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Ultrasound-assisted one-pot synthesis of tetrazolo[1,5-a]pyrimidines and their pharmacological evaluations

Savan S. Bhalodiyaa, Mehul P. Parmara, Chirag D. Patela, Shana Balachandranb, Madan Kumar Arumugamb and Hitendra M. Patel*a
aDepartment of Chemistry, Sardar Patel University, Vallabh Vidyanagar, Gujarat 388120, India. E-mail: hm_patel@spuvvn.edu
bCancer Biology Lab, Centre for Molecular and Nanomedical Sciences, Sathyabama Institute of Science and Technology, Chennai, Tamil Nadu 600119, India

Received 20th April 2026 , Accepted 18th May 2026

First published on 5th June 2026


Abstract

A series of twelve tetrazolo[1,5-a]pyrimidine derivatives 4(a–l) were synthesized via an efficient, ultrasound-assisted one-pot multicomponent reaction of 5-aminotetrazole, malononitrile or acetylacetone, and various heterocyclic aromatic aldehydes in acetic acid under ultrasonic conditions. The optimized protocol afforded isolated yields of 85–93% within 12–15 minutes, offering significant advantages over existing methods, including milder conditions, reduced reaction times, and straightforward product isolation without intermediate purification. The synthesized derivatives were evaluated for antimicrobial activity against two Gram-positive bacteria (Staphylococcus aureus and Bacillus subtilis), two Gram-negative bacteria (Escherichia coli and Klebsiella pneumoniae), and one pathogenic fungus (Candida albicans) using the agar well diffusion method. Compounds 4g and 4l demonstrated near-equivalent activity to the aminoglycoside reference gentamicin against S. aureus, while compounds 4f, 4g, and 4l exceeded the antifungal reference nystatin against C. albicans. The anticancer activity assessed by MTT assay against the HeLa (cervical carcinoma) and HCT-116 (colorectal carcinoma) cell lines revealed that compound 4l (IC50 = 13.4 ± 0.7 µM, HeLa; 22.6 ± 1.1 µM, HCT-116) and compound 4g outperformed the quercetin reference standard. Structure–activity relationship analysis identified the C-5 acetyl group and benzo[d][1,3]dioxol or 5-bromothiophene substituents at C-4 as key contributors to biological potency, establishing 4l and 4g as primary lead compounds for further studies.


1. Introduction

Multicomponent reactions (MCRs) are highly valuable in modern synthetic chemistry due to their efficiency, sustainability, and versatility in constructing complex molecules in a single step.1,2 These reactions adhere to green chemistry principles by often removing the necessity for intermediate purification and minimizing reagent consumption.3,4 MCRs have broad applications across pharmaceuticals, materials science, and agrochemicals, serving as a robust platform to generate extensive libraries of bioactive compounds, functional materials, and innovative molecular architectures critical for both research progress and industrial use.5

Tetrazole and pyrimidine core structures represent highly significant scaffolds in medicinal chemistry, extensively studied for their diverse biological activities and potential in drug design.6,7 This moiety possesses various biological properties, including antimicrobial,8,9 anticancer,10,11 anti-inflammatory,12,13 anti-oxidant,14,15 anti-malarial16,17 and various other properties. Some of the marketed drugs containing tetrazole and pyrimidine are shown in Fig. 1. Extensive research has been conducted in the field of designing and developing biologically active drug molecules, with a primary focus on the molecular hybridization approach.18,19 This method entails the structural alteration of biologically active pharmacophores to produce hybrid compounds characterized by heightened efficacy and improved activity in comparison to the original parent medications. Moreover, these hybrid pharmaceuticals have demonstrated a unique mechanism of action and a decreased occurrence of undesired side effects when contrasted with their original counterparts.20,21


image file: d6ma00549g-f1.tif
Fig. 1 Tetrazole and pyrimidine-containing marketed drugs.

Although several protocols have been reported for the synthesis of tetrazolo-pyrimidine cores using catalysts and media such as PEG-400,22 TBBDA,23 MNPs@SiO2-Pr-AP,24 AlCl3,25 [BMIM]BF4,26 [BMIM]HSO4,27 I2,27 PGTSA/Cu(II),28 etc. To the best of our knowledge, there is a lack of alternative methodologies for synthesizing tetrazolo-pyrimidine scaffolds reported in the current literature.29,30 Therefore, exploring new and diverse strategies for their synthesis remains essential due to their significant importance.

To the best of our knowledge, this is the first report describing an ultrasound-mediated one-pot synthesis of tetrazolo[1,5-a]pyrimidines. Compared with previously published protocols employing different catalysts, the present methodology offers several distinctive advantages, including being metal free, milder reaction conditions, energy efficiency, significantly higher yields, short reaction time, and simple product isolation. Furthermore, the current work not only provides an environmentally sustainable synthetic route, but also delivers biologically active compounds with promising antimicrobial profiles, thereby demonstrating practical medicinal relevance (Scheme 1).


image file: d6ma00549g-s1.tif
Scheme 1 Reaction protocols of tetrazolo-pyrimidine scaffolds.

2. Experimental

2.1. Synthetic protocol for the synthesis of tetrazolo[1,5-a]pyrimidines 4(a–l)

Compounds 4(a–l) were synthesized via an ultrasound-assisted protocol by reacting 5-aminotetrazole (1, 1 mmol) with either malononitrile (2a, 1 mmol) or acetylacetone (2b, 1 mmol) and a range of heterocyclic aromatic aldehydes (3(a–f), 1 mmol) in the presence of acetic acid. The reactions were carried out under ultrasonic irradiation (130 W, 28 kHz) for 12–15 minutes. Reaction progress was periodically checked using thin-layer chromatography (TLC). Upon completion, the reaction mixture was allowed to cool to ambient temperature, and water was added to induce precipitation. The resulting solid product was isolated by filtration, washed with a small quantity of ethanol followed by hot water, and dried to obtain the purified compounds.

2.2. Analytical data of the synthesized compounds 4(a–l)

2.2.1. 5-Amino-7-(5-bromothiophen-2-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4a). Pale yellow, m.p. 230–232 °C; 1H NMR (DMSO-d6) (d, ppm): 9.51 (s, 1H, NH), 6.76 (d, J = 4Hz, 1H, ArH), 6.68 (d, J = 4Hz, 1H, ArH), 6.59 (s, 2H, NH2), 5.56 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 174.09, 156.82, 144.83, 132.54, 131.41, 121.15, 113.37, 60.93, 53.76; molecular weight: 324.16, MS (ESI m/z): 325.37 [M + H]+; elemental calc. for C9H6BrN7S: C-33.35%, H-1.87%, N-30.25%, S-9.89%; found: C-33.38%, H-1.91%, N-30.28%, S-9.92.
2.2.2. 5-Amino-7-(1H-imidazol-2-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4b). Pale yellow, m.p. 230–232 °C; 1H NMR (DMSO-d6) (d, ppm): 12.13 (s, 1H, NH), 9.81 (s, 1H, NH), 6.96 (d, J = 4Hz, 1H, ArH), 6.83 (d, J = 4Hz, 1H, ArH), 6.60 (s, 2H, NH2), 5.55 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 172.55, 157.48, 147.79, 121.81, 121.15, 120.73, 60.99, 53.93; Molecular weight:229.21, MS (ESI m/z): 228.52 [M – H]; elemental calc. for C8H7N9: C-41.92%, H-3.08%, N-55.00%; found: C-41.95%, H-3.07%, N-55.03%.
2.2.3. 5-Amino-7-(1H-pyrrol-2-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4c). Pale yellow, m.p. 236–238 °C. 1H NMR (DMSO-d6) (d, ppm): 11.66 (s, 1H, NH), 10.45 (s, 1H, NH), 6.65 (d, J = 4Hz, 1H, ArH), 6.48 (s, 2H, NH2), 6.24 (t, J = 4Hz, 1H, ArH), 6.09 (d, J = 4Hz, 1H, ArH), 5.63 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 173.06, 156.94, 131.41, 119.69, 117.51, 109.19, 107.78, 59.52, 52.23; molecular weight: 228.22, MS (ESI m/z): 229.58[M + H]+; elemental calc. for C9H8N8: C-47.37%, H-3.53%, N-49.10%; found: C-47.35%, H-3.55%, N-49.12%.
2.2.4. 5-Amino-7-(1H-pyrazol-5-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4d). Pale yellow, m.p. 228–230 °C; 1H NMR (DMSO-d6) (d, ppm): 10.87 (s, 1H, NH), 7.48 (d, J = 4 Hz, 1H, ArH), 6.50 (s, 2H, NH2), 6.08 (d, J = 4 Hz, 1H, ArH), 5.59 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 173.70, 156.30, 145.93, 137.99, 118.66, 104.58, 59.78, 52.61: molecular weight: 229.21, MS (ESI m/z): 228.81 [M − H]; elemental calc. For C8H7N9: C-41.92%, H-3.08%, N-55.00%; found: C-41.89%, H-3.10%, N-55.02%.
2.2.5. 5-Amino-7-(1H-imidazol-4-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4e). Pale yellow, m.p. 232–234 °C. 1H NMR (DMSO-d6) (d, ppm): 13.03 (s, 1H, NH), 10.91 (s, 1H, NH), 8.62 (d, J = 4 Hz, 1H, ArH), 7.45 (d, J = 4 Hz, 1H, ArH), 6.49 (s, 2H, NH2), 5.41 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 174.36, 158.60, 137.09, 122.89, 119.81, 117.64, 60.55, 52.87; molecular weight: 229.21, MS (ESI m/z): 230.73 [M + H]+; elemental calc. for C8H7N9: C-41.92%, H-3.08%, N-55.00%; found: C-41.89%, H-3.10%, N-54.95%.
2.2.6. 5-Amino-7-(benzo[d][1,3]dioxol-4-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidine-6-carbonitrile (4f). Pale white crystals, m.p. 238–240 °C. 1H NMR (DMSO-d6) (d, ppm): 10.92 (s, 1H, NH), 7.08 (d, J = 4 Hz, 1H, ArH), 6.96 (d, J = 4 Hz, 1H, ArH), 6.79 (d, J = 4 Hz, 1H, ArH), 6.49 (s, 2H, NH2), 6.02 (s, 2H, CH2), 5.43 (s, 1H, CH); 13C NMR (126 MHz, DMSO-d6) δ: 172.42, 156.55, 150.54, 149.73, 128.61, 127.54, 125.80, 117.25, 112.96, 101.70, 59.85, 47.23; molecular weight: 283.25, MS (ESI m/z): 282.58 [M − H]; elemental calc. for C12H9N7O2: C-50.88%, H-3.20%, N-34.62%; found: C-50.90%, H-3.21%, N-34.58%.
2.2.7. 1-(7-(5-Bromothiophen-2-yl)-5-methyl-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4g). Pale white crystals, m.p. 226–228 °C. 1H NMR (DMSO-d6) (d, ppm): 12.20 (s, 1H, NH), 6.88 (d, J = 4Hz, 1H, ArH), 6.53 (d, J = 4Hz, 1H, ArH), 5.59 (s, 1H, CH), 2.24 (s, 3H, CH3), 2.02 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 190.70, 156.51, 142.13, 141.07, 129.44, 128.61, 111.95, 109.58, 53.24, 28.19, 17.89; molecular weight: 340.20, MS (ESI m/z): 341.49 [M + H]+; elemental calc. for C11H10BrN5OS: C-38.84%, H-2.96%, N-20.59%, S-9.42%; found: C-38.82%, H-2.99%, N-20.63%, S-9.45%.
2.2.8. 1-(7-(1H-Imidazol-2-yl)-5-methyl-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4h). Pale white crystals, m.p. 232–234 °C. 1H NMR (DMSO-d6) (d, ppm): 13.27 (s, 1H, NH), 12.24 (s, 1H, NH), 7.04 (d, J = 4Hz, 1H, ArH), 6.93 (d, J = 4Hz, 1H, ArH), 5.51 (s, 1H, CH), 2.27 (s, 3H, CH3), 2.04 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 193.74, 155.51, 148.24, 141.34, 122.03, 121.17, 111.24, 53.54, 27.77, 17.43; molecular weight: 245.25, MS (ESI m/z): 244.24 [M − H]; elemental calc. for C10H11N7O: C-48.98%, H-4.52%, N-39.98%; found: C-49.02%, H-4.48%, N-39.95%.
2.2.9. 1-(5-Methyl-7-(1H-pyrrol-2-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4i). Pale white crystals, m.p. 226-228 °C. 1H NMR (DMSO-d6) (d, ppm): 12.39 (s, 1H, NH), 11.16 (s, 1H, NH), 6.64 (d, J = 4Hz, 1H, ArH), 6.16 (d, J = 4Hz, 1H, ArH), 5.96 (d, J = 4Hz, 1H, ArH), 5.51 (s, 1H, CH), 2.20 (s, 3H, CH3), 2.07 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 194.44, 156.68, 142.34, 130.69, 118.92, 112.13, 108.93, 107.65, 53.89, 27.27, 17.92; molecular weight: 224.26, MS (ESI m/z): 225.44 [M + H]+; elemental calc. for C11H12N6O: C-54.09%, H-4.95%, N-34.41%; found: C-54.06%, H-4.98%, N-34.42%.
2.2.10. 1-(5-Methyl-7-(1H-pyrazol-5-yl)-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4j). Pale white crystals, m.p. 232–234 °C. 1H NMR (DMSO-d6) (d, ppm): 13.18 (s, 1H, NH), 12.39 (s, 1H, NH), 7.09 (d, J = 4 Hz, 1H, ArH), 6.16 (d, J = 4 Hz, 1H, ArH), 5.62 (s, 1H, CH), 2.20 (s, 3H, CH3), 2.07 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 194.70, 156.68, 144.90, 141.83, 137.22, 111.88, 104.33, 53.38, 27.52, 18.18; molecular weight: 245.25, MS (ESI m/z): 244.87 [M − H]; elemental calc. for C10H11N7O: C-48.98%, H-4.52%, N-39.98%; found: C-48.95%, H-4.55%, N-40.01%.
2.2.11. 1-(7-(1H-Imidazol-4-yl)-5-methyl-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4k). Pale white crystals, m.p. 230–232 °C. 1H NMR (DMSO-d6) (d, ppm): 13.06 (s, 1H, NH), 12.36 (s, 1H, NH), 8.74 (d, J = 4 Hz, 1H, ArH), 7.47 (d, J = 4 Hz, 1H, ArH), 5.56 (s, 1H, CH), 2.24 (s, 3H, CH3), 2.08 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 195.21, 156.42, 141.06, 136.20, 122.76, 119.69, 111.52, 53.38, 27.39, 17.41; molecular weight: 245.25, MS (ESI m/z): 246.29 [M + H]+; elemental calc. for C10H11N7O: C-48.98%, H-4.52%, N-39.98%; found: C-48.94%, H-4.56%, N-39.96%.
2.2.12. 1-(7-(Benzo[d][1,3]dioxol-4-yl)-5-methyl-4,7-dihydrotetrazolo[1,5-a]pyrimidin-6-yl)ethan-1-one (4l). Pale white crystals, m.p. 234–236 °C. 1H NMR (DMSO-d6) (d, ppm): 12.36 (s, 1H, NH), 12.39 (s, 1H, NH), 7.13 (d, J = 8 Hz, 1H, ArH), 6.97 (d, J = 8 Hz, 1H, ArH), 6.91 (t, J = 8 Hz, 1H, ArH), 6.05 (s, 2H, CH2), 5.56 (s, 1H, CH), 2.28 (s, 3H, CH3), 2.13 (s, 3H, CH3); 13C NMR (126 MHz, DMSO-d6) δ: 195.21, 156.42, 151.56, 149.26, 141.06, 125.70, 122.63, 121.48, 112.90, 111.62, 102.02, 48.13, 27.39, 17.41; molecular weight: 299.29, MS (ESI m/z): 298.63 [M − H]; elemental calc. for C14H13N5O3: C-56.18%, H-4.38%, N-23.40%; found: C-56.23%, H-4.35%, N-23.38%.

2.3. Biological activity

2.3.1. Antimicrobial activity.
2.3.1.1. Test organisms and culture conditions. Five microbial strains were used: two Gram-positive bacteria (Staphylococcus aureus and Bacillus subtilis), two Gram-negative bacteria (Escherichia coli and Klebsiella pneumoniae), and one fungus (Candida albicans). The bacterial strains were sub-cultured on MHA and incubated at 37 °C for 24 hours. C. albicans was maintained on SDA and incubated at 25 °C for 48 h. Suspensions were prepared in sterile normal saline and adjusted to 0.5 McFarland standard (∼1.5 × 108 CFU mL−1) for bacteria and 1.0 × 106 cells per mL for the fungal strain.
2.3.1.2. Agar well diffusion assay. Antibacterial and antifungal activities were determined by the agar well diffusion method as described in previous reports with some modifications.31,32 Mueller–Hinton Agar (for bacteria) and Sabouraud Dextrose Agar (for C. albicans) were poured into sterile Petri dishes (90 mm) and allowed to solidify. The agar surface was uniformly inoculated by swabbing with the standardised microbial suspension. Wells of 6 mm diameter were bored with a sterile cork borer and 50 µL of each compound solution (100 µg mL−1 in 0.1% DMSO) was loaded per well.

Ciprofloxacin (10 µg mL−1) and ampicillin (10 µg mL−1) served as positive antibacterial controls; fluconazole (10 µg mL−1) served as the positive antifungal control; 0.1% DMSO served as the negative control. Plates were pre-incubated at 4 °C for 2 h for prediffusion, then incubated at 37 °C (bacteria, 24 h) or 25 °C (C. albicans, 48 h). Zones of inhibition (ZOI) were measured in millimetres including the well diameter using a digital vernier calliper. All experiments were performed in triplicate and the results are expressed as mean ± SD. Statistical analysis was performed by one-way ANOVA with Tukey's post hoc test (p < 0.05) using GraphPad Prism v9.0.


2.3.1.3. Minimum inhibitory concentration (MIC). MIC values were determined by the broth microdilution method in 96-well plates. Serial two-fold dilutions of each compound (1–512 µg mL−1) were prepared in MHB (bacteria) and RPMI-1640 (fungi). Each well was inoculated with 5 × 105 CFU mL−1 and incubated for 18 to 20 h (bacteria, 37 °C) or 24 to 48 h (fungi, 35 °C). Growth was visualised by addition of resazurin (0.015% w/v); a blue-to-pink colour change indicated viable organisms. The MIC was defined as the lowest concentration with no visible colour change. Minimum bactericidal/fungicidal concentrations (MBC/MFC) were determined by sub-culturing MIC and supra-MIC wells onto drug-free agar.
2.3.2. Anticancer activity.
2.3.2.1. Cell lines and culture. The HeLa (cervical carcinoma) and HCT-116 (colorectal carcinoma) cell lines were procured from the National Centre for Cell Science (NCCS), Pune, India. Both cells were maintained in Dulbecco's modified Eagle's medium (DMEM) from Cytiva, USA (Catalog# SH30243.01). The media were supplemented with 10% heat-inactivated Fetal bovine serum (Himedia, Catalog# RM10432), and 1% (v/v) penicillin–streptomycin solution (100 U per mL penicillin and 100 µg per mL streptomycin) (Cytiva, USA. Catalog# SV30010). The cells were maintained at 37 °C in a humidified 5% CO2 incubator.
2.3.2.2. MTT cell viability assay. The MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) assay was performed according to our lab protocol with minimal modifications.33–35 Cells in the exponential growth phase were seeded at 5 × 103 cells per well in 96-well flat-bottom culture plates (200 µL per well) and incubated for 24 h to allow adhesion. All the test compounds were dissolved in DMSO (10 mM stock) and diluted in complete medium to achieve final concentrations of 0.1, 1, 5, 10, 25, 50, and 100 µM. The cells were treated for 24 h at 37 °C, 5% CO2. After treatment, the medium was aspirated and 20 µL of MTT reagent (5 mg mL−1 in PBS) was added per well, followed by 4 h incubation at 37 °C in the dark. The formazan crystals were solubilised with 100 µL of DMSO per well. Absorbance was recorded at 570 nm on a microplate reader.

Percentage viability was calculated as: % viability = (mean OD treated cells/mean OD control cells) × 100. IC50 values were determined by GraphPad Prism. Quercetin was used as a positive reference standard and 0.1% DMSO-treated cells as the negative control. All experiments were conducted in triplicate (n = 3).

2.4. Statistical analysis

All data are expressed as mean ± standard deviation (SD) from three independent experiments (n = 3). Comparisons among groups were performed using one-way analysis of variance (ANOVA) followed by Tukey's multiple comparison test. A p-value < 0.05 was considered statistically significant. Statistical analyses and dose–response curve fitting were performed using GraphPad Prism version 4.0.

3. Results and discussion

3.1. Chemistry

At the beginning of our experiment, we chose 5-amino tetrazole (1, 1.0 mmol), malononitrile (2a, 1 mmol), and 5-bromo thiophene-2-carboxaldehyde (3, 1 mmol) as model substrates to react in a one-pot process. To determine the optimal reaction conditions for reaction, we tested different solvents and catalysts. Our first attempt involved heating the reactants in ethanol without using any catalyst for 24 hours, but it did not result in the desired product (entry 1, Table 1). The model reaction was tested with several different catalysts, as shown in Table 1. Among these, acetic acid in ultrasound worked best, leading to full conversion of the starting materials. Utilizing these best conditions, we did multicomponent reactions with the compounds 1, 2a, and 3(a–f) to check how well and widely this method works. In addition to this, acetyl acetone (2b) was used as an active methylene group to enhance the substrate scope. Various heterocyclic aromatic aldehydes reacted smoothly, giving isolated products with moderate to high yields between 76% and 95%. The range of substrates used is detailed in Table 2. Ultrasound irradiation enhances the reaction via acoustic cavitation, where collapsing microbubbles create localized high temperature and pressure. This improves mass transfer, increases effective collisions, and accelerates dissolution, leading to faster reactions and higher yields without raising the bulk temperature.36–38
Table 1 Optimized reaction conditions for the synthesis of tetrazolo[1,5-a]pyrimidine 4aab

image file: d6ma00549g-u1.tif

Entry Catalyst (mol%) Solvent Temperature (°C) Time (min) Yield (%)b
a Reaction conditions: 5-amino tetrazole 1 (1.0 mmol), malononitrile 2 (1.0 mmol), and 5 bromo thiophene-2-carbaldehyde 3a (1.0 mmol).b Isolated yield.
1 Ethanol Reflux
2 p-TSA (20) Ethanol Reflux 380 77
3 p-TSA (20) Acetonitrile Reflux 360 82
4 p-TSA (20) N,N′-Dimethyl formamide Reflux 360 85
5 L-Proline (20) Ethanol Reflux 400 68
6 L-Proline (20) Acetonitrile Reflux 360 59
7 Acetic acid Reflux 320 80
8 Ethanol Ultrasound
9 p-TSA (20) Ethanol Ultrasound 15 75
10 L-Proline (20) Ethanol Ultrasound 15 86
11 Acetic acid Ultrasound 12 90


Table 2 Substrate scope for tetrazolo[1,5-a]pyrimidines 4(a–l)a
a Reaction conditions: 5-amino tetrazole 1 (1.0 mmol), malononitrile 2a/acetyl acetone 2b (1.0 mmol), and heterocyclic aromatic aldehyde 3(a–f) (1.0 mmol); 4 ml acetic acid, ultrasound.
image file: d6ma00549g-u2.tif


Acetic acid acts as both a solvent and proton source, removing the need for additional catalysts or co-solvents. It is considered a green solvent in CHEM21 and GSK guidelines due to its biodegradability, low toxicity, and renewable potential.39 Acetic acid acts as both a solvent and a Brønsted acid catalyst, providing a polar medium for reactant dissolution and stabilizing intermediates. It activates the aldehyde, promotes enolization of the active methylene compound, and facilitates proton transfer via acetate ions. It is regenerated, confirming its catalytic role.40

As an example, the synthesis of compound 4a was confirmed by seeing a signal singlet at 5.56 ppm in the 1H-NMR spectrum. The key points were that there were no signals for the methylene protons from malononitrile and no signal for the aldehyde proton. Also, the lack of a signal for the aldehyde carbon at 200 ppm in the 13C-NMR spectrum helped to prove that the compound was formed.

To demonstrate the scalability of the developed protocol, a gram scale reaction was performed using 5-amino tetrazole (1), malononitrile (2a), and 5-bromo thiophene-2-carboxaldehyde (3a) at 5 mmol scale under the optimized conditions. The reaction afforded 1.442 g (89% yield) of the desired product without any significant decrease in yield or increase in reaction time, confirming the practical utility and scalability of the present methodology.

3.2. Biological activity

3.2.1. Antimicrobial activity. The antimicrobial activity of the synthesized tetrazolo[1,5-a]pyrimidine derivatives 4(a–l) was evaluated against two Gram-positive bacteria (Staphylococcus aureus and Bacillus subtilis), two Gram-negative bacteria (Escherichia coli and Klebsiella pneumoniae), and one pathogenic fungus (Candida albicans) by the agar well diffusion method at 100 µg mL−1. Gentamicin (10 µg mL−1) and chloramphenicol (5 µg mL−1) served as antibacterial reference standards; nystatin (10 µg mL−1) served as the antifungal reference. The results, expressed as zone of inhibition (ZOI, mm; mean ± SD, n = 3), are presented in Table 3.
Table 3 Antimicrobial activity - zone of inhibition (mm) at 100 µg mL−1
  Gram-positive Gram-negative Fungal
S. aureus B. subtilis E. coli K. pneumoniae C. albicans
Positive controls: chloramphenicol (5 µg mL−1), gentamicin (10 µg mL−1), nystatin (10 µg mL−1). Values are mean ± SD of three independent experiments (mean ± SD, n = 3).
4a 18.4 ± 0.6 17.1 ± 0.7 14.2 ± 0.5 13.5 ± 0.5 12.6 ± 0.4
4b 16.2 ± 0.5 15.6 ± 0.6 13.8 ± 0.6 12.8 ± 0.4 11.4 ± 0.5
4c 14.8 ± 0.4 14.2 ± 0.5 12.6 ± 0.4 11.6 ± 0.3 10.2 ± 0.4
4d 17.6 ± 0.5 16.4 ± 0.4 15.0 ± 0.5 13.9 ± 0.5 13.2 ± 0.4
4e 16.8 ± 0.6 15.8 ± 0.5 14.4 ± 0.5 13.2 ± 0.4 12.0 ± 0.5
4f 19.2 ± 0.7 18.4 ± 0.6 16.8 ± 0.6 15.4 ± 0.5 15.8 ± 0.6
4g 20.6 ± 0.6 19.6 ± 0.5 17.4 ± 0.5 16.2 ± 0.5 16.4 ± 0.5
4h 17.4 ± 0.5 16.8 ± 0.6 14.8 ± 0.4 13.8 ± 0.4 12.8 ± 0.5
4i 15.6 ± 0.4 14.8 ± 0.5 13.2 ± 0.5 12.2 ± 0.5 10.8 ± 0.4
4j 18.8 ± 0.6 17.6 ± 0.6 16.2 ± 0.5 14.8 ± 0.4 14.6 ± 0.5
4k 17.8 ± 0.5 16.6 ± 0.5 15.4 ± 0.6 14.2 ± 0.5 13.4 ± 0.5
4l 21.4 ± 0.7 20.2 ± 0.6 18.2 ± 0.6 17.0 ± 0.5 17.6 ± 0.6
Gentamicin 21.6 ± 0.6 20.4 ± 0.6 19.0 ± 0.5 18.2 ± 0.5
Chloramphenicol 18.6 ± 0.5 17.8 ± 0.5 15.2 ± 0.5 14.6 ± 0.4
Nystatin 14.8 ± 0.4


All twelve compounds demonstrated measurable inhibitory activity against all five tested organisms, confirming that the tetrazolo[1,5-a]pyrimidine scaffold carries intrinsic broad-spectrum antimicrobial pharmacophoric character. Gram-positive organisms were consistently more susceptible than Gram-negative strains across the entire series, a pattern well-documented for N-heterocyclic compounds and attributable to the additional permeability barrier conferred by the outer membrane of Gram-negative bacteria.

Compounds 4f (19.2 ± 0.7 mm), 4g (20.6 ± 0.6 mm), 4j (18.8 ± 0.6 mm), and 4l (21.4 ± 0.7 mm) all surpassed standard chloramphenicol against S. aureus, with 4l recording the highest ZOI of all the compounds. Against B. subtilis, 4g (19.6 ± 0.5 mm) and 4l (20.2 ± 0.6 mm) exceeded the chloramphenicol reference value (17.8 ± 0.5 mm), further affirming the potency of the acetyl sub-series. Against Gram-negative strains, 4l (18.2 ± 0.6 mm against E. coli) demonstrates that activity extends meaningfully beyond Gram-positive selectivity.

When compared to gentamicin (21.6 ± 0.6 mm, S. aureus), compound 4l (21.4 ± 0.7 mm) achieved near-equivalent activity, a significant finding for a first-generation unoptimised synthetic scaffold. Compound 4g (20.6 ± 0.6 mm) was likewise closely comparable. These observations suggest that the tetrazolopyrimidine core, particularly when bearing a bromothiophene or benzo[d][1,3]dioxol substituent at C-7, achieves a level of antibacterial potency ordinarily associated with aminoglycoside-class reference agents.

In the antifungal results against C. albicans, three compounds 4f (15.8 ± 0.6 mm), 4g (16.4 ± 0.5 mm), and 4l(17.6 ± 0.6 mm) exceeded the nystatin reference standard (14.8 ± 0.4 mm at 10 µg mL−1), with 4lshowing an 18.9% higher ZOI than the standard compound. The methylenedioxy group present in 4f and 4l may facilitate interaction with fungal membrane ergosterol or cell wall biosynthetic enzymes, warranting further mechanistic investigation.

The acetyl sub-series (4g–4l) demonstrated consistently superior activity compared to the carbonitrile sub-series (4a–4f) across all organisms, suggesting that the acetyl group at C-5 plays a favourable role in target engagement or cellular permeability. The benzo[d][1,3]dioxol substituent (4f, 4l) and the 5-bromothiophene moiety (4a, 4g) consistently produced the highest activity, whereas pyrrol-2-yl-bearing compounds 4c and 4i showed low Zone of Inhibition, indicating the importance of substituent lipophilicity and electronic character at C-4 for antimicrobial potency.

The antimicrobial activity of the synthesized tetrazolo[1,5-a]pyrimidine derivatives 4(a–l) was evaluated against Gram-positive bacteria (Staphylococcus aureus and Bacillus subtilis), Gram-negative bacteria (Escherichia coli and Klebsiella pneumoniae), and the fungal strain Candida albicans using the broth dilution method. The minimum inhibitory concentration (MIC) values are presented in Table 4.

Table 4 MICs of the synthesized tetrazolo[1,5-a]pyrimidine derivatives 4(a–l) (µg mL−1)
  Gram-positive Gram-negative Fungal
S. aureus B. subtilis E. coli K. pneumoniae C. albicans
4a 3.12 6.25 12.5 6.25 12.5
4b 3.12 3.12 6.25 6.25 12.5
4c 3.12 6.25 12.5 6.25 12.5
4d 3.12 3.12 25 25 12.5
4e 6.25 12.5 12.5 12.5 6.25
4f 3.12 3.12 3.12 6.25 3.12
4g 3.12 6.25 3.12 6.25 3.12
4h 6.25 3.12 3.12 6.25 6.25
4i 3.12 3.12 3.12 6.25 3.12
4j 3.12 12.5 3.12 6.25 3.12
4k 12.5 12.5 25 25 25
4l 3.12 3.12 6.5 25 12.5
Gentamicin 10 10 10 10
Chloramphenicol 5 5 5 5
Nystatin 10


Among the synthesized derivatives, compounds 4f and 4i exhibited the most potent and broad-spectrum antimicrobial activity with lower MIC values against all tested microbial strains. Compound 4f showed excellent inhibitory activity against S. aureus, B. subtilis, E. coli, and C. albicans with MIC values of 3.12 µg mL−1, while a slightly higher MIC value of 6.25 µg mL−1 was observed against K. pneumoniae. Similarly, compound 4i demonstrated strong antimicrobial efficacy with MIC values of 3.12 µg mL−1 against S. aureus, B. subtilis, E. coli, and C. albicans. Compounds 4g, 4h, and 4j also displayed promising antibacterial activity, particularly against E. coli, with MIC values of 3.12 µg mL−1. Compound 4g further exhibited significant antifungal activity against C. albicans with an MIC value of 3.12 µg mL−1. In contrast, compound 4k showed comparatively weaker antimicrobial activity with higher MIC values ranging from 12.5 to 25 µg mL−1 against all tested strains.

Gram-positive bacterial strains were generally more susceptible to the synthesized compounds compared to Gram-negative strains. Most derivatives demonstrated moderate to strong inhibitory activity against S. aureus and B. subtilis, with MIC values predominantly in the range of 3.12–6.25 µg mL−1. However, certain compounds such as 4d and 4k exhibited reduced activity against Gram-negative bacteria, especially E. coli and K. pneumoniae, with MIC values of 25 µg mL−1. The antifungal screening against Candida albicans revealed that compounds 4f, 4g, 4i, and 4j possessed remarkable antifungal activity with MIC values of 3.12 µg mL−1, which was superior to the standard antifungal drug nystatin (10 µg mL−1). Overall, the synthesized tetrazolo[1,5-a]pyrimidine derivatives demonstrated significant antimicrobial potential, with compounds 4f and 4i emerging as the most active candidates for further pharmacological investigation.

3.3. Anticancer activity

The cytotoxic activity of compounds 4(a–l) was evaluated against the HeLa (cervical carcinoma) and HCT-116 (colorectal carcinoma) cell lines using the MTT assay after 24 h compound treatment. The IC50 values (µM; mean ± SD, n = 3) were determined from dose–response curves (0.1–100 µM) and are presented in Table 5. Quercetin (QCT) was used as the reference standard.
Table 5 Anticancer activity – IC50 values (µM) against the HeLa and HCT-116 cell lines
Compd. IC50 (µM) mean ± SD (n = 3)
HeLa (cervical carcinoma) HCT-116 (colorectal carcinoma)
Reference standard drug; QCT = Quercetin. IC50 = concentration causing 50% inhibition of cell growth determined from dose–response curves (0.1–100 µM). Values are mean ± SD of three independent experiments
4a 24.8 ± 1.1 35.2 ± 1.4
4b 31.2 ± 1.3 40.6 ± 1.5
4c 38.6 ± 1.5 48.2 ± 1.6
4d 27.2 ± 1.2 37.8 ± 1.5
4e 29.8 ± 1.3 39.4 ± 1.4
4f 19.6 ± 0.9 29.4 ± 1.3
4g 15.8 ± 0.8 25.6 ± 1.2
4h 28.4 ± 1.2 38.2 ± 1.4
4i 36.8 ± 1.4 46.4 ± 1.6
4j 22.4 ± 1.0 32.4 ± 1.3
4k 26.0 ± 1.1 36.0 ± 1.4
4l 13.4 ± 0.7 22.6 ± 1.1
QCT 18.8 ± 0.9 30.2 ± 0.8


All twelve synthesised compounds demonstrated dose-dependent antiproliferative activity against both cell lines, with IC50 values ranging from 13.4 to 38.6 µM (HeLa) and 22.6 to 48.2 µM (HCT-116). Compound 4l showed IC50 values of 13.4 ± 0.7 µM (HeLa) and 22.6 ± 1.1 µM (HCT-116) the best performance of the compounds. Compound 4g similarly outperformed quercetin with IC50 values of 15.8 ± 0.8 µM (HeLa) and 25.6 ± 1.2 µM (HCT-116). Compound 4f (HeLa IC50: 19.6 ± 0.9 µM) was comparable to the quercetin reference value, differing by less than one standard deviation. Compound 4j also performed well against HeLa cells (22.4 ± 1.0 µM), approaching quercetin-level activity.

HeLa cells were consistently more sensitive than HCT-116 cells across the entire compound series, suggesting differential susceptibility possibly linked to the higher baseline proliferative rate and distinct metabolic profile of cervical carcinoma cells. Compounds 4c and 4i exhibited the weakest cytotoxicity (IC50 > 36 µM in both lines), mirroring their comparatively lower antimicrobial activity and suggesting a converging structure–activity relationship across both biological assays.

The benzo[d][1,3]dioxol substituent at C-4, present in 4f and 4l, consistently drove the highest potency, consistent with the known role of the methylenedioxy pharmacophore in natural product-derived anticancer agents such as piperlongumine and podophyllotoxin. The bromothiophene moiety in 4g contributed to enhanced cellular activity, likely through increased lipophilicity and membrane permeability facilitating intracellular accumulation. The acetyl sub-series (4g–4l) demonstrated overall superior activity reinforcing the conclusion that the C-5 acetyl group modulates cytotoxic potency favourably. These findings collectively identify 4l and 4g as the primary lead compounds from this scaffold for further anticancer optimisation, with rational structural modifications at the C-4 aryl position offering a direct pathway toward enhanced potency.

4. Conclusion

In summary, an ultrasound-mediated one-pot multicomponent strategy was successfully developed for the synthesis of tetrazolo[1,5-a]pyrimidine derivatives using acetic acid as a green, catalyst-free reaction medium. This approach represents the first reported ultrasound-assisted protocol for this scaffold and delivers superior performance over conventional methods in terms of reaction time (12–15 min), product yield (76–95%), and operational simplicity. The broad substrate scope, encompassing diverse heterocyclic aromatic aldehydes with both malononitrile and acetylacetone as active methylene components, underscores the versatility and generality of the methodology. Biological evaluation across twelve synthesized derivatives revealed broad-spectrum antimicrobial activity against all tested organisms. The acetyl sub-series (4g–4l) consistently outperformed the carbonitrile sub-series (4a–4f), confirming that the C-5 acetyl group plays a beneficial role in target engagement. Among the tested compounds, 4l and 4g – bearing the benzo[d][1,3]dioxol and 5-bromothiophene substituents at C-4, respectively – emerged as the most potent antimicrobial agents with minimal concentrations, with activity approaching that of the clinical reference gentamicin against S. aureus and surpassing nystatin against C. albicans. Anticancer screening further validated these leads, with 4l and 4g achieving IC50 values superior to the quercetin reference against both the HeLa and HCT-116 cell lines. The convergent structure–activity relationship observed across both biological assays highlights the central pharmacophoric importance of the methylenedioxy and bromothiophene groups at C-4. These findings establish the tetrazolopyrimidine scaffold as a promising platform for the development of novel antimicrobial and anticancer agents, warranting further mechanistic investigation and structural optimization. The current study is limited by the absence of normal-cell cytotoxicity analysis and selectivity index evaluation. Future investigations will include normal human cell lines to assess the safety and selectivity of the synthesized compounds for potential therapeutic applications.

Author contributions

Savan S. Bhalodiya: method development, investigation, validation, spectral analysis, writing an original draft, Mehul P. Parmar: writing – review editing, spectral analysis, Shana Balachandran: investigation, biological study, writing – review and editing, formal analysis, Chirag D. Patel: writing – review and editing, formal analysis, Madan Kumar Arumugam: biological study, writing – review and editing, formal analysis, Hitendra M. Patel: writing – review and editing, supervision, method development, investigation, formal analysis, conceptualization.

Conflicts of interest

The authors declare no conflict of interest.

Data availability

The data supporting this article have been included as part of the Supplementary Information (SI). Supplementary information is available. See DOI: https://doi.org/10.1039/d6ma00549g.

Acknowledgements

The authors would like to extend their heartfelt gratitude to the Department of Chemistry, Sardar Patel University, Vallabh Vidyanagar for providing the necessary research facilities. SSB is thankful for the CSIR-NET fellowship (Reference No.: Nov/06/2020(i)EU-V). MPP is thankful to the Knowledge Consortium of Gujarat for the SHODH fellowship (Student Reference No.: 2021016434). CDP is thankful to the National fellowship for scheduled Tribe (Award No.: 202223-NFST-GUJ-00003).

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