indicated a non-uniform size distribution of the NPs. Although AuNPs were reported to be non-toxic at low doses, systemic toxicity and off-target effects were not investigated. Additionally, the results were limited to estrogen receptor-positive breast cancer cells, and the effects on other breast cancer subtypes were not determined.110
Chaudhari et al. designed a PEG-capped AuNP system synthesized with diethylpyrocarbonate (DEPC) for miRNA-206 delivery to target Luminal-A type breast cancer cells. In this study, it was shown that PEGylated AuNPs played an active role in the biological function of miR-206. The attachment of NH2-PEG-SH to the AuNP surface increased the hydrodynamic size and changed the zeta potential from negative to positive, which allowed for the electrostatic binding of miR-206 through the interaction of the amino groups of PEG with the phosphate groups of miRNAs. The stable formation of the miRNA-PEG-AuNP nanocomplex was confirmed by a further increase in size and change in zeta potential, and the miRNA loading efficiency increased in a time-dependent manner and reached saturation after 24 hours. It showed a binding efficiency plateau (BEP) of around 76% at 24 hours and significant cytotoxicity in MCF-7 breast cancer cells, reducing cell viability by over 80% after 48 hours in a dose-dependent manner by inducing G0/G1 phase arrest, S and G2/M phase reduction and activating apoptosis pathways through upregulation of pro-apoptotic Bax, downregulation of anti-apoptotic Bcl2, and suppression of NOTCH. Functional studies showed that these effects were exerted through the activation of the mitochondrial-dependent apoptosis pathway, as evidenced by decreased mitochondrial membrane potential, increased Annexin V-positive cells, increased Bax expression, and decreased Bcl2 expression. However, it should be noted that the study did not assess caspase-6 and -7, leaving the exact apoptosis mechanism partially unresolved, and that the therapeutic efficacy and biosafety were only tested in MCF-7 cells, without in vivo validation or testing in other cancer cell lines. Additionally, the present BEP may be insufficient for certain therapeutic applications. Moreover, the lack of pharmacokinetic or biodistribution data to assess how the system behaves in systemic circulation, uptake in other tissues, or clearance was another limitation of the study.111
An MSN/NP-based nanodevice was developed for the targeted delivery of miR-200c-3p. miR-200c-3p was acquired from Guangzhou RiboBio CO (Guangzhou, China). The final nanodevice (MSN-PEI-miR200c-HA) was prepared using a layer-by-layer procedure on the core of the MSN. A major challenge for miRNA carriers is being degraded in endosomes or lysosomes. To overcome this, polyethylenimine (PEI) was included; PEI becomes protonated when exposed to acidic pH inside endosomes or lysosomes, and it induces a proton sponge effect, which drives the NPs to escape from the endosomes or lysosomes into the cytoplasm. This ensures that the payload is delivered functionally. It showed an efficient miRNA loading with 99% binding and an efficient endosomal escape. In vitro studies confirmed this by showing the rapid release of a labeled miRNA mimic in lysosomal extract and, subsequently, the dispersion of the miRNA throughout the cytosol after 45 minutes of incubation with cells. As an active targeting mechanism, the outer hyaluronic acid (HA) coating targets the CD44 receptor, which is highly overexpressed in breast cancer cells and is involved in tumor progression. In vitro tests showed significantly higher uptake in CD44-high MDA-MB-231 cells compared to CD44-negligible OE19 cells. Delivery of miR-200c-3p resulted in induction of cell cycle arrest in the G2 phase and significant reduction in tumor size and metastasis in vivo with no observable toxicity confirmed by renal, hepatic, and body weight assessments. Upregulation of miR-200c-3p and downregulation of zinc finger E-box-binding homeobox 1 (ZEB1) and ZEB2 (master regulators of the epithelial to mesenchymal transition [EMT] involved in tumor progression, drug resistance, and metastasis) were confirmed in tumors, which shows the efficient delivery of functional miR-200c-3p in vivo. In biological fluids, NPs showed partial aggregation around 400 nm in hydrodynamic size after 1 hour. Despite effective tumor targeting, NPs accumulated not only in tumors but also in the lungs, spleen, liver, and kidneys, which could affect long-term safety. The miRNA content in the final NPs was 0.7 wt%, which can limit the dosing capacity. Although PEI facilitated endosomal escape, it was associated with dose-dependent cytotoxicity in many systems. NPs were stable in water but showed size increase in the culture medium, indicating that their physiological stability could be compromised and might need further formulation tuning. However, the study focused on xenografts that result in other cancer types, or patient-derived xenografts remain untested (Fig. 5 and 6).112
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| Fig. 5 Effects of the MSN-PEI-miR200c-HA on EMT, invasion, migration, stem-like properties, colony formation, and the cell cycle. The MDA-MB-231 cells were treated with MSN-PEI-HA or MSN-PEI-miR-200c-HA for 72 h (20 µg mL−1) and untreated cells (control) were also included. (A) Protein expression levels of E-cadherin, N-cadherin, fibronectin, β-catenin, vimentin, and GAPDH. (B and C) Invasion and migration assays: representative images (scale bar = 100 µm) (B) and quantification profiles (mean ± SD) (C). (D) Protein expression levels of Nanog, Oct-4A, Sox2, and GAPDH. (E and F). Colony formation assays: representative images (E) and quantification profiles (mean ± SD) (F). (G) Cell proliferation analysis (mean ± SD). (H and I) Cell cycle analysis by flow cytometry: quantifications (mean ± SD) (H) and representative cell cycle profiles (I). OD: optical density and *p < 0.05; **p < 0.01; ***p < 0.001; and ****p < 0.0001. Reprinted with permission from ref. 112 ACS Applied Materials & Interfaces, licensed under CC BY 4.0. | ||
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| Fig. 6 Antitumor activity of MSN-PEI-miR200c-HA in vivo. (A) Tumor growth rate in mice treated with PBS, MSN-PEI-HA, and MSN-PEImiR200c-HA (mean ± SEM, N = 27). (B) Representative images of the Ki-67 (scale bar = 50 µm) and H&E (scale bar = 100 µm) staining of the tumor sections. (C) miR-200c-3p expression in xenograft tumors determined by qRT-PCR (mean ± SEM). (D) Protein expression levels of ZEB1, ZEB2, and GAPDH in xenograft tumors. (E) hHPRT expression relative to mGAPDH in lung tissue determined by qRT-PCR (mean ± SEM). *p < 0.05; **p < 0.01; ***p < 0.001; and ****p < 0.0001. Reprinted with permission from ref. 112 ACS Applied Materials & Interfaces, licensed under CC BY 4.0. | ||
Bose et al. investigated the use of urokinase-type plasminogen activator (uPA) peptide-functionalized extracellular vesicles (EVs) to enhance the tumor-targeting ability of polymeric nanocarriers (PNCs) loaded with antimiRNA-21 or antimiRNA-10b. Cy5-labeled anti-miR-21, anti-miR-21, and anti-miR-10b RNA oligonucleotides were obtained from the PAN Facility at Stanford University. Antisense miRNA-21 and antimiRNA-10b were encapsulated within biodegradable poly(lactic-co-glycolic acid) (PLGA) NPs to protect them from degradation and enable prolonged intracellular availability, thereby restoring tumor suppressor signaling and suppressing invasion- and metastasis-associated pathways. Surface functionalization with EVs derived from 4T1 triple-negative breast cancer (TNBC) cells preserved native cancer cell adhesion molecules that mediated homologous tumor recognition and preferential uptake by TNBC cells. The EV membrane coating also reduced the burst release of antisense miRNAs from the PLGA core, which led to sustained gene silencing. When combined with low-dose DOX, which transiently slowed cell-cycle progression, this platform achieved synergistic antiproliferative effects by extending the functional window of miRNA-mediated pathway inhibition. Encapsulation efficiencies of antimiRNA-21 and antimiRNA-10b were 70% ± 5% and remained consistent across batches (65–75%). The plasminogen activator (PA) nanococktail combined with low-dose DOX produced a 2.8-fold higher antiproliferative effect compared with DOX alone and a 3.2-fold increase relative to untreated controls (P < 0.01). At the end of the study, 40% (4/10) of the mice exhibited complete tumor elimination. Notable accumulation of antimiRNAs in the liver, spleen, and kidneys suggested incomplete tumor specificity; therefore, long-term safety and immunogenicity were not assessed. Co-loading of multiple antimiRNAs and DOX presented challenges in achieving synchronized, controlled release although partial success was achieved.113
Schilb et al. created integrin-targeted, PEGylated lipid NPs composed of an Arg-Gly-Asp (RGD) peptide for receptor-mediated cellular uptake, PEG for steric stabilization and prolonged circulation, and a pH-responsive ionizable (1-aminoethyl)iminobis[N-oleicylcysteinyl-(aminoethyl)propionate] (ECO) lipid that enables electrostatic nucleic acid complexation and efficient intracellular release. Human miR-200c duplex and negative control small interfering RNA (siRNA) duplex were purchased from Integrated DNA Technologies (IDT, Coralville, IA). Self-assembly of RGD-PEG-MAL, the amphiphilic lipid ECO, and an immobilized miR-200c bistrand (nitrogen-to-phosphate ratio [N/P] = 8) resulted in uniformly sized, positively charged NPs with high miRNA encapsulation efficiency. RGD modification significantly enhanced cellular internalization and led to efficient cytosolic translocation, as demonstrated by confocal microscopy and a >360-fold increase in intracellular fluorescence within 4 hours. Stable transfection resulted in a prolonged elevation of miR-200c levels for up to 14 days, enabling effective suppression of targets associated with EMT, including ZEB1, B lymphoma mo-mlv insertion region 1 homolog (BMI1), survivin, and fibronectin, as well as the oncofetal extracellular matrix isoform extradomain B fibronectin (EDB-FN). miR-200c replacement reduced the migration, invasion, and 3D spheroid growth of TNBC cells. In orthotopic TNBC xenograft models, weekly systemic administration of RGD-PEG-ECO/miR-200c NPs significantly inhibited tumor progression without detectable toxicity, while molecular magnetic resonance (MR) imaging with the EDB-FN-targeted contrast agent, ZD2-N3-Gd(HP-DO3A) (MT218), confirmed treatment-associated remodeling of the tumor microenvironment. Within 24 hours, miR-200c levels in MDA-MB-231 cells rose almost 1000 times, remained at high expression for 4 days, dropped to 80 times by day 7, and stayed 30 times higher than controls for 14 days. Additionally, Hs578T cells showed a notable upregulation, with increases of 50–100 times at 48 hours. The expression of ZEB1 mRNA decreased by 40% in Hs578T cells and 57% in MDA-MB-231 cells. Survivin levels fell by 25% and 64%, while BMI1 expression fell by 15% and 35%, respectively. In contrast to the around 3-fold increase in control-treated tumors, tumor volumes in MDA-MB-231 xenografts stayed relatively stable (76.1 ± 15.2 mm3 to 111.4 ± 22.1 mm3, P > 0.05). In Hs578T xenografts, treated tumors showed markedly slower progression, whereas control tumors grew 2.2 times. Besides the positive results, the study had a number of limitations. The first was the temporary character of miR-200c expression, which dropped precipitously by day 7 and only moderately by day 14, requiring weekly systemic administration to maintain therapeutic effects. Another limitation was the variation in the response pattern of TNBC cell lines; the treatment of highly aggressive TNBC subtypes may be limited considering that Hs578T cells are more aggressive, which showed relatively lower suppression of EDB-FN and smaller tumor volume reductions. In vivo, total tumor regression was not achieved, particularly in Hs578T models, where treatment-induced residual EDB-FN expression persisted. Additionally, one mouse in the treatment group unexpectedly died despite the absence of any obvious toxic effects, underscoring the need for more comprehensive safety assessments. The use of preclinical murine models, which might not fully capture the biology of human TNBC, presents another difficulty.114
Albakr et al. created a nanoliposome (NL) with miR-1296 (NL-miR-1296). Cationic nanoliposomes containing 1,2-dioleoyl-3-trimethylammonium-propane (DOTAP) were designed to deliver miR-1296 via electrostatic interaction and provided high encapsulation efficiency and formation of unilamellar vesicles with a size of 120–135 nm, providing stability and effective cellular uptake. The miR-1296 mimic (accession no. MIMAT0005794) and control miRNA (NC) were purchased from Life Technologies (Carlsbad, California, United States), and fluorescently labeled miR-1296-CY3 conjugate was purchased from Invitrogen (Carlsbad, California, United States). An N/P ratio of 3 protected miRNA against serum degradation and controlled release (around 33% over 24 hours). Encapsulation efficiency was 94.47% in N/P by 3. NL-miR-1296 entered the cells in a time-dependent manner and was released into the cytoplasm, where it downregulated cyclin D1 (CCND1) and poly(ADP-ribose) polymerase 1 (PARP1) expression and reduced TNBC cell viability. Furthermore, pretreatment with NL-miR-1296 significantly increased the sensitivity of the cells to cisplatin. In MDA-MB-231 cells, 0.24 µM of NL-miR-1296 significantly reduced viability versus untreated cells (P < 0.001), 0.5 µM of NL-miR-1296 reduced viability to 33.45% ± 5.29% versus 94.94% ± 14.68% with NL-miR-NC (P < 0.002), and lipofectamine did not significantly reduce viability at comparable doses. Additionally, 0.5 µM NL-miR-1296 combined with 1 µM cisplatin reduced viability significantly (P < 0.001). Up to 40 days, no significant loss of biological activity was reported, but reduced activity was observed after 80 days at 25 °C (P < 0.002) and 4 °C (P < 0.05). It should be noted that serum protection was evaluated for only up to 24 hours. Moreover, the study was limited to in vitro experiments on only the MDA-MB-231 TNBC cell line, with no animal model data on therapeutic efficacy or pharmacokinetics.115
A single-stranded DNA template was designed containing antisense sequences for miR-182 and miR-205. They synthesized manganese dioxide (MnO2) NPs by reducing potassium permanganate (KMnO4) using a PAH (cationic polyelectrolyte). They then attached Ce6 (chlorin e6), creating MnO2@Ce6 NPs. To provide a hydrogel loaded with doxorubicin (HD), they loaded DOX into the hydrogel by incubating the hydrogel with DOX. To provide HDMnO2@Ce6 (HDMC), they bound MnO2@Ce6 particles electrostatically to the hydrogel. The highest killing effect was observed in HDMC combined with light (660 nm light [50 mW cm−2], 10 minutes), followed by HDMC alone, and the lowest was reported for hydrogel. Some of the limitations of this innovation were the unstable nature of MnO2@Ce6 in biological media, leading to coagulation; however, the hydrogel component stabilized MnO2@Ce6. This system could still face stability challenges in complex biological environments. Besides, this system targeted MDA-MB-231 and its potential off-target effects in other cancer types or heterogeneous tumors are not extensively discussed. The follow-up duration was 14 days in murine models, lacking long-term toxicity data. In addition, the multi-step synthesis process could present scalability challenges for clinical translation. It should be noted that the use of cytosine–phosphate–guanine (CpG) sequences may induce immune responses, but immune-related outcomes were not assessed. The photodynamic therapy (PDT) effect relies on a 660 nm laser, which limits tissue penetration (about 5–10 mm), posing a challenge for treating deep tumors.116
Fig. 7 demonstrates the schematic of various NP-based delivery systems for miRNA therapeutics in breast cancer. Moreover, Table 2 summarizes the NP-based miRNA delivery systems in breast cancer research.
| System name | Samples | Key data (size, zeta potential, and EE%) | Main statistical data (viability, toxicity, and efficacy) | Challenges/limitations | Year (ref.) |
|---|---|---|---|---|---|
| HDMC (hydrogel + DOX + MnO2@Ce6) | MDA-MB-231, L02, MCF-7, and 4T1 (in vivo) | Size: HDMC 190 nm; zeta: ∼−17.8 mV; and DOX EE: 100 µM saturation | HDMC + light → highest cytotoxicity and in vivo: slowest tumor growth, reduced metastasis, and minimal weight loss | Instability in biological media, limited tumor model, short-term (14 days) study, and complex synthesis | 2021 (ref. 116) |
| NL-miR-1296 (niosomal lipoplex) | MDA-MB-231 | Size: 123–135 nm; zeta: positive (DOTAP); and EE: 94.47% (N/P 3) | 0.5 µM NL-miR-1296 → 33.45% viability; sensitized to cisplatin; and high uptake | In vitro only, 24 h serum stability, instability after 80 days storage, and no in vivo data | 2021 (ref. 115) |
| RGD-PEG-ECO/miR-200c nanoparticles | MDA-MB-231 and Hs578T (in vivo) | Size: ∼174 nm; zeta: +25 mV; and RNA EE: confirmed | ∼1000× miR-200c upregulation; significant inhibition of migration/invasion; and no systemic toxicity | Transient miR effect, variable response by cell line, small animal n, and no long-term toxicity | 2021 (ref. 114) |
| eEV-PNC (uPA-targeted antimiR-21/-10b PLGA NPs) | 4T1 (in vivo) and BALB/c mice | Size: ∼250 nm; EE: 70%; and zeta: not specified | 2.8× More antiproliferative vs. DOX; 40% complete tumor regression; survival ↑; and no systemic toxicity | Off-target accumulation, complex prep, no synchronized release, and partial tumor-specificity | 2022 (ref. 113) |
| C-PEG-Nio-AuNP/miR-33a | MCF-7 | Size: ∼112–118 nm; zeta: +49–56 mV; and AuNP EE: 82.41% | 73% Apoptosis, high Bax/Bcl2 ratio, and good 90 days stability | In vitro only, no normal cell data, relies on the EPR effect, and no targeting ligands | 2024 (ref. 109) |
| AuNP/miR-204-5p (free NPs) | MCF-7 | Size: 28.3 nm; zeta: −32.2 mV; and PDI: 0.435 | Non-toxic ≤0.6 µg mL−1; MMP-9 ↓, NF-κB ↓ via miR-204-5p; and anti-inflammatory effect | Only MCF-7, no in vivo, short-term (72 h), and no pharmacokinetics or off-target data | 2023 (ref. 110) |
| PEG-AuNP/miR-206 | MCF-7 | Size: not specified; zeta: +12.5 mV; and miR binding ∼76% | ∼80% Viability reduction at 48 h; apoptosis induction; and G0/G1 arrest | No in vivo, short-term only, no long-term efficacy, unclear systemic toxicity, and incomplete caspase data | 2022 (ref. 111) |
| MSN-PEI-miR-200c-HA | MDA-MB-231 (in vitro and in vivo) | Size: not specified (aggregated to ∼400 nm in serum); and miRNA loading: 0.7 wt% | EMT inhibition, reduced invasion, G2 arrest, tumor shrinkage, and no in vivo toxicity | Protein corona, off-target organ distribution, low miR content, PEI toxicity risk, and in vivo stability | 2023 (ref. 112) |
Kobayashi et al. purified exosomes from ovarian cancer patient-derived omental fibroblasts and loaded them with miR-199a-3p; Alexa Fluor 488-conjugated miR-199a-3p was synthesized. Primary human omentum-derived fibroblasts were used as a source of endogenous exosomes (around 100 nm), which expressed classical vesicular markers (CD9, CD63, and CD81) and lacked intrinsic tumor-promoting effects. Purified exosomes were loaded with miR-199a-3p, a tumor-suppressive miRNA, by electroporation, which allowed for the stable encapsulation of miRNA without altering the vesicle morphology. Fluorescence tracking showed that loaded exosomes were efficiently taken up by ovarian cancer cells, whereas free miRNA alone did not enter the cells. Exosome-mediated delivery of miR-199a-3p resulted in a significant increase in intracellular miRNA levels (up to around 67
000-fold), which shows the high efficiency of delivery. This system suppressed cancer cell proliferation and invasion by reducing mesenchymal–epithelial transition factor (c-Met) expression and inhibiting hepatocyte growth factor (HGF)-induced ERK and Akt phosphorylation. miR-199a-3p expression increased 8592-fold in CaOV3, 67
188-fold in SKOV3ip1, and 2280-fold in the OCVCAR3 cell lines of the ovary. The optimal dose was 100 µg mL−1. In in vivo models, intraperitoneal or intravenous administration of miR-199a-3p-containing exosomes resulted in preferential tumor accumulation, increased circulating miRNA stability, reduced peritoneal tumor burden, and inhibition of the c-Met signaling pathway in xenografts, demonstrating the efficacy of this nanocarrier for therapeutic miRNA delivery. Mice treated with miR-199a-3p-Exo had significantly lower tumor weights (203.3 ± 106.0 mg) after intraperitoneal injections every 48 hours than the phosphate-buffered saline (PBS) (569.8 ± 53.5 mg) and control miRNA-Exo (529.6 ± 30.8 mg) groups. Furthermore, compared to the PBS and control groups, the miR-199a-3p-Exo group had significantly fewer peritoneal implants (23.6 ± 7.4) (Fig. 8). Despite hopeful xenograft model results, more preclinical safety and pharmacokinetic data are needed before clinical use. The findings are restricted to ovarian cancer models, and their relevance to other cancers remains untested. Additionally, scalability, cost, or regulatory challenges are not discussed for producing exosome-based therapies.121
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| Fig. 8 Efficacy of the miR-199a-3p-loaded exosomes in xenograft ovarian cancer model mice. (A) Schematic showing the schedule of the in vivo experiments. (B) Representative pictures taken by the IVIS imaging system of tumor-inoculated animals (left, DIR-labeled exosomes and right, PBS) at 5 weeks after inoculation with SKOV3-13 cells. (C) Enlarged picture of the mouse in (B) after laparotomy. The arrow indicates the resected tumor. (D) Luciferase activities of peritoneal tumors of mice injected i.p. with PBS, control miRNA-loaded exosomes, or miR-199a-3p-loaded exosomes. Five weeks after inoculation, the mice were sacrificed and (E) their tumor total burden and (F) number of peritoneal implants were confirmed. These results are expressed as mean ± SD; PBS group, n ¼ 10; control miRNA-loaded exosome group, n ¼ 9; and miR-199a-3p-loaded exosome group, n ¼ 8. (G) Immunohistochemical analysis of the peritoneal implants. Scale bar = 200 mm. (H) Luciferase activities of the peritoneal tumors of mice injected intravenously with PBS, control miRNA-loaded exosomes or miR-199a-3p-loaded exosomes measured weekly. The results are expressed as mean ± SD; PBS group, n ¼ 6; control miRNA-loaded exosome group, n ¼ 5; and miR-199a-3p-loaded exosome group, n ¼ 5. (I) miRNA qRT-PCR with mouse plasma. PBS, control miRNA-loaded exosomes, miR-199a-3p, or miR-199a-3p-loaded exosomes were injected intravenously into female athymic BALB/c nude mice. Fifteen minutes after the injection, miR-199a-3p levels in plasma were determined using qRT-PCR. (J) Suggested treatment model using exosomes from fibroblasts derived from patients' omenta. (Note: the correct spelling of the word in part (J) should be Omentectomy, which is spelled wrongly in the original figure.) **, P < 0.01. Reprinted with permission from ref. 121. Copyright, 2025. Published by Elsevier. | ||
A dextran-based lipid nanogel (LNG) system was synthesized using a graft copolymerization-induced self-assembly (GISA) approach. LNGs were fabricated via GISA, where hydrophobic poly(methyl acrylate) chains induced self-assembly of the nanogel and disulfide linkage stabilized the structure in a reducing environment-sensitive manner. Cationic amphiphilic lipids were then assembled on the surface of the nanogels, creating a hybrid nanocarrier that could simultaneously load paclitaxel and siRNA. Paclitaxel was encapsulated in the nanogel core through hydrophobic interactions, while siRNA was electrostatically loaded into the lipid shell. After endocytosis, the cytoplasmic reducing environment caused the nanogel to degrade and siRNA to be released; siRNA reduced drug resistance by silencing multidrug resistance protein 1 (MDR1) and enhanced the efficacy of paclitaxel. LNGs accumulated in the tumor in in vivo models through the EPR effect, providing a more effective combination therapy. The siRNA encapsulation efficiency was 89.6% ± 3.7%. LNGs exhibited high cellular uptake in both OVCAR3 and drug-resistant DROV cells, and MDR1 gene knockdown was efficient using siRNA1, especially in drug-resistant DROV cells. Combination therapy with LNGs-siRNA and paclitaxel reduced cell viability more than single-agent treatments. No significant body weight loss or organ damage, indicating good biosafety. They reported that transmission electron microscopy (TEM) showed incomplete membrane structures in paclitaxel-loaded LNGs, indicating that hydrophobic paclitaxel weakened the lipid shell, which can affect stability. LNGs mostly stay in the cytoplasm due to their size, which can limit access to nuclear targets. Additionally, the drug loading percentage was 1.35%, which may limit the therapeutic payload per carrier.122 In another study, Pisano et al. used immune-derived exosome mimetics (IDEM) loaded with DOX to examine a scalable delivery strategy against ovarian cancer. A prolonged drug release profile and high drug entrapment efficiency were demonstrated by the EV-mimetics. In addition, DOX-loaded IDEM outperformed the free anticancer agent in terms of in vitro cytotoxicity and apoptotic effect.123
A nanostructure was designed using DNA tubular origami (DTO) and fluorescence dramatically increased after exposure to miR-21, indicating DTO opening. The DTO nanocarrier was designed as a 3D tubular structure of DNA origami and stabilized in the closed state by capping strands at both ends. This architecture prevented unwanted kinking and edge misalignment and allowed for the controlled incorporation of 20 internal binding sites for cargo or fluorescent labels. DTO was synthesized by using a one-pot method based on complementary base pairing. The nanostructure underwent structural unfolding in the presence of miR-21, which was overexpressed in ovarian cancer cells, and showed a significant increase in fluorescence signal. The approximately 120 nm length of the DTO made it suitable for tumor accumulation via the EPR effect. Cellular uptake and live imaging studies showed that DTO was selectively internalized in cells overexpressing miR-21, and this process was likely related to caveolin-1-dependent endocytosis. Flow cytometry was used to analyze 15
000 cells, and the ovary's SKOV3/DDP and A2780/DDP cell lines demonstrated the highest levels of miR-21 expression and effective DTO internalization. 2780/DDP demonstrated quick uptake within 0.5 hours, while SKOV3/DDP increased gradually over 3 hours. Normal ovarian epithelial cells (IOSE80) were hardly absorbed. Despite some structural differences and nonspecific membrane binding in IOSE80, the DTO was able to effectively target cancer cells in vitro. Obstacles include dimerization during unzipping and the lack of in vivo testing.124
Salamone et al. created pristine AuNPs and reported that the successful non-covalent loading of trastuzumab (TZ) onto hydrophilic AuNPs resulted in stable nanoconjugates with a 41% ± 4% loading efficiency. The AuNPs-TZ displayed a time-dependent and miR-200c-specific sensitization effect by reducing viability in miR-200c-transfected SKOV3 cells, especially at 0.1 µg mL−1 after 48 hours, but not cytotoxicity alone. Apoptosis tests showed that miR-200c-transfected cells treated with AuNPs-TZ had a synergistic increase of 25.2% in late-stage apoptosis. Moreover, the HER-2/MAPK signaling pathway was markedly downregulated, and SKOV3 cells developed epithelial differentiation characteristics as a result of the combination of AuNPs-TZ and miR-200c.125 Additionally, flower-shaped silicon dioxide–polyethylenimine (SiO2–PEI) NPs were synthesized using a high plasmid DNA (pDNA) and siRNA loading capacity in order to deliver the tumor suppressor miR-let-7c-5p to HeLa cells. With little cytotoxicity, this method efficiently transferred miR-let-7c-5p, preventing the spread of cancer. According to their findings, a promising anticancer strategy for cervical cancer was represented by flower-shaped SiO2-PEI NPs loaded with let-7c-5p (FSP-let-7c-5p NPs), which targeted the β-catenin/SLUG and miR-let-7c-5p/insulin-like growth factor 1 receptor (IGF-1R)/PI3K/AKT pathways.126
Table 3 summarizes the NP-based miRNA delivery systems used in ovarian and cervical cancer research studies.
| Aspect | Dextran-based lipid nanogel | Fibroblast-derived exosomes | DNA tubular origami-DTO |
|---|---|---|---|
| Nanocarrier type | Dextran-based lipid nanogel (LNG) synthesized via GISA | Exosomes isolated from omental fibroblasts | DNA tubular origami (DTO) constructed with 104 staple strands |
| Particle size | ∼100 nm (TEM-confirmed lipid bilayer) | ∼100 nm (electron microscopy and nanoparticle tracking) | Length = ∼120 nm and width = 13–18 nm (closed) and ∼60 nm (opened/dimerized) |
| Drug/siRNA loading | PTX drug loading: 1.35%; EE 93%; and siRNA EE 89.6% ± 3.7% | Electroporated miR-199a-3p into exosomes | 20 miR-21 binding sites with FAM-labeled handles |
| Cell uptake | High uptake in OVCAR-3 and drug-resistant DROV cells and enhanced in DROV via P-gp efflux bypass | No tumor-promoting effect of fibroblast exosomes on OC cells | Rapid uptake in A2780/DDP cells; slower but stronger over time in SKOV3/DDP; and minimal in IOSE80 |
| Gene silencing/effect | Efficient MDR1 knockdown in DROV; lowered PTX IC50; and combo therapy improved viability reduction | miR-199a-3p suppressed OC proliferation, invasion; downregulated c-Met, mTOR, IKKβ, and CD44 | miR-21-triggered DTO unzipping and fluorescence increase and DTO internalized and opened in cancer cells |
| In vivo efficacy | LNGs-PTX-siRNA reduced tumor volume; no body weight loss; and confirmed apoptosis (H&E, TUNEL, PCNA, Ki67) | miR-199a-3p-Exo reduced tumor weight (203.3 ± 106.0 mg vs. controls >500 mg), fewer peritoneal implants; and stable plasma levels | No in vivo data reported |
| Key quantitative data | siRNA EE 89.6% ± 3.7%; PTX DL 1.35%; and tumor weight reduction significant | miR-199a-3p fold increase: CaOV3 (8592×), SKOV3ip1 (67 188×), OVCAR3 (2280×); and tumor weight ↓ ∼64% |
DTO length ∼120 nm; fluorescence measured every 10 s × 100; and 15 000 events per sample flow cytometry |
| Challenges/limitations | Membrane integrity disruption by PTX; moderate drug loading; omitted some in vivo controls; knockdown varies with siRNA sequence; and limited nuclear entry | Electroporation may damage exosome membranes; limited long-term and safety data; systemic biodistribution not fully explored; and scalability issues | Structural deviations due to surface effects; dimerization during unzipping; imaging overlap (DAPI/Cy3); no in vivo data; uptake varies by cell line; and nonspecific binding in normal cells |
| Ref. | 122 | 121 | 124 |
In a study by Liang et al., the miR-200c mimic was used for in vivo delivery via a PEI–PEG–RGD nanocarrier. PEI, a cationic component, electrostatically complexed and stabilized the miRNA, allowing for systemic injection. PEG improved carrier performance by increasing biocompatibility and circulatory stability, while the RGD peptide induced preferential accumulation of the nanocarrier in endometriotic lesions, as confirmed by near-infrared imaging. Successful delivery of miR-200c via this nanocarrier resulted in a decrease in fluorescence signal intensity and a reduction in the volume of endometriotic cysts. They reported that restoring miR-200c levels in human endometrial stromal cells (HESCs) resulted in a significant decrease in cell migration and proliferation (P < 0.01) while inhibiting it had the opposite effect. miR-200c was specifically directed against the lncRNA metastasis-associated lung adenocarcinoma transcript 1 (MALAT1), which was significantly upregulated in ectopic tissues (P = 0.0477) and correlated negatively with miR-200c expression (r = −0.8176, P < 0.0001). Two distinct binding sites were validated by luciferase assays. miR-200c inhibition reversed the effects of MALAT1 knockdown or miR-200c overexpression, which suppressed epithelial–EMT by upregulating E-cadherin and downregulating ZEB1, ZEB2, and N-cadherin. Treatment with the miR-200c mimic dramatically decreased lesion volume and fluorescence intensity in vivo using a rat model of endometriosis, whereas the inhibitor had the opposite effect. Although the results are encouraging, they should be interpreted with caution because the study was limited by a small initial microarray sample, substantial reliance on in vitro assays that may not fully mimic in vivo conditions, and the use of a rat model that may not entirely recapitulate the biological behavior of human endometriosis.26
PLGA-based NPs were developed to deliver miRNA-503 to endometriotic cyst stromal cells. miRNAs 503 and primer were purchased from Pishgam Co. (St Kargar, Tehran, Iran). PLGA formed NPs with a size of less than 100 nm, which increased in size after complexation with miRNA and remained suitable for gene delivery. The addition of PEI increased the positive surface charge of the complexes, which enhanced the electrostatic interaction with the cell membrane and facilitated the entry of NPs into endometriotic stromal cells through endocytosis; this process was confirmed by TEM. After entering the cells, the PLGA/miRNA-503 complex caused a dose- and time-dependent decrease in cell viability; at 75 µM for 48 hours, cell viability was 89.9% versus 98.4% in the controls. Apoptosis rose significantly to 35.7% with PLGA/miRNA, compared to <1% in controls. In vivo, the treated lesions appeared smaller, with more apoptosis. Although effective, the system's limitations include dose-dependent cytotoxicity and a narrow therapeutic window, with long-term effects yet to be studied.128
In the field of women's health, placental dysfunction underlies many pregnancy-related diseases, which has led to increased attention to the development of targeted RNA delivery strategies to the placenta using LNPs. Recently, several studies investigated the use of LNP formulations for targeted mRNA delivery to the placenta; for example, in the study by Safford et al., LNP C5 exhibited a 4-fold increase in mRNA delivery efficiency compared to a standard formulation and in vivo intravenous administration of LNP C5 to pregnant mice improved mRNA delivery to the placenta.131 Moreover, Swingle et al. identified LNP 55, which performed more than 100 times better than the FDA-approved Onpattro LNP in terms of mRNA delivery to the placenta in pregnant mice. It was believed that LNP 55's targeted delivery mechanism, which enabled selective delivery to the placenta, involved β2-glycoprotein I adsorption. In preeclampsia models caused by inflammation and hypoxia, LNP 55 encapsulating VEGF mRNA improved fetal health, placental vasculature, and immune function while lowering maternal hypertension.137
Nanocarriers have potential beyond relying solely on the EPR effect in reproductive disorders; for example, in endometriosis, RGD-based ligand-tagged carriers targeting αvβ3 enabled selective accumulation and efficient entry of si/miRNA into endothelium and stromal cells, and PEI- or PLGA-based polymeric carriers enhanced gene knockdown efficiency and apoptosis induction by enhancing endocytosis.26,127,128 Moreover, in the placenta, some LNPs showed differential placental distribution and improved fetal and maternal indices by binding to proteins such as β2-glycoprotein I. These results underscore the practical advantage of molecular targeting and relying on physiological properties of the target tissue although dose-dependent toxicity, heterogeneity of receptor expression, and limited generalizability of animal models still hinder clinical translation.131,137
Polymer NPs have been widely investigated for miRNA delivery due to their structural diversity and the possibility of fine-tuning their physicochemical properties. Cationic polymers such as PEI, by virtue of their strong electrostatic complexation and the “proton sponge” effect, have provided effective endosomal escape and have resulted in tumor growth suppression in preclinical models through the delivery of tumor suppressor miRNAs; however, their high positive charge density, lack of biodegradability, and dose-dependent toxicity have limited their clinical application.138 In contrast, biodegradable polyesters such as PLGA and poly(ε-caprolactone) (PCL) have offered higher biosafety and have enabled controlled release, but due to their negative surface charge, they often require cationic modifications or hybrid systems for efficient miRNA loading.113,139,140 LNPs have shown an intrinsic ability to interact with the cell membrane and facilitate miRNA entry into the cell due to their structural similarity to the cell membrane. In these systems, spontaneous electrostatic complexation between cationic lipids and miRNA resulted in effective aggregation and protection against enzymatic degradation. Furthermore, the use of helper lipids such as cholesterol and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), as well as PEGylation, has significantly improved the stability, circulation time, and biosafety of LNPs.26,141
siRNA-based therapeutic approaches induce an RNAi response by introducing synthetic siRNA strands into target cells, thereby inhibiting the expression of a specific mRNA to achieve a gene silencing effect. In contrast, miRNA-based therapies include two main strategies: miRNA inhibition and miRNA replacement. In the inhibition approach, a similar function is pursued as antisense therapies because synthetic single-stranded RNAs act as miRNA antagonists (also known as antagomirs or anti-miRs) by inhibiting endogenous miRNAs and neutralizing their effect. In the replacement approach, synthetic miRNAs (or miRNA mimics) are used to mimic the function of naturally occurring endogenous miRNAs.142 One of the fundamental differences between siRNA and miRNA is that siRNA usually recognizes only a specific target site on a single mRNA, thereby inhibiting the expression of a specific gene. In contrast, miRNAs, because their mRNA recognition depends on binding to a short and limited segment of the RNA sequence, can simultaneously target multiple different mRNAs and regulate the expression of multiple genes. To initiate the RNAi process, siRNA must have complete complementarity with its target mRNA, while miRNAs can bind to multiple mRNAs with incomplete complementarity. In addition, the mechanism of action of the two is also different; siRNA acts by directly cleaving and degrading mRNA, while miRNA mainly reduces gene expression by inhibiting the translation process.143 One of the inherent challenges of miRNA-based therapies is the occurrence of off-target effects and their associated toxicities, which arise from the ability of each miRNA to simultaneously regulate the expression of different genes and are recognized as one of the most important obstacles to the development of miRNA-based therapies. Therefore, further research is necessary to optimize the design and application of miRNAs and develop them as effective strategies in cancer treatment.144 Furthermore, the effective dose of miRNAs, control of tissue distribution, and their long-term safety monitoring remain more challenging than siRNA/mRNA.
Numerous important obstacles limit the therapeutic potential of miRNA delivery, especially when combined with NPs in cancer and reproductive health treatments. One of the limitations of utilizing nano-based delivery systems is their stability. However, the hydrogel component stabilized MnO2@Ce6 in the study by Wang et al.116 This system could still face stability challenges in complex biological environments. Additionally, significant degradation of biological activity for NL-miR-1296 was reported after 80 days at common storage temperatures (25 °C and 4 °C) by Albakr et al.115 Moreover, the uniformity of the created NPs remains an important factor in their reproducibility and scalability. The moderate polydispersity (PDI = 0.435) of the system designed by Farhana et al.110 implies that the NP size distribution was not highly uniform, which could have affected the outcomes. Moreover, most of the systems had a complex multi-step production process, including drug loading, miRNA conjunction or aptamer modifications,116 which could present scalability challenges for clinical translation. Rapid degradation and clearance of miRNAs in the bloodstream, limited penetration through biological barriers, such as the tumor microenvironment and blood–brain barrier, and endosomal entrapment limit functional release. The poor uptake of free miRNA in experiments, as reported by Schilb et al.,114 together with the rapid decline of miR-200c levels after 4 days and the significant drop by day 14, highlights the instability of miRNA in biological systems and the necessity for repeated dosing. Notably, clinical translation is made more difficult by pharmacokinetic restrictions and the difficulty of scalable, reproducible manufacturing.
Loading miRNAs into EVs, which are frequently employed for tumor-targeting applications, presents another significant challenge. Although the functionality of EVs has improved due to bioengineering advancements, non-specific interactions can lead to less precise targeting and undesired accumulation in non-tumor tissues, and loading efficiency is still limited. Additionally, when NPs are exposed to biological fluids, a protein corona is formed around them, which makes it more difficult for them to target and affects their capacity to deliver miRNAs to cancer cells specifically.112,113 Furthermore, engineered EV-mimetic NPs, which mimic the properties of natural EVs, face hurdles such as rapid clearance by macrophages, reducing their therapeutic potential. The need for optimization is highlighted by this immune recognition and the corresponding low therapeutic efficacy. Furthermore, it is difficult to increase the production of these NPs while preserving their high loading efficiency and homogeneity.145
AntimiRNA accumulation in non-tumor organs (liver, spleen, and kidneys) in the study by Bose et al.113 suggested incomplete tumor specificity. These challenges can limit the potential for dose escalation in aggressive tumors. The utilization of structures like CpG sequences may induce immune responses, but not all studies have assessed immune-related outcomes, specifically in the long term.110,114,116 Additionally, most of the utilized cell lines in recent studies included MDA-MB-231, Hs578T, OCVCAR3, or SKOV3,114,115,121,124,127 in which each study focused on one or two lines in a single cancer type. There is a need for more evaluations of the usage of the developed systems in other cell lines and cancer types for broader applicability.
Most studies had a limited duration of follow-up, varying from 48 hours to 90 days,109,111,114,121,128 which leads to limited data about the long-term toxicity, off-target effects, and biosafety that limit the potential of clinical utility. Moreover, the present experiments are limited to in vitro trials, and for more precise data, there is a need for more clinical experiments. In addition, a small animal sample size (standard in preclinical work) leads to potential limitations for statistical robustness.146
For future studies, it is necessary to explore strategies to enhance the stability and reproducibility of miRNA-based NPs, accompanied by addressing the limited targeting precision through tissue-specific ligands or advanced NP formulations and insufficient drug delivery. Additionally, novel strategies to increase the miRNA loading efficiency of EVs may enhance their clinical applicability. Furthermore, to gain a better understanding of their safety profiles, long-term studies assessing immune responses are crucial.
Biological research has changed as a result of artificial intelligence's (AI) ability to efficiently glean insights from complex data. Machine learning (ML) techniques, particularly deep learning approaches, can be used to identify critical miRNAs across various cancers and create prognostic models. Additionally, AI integration has led to the creation of comprehensive miRNA databases for identifying mRNA and gene targets, facilitating a better understanding and application in cancer research. These methods significantly enhance the identification of diagnostic and prognostic biomarkers by enabling the precise prediction of miRNA targets, subcellular localization, and miRNA-disease associations.147 Furthermore, by identifying connections between miRNAs, medications, and illnesses, ML reduces experimental costs and speeds up drug discovery, all of which contribute to the development of miRNA-targeting therapies.148 Additionally, AI facilitates integrative analyses of multi-omics data, which advances our knowledge of miRNA biology and its potential applications in therapy. These developments are gradually changing the field of miRNA research and are anticipated to have a greater influence on personalized medicine and clinical diagnostics for cancer and other illnesses.149
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