Open Access Article
Kristian Pastora,
Ana Rita C. Duarteb and
Jelena Vladic
*b
aFaculty of Technology Novi Sad, University of Novi Sad, Novi Sad, Serbia
bLAQV-REQUIMTE, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal. E-mail: jelenavladic@fct.unl.pt; vladicjelena@gmail.com
First published on 13th January 2026
The growing demand for sustainable extraction approaches has positioned deep eutectic systems (DESs) as promising, and often greener, alternatives to conventional solvents for valorizing algal and cyanobacterial biomass. This systematic review, supported by quantitative data integration and multivariate statistical analysis, analyzes peer-reviewed studies on the recovery of proteins, carbohydrates, lipids, fatty acids, phytosterols, polyphenols, and pigments from microalgae, macroalgae, and cyanobacteria, and highlights the main challenges in applying DESs to biomass processing. To ensure comparability, extraction conditions, DES composition, biomass origin, and assisted extraction techniques were systematically examined, with results normalized across studies. Hydrophilic DESs, typically based on choline chloride, sugars, or glycerol, generally show high efficiency for proteins and phycobiliproteins, whereas hydrophobic systems derived from fatty acids or terpenes favor the extraction of lipids and lipophilic pigments. However, water content, viscosity, and biomass-solvent interactions can significantly modulate these trends, and deviations are reported. Ultrasound-assisted extraction is among the most frequently employed techniques to enhance DES extraction. Principal component analysis revealed clear clustering of algal species and DES formulations according to compound class, confirming polarity-driven selectivity for specific macronutrients, pigments and phenolics. Beyond selective extraction, DESs and natural DESs (NADESs) support biomass pretreatment and stabilization, and can mitigate off-flavors and odors, thus reducing both energy and solvent consumption while aligning with circular-economy principles. Although further research is required to address scalability and standardization, DES-based algal processing holds strong potential as a practical and sustainable route to producing functional ingredients.
Green foundation1. Deep eutectic systems (DESs) are increasingly recognized as sustainable solvents capable of valorizing algal and cyanobacterial biomass, resources with strong potential as renewable and alternative food sources. This review presents a systematic meta-analysis of peer-reviewed studies, critically evaluating advances in DES-based extraction of bioactives and assessing their efficiency, environmental benefits, and limitations.2. The integration of biodegradable, low-toxicity DESs with renewable algal feedstocks directly supports the transition toward greener bioprocessing, circular bioeconomy, and sustainable ingredient production. As both DESs and microalgae represent core elements of green innovation, their combination has wide relevance across food, pharmaceutical, and biorefinery sectors. 3. While DESs hold strong potential as green solvents, further progress is needed to optimize their composition and properties, reduce toxicity, and improve scalability. This review outlines key research frontiers in solvent design and process integration, providing a roadmap for advancing DES-algae systems toward practical, energy-efficient, and industry-relevant green technologies. |
Microalgae and cyanobacteria play a major role in modern biotechnology. Estimates suggest they produce nearly half of the atmospheric oxygen, while their photoautotrophic growth fixes carbon dioxide and thus contributes to lowering the global carbon footprint.1 Unlike higher plants, they lack roots, stems, and leaves, and can be cultivated on nonarable land and in wastewater, avoiding competition with food crops.2,3 In addition, thanks to their high plasticity, they grow in fresh and saline waters, across polar to tropical climates, and over wide pH ranges. Their growth rates are typically five to ten times higher than those of conventional crops, making them highly attractive as a biomass resource.1 Furthermore, cultivation is carried out in open systems such as ponds and raceways as well as in closed systems such as stirred tanks and photobioreactors.
The biomass of microalgae and cyanobacteria is rich in proteins, pigments, and lipids including omega-3 fatty acids. Consequently, they are increasingly incorporated into foods and nutritional products, and their bioactive metabolites are being explored for cosmetic and pharmaceutical applications due to reported antioxidant, anti-inflammatory, antimicrobial, and anticancer activities.4 In agriculture, they are gaining traction as biostimulants and biofertilizers, helping increase yields while reducing pollution.5 Much current research focuses on optimizing cultivation to improve productivity and the economics of industrial scale production.6
Macroalgae or seaweeds comprise multicellular red, brown, and green lineages that inhabit coastal and benthic marine environments.3 They are recognized as valuable industrial feedstocks owing to their polysaccharide content, most notably alginate, agar, and carrageenan, which see widespread use in the food, pharmaceutical, and cosmetic sectors. In addition to polysaccharides, macroalgae are significant sources of iodine, vitamins, and antioxidants. Supply is derived both from wild harvesting and from aquaculture.7
The structural features, biochemical composition, and major application pathways of microalgae, macroalgae, and cyanobacteria have been comprehensively detailed in several recent reviews, which describe cellular organization and the distribution of key metabolites relevant to their valorization.8–12 These studies outline how algae accumulate lipids, proteins, carbohydrates, polysaccharides, and pigments of industrial interest, underpinning their use in food and feed ingredients, nutraceuticals, cosmetics, biofertilizers and biostimulants, environmental remediation, and bioenergy production. Building on this established background, the present work focuses specifically on deep eutectic systems as extraction media for these compounds.
Despite taxonomic differences, all three groups possess substantial ecological and biotechnological potential. Their diversity, cultivation flexibility, and rich chemical profiles position them as key resources for sustainable technologies, especially in the context of climate change, food security, and the transition to renewables. Yet significant hurdles still limit broader industrial uptake. Cultivation remains a major bottleneck, as variable productivity, high costs, and inconsistent yields continue to impede commercialization. Downstream processing poses additional challenges. Conventional extraction methods rely on organic, often toxic solvents, typically requiring multistep, energy intensive operations with long processing times and high costs. These methods are frequently insufficiently selective for target fractions, can generate hazardous waste, and risk residual solvent contamination of final products, which compromises safety and market acceptance. Environmental and occupational health impacts add further concern, and overall biomass utilization often remains suboptimal.13
These constraints underscore the need, beyond cultivation optimization, for new, sustainable processing strategies. Solvents and extraction techniques aligned with green chemistry principles are required to enable efficient, selective, and safe isolation of bioactive molecules without introducing additional environmental or health risks. In this context, green solvents, particularly Deep Eutectic Systems (DESs), have attracted growing attention in recent years. This emerging class of solvents is increasingly viewed as a promising alternative to conventional approaches, with strong potential to support sustainable biomass valorization.
These solvents are attractive because of their low volatility, nonflammability, potential biodegradability, and straightforward preparation, often achieved by simply mixing the components under mild heating without additional solvents.16 Compared with many ionic liquids, which can be costly and synthetically demanding and may raise structure dependent toxicity concerns, DESs based on natural or food grade components are often considered biocompatible and suitable for food, pharmaceutical, and cosmetic applications. The compositional flexibility of DESs enables fine tuning of key physicochemical properties, including viscosity, polarity, and acidity, to match the requirements of specific extraction processes.17
DESs are also well aligned with several United Nations Sustainable Development Goals (SDGs), notably SDG 7 Affordable and Clean Energy, SDG 12 Responsible Consumption and Production, and SDG 13 Climate Action, due to their role in enabling low-impact, energy-efficient processes and facilitating circular valorization of waste and biomass.17,18
One of the key advantages of DESs in extraction process is their selectivity. Tailored combinations of donors and acceptors allow specific hydrogen bonding and other intermolecular interactions with target solutes, so polarity and solvation can be tuned to favor particular classes of bioactives, such as lipids,19 fatty acids,19–25 proteins,20–26 polyphenols,21–27 and alkaloids.22–28 Tuning can also reduce co-extraction of unwanted substances. For example, DES extracts of Fucus vesiculosus contained significantly lower levels of trace elements compared to conventional solvents, resulting in safer extracts.14
Beyond extraction, DESs have also been explored as pretreatment agents for rigid biomass, where they can disrupt cell structures and improve the recovery of intracellular compounds.29–31 In addition to these roles, these mixtures have also shown significant potential in stabilizing media for a variety of molecules, including volatile compounds,23 enzymes,24 and phenolic compounds.25 For example, Vladic et al. showed that a dill extract stabilized in a betaine-lactic acid NADES maintained its chemical profile and preserved bioactivity during storage.26 This stabilizing effect is commonly attributed to the extensive hydrogen bonding network within DESs, which can protect labile compounds from degradation and enhance their chemical stability.27
| Chemical class | Chemical compound | Max concentration (mg per g DW) | Species | Country of origin | DES systems applied | DES molar ratio | Biomass-to-solvent ratio | Extraction method | References |
|---|---|---|---|---|---|---|---|---|---|
| Proteins | Total protein content (TPro) | 387.0 | Palmaria palmata | Spain | Glycerol : Glucose, 25% water |
2 : 1 |
1 : 10 |
PLE | Cokdinleyen et al.44 |
| Total lipid and fatty acid content | Free fatty acids (FFA) | 218.0 | Arthrospira platensis | France | 1,3-Propanediol : octanoic acid : decanoic acid |
1 : 3 : 1 |
1 : 10 |
DAC | Wils et al.51 |
| Total lipid and fatty acid content | Total lipid content (TLip) | 183.0 | Neochloris texensis | Turkey | choline chloride : urea : water |
1 : 2 : 2 |
1 : 20 |
Ultrasonic bath | Ozel et al.38 |
| Individual fatty acids | Arachidonic acid (C20:4n-6) | 117.5 | Porphyridium cruentum | France | 1,3-Propanediol : octanoic acid : decanoic acid |
1 : 3 : 1 |
1 : 10 |
DAC | Wils et al.51 |
| Individual fatty acids | Decanoic acid (C10:0) | 0.14 | Nannochloropsis gaditana | Spain | Choline chloride : fructose : water |
2 : 1 : 2 |
1 : 90 |
Magnetic stirring, water bath | Garcia Soto et al.49 |
| Individual fatty acids | Dodecanoic acid (C12:0) | 0.039 | Nannochloropsis gaditana | Spain | Choline chloride : ethylene glycol : water |
1 : 2 : 1 |
1 : 90 |
Magnetic stirring, water bath | Garcia Soto et al.49 |
| Individual fatty acids | Eicosapentaenoic acid (EPA) | 20.66 | Nannochloropsis gaditana | Spain | Choline chloride : Ethylene glycol |
1 : 2 |
1 : 90 |
Ultrasonic bath | Moreno Martínez et al.19 |
| Individual fatty acids | Eicosatetraenoic acid (C20:4n-3) | 0.85 | Nannochloropsis gaditana | Spain | Choline chloride : ethylene glycol : water |
1 : 2 : 1 |
1 : 90 |
Magnetic stirring, water bath | Garcia Soto et al.49 |
| Individual fatty acids | Hexadecanoic acid (C16:0) | 35.5 | Arthrospira platensis | France | Nonanoic acid : decanoic acid : dodecanoic acid |
3 : 2 : 1 |
1 : 20 |
UAE | Wils et al.51 |
| Individual fatty acids | Hexadecenoic acid (C16:1) | 25.89 | Nannochloropsis gaditana | Spain | Choline chloride : Ethylene glycol |
1 : 2 |
1 : 90 |
Ultrasonic bath | Moreno Martínez et al.19 |
| Individual fatty acids | Myristic acid (C14:0) | 32.46 | Arthrospira platensis | France | Nonanoic acid : decanoic acid : dodecanoic acid |
3 : 2 : 1 |
1 : 20 |
UAE | Wils et al.51 |
| Individual fatty acids | Octadecadienoic acid (C18:2) | 160.0 | Arthrospira platensis | France | 1,3-Propanediol : octanoic acid : decanoic acid |
1 : 3 : 1 |
1 : 10 |
DAC | Wils et al.51 |
| Individual fatty acids | Octadecanoic acid (C18:0) | 32.44 | Arthrospira platensis | France | Nonanoic acid : decanoic acid : dodecanoic acid |
3 : 2 : 1 |
1 : 20 |
UAE | Wils et al.51 |
| Individual fatty acids | Octadecatrienoic acid (C18:3) | 35.0 | Arthrospira platensis | France | 1,3-Propanediol : octanoic acid : decanoic acid |
1 : 3 : 1 |
1 : 10 |
DAC | Wils et al.51 |
| Individual fatty acids | Octadecenoic acid (C18:1) | 19.31 | Arthrospira platensis | France | Nonanoic acid : decanoic acid : dodecanoic acid |
3 : 2 : 1 |
1 : 20 |
UAE | Wils et al.51 |
| Individual fatty acids | Octanoic acid (C8:0) | 0.00552 | Nannochloropsis gaditana | Spain | Choline chloride : fructose : water |
2 : 1 : 2 |
1 : 90 |
Magnetic stirring, water bath | Garcia Soto et al.49 |
| Individual fatty acids | Pentadecanoic acid (C15:0) | 0.052 | Nannochloropsis gaditana | Spain | Choline chloride : ethylene glycol : water |
1 : 2 : 1 |
1 : 90 |
Magnetic stirring, water bath | Garcia Soto et al.49 |
| Phytosterols | Phytosterols (PST) | 3.16 | Codium tomentosum | Portugal | Menthol : octanoic acid |
1 : 1 |
1 : 10 |
Maceration | Resende et al.52 |
| Carbohydrates | Total carbohydrate content (TCC) | 58.34 | Porphyridium purpureum | TMAC : glycerol |
1 : 2 |
1 : 20 |
UAE | Li et al.45 | |
| Carbohydrates | Total sulphated polysaccharide content (TSPC) | 131.0 | Palmaria palmata | Glycerol : glucose, 50% water |
2 : 1 |
1 : 10 |
PLE | Cokdinleyen et al.44 |
| Chemical class | Chemical compound | Max concentration (mg per g DW) | Species | Country of origin | DES systems applied | DES molar ratio | Biomass-to-solvent ratio | Extraction method | References |
|---|---|---|---|---|---|---|---|---|---|
| Carotenoids and chlorophylls | Antheraxanthine | 0.59 | Nannochloropsis oculata | Greece | Betaine : 1,2 propanediol |
2 : 5 |
1 : 10 |
UAE | Gkioni et al.62 |
| Carotenoids and chlorophylls | Astaxanthin | 20.71 | Haematococcus pluvialis | Italy | Thymol : oleic acid |
3 : 1 |
1 : 40 |
Water bath | Pitacco et al.56 |
| Carotenoids and chlorophylls | Auroxanthine | 0.18 | Nannochloropsis oculata | Greece | Betaine : 1,2 propanediol |
2 : 5 |
1 : 10 |
Grounding, UAE | Gkioni et al.62 |
| Carotenoids and chlorophylls | Canthaxanthine | 1.41 | Chromochloris zofingiensis | China | Octanoic acid : decanoic acid |
2.3 : 1 |
1 : 15 |
UAE | Yang et al.57 |
| Carotenoids and chlorophylls | Total carotenoids | 47.03 | Arthrospira platensis | Portugal | Glucose : glycerol : water |
1 : 2 : 4 |
1 : 70 |
Ultrasonic bath | Martins et al.58 |
| Carotenoids and chlorophylls | Chlorophyll a | 39.0 | Chlorella vulgaris | Turkey | Choline chloride : acetic acid |
1 : 2 |
1 : 20 |
Ultrasonic bath | Ozel et al.38 |
| Carotenoids and chlorophylls | Chlorophyll b | 23.4 | Chlorella vulgaris | Turkey | Choline chloride : acetic acid |
1 : 2 |
1 : 20 |
Ultrasonic bath | Ozel et al.38 |
| Carotenoids and chlorophylls | Total chlorophylls | 62.4 | Chlorella vulgaris | Turkey | Choline chloride : acetic acid |
1 : 2 |
1 : 20 |
Ultrasonic bath | Ozel et al.38 |
| Carotenoids and chlorophylls | Fucoxanthin | 22.03 | Tisochrysis lutea | New Zeland | Thymol : dodecanoic acid |
1.25 : 1 |
1 : 25 |
Magnetic stirring | Xu et al.63 |
| Carotenoids and chlorophylls | Lutein | 6.26 | Scenedesmus sp. | China | Fenchyl alcohol : thymol |
1 : 1 |
1 : 50 |
Water bath | Fan et al.39 |
| Carotenoids and chlorophylls | Total pigments | 165.19 | Arthrospira platensis | Portugal | Glucose : glycerol : water |
1 : 2 : 4 |
1 : 70 |
Ultrasonic bath | Martins et al.58 |
| Carotenoids and chlorophylls | Violaxanthine | 2.34 | Nannochloropsis oculata | Greece | Betaine : 1,2 propanediol |
2 : 5 |
1 : 10 |
UAE | Gkioni et al.62 |
| Carotenoids and chlorophylls | β-Carotene | 0.32 | Scenedesmus sp. | China | Fenchyl alcohol : thymol |
1 : 1 |
1 : 50 |
Water bath | Fan et al.39 |
| Phycobiliproteins | Allophycocyanin | 52.0 | Palmaria palmata | Spain | Glycerol : glucose, 50% water |
2 : 1 |
1 : 10 |
PLE | Cokdinleyen et al.44 |
| Phycobiliproteins | B-Phycoerythrin | 43.0 | Palmaria palmata | Spain | Glycerol : glucose, 50% water |
2 : 1 |
1 : 10 |
PLE | Cokdinleyen et al.44 |
| Phycobiliproteins | C-Phycocyanin | 90.85 | Arthrospira platensis | France | Glycerol : glucose |
2 : 1 |
1 : 5 |
Ultrasonic bath | Hilali et al.59 |
| Phycobiliproteins | R-Phycocyanin | 28.0 | Palmaria palmata | Spain | Glycerol : glucose, 50% water |
2 : 1 |
1 : 10 |
PLE | Cokdinleyen et al.44 |
| Phycobiliproteins | R-Phycoerythrin | 13.09 | Porphyra yezoensis | China | Choline chloride : urea, K2HPO2 |
1 : 2 |
Not mentioned | DES-ATPS | Xu et al.63 |
| Chemical class | Chemical compound | Max concentration (mg per g DW) | Species/class | Country of origin | DES systems applied | DES molar ratio | Biomass-to-solvent ratio | Extraction method | References |
|---|---|---|---|---|---|---|---|---|---|
| Polyphenols and related compounds | Ascorbic acid | 0.3 | Fucus vesiculosus | Russia | Glucose : lactic acid : water |
1 : 5 : 3 |
1 : 10 |
Ultrasonic bath | Obluchinskaya et al.54 |
| Polyphenols and related compounds | Caffeic acid | 0.2 | Chlorella vulgaris | Portugal | Choline chloride : 1,3-propanediol, 30% water |
1 : 4 |
1 : 20 |
Liquid nitrogen | Wan Mahmood et al.21 |
| Polyphenols and related compounds | Ferulic acid | 37.74 | Phaeophyceae, Rhodophyceae, Chlorophyceae | USA | Choline chloride : urea |
1 : 2 |
1 : 20 |
Ultrasonic bath | Hashemi et al.66 |
| Polyphenols and related compounds | Gallic acid | 3.2 | Chlorella vulgaris | Portugal | Choline chloride : 1,3-propanediol, 30% water |
1 : 4 |
1 : 20 |
Liquid nitrogen | Wan Mahmood et al.21 |
| Polyphenols and related compounds | Luteolin-7-O-glucoside | 0.9115 | Phaeophyceae, Rhodophyceae, Chlorophyceae | USA | Choline chloride : lactic acid |
1 : 2 |
1 : 20 |
Ultrasonic bath | Hashemi et al.66 |
| Polyphenols and related compounds | Phlorotannins | 71.6 | Fucus vesiculosus | Russia | Choline chloride : lactic acid |
1 : 3 |
1 : 10 |
Ultrasonic bath | Obluchinskaya et al.54 |
| Polyphenols and related compounds | Total phenolic acids | 119.67 | Phaeophyceae, Rhodophyceae, Chlorophyceae | USA | Proline : lactic acid |
1 : 1 |
1 : 20 |
Ultrasonic bath | Hashemi et al.66 |
| Polyphenols and related compounds | Total phenolic compounds | 127.09 | Phaeophyceae, Rhodophyceae, Chlorophyceae | USA | Proline : lactic acid |
1 : 1 |
1 : 20 |
Ultrasonic bath | Hashemi et al.66 |
| Polyphenols and related compounds | p-Coumaric acid | 0.19 | Chlorella vulgaris | Portugal | Choline chloride : 1,4-butanediol, 30% water |
1 : 4 |
1 : 20 |
Liquid nitrogen | Wan Mahmood et al.21 |
This systematic and data-integrated review analyzes the field by linking DES properties with target fractions and process performance, mapping patterns and knowledge gaps, and defining key challenges for wider application of DESs in biomass valorization. We also discuss whether DES can enable efficient valorization of algal biomass, improve acceptance of algal products, and move extraction from laboratory demonstrations to economically and environmentally sustainable technologies. The scope covers DESs applied to proteins, lipids and fatty acids, phytosterols, polyphenols, polysaccharides, and lipophilic and hydrophilic pigments.
Only peer-reviewed articles published in English were included, with no restriction on publication year, as this is a relatively emerging research area. The initial search yielded 48 articles, of which 29 met the inclusion criteria. Excluded studies were either duplicates, non-peer-reviewed, or review articles.
From the selected publications, the following data were manually extracted: species of algae or cyanobacteria, country of cultivation, DES composition, molar ratio of DES components, control solvent (if any), extraction technique, and extraction conditions. Reported yields of extracted compounds were converted to milligrams per gram of dry biomass (mg per g DW) to enable cross-study visualization. However, this harmonization introduces uncertainty because the reviewed studies differed in the initial state of the biomass (fresh, wet paste, lyophilized powder), drying procedures, moisture content, and pretreatment intensity (e.g., bead-beating, sonication, milling). As many articles do not report residual moisture or provide a clearly defined DW basis, these variations can influence calculated yields. Consequently, the quantitative comparisons in this review should be interpreted as trend-based and exploratory rather than as absolute, directly comparable extraction efficiencies.
When authors reported extraction results directly on a dry-weight basis (mg per g DW), these values were used as published. When yields were reported on a wet-weight basis and the moisture content or dry-matter fraction was available, values were converted to mg per g DW. In cases where the biomass was explicitly described as a dry microalgal powder (e.g., lyophilized or spray-dried) but moisture was not reported, the biomass mass was treated as effectively equivalent to dry weight, consistent with the low residual moisture typical of such powders.32 This approximation may introduce a minor error in absolute yields, but this is negligible compared with the much larger variability among species, solvents, and extraction conditions, and it does not affect the interpretation of relative trends.
Data visualization via the Sankey diagram and pie charts, was performed to graphically represent the relationships between cultivation countries, algae and cyanobacteria species, and the chemical classes of extracted compounds. To explore interrelationships among extracted compounds and assess patterns in extraction performance across algal species and DES compositions, correlation analysis heat-mapping were applied to the compiled dataset. Correlation analysis was used to identify statistically significant associations (Spearman's ρ > 0.5, p < 0.05) between compound yields within and across chemical classes, while heat-mapping was applied to visualize dominant trends. The concentration values as mg per g DW were normalized (z-scored) to eliminate scale bias, and heat maps were generated separately for each major compound group (macronutrients, fatty acids and phytosterols, lipophilic pigments, hydrophilic pigments and phenolics) and both for: (i) corresponding micro-, macroalgal and cyanobacteria species; and (ii) DES/NADES formulations used in research articles. These visualizations supported the interpretation of the extracted literature data.
The literature on DES-based algal extraction is shown to be highly heterogeneous, with differences in analytical units, reporting formats, biomass pretreatments, solvent compositions, extraction times, and quantified outputs. As a result, effect size pooling, heterogeneity statistics, and publication bias assessment couldn't be meaningfully applied. For this reason, the study was framed as a systematic review with quantitative data integration. Instead of effect-size meta-analysis, we employed multivariate exploratory tools to identify patterns, solvent–compound relationships, and cross-study trends within this heterogeneous dataset.
Fig. 2 illustrates the chemical structures of the components most frequently used to formulate DESs in the studies reviewed. These compounds represent the diversity of molecules, from quaternary ammonium salts and amino acids to organic acids, polyols, sugars, and terpenoids, that enable eutectic formation.
An analysis of the geographic origin of cultivated algae and cyanobacteria biomass revealed a clear dominance of European countries. As shown in Fig. 3a, 19 out of 29 studies (approximately 66%) sourced biomass from Europe. The most frequently represented countries were Portugal (7 studies) and France (6), followed by Spain and China (3 each). Several other countries were reported only once, including Russia, the USA, the Netherlands, Morocco, Greece, Japan, Turkey, Italy, and New Zealand. This geographic clustering suggests that DES-based extraction studies have primarily relied on biomass readily accessible within European research networks, likely supported by regional collaboration, funding schemes, and regulatory frameworks that actively promote sustainable biotechnologies.
In the global context, total algal production in 2022 reached 37.8 million tonnes, with Asia dominating by a wide margin.28 Europe, by contrast, is a small producer, in 2019, EU aquaculture accounted for less than 1% of global production.33 Nevertheless, algae represent an emerging and strategic sector within the European Blue Bioeconomy, generating an estimated turnover of over €350 million in 2018.34 Although production volumes remain limited, Europe has positioned itself as a hub for pilot-scale cultivation and downstream innovation. The EU has recognized the potential of algae to contribute to food security, climate mitigation, and environmental protection, embedding this vision in key policies such as the Green Deal, the Farm to Fork Strategy, and the Sustainable Blue Economy Communication, with the 2022 EU Algae Initiative setting out concrete actions to support the sector.35,36 According to Gallego et al.37 66 European producers currently market 146 different microalgal-derived products, while another 49 companies provide supporting services and technologies, such as production optimization and scale-up. The most commonly cultivated species is Spirulina (Limnospira spp.), followed by Chlorella spp. and Nannochloropsis spp., mainly for human consumption and cosmetic applications. Photobioreactors remain the dominant cultivation system in Europe. Therefore, the strong representation of European biomass in DES-related studies thus reflects not only local availability but also a broader strategic alignment between cultivation capacity and research on green extraction methods.
The species most commonly used in DES extraction research are also visualized in Fig. 3b. The cyanobacteria Spirulina (Arthrospira platensis) was the most frequently investigated, appearing in 8 out of 29 studies (28%), followed by Chlorella vulgaris (4 studies), Nannochloropsis (4) (N. gaditana, N. oculata, N. oceanica), Scenedesmus (3) (S. incrassatulus and S. protuberans), and Porphyridium (3) (P. purpureum, P. cruentum). Other species such as Tisochrysis lutea, Haematococcus pluvialis, Chromochloris zofingiensis, Neochloris texensis, Palmaria palmata, Codium tomentosum, Porphyra yezoensis, and macroalgae like Fucus vesiculosus and Ascophyllum nodosum were studied less frequently – 1 study each. This taxonomic diversity highlights the wide range of biochemical potentials under investigation for DES-based valorization, though a few species dominate current research trends, due to their robust cultivation profiles and market relevance.
The extracted chemical compounds were classified into eight main categories, as illustrated in Fig. 3c. Carotenoids were the most frequently targeted class (12 studies), where the authors determined: total carotenoid content, β-carotene, lutein, astaxanthin, fucoxanthin, violaxanthine, auroxanthine, antheraxanthine. Following were phycobiliproteins (10 studies), including pigments like C-phycocyanin, R-phycocyanin, allophycocyanin, R-phycoerythrin, and B-phycoerythrin, which are predominantly found in cyanobacteria and red algae. Phenolic compounds appeared in 7 studies, encompassing a wide array of target compound groups, such as total phenolic compounds, total phenolic acids, phlorotannins, as well as specific phenolic acids and other compounds, such as ferulic, gallic, caffeic, p-coumaric acids and luteolin-7-O-glucoside. Both the chlorophylls (including total chlorophylls, chlorophyll a, and chlorophyll b) and fatty acids were targeted each in 6 studies, with fatty acid profiling ranging from short-chain to long-chain polyunsaturated acids (C8:0, C10:0, C12:0, C14:0, C15:0, C16:0, C16:1, C18:0, C18:1, C18:2, C18:3, C20:4, C20:5). Meanwhile, proteins and carbohydrates each accounted for 4 studies, typically evaluated as total protein content or total carbohydrates and sulfated polysaccharides in macroalgae. Total lipids and total phytosterols were targeted less frequently in 3 studies and 1 study, respectively. This distribution reflects the predominance of antioxidant pigments and high-value biomolecules in the current research, driven by their relevance for nutraceutical, cosmetic, and functional food applications.
To visualize the global distribution of algal and cyanobacterial biomass and its valorization through DES-based extraction, a Sankey diagram was created (Fig. 4). The diagram represents a flow from the cultivation country (left), through the species studied (middle), to the extracted chemical class (right). Again, several species such as Arthrospira, Chlorella, Scenedesmus, and Nannochloropsis were shown to be studied in multiple regions, indicating their global relevance and cultivation adaptability. By mapping the links between cultivation regions, algal species, and extracted compounds, the diagram highlights patterns that point both to the adaptability of certain strains and to the strong demand for specific bioactives. Such insights can guide the more targeted development of green extraction methods and biorefinery strategies.
Beyond their role as extraction media, DESs have shown potential as pretreatment agents. By weakening cell walls and membranes, they increase access to intracellular compounds and can improve extraction yields and overall process efficiency. Their composition and water content can be tuned to balance effective disruption with preservation of labile metabolites. Asevedo et al.29 reported that DES pretreatment improved the recovery of phenolic compounds and antioxidant activity from plant biomass, which they attributed to the ability of these solvents to soften rigid cellular architectures and facilitate release. Danilović et al.30 evaluated the pretreatment of Chlorella sp. using choline chloride-based DESs to enhance lipid extraction and underscored the value of DESs as environmentally friendly and cost-efficient media for applications such as biodiesel production and animal feed. Their results showed that choline-chloride DESs form hydrogen bonds with cellulose microfibrils, disrupt the microalgal cell wall network and thus facilitate lipid release. In another study, Asevedo et al. examined choline chloride and urea (1
:
2) both as a pretreatment and as an extraction solvent for Dunaliella salina.29 In a two-step process, DES was first used to disrupt the cell wall, which improved accessibility for a subsequent lipid extraction with an ethanol–hexane mixture and resulted in a lipid recovery of 74.99%. Choline chloride
:
urea enhanced solvent permeation through the cell wall, whereas more acidic systems such as choline chloride
:
oxalic acid altered permeability and degraded carotenoids. The one-pot method employed DES directly for the extraction of carotenoids from wet biomass, achieving a recovery of 84.06%. These results highlight the dual role of DESs in enhancing cell permeability and serving as efficient, green solvents for bioactive compound recovery. More recently, Nemani et al. applied DES-based aqueous two-phase systems (ATPS) to disrupt the tough cell wall of H. pluvialis, a freshwater green microalga known for its high astaxanthin content.31 The use of choline chloride
:
urea (1
:
2) and choline chloride
:
glucose (2
:
1) within ATPS enabled effective cell wall disruption at 60 °C. This pretreatment facilitated nearly complete astaxanthin extraction (99.64%). The authors analysed DES-salt aqueous two-phase systems using binodal curves, tie-line lengths, partition coefficients and Gibbs free energy changes to show how DES composition and temperature control astaxanthin partitioning and cell disruption efficiency. Fan et al. demonstrated that a tailored DES outperformed conventional organic solvents in both the recovery and stabilization of lutein.39 Using a combination of COnductor-like Screening MOdel for Real Solvents (COSMO-RS) screening, molecular dynamics (MD) simulations and symmetry-adapted perturbation theory (SAPT), the authors rationally designed a fenchyl alcohol
:
thymol NADES optimized for carotenoid extraction. Their computational analysis revealed that electrostatic and dispersion components of the hydrogen-bonding network, together with significant van der Waals contacts between the aromatic HBD (thymol) and the ε-ionone ring of lutein, are the dominant drivers of lutein solubilization and stabilization. COSMO-RS, which predicts solubility, activity coefficients and phase behavior from molecular surface charge density distributions, further showed that lutein is substantially more apolar than the individual DES components and disrupts the DES hydrogen-bonding network upon dissolution. This finding indicates that the extraction mechanism cannot be explained by the traditional “like-dissolves-like” principle alone. In addition to solute–solvent interactions, Fan et al. also noted that DES molecules can interact with and perturb cell membranes, thereby facilitating the release and solubilization of intracellular lutein.39
From a process perspective, DES pretreatment offers several practical advantages. Pretreatment and extraction can be carried out in the same solvent system, which reduces unit operations, lowers solvent and energy use, and decreases overall cost compared with running the steps separately. The properties of a DESs can be tuned to match the specific requirements and characteristics of the biomass by adjusting the HBA and HBD composition, water content, viscosity, polarity, and acidity. Also, the same medium is compatible with different processing techniques, such as ultrasound or microwave assistance, to shorten processing time. Importantly, the solvent environment that opens the cell wall can help preserve sensitive metabolites such as pigments, polyunsaturated lipids, and enzymes.
Given the methodological variability among studies, including differences in biomass pretreatment, moisture content, and analytical quantification, mg per g DW yield values of extracted bioactive and nutritive compounds provide a standardized yet imperfect basis for comparison. Thus, the multivariate analysis applied aims to identify qualitative patterns in solvent–compound selectivity rather than deliver precise quantitative benchmarking across studies.
:
urea (2
:
1), choline chloride
:
polyethylene glycol (1
:
2), and choline chloride
:
urea (1
:
2). The study demonstrated that protein extraction efficiency varies significantly across algal species and DES formulations, emphasizing the need for species-specific solvent systems and process optimization. For T. lutea, the highest protein yield was achieved with polyethylene glycol
:
urea, reaching 81% of total protein in the biomass. However, the same solvent had lower performance in C. vulgaris (around 11%), likely due to its rigid cell wall, even after bead-beating pretreatment. Spirulina sp., a cyanobacterium with more accessible proteins, showed a yield of 220–240 mg per g DW, with significant improvement when biomass concentration was increased.Data in Table 1 shows that the maximum protein concentration reported using DES-based extraction was 387 mg per g DW from P. palmata using a glycerol
:
glucose (2
:
1 molar ratio, with 25% water) and pressurized liquid extraction (PLE) method.44 The high yield likely reflects the solvent's strong hydrogen-bonding capacity, a favorable viscosity-polarity balance that promotes penetration into the red algal cell wall, and the pressure-assisted disruption achieved during PLE.
Li et al., for example, found that L-proline
:
glycerol (2
:
5) was most effective for extracting total proteins from P. purpureum, yielding 44.53 mg per g DW under mild ultrasound-assisted conditions.45 Similarly, Ozel et al. used ultrasound-assisted extraction at 50 °C to extract proteins from four microalgal species.38 Their results showed that the acidic DES choline chloride
:
acetic acid was more effective for N. texensis and S. protuberans (up to 29 mg per g DW), while choline chloride
:
urea worked better for C. vulgaris and Schizochytrium sp.
Taken together, these studies highlight that urea- and sugar-based DESs, particularly when combined with techniques such as ultrasound or PLE, can provide high protein recovery. Nonetheless, efficiency strongly depends on algal species, solvent composition, water content, and the extraction method applied.
While protein yield is an important parameter, it does not always fully reflect the quality of the extract. In biotechnological and industrial contexts, the functionality of proteins, especially enzymes, is just as critical as the total amount recovered. Enzymes represent a biologically active fraction of proteins, and their preservation during extraction determines whether the process merely isolates bulk protein or provides extracts with real catalytic and application potential. Among them, carbonic anhydrase (CA) is especially important because it helps convert carbon dioxide into bicarbonate and protons. In microalgae, this enzyme supports photosynthetic efficiency, pH regulation, and inorganic carbon assimilation, making it a key target for extraction.43 The authors studied the extraction of CA as a marker of protein functionality to evaluate whether proteins extracted with DES solvents still maintain their biological activity. Since carbonic anhydrase is a well-known and naturally abundant enzyme in microalgae, it is a useful model to test the preservation of activity after extraction. Three DES formulations (polyethylene glycol
:
urea (2
:
1), choline chloride
:
polyethylene glycol (1
:
2), and choline chloride
:
urea (1
:
2)) were applied to T. lutea, C. vulgaris, and Spirulina sp. under mild conditions (room temperature, 4 hours, stirring) with biomass concentrations of 5 and 10 mg per g DES. After extraction, the samples were dialyzed and analyzed for enzyme activity using a nitrophenol-based esterase assay. Polyethylene glycol
:
urea and choline chloride
:
polyethylene glycol were more effective in preserving enzyme functionality, because they are significantly less viscous, contain more water, and form stabilizing hydrogen-bond networks with proteins. These properties can support improved enzyme mobility and reduced structural stress during extraction. In contrast, choline chloride
:
urea showed limited performance, likely due to its high viscosity and lower hydration ability, which hinder mass transfer and restrict enzyme flexibility, resulting in much lower preserved activity. Among all species, T. lutea showed the highest CA activity when extracted with polyethylene glycol
:
urea, indicating that this solvent system effectively preserves protein functionality.
These findings demonstrate that DESs, particularly PEG- and glycerol-based systems, can be tailored both to enhance protein yields and to ensure the preservation of enzymatic activity. This dual benefit significantly broadens their potential applications. Instead of serving solely as protein extraction tools, DESs could provide enzyme-rich extracts directly applicable in biotechnological and environmental processes. For example, microalgal carbonic anhydrase obtained through DES extraction may be integrated into CO2 capture systems as a sustainable alternative to synthetic catalysts, combining efficiency with environmental safety.
The heatmap in Fig. 5A shows that, based on the values reported in the reviewed studies, Palmaria displays the highest measured levels of total proteins (TP) and total sulphated polysaccharides (TSP). Neochloris, Scenedesmus, and Schizochytrium exhibit the strongest total lipid (TL) signals across the included datasets, with values substantially exceeding those reported for most other species. The reviewed articles also show that Nannochloropsis frequently presents elevated free fatty acids (FFA), while Porphyridium displays the second-highest FFA levels (after Arthrospira) together with moderate total carbohydrates (TC). Arthrospira is represented by a more even distribution of TP, TC, and FFA concentrations across publications. Chlorella shows moderate TP and TC values and comparatively higher TL levels, whereas Tisochrysis appears predominantly characterized by moderate TP, with no measurable carbohydrates, lipids, or FFAs in the reviewed datasets.
The heatmap reflects that, in the studies included in this review, Palmaria yielded the highest extracted TP and TSP concentrations, Neochloris, Scenedesmus, and Schizochytrium produced the strongest extracted TL signals, Porphyridium and Nannochloropsis showed elevated extracted FFA levels, and Arthrospira and Chlorella generated more balanced macronutrient profiles under the specific extraction conditions applied in those studies.
The heatmap in Fig. 5B reveals that the most efficient extraction systems for macronutrients are the glucose
:
glycerol-based DES/NADES, particularly Glu
:
Gly
:
W and Glu
:
Gly
:
Pro
:
W, which exhibit the highest intensities for total proteins (TP) and total sulphated polysaccharides (TSP). Glu
:
Gly
:
W is also unique in extracting measurable total carbohydrates (TC) and moderate total lipids (TL), giving it the broadest macronutrient profile among all tested solvents.
Choline-chloride DESs also show strong extraction potential but with more selective patterns. ChCl
:
U
:
W yields high TL, while ChCl
:
Gly and ChCl
:
PEG extract moderate TP and TC. ChCl
:
LcA, ChCl
:
U, and ChCl
:
Xyl produce noticeable FFA signals, indicating that acidic or polyol-containing DES combinations are particularly suited for recovering free fatty acids.
Hydrophobic DESs, including DcA
:
DoA
:
NoA and DcA
:
OcA
:
PD, display extremely high FFA values, confirming their strong affinity for nonpolar lipid fractions. AcNa
:
LcA and ChCl
:
EG also show elevated FFA extraction, though to a lesser extent.
In contrast, several solvents such as DoA
:
OcA, HxA
:
Im, LevA
:
Men, and LuA
:
Men exhibit minimal extraction across all macronutrient categories, reflecting limited solvating power for polar or high-molecular-weight biomolecules.
The heatmap demonstrates that Glu
:
Gly
:
W and Glu
:
Gly
:
Pro
:
W were the most effective all-round systems (TP, TSP, TC, TL), while hydrophobic DESs (e.g., DcA
:
OcA
:
PD) specialized in FFA extraction in the studies analyzed. ChCl-based DESs showed intermediate extraction efficiencies, with specific systems favoring carbohydrates or lipids.
:
85) to recover lipids from N. oceanica.46 Extraction from wet biomass at 50 °C for 2 hours yielded over 80% efficiency, comparable to traditional methods. While exact values were not provided in units adequate for comparison, this approach supports solvent design as a strategy to enhance solubility and avoid biomass drying steps.Among all reviewed studies, Ozel et al.38 achieved the highest yields of total lipid compounds, investigating four species and finding that the less polar DES combination choline chloride
:
urea
:
water (1
:
2
:
2) gave the best results for N. texensis with a yield of 183 mg per g DW, followed by Schizochytrium sp. with 176 mg per g DW using choline chloride
:
acetic acid
:
water (1
:
2
:
2). This performance may result from the reduced viscosity of the water-diluted urea DES, which improves mass transfer during extraction. Ultrasound-assisted extraction (UAE) further enhances solvent penetration, supporting the high lipid recovery reported. Although the relative performance of urea- and acid-based DESs varied among species, the hydrated choline chloride
:
urea system was particularly effective for N. texensis under the applied conditions. Beyond total lipids, attention has increasingly shifted toward the recovery of specific lipid fractions, especially polyunsaturated fatty acids (PUFAs), which hold exceptional nutritional and biomedical relevance. Fatty acids such as eicosapentaenoic acid and arachidonic acid are highly valued for their roles in cardiovascular protection, inflammation control.47 In addition, these fatty acids are used as precursors for biofuel production.48 Moreno Martínez et al.19 and García-Soto et al.49 evaluated multiple DESs for extracting fatty acids from N. gaditana, a known EPA-rich microalga. Using choline chloride
:
ethylene glycol (1
:
2) and ultrasound pretreatment, Moreno Martínez et al. reported the highest EPA yield at 20.66 mg per g DW, which is the maximum EPA value listed in Table 1.19 Other FAMEs such as C16:1 (25.89 mg g−1) and C18:0 (32.44 mg g−1) were also efficiently extracted under similar conditions. In A. platensis, Wils et al. reported outstanding yields for saturated and unsaturated fatty acids using systems like 1,3-propanediol
:
octanoic acid
:
decanoic acid (1
:
3
:
1) and nonanoic acid
:
decanoic acid
:
dodecanoic acid (3
:
2
:
1).50,51 Notable concentrations included: 160 mg per g DW for octadecadienoic acid (C18:2); 35 mg per g DW for octadecatrienoic acid (C18:3); 35.5 mg per g DW for hexadecanoic acid (C16:0); and 117.5 mg per g DW for arachidonic acid (C20:4) in P. cruentum. Advanced extraction methods like dual asymmetric centrifugation further enhanced recovery, with up to 218 mg per g DW of free fatty acids obtained from Spirulina using propanediol
:
octanoic acid
:
decanoic acid.51 These results demonstrate that hydrophobic DES systems enriched in medium-chain fatty acids (e.g., octanoic, nonanoic, decanoic, dodecanoic acids) are highly effective lipid solvents capable of extracting a broad spectrum of saturated and unsaturated fatty acids from both cyanobacteria and red microalgae. Their strong nonpolar character enhances solubilization of long-chain fatty acids such as C16:1, C18:0, C18:2, C18:3, and C20:4, while the incorporation of amphiphilic polyols, such as 1,3-propanediol, improves fluidity and mass transfer. These DES systems perform particularly well when combined with intensified extraction techniques such as dual asymmetric centrifugation, which further disrupts cell structures and significantly increases the recovery of free fatty acids.
Within the lipid fraction, phytosterols represent another high-value group of compounds. Structurally similar to cholesterol, phytosterols are recognized for their cholesterol-lowering, anti-inflammatory and anticancer properties. Resende et al. applied COSMO-RS computational screening to select DES candidates for extracting phytosterols from the green macroalga Codium tomentosum.52 The most effective system was menthol
:
octanoic acid (1
:
1), which achieved a phytosterol yield of 3.16 mg per g DW under maceration at room temperature for 3 hours, a value that represents the highest phytosterol concentration (Table 1). Notably, this yield exceeded the performance of conventional Soxhlet extraction using dichloromethane (2.86 mg per g DW), proving the potential of hydrophobic DESs for selective extraction of lipophilic molecules like phytosterols. Furthermore, repeated cycles of extraction with the same solvent (without regeneration) led to a 4.4-fold increase in overall phytosterol concentration, supporting the reusability and scalability of the method.
These findings illustrate that DESs can be tailored not only for bulk lipid extraction but also for the selective recovery of high-value fractions such as PUFAs and phytosterols. By combining environmental compatibility with high efficiency, DES-based methods could present a viable pathway toward sustainable utilization of algal lipids in both energy production and health-promoting applications.
The heatmap in Fig. 6A shows that, across the studies included in this review, Nannochloropsis generated the most intense and diverse extracted fatty-acid profile, with consistently strong signals reported for EPA, C16:1, C18:1, C16:0, and C18:2. Porphyridium is represented by exceptionally high extracted levels of arachidonic acid (ARA), appearing as a single dominant maximum not observed in the other datasets. Arthrospira displays moderate but broad signals for several fatty acids, including C18:1, C16:0, C18:3, and C18:2, indicating that the reviewed studies reported a more evenly distributed extraction pattern rather than one dominated by specific compounds. In contrast, Codium shows minimal extracted fatty acids but exhibits a pronounced phytosterol signal, indicating that, in the available publications, extraction efforts yielded sterol-rich rather than fatty-acid-rich profiles from this species.
The heatmap reflects species-specific extraction outcomes reported in the literature: Nannochloropsis with the strongest multi-fatty-acid yields, Porphyridium with the highest extracted ARA, Arthrospira with moderate mixed fatty-acid levels, and Codium with predominantly phytosterol-focused extraction results.
The Fig. 6B shows that choline chloride-based systems such as ChCl
:
EG, ChCl
:
Gly, and ChCl
:
LcA show the broadest extraction capability, with consistently high intensities for C16:1, EPA, C18:1, C16:0, and C18:2, reflecting their strong solvating power for both saturated and unsaturated medium-chain fatty acids. In contrast, more dilute or ternary systems such as ChCl
:
EG
:
W and ChCl
:
F
:
W display uniformly weak extraction across almost all analytes, indicating a strong dilution effect from water or weaker HBD–HBA interactions.
An interesting pattern is observed for DcA
:
OcA
:
PD, which selectively extracts extraordinarily high levels of ARA (C20:4), suggesting a strong affinity of this hydrophobic system for long-chain polyunsaturated fatty acids. Similarly, DcA
:
DoA
:
NoA provides high extraction of C18:3, C18:2, C18:0, and C14:0, highlighting the strong nonpolar character of fatty-acid-based DES systems.
Most DES combinations show very low phytosterol extraction (PS), except Men
:
OcA, which is the only system producing a PS signal, aligning with the expected sterol-solubilizing properties of menthol-based hydrophobic DES. The heatmap shows that choline chloride DESs favored medium-chain and omega-3 fatty acids, whereas fatty-acid-based DESs preferentially extracted long-chain PUFAs, and menthol-based DES selectively targeted phytosterols, reflecting distinct polarity-driven extraction preferences.
:
glucose (2
:
1) with 50% water at 25 °C, achieving a carbohydrate yield of 54.3 µg per mg DW. A second step with PLE at 40 °C enhanced the yield to 131 µg per mg DW (Table 1), surpassing the first step and confirming that residual biomass still contains significant extractable carbohydrates. Although water-based PLE gave the highest yield (141.9 µg per mg DW), the NADES method provided balanced efficiency and better compound preservation, supporting its use in biorefineries.In a similar context, Li et al.45 explored five glycerol-based systems for extracting bioactives from P. purpureum, a red microalga. Using UAE at 25 °C for 10 min (biomass-to-solvent ratio of 1
:
20), they found that DES composed of tetramethylammonium chloride
:
glycerol (1
:
2) gave the highest total carbohydrate content (58.34 mg per g DW, Table 1). This yield is among the highest reported in the literature and is consistent with the values in Table 1, where P. purpureum and other red microalgae often outperform green species in carbohydrate recovery. These results underscore the synergistic effects between amino acid-based or quaternary ammonium salt-based DESs and mild ultrasound conditions, enabling better solubilization of water-soluble polysaccharides and other carbohydrates.
Ozel et al.38 investigated carbohydrate extraction from four microalgae: Schizochytrium sp., C. vulgaris, S. protuberans, and N. texensis, using choline chloride
:
acetic acid (1
:
2) and choline chloride
:
urea (1
:
2) systems. The extraction was performed at 50 °C for 1 hour under UAE with a 20
:
1 solvent-to-biomass ratio. Results revealed that S. protuberans with choline chlorde
:
acetic acid yielded the highest amount (18.32 mg per g DW). The other species yielded lower amounts, especially N. texensis (2.55 mg per g DW), showing a clear species-specific and DES-specific pattern in extraction efficiency. These values align with the data in Table 1, where carbohydrate contents vary significantly depending on microalgal species and solvent type, with urea- and acid-based DESs generally performing better in green algae.
The heatmap in Fig. 6B shows that carbohydrate extraction is highly dependent on DES composition, with only a few systems demonstrating notable efficiency. Glu
:
Gly
:
W is the strongest performer, showing the highest TC intensity among all solvents, indicating that the presence of water in glucose
:
glycerol NADES substantially enhances carbohydrate solubilization. Glu
:
Gly
:
Pro
:
W also exhibits elevated TC values, though slightly lower than Glu
:
Gly
:
W, suggesting that proline contributes additional hydrogen-bonding capacity without compromising carbohydrate recovery.
Moderate carbohydrate extraction is observed for Gly
:
Pro, ChCl
:
Gly, and Bet
:
Gly
:
W, all of which contain glycerol-based hydrogen-bond donors. This highlights the importance of polyol-rich, highly hydrophilic DES systems in interacting with carbohydrate-rich fractions. A weaker but still measurable TC signal appears for ChCl
:
U
:
W, showing that hydration likewise improves the carbohydrate extraction ability of choline–urea systems.
In contrast, the majority of DESs, including hydrophobic combinations (DcA
:
DoA
:
NoA, DoA
:
OcA, DcA
:
OcA
:
PD), acidic DESs (ChCl
:
LcA, ChCl
:
MA, AcNa
:
LcA), and other polyol-based or menthol-based systems, show no carbohydrate extraction at all. This demonstrates that TC recovery requires highly polar, hydrogen-bond-rich, water-containing DES, whereas hydrophobic or weakly polar systems are ineffective.
Among the most investigated carotenoids, astaxanthin has received significant attention due to its potent bioactivities. Fan et al.39 reported obtaining 0.21 mg per g DW of astaxanthin from Scenedesmus sp. using fenchyl alcohol
:
thymol combination. As shown in Table 2, Pitacco et al.56 reported even higher yields of up to 20.71 mg per g DW from H. pluvialis with thymol
:
oleic acid (3
:
1) at 60 °C. Yang et al.57 extracted canthaxanthin from Chromochloris zofingiensis, with yields reaching 1.41 mg per g DW using octanoic
:
decanoic acid and a pre-ground biomass. Fucoxanthin recovery was demonstrated by Xu et al.53 using a thymol
:
dodecanoic acid from T. lutea, with a maximum yield of 22.03 mg per g DW, the highest among all reported DES-based extractions (Table 2). Obluchinskaya et al.54 reported a lower fucoxanthin yield (0.98 mg g−1) from macroalga Fucus vesiculosus, reflecting the influence of biomass type and extraction parameters. Lutein extraction from Scenedesmus sp. using fenchyl alcohol
:
thymol by Fan et al.39 reached 6.26 mg per g DW (Table 2), with minor co-extraction of β-carotene (0.32 mg g−1) and astaxanthin (0.21 mg g−1), highlighting the selectivity of the applied DES system.
The variability in carotenoid yields across studies can be explained by the strong molecular affinity between hydrophobic DES components and the structural features of carotenoids. Carotenoids contain long conjugated polyene chains and, in the case of xanthophylls such as astaxanthin, canthaxanthin and fucoxanthin, additional oxygenated functional groups. Hydrophobic DESs formulated with medium-chain fatty acids (octanoic, decanoic, dodecanoic, oleic acid) or aromatic components such as thymol have physicochemical properties that closely match carotenoid chemistry. Their apolar domains establish strong van der Waals interactions with the extended polyene backbone, which enhances solubilization and stabilizes the carotenoid within the solvent matrix. Aromatic HBDs like thymol also participate in π–π stacking and hydrophobic interactions with the carotenoid rings, further improving affinity and extraction efficiency.
Martins et al.58 reported exceptionally high yields of chlorophyll a and b (56.44 mg per g DW) and total carotenoids (47.03 mg per g DW) from Spirulina with glucose
:
glycerol
:
water (1
:
2
:
4). Hilali et al.59 also reported high total chlorophyll recovery (8.9 mg g−1) with menthol
:
1,2-octanediol, while Wils et al.60 recorded up to 6.9 mg per g DW total chlorophylls and 2.2 mg per g DW carotenoids from Spirulina using glucose
:
glycerol
:
water.
Ozel et al.38 found that choline chloride
:
acetic acid enabled maximum recovery of carotenoids (33.55 mg per g DW) and chlorophylls (60.4 mg per g DW) from S. protuberans, emphasizing the role of acidic DES in pigment solubilization. In contrast, Fernandes et al.61 showed that ionic liquids were less efficient relative to ethanol control for both chlorophylls and carotenoids.
In terms of violaxanthin and antheraxanthin, Gkioni et al.62 observed superior recovery using ethanol compared to betaine:1,2-propanediol from N. oculata (Table 2), suggesting a performance gap still exists between DES and conventional solvents for certain xanthophylls.
These results show that hydrophilic–amphiphilic DESs such as glucose
:
glycerol
:
water are able to solubilize chlorophylls and xanthophylls through extensive hydrogen bonding, while hydrophobic DESs based on menthol or medium-chain diols penetrate thylakoid membranes and interact strongly with pigment hydrophobic domains. The superior recovery of violaxanthin and antheraxanthin in ethanol highlights that, for some epoxy-containing xanthophylls, conventional solvents still provide a more compatible solvation environment than current DES formulations.
Despite that, the reviewed studies confirm the versatility and tunability of DES for pigment extraction. While solvent composition and extraction parameters significantly impact yield and selectivity, the combination of DES with techniques like ultrasound, PEF, or biomass pretreatment provides a sustainable alternative to organic solvents. Continued optimization is needed to close the performance gap for some pigments.
The heatmap in Fig. 7A shows that, across the studies included in this review, Arthrospira produced the strongest overall extracted pigment intensities, particularly for total chlorophylls (TChl), total carotenoids (TCar), and total pigments (Tpig). Chlorella and Neochloris also show prominent extracted chlorophyll profiles, with high reported levels of chlorophyll a (Chla) and chlorophyll b (Chlb). Scenedesmus displays a similar chlorophyll pattern, accompanied by low-to-moderate extracted lutein (Lut) and β-carotene.
Distinct single-pigment maxima are also evident in the dataset. Haematococcus shows a strong isolated signal for astaxanthin (Ast), while Tisochrysis and Fucus are characterized by high extracted fucoxanthin (Fx), with Tisochrysis exhibiting the highest Fx concentration reported. Nannochloropsis shows moderate extracted levels of β-carotene, violaxanthin (Vio), auroxanthin (Aur), and antheraxanthin (Ant), but negligible chlorophylls. In contrast, Schizochytrium and Porphyridium exhibit very low or absent pigment extraction.
The heatmap reflects extraction outcomes reported in the reviewed studies: chlorophyll-rich profiles for Chlorella, Neochloris, and Scenedesmus; strong fucoxanthin extraction for Tisochrysis and Fucus; and a distinct astaxanthin-focused extraction for Haematococcus.
The heatmap in Fig. 7B reveals that AcA
:
ChCl and ChCl
:
U
:
W show the strongest extraction of chlorophyll a (Chla), chlorophyll b (Chlb) and total chlorophylls (TChl), indicating that choline-chloride systems with acidic components or urea support efficient solubilization of chlorophylls. These same systems also produce notable extraction of total carotenoids (TCar), confirming their broader pigment compatibility.
Highly selective extraction behaviors are evident among hydrophobic DES combinations. DoA
:
Thy (dodecanoic acid: thymol) demonstrates a pronounced affinity for fucoxanthin (Fx). Similarly, Ger
:
OleA (geraniol
:
oleic acid) extracts substantial quantities of astaxanthin (Ast), forming the clearest astaxanthin-specific cluster among all DES tested. This indicates strong π–π and hydrophobic interactions capable of stabilizing ketocarotenoids.
Fen
:
Thy shows moderate extraction of lutein (Lut) and low levels of β-carotene, confirming its role as a mixed carotenoid-solubilizing system. Other fatty-acid-based DESs (DcA
:
DoA
:
NoA, DcA
:
OcA
:
PD, DoA
:
OcA) demonstrate negligible pigment extraction, revealing their limited solvating ability for most pigments under the studied conditions.
A unique pattern is observed for Glu
:
Gly
:
W, which produces extremely high signals for TChl, TCar, and especially total pigments (Tpig), the most intense value in the entire dataset. This suggests that glucose-based DES diluted with water forms a highly effective medium for general pigment solubilization.
The heatmap demonstrates that chlorophylls were best extracted by choline-chloride and glucose-based DES, fucoxanthin by DoA
:
Thy, astaxanthin by Ger
:
OleA, and lutein by Fen
:
Thy, highlighting a strong dependence of pigment recovery on DES polarity and hydrogen-bonding structure.
Recent studies have explored the use of DESs, particularly NADESs, as green alternatives for phycobiliprotein extraction. A. platensis has been the most widely studied biomass, with glycerol
:
glucose (2
:
1) and glucose
:
glycerol
:
water (1
:
2
:
4) systems demonstrating high C-PC yields of up to 90.85 mg g−1 and 61.72 mg per g DW under UAE at mild temperatures, as shown in Table 2.58,59 Wils et al.60 also showed that hydrophilic DES could extract up to 39.6 mg per g DW of C-PC, outperforming many conventional solvents. Biphasic DES systems further enhanced selectivity and purity, as demonstrated by Pereira et al.65 who achieved a 99% extraction efficiency of C-PC using a biphasic system composed of decanoic acid
:
thymol (2
:
3) and a phosphate buffer solution (PBS). They suggested that the salting-out effect of PBS, together with the hydrophobicity of the synthesised DES, played a key role in C-PC partitioning. Red microalgae, such as P. purpureum and P. palmata, have also shown promise as sources of phycoerythrins. Li et al.45 reported 7.32 mg per g DW of B-PE from P. purpureum using L-proline
:
glycerol under mild UAE conditions, while Van Gheluwe et al.64 achieved 12.5 mg per g DW using glycerol-based DES also enhancing pigment stability.
Notably, Xu et al.63 extracted R-phycoerythrin R-PE at 13.09 mg per g DW with a high purity of 3.825 using a choline chloride
:
urea-based aqueous two-phase system, further validating the potential of DES-based systems in high-purity pigment recovery. In that study, purity is defined as the absorbance ratio A565/A280, and the authors indicate that values ≥3.0 correspond to drug-grade; thus, 3.825 meets this criterion. Cokdinleyen et al.44 achieved particularly high yields of B-PE (43 mg per g DW), APC (52 mg per g DW), and R-PC (28 mg per g DW) from P. palmata using PLE with glycerol
:
glucose (Table 2). The favourable performance of DES for phycobiliprotein extraction can be attributed to their hydrophilic nature, strong hydrogen-bonding capacity, and ability to stabilize protein–chromophore complexes. Glycerol
:
glucose systems provide an ideal polarity–viscosity balance for solubilizing C-PC and other PBPs while preserving structural integrity under mild UAE conditions. Biphasic DES systems further enhance purity through selective partitioning driven by salting-out and hydrophobic phase separation. Proline- and glycerol-based NADES outperform in stabilizing sensitive phycoerythrins, while ChCl
:
U ATPS enables drug-grade purity due to preferential PBP partitioning. High-pressure PLE improves extraction from tougher red algal matrices, resulting in some of the highest reported B-PE, APC and R-PC yields.
The heatmap in Fig. 8A shows that, across the studies included in this review, Arthrospira yields the most intense extracted signal for C-phycocyanin (C-PC), representing the highest single phycobiliprotein value in the dataset. Palmaria displays a distinctly different pattern, with high extracted concentrations of allophycocyanin (APC), R-phycocyanin (R-PC), and B-phycoerythrin (B-PE), resulting in the most diverse phycobiliprotein profile reported among the analyzed species.
Porphyra exhibits a selective moderate extraction of R-phycoerythrin (R-PE), with no measurable levels of other phycobiliproteins in the reviewed studies. Porphyridium shows a moderate extracted signal for B-phycoerythrin (B-PE) as its only detected phycobiliprotein.
The heatmap reflects distinct extraction outcomes within species: Arthrospira is represented by strong C-PC extraction, while Palmaria, Porphyra, and Porphyridium show profiles dominated by PE and/or APC in the reviewed publications.
The heatmap in Fig. 8B reveals that the most efficient and broad-spectrum system is Glu
:
Gly
:
W, which shows the highest intensities for C-phycocyanin (C-PC), R-phycocyanin (R-PC), allophycocyanin (APC) and B-phycoerythrin (B-PE). This makes it the only DES capable of extracting all major phycobiliprotein classes at high yield, indicating that glucose
:
glycerol DES diluted with water forms an exceptionally effective hydrophilic environment for solubilizing these water-soluble proteins.
Two other glucose–glycerol-based systems show notable but more selective extraction patterns. Glu
:
Gly
:
Pro
:
W displays strong recovery of R-PC, APC, and B-PE, while Glu
:
Gly and Glu
:
Gly
:
Pro moderately extract C-PC and B-PE, showing that the presence of proline or water adjusts pigment specificity.
The betaine
:
glucose
:
glycerol systems also exhibit distinct extraction behavior. Bet
:
Glu
:
Gly and Bet
:
Gly extract C-PC efficiently and show moderate activity toward B-PE, while their water-containing counterparts (Bet
:
Glu
:
Gly
:
W, Bet
:
Gly
:
W) demonstrate higher affinities for R-PC and APC, suggesting that hydration enhances the solubility of red-shifted phycobiliproteins.
Other DESs display more restricted extraction. DcA
:
Thy (hydrophobic) shows only low recovery of C-PC, and Gly
:
Pro moderately extracts C-PC and B-PE, while systems such as ChCl
:
Gly, Gly
:
TMAC, DoA
:
OcA, and fatty-acid-based mixtures show minimal or no phycobiliprotein extraction. ChCl
:
U stands out as the only DES extracting R-phycoerythrin (R-PE) specifically, though at moderate intensity.
The heatmap demonstrates that the strongest phycobiliprotein extraction is achieved by highly polar, hydrogen-bond-rich DESs, especially Glu
:
Gly
:
W, while fatty-acid-only hydrophobic DESs show limited recovery.
:
2 under UAE. Wan Mahmood et al.21 extracted 3.2 mg per g DW of gallic acid and 0.2 mg per g DW of caffeic acid from C. vulgaris using choline chloride
:
1,3-propanediol (1
:
4) with 30% water, while p-coumaric acid reached 0.19 mg per g DW using a 1,4-butanediol-based system. These results indicate the effectiveness of polyol- and urea-based DES for extracting moderately polar phenolic acids. Phenolic acids possess both polar functional groups (–OH, –COOH) and hydrophobic aromatic rings, making them well suited for extraction by DES with strong hydrogen-bonding capacities and medium polarity. Urea- and polyol-based DES form dense hydrogen-bond networks with phenolic hydroxyl and carboxyl groups, while added water reduces viscosity and improves mass transfer under ultrasound. Urea also disrupts phenolic–polysaccharide linkages in algal cell walls, enhancing release and resulting in the high yields observed across multiple studies.Flavonoids, which underpin many antioxidant, anti-inflammatory, and antimicrobial effects, also respond strongly to solvent design and process choice (Table 3). Consistent with this selectivity toward polyphenol subclasses, Hashemi et al.66 recovered 0.91 mg per g DW of luteolin-7-O-glucoside from native mixed algae using choline chloride with lactic acid at 1
:
2, pointing to the value of organic acid-based DES for glycosylated flavonoids. Furthermore, Hashemi et al.66 reported a maximum of total phenolic content (TPC) 127.09 mg GAE per g DW using proline
:
lactic acid (1
:
1) on mixed native algae. In Spirulina, Martins et al.58 obtained 36.50 mg GAE per g DW with a glucose
:
glycerol
:
water mixture (1
:
2
:
4) under ultrasonication, while Ozel et al.38 reported 33.44 mg GAE per g DW in S. protuberans extract using choline chloride
:
acetic acid (1
:
2). Thus, organic acid-based DES such as ChCl
:
lactic acid show good affinity for glycosylated flavonoids likely due to their high polarity and strong H-bonding networks. Proline in systems like Pro
:
LcA contributes additional H-bond donor/acceptor sites and enhances solvent polarity, facilitating solvation of polar phenolics.
Within brown algae, phlorotannins merit separate attention because they are unique to this group and often drive bioactivity. Obluchinskaya et al.54 reported 71.6 mg per g DW of phlorotannins from Fucus vesiculosus using choline chloride
:
lactic acid (1
:
3), an outcome that aligns with the strong affinity of lactic acid-based DES with moderate water content for hydrophilic phenolics in macroalgal tissues.
Furthermore, antioxidant activity is closely linked to phenolic content, Hashemi et al.66 observed antioxidant activity measured via DPPH and ABTS correlating with high TPC values, while Fassi Fihri et al.67 demonstrated that DES extracts could reach IC50 values of 3.98 mg mL−1 and antibacterial MICs of 0.25 mg mL−1, highlighting the multifunctional application of DES-based phenolic extractions in health and biorefinery.
The heatmap in Fig. 9A shows that, across the studies included in this review, the macroalgae group exhibits the strongest overall extracted phenolic profile, with exceptionally high reported values for total phenolic acids (TPA), total phenolics (TPC), and ferulic acid (FA). Fucus also displays strong phenolic extraction, particularly for phlorotannins (PT), which represent the highest PT values reported among all species in the dataset.
Chlorella presents a moderate but comparatively diverse extraction pattern, with measurable levels of TPC, gallic acid (GA), and p-coumaric acid (p-CA), making it the only species with multiple individual phenolics detected in addition to TPC. Scenedesmus shows a single pronounced signal for TPC, indicating that although its extraction profile is less diverse, substantial total phenolic content was still obtained in the reviewed studies.
In contrast, Ascophyllum, Nannochloropsis, Neochloris, and Schizochytrium exhibit very limited phenolic extraction, with almost no detectable individual phenolics, except for the PT signal observed for Ascophyllum.
The heatmap reflects that the reviewed studies report the strongest phenolic extraction for brown macroalgae (macroalgae group, Fucus), whereas green microalgae yield more modest and selective phenolic profiles under the extraction conditions applied.
The heatmap in Fig. 9B demonstrates that the most efficient and broad-spectrum systems are ChCl
:
LcA, ChCl
:
MA, ChCl
:
U, ChCl
:
Xyl, and LcA
:
Pro, which all show intense signals for total phenolics (TPC) and total phenolic acids (TPA). Among these, LcA
:
Pro exhibits the highest TPC value, while ChCl
:
U and ChCl
:
MA display the strongest TPA intensities, indicating that choline-chloride systems paired with organic acids are highly effective in liberating phenolic fractions.
A clear and unique pattern is observed for ChCl
:
LcA, which is the only system showing strong extraction of phlorotannins (PT). Glu
:
LcA
:
W and ChCl
:
MA also produce substantial PT levels, although lower than ChCl
:
LcA, confirming that lactic-acid-based DESs favor phlorotannin solubilization.
Hydrated DES systems (ChCl
:
Gly
:
W, ChCl
:
EG
:
W, BDO
:
ChCl
:
W, ChCl
:
PDO
:
W) show increased extraction of specific minor phenolics such as gallic acid (GA) and caffeic acid (CA), highlighting the beneficial role of water in enhancing the extraction of small polar phenolics.
On the other hand, systems such as Bet
:
PD, CA
:
ChCl, ChCl
:
Gly, and hydrophobic mixtures (e.g., DcA
:
Thy) show only low or negligible extraction of phenolic compounds.
The heatmap demonstrates that acidic choline-chloride DES (ChCl
:
LcA, ChCl
:
MA, ChCl
:
U) and lactic-acid-based NADES (LcA
:
Pro, Glu
:
LcA
:
W) were the most effective systems for extracting bulk phenolic fractions such as TPC, TPA, and PT. In contrast, several hydrated DES formulations (e.g., BDO
:
ChCl
:
W, ChCl
:
PDO
:
W) show comparatively higher signals for small individual phenolics such as GA and CA, indicating that added water can enhance the recovery of low-molecular-weight polar compounds in specific solvent compositions.
:
glycerol (1
:
8) system demonstrated the highest ascorbic acid yield, reaching 3.37 mg per g DW. This value surpassed the one obtained using conventional ethanol extraction, which yielded 2.73 mg per g DW. The results underline the superior extraction capacity of the NADES system, attributed to its enhanced hydrogen-bonding interactions and polarity compatibility with ascorbic acid. These findings reinforce the potential of NADES as effective alternative to traditional solvents in extracting water-soluble vitamins from microalgal biomass.The box-plot in Fig. 10 provides a comprehensive overview of the dispersion and central tendencies of compound concentrations reported across multiple studies employing DES- and NADES-based extraction from algae and cyanobacteria. Each box illustrates the interquartile range (IQR), median and standard error, with whiskers showing data dispersion and potential outliers. The box width is proportional to the number of studies reporting data for each compound, reflecting the research coverage and frequency of extraction in the literature. Considerable variability is observed in compound classes, reflecting both the physicochemical diversity of target metabolites and the heterogeneity of solvent systems and extraction conditions used.
![]() | ||
| Fig. 10 Box plots representing the distribution of extracted bioactive compounds (mg per g DW) across all studies included in the review. | ||
Lipophilic metabolites, such as carotenoids, chlorophylls and total lipids display broad interquartile ranges and a high frequency of outliers, indicating that extraction efficiency is highly dependent on solvent hydrophobicity and hydrogen-bonding capacity. Such variability can be attributed to differences in DES composition, particularly the use of fatty acid-based or alcohol-based hydrogen bond donors, and to the different pretreatment methods applied to disrupt cell walls (e.g., ultrasonication, microwave assistance or high-shear mixing).
Hydrophilic compounds, such as proteins, carbohydrates and phenolic acids tend to show narrower distributions, which implies more consistent recoveries across studies and greater robustness of polar formulations for these analytes. Polyphenolic compounds exhibit moderate dispersion, suggesting that DES acidity and water content strongly modulate their solubility and stability during extraction. The relatively high median values for total phenolics further confirm that choline chloride-based DESs containing organic acids (lactic, malic, or citric acid) or polyols (glycerol, glucose) provide optimal extraction environments for these molecules.
Total proteins and total lipids exhibit the highest median extraction yields, often exceeding 100 mg per g DW, and in some cases approaching or surpassing 300 mg per g DW, highlighting the ability of DESs to efficiently solubilize macromolecules with amphiphilic character. Total phenolics also show moderate-to-high medians (10–60 mg per g DW), consistent with the strong affinity of acidic and polyol-based DES for polar antioxidant compounds. The largest overall variability is observed for total proteins, with whiskers extending beyond 350 mg per g DW, reflecting both biological heterogeneity among species and methodological diversity in extraction conditions.
However, specific pigments (lutein, fucoxanthin, β-carotene) and minor phenolic acids (ferulic, caffeic, p-coumaric) are represented by narrower boxes, indicating fewer studies and lower extract concentrations (typically <10 mg per g DW). This limited data coverage suggests underexplored compound classes and potential gaps in the literature.
The Spearman's rank correlation analysis revealed several statistically significant (p ≤ 0.05) associations among the analyzed compounds, indicating non-random co-extraction behaviors across the reviewed studies. Strong positive correlations (rs > 0.7) were observed primarily among compounds belonging to similar polarity domains and biochemical families (Fig. 11). Lipophilic compounds, such as total lipids, free fatty acids, total carotenoids and chlorophyll a/b showed significant positive inter-correlations, suggesting that solvents optimized for hydrophobic interactions (particularly fatty-acid- or alcohol-based DESs) facilitate simultaneous extraction of pigments and lipid fractions.
Conversely, negative or near-zero correlations (rs < −0.3) occurred between highly polar metabolites (proteins and polysaccharides) and nonpolar lipid or pigment classes, reflecting distinct solubility requirements and limited overlap of DES systems capable of efficiently recovering both hydrophilic and hydrophobic components. Within the phycobiliprotein group, moderate positive correlations between C-phycocyanin, R-phycocyanin and phycoerythrins indicate co-extraction under similar aqueous NADES compositions, consistent with their shared structural and polarity features. This separation suggests that aqueous or polar NADES (e.g., choline chloride-glycerol or -glucose systems) effectively extract water-soluble proteins and pigments but perform poorly for lipophilic compounds.
Additionally, moderate positive correlations between certain fatty acids (octadecadienoic, eicosapentaenoic, and arachidonic acids) reflect their co-occurrence within similar lipid fractions and their co-extraction under hydrophobic DES systems. On the contrary, phenolic acids (ferulic, caffeic, p-coumaric and gallic acids) exhibited only sporadic or weak correlations with other compound classes, which might suggest that their extraction is highly sensitive to solvent acidity and water content rather than shared solubility patterns.
These results quantitatively prove the selective nature of DES-extraction technologies, where each solvent family favors a distinct group of compounds, while cross-class correlations remain limited due to differing solvation mechanisms.
One of the main drawbacks limiting the practical application of DESs is their high viscosity, which results from strong intermolecular interactions such as hydrogen bonding, van der Waals forces, and ionic interactions. These interactions can reduce molecular mobility, hinder mass transfer, and complicate downstream handling.68 A widely applied strategy to mitigate high viscosity is the controlled addition of water. Hydration progressively alters the supramolecular organization of DESs. Gera et al.69 showed that water addition causes a gradual depletion of urea from the interface of the choline chloride
:
urea (1
:
2) DES, whereas at water contents above 40 wt% the surface undergoes an abrupt reorganization in which choline ions are displaced into the bulk and water accumulates at the interface; at water fractions above 60 wt% the interfacial spectrum becomes indistinguishable from pure water. Consistently, Benítez-Correa et al.70 observed that viscosity decreases sharply in ChCl-based DESs upon water addition, and FTIR spectra showed shifts of O–H stretching bands toward higher frequencies, indicating a weakening of HBA–HBD hydrogen bonding. However, excessive dilution (>50% v/v) disrupts the supramolecular structure required for DES functionality,71 and even moderate hydration (≤40%) may reduce hydrogen-bond density and solubilization capacity.64 On the other hand, water molecules may also form stabilizing hydrogen bonds with metabolites, thereby protecting sensitive compounds. Another challenge is the intrinsic hygroscopicity of DESs, which may introduce variability during handling and storage.68
In addition to structural changes, the dynamic behavior of DESs, including diffusion, relaxation times, and hydrogen-bond lifetimes, also influences extraction performance. Monteiro et al.72 demonstrated that hydration of a betaine
:
glycerol DES progressively depletes Bet–Gly and Gly–Gly coordination shells, and that a major structural transition occurs at approximately 30 wt% water, where the second solvation shell collapses and new water-like hydration shells emerge. Similarly, Bhattacharjee et al.73 reported that the hydrogen-bond network characteristic of their eutectic system is maintained up to roughly 40 wt% water, whereas higher hydration disrupts the native structure. These findings indicate that hydration induces concurrent structural reorganization and dynamic changes, both of which affect solute mobility and thereby contribute to mass-transfer behavior relevant for extraction.
Several approaches have been reported to mitigate the high viscosity of DESs. Increasing temperature is highly effective: Savi et al.74 showed that the viscosity of citric-acid/sucrose DESs decreases steadily with increasing temperature and follows Arrhenius-type behavior. Compositional tuning provides another means of viscosity control. Mero et al.75 demonstrated that increasing the fraction of the hydrogen-bond donor (from 1
:
2 to 1
:
4) decreases viscosity across choline- and betaine-based DES families, and that the identity of both HBA and HBD strongly influences baseline fluidity. The use of low-viscosity organic co-solvents offers additional flexibility. Duarte de Alencar et al.76 reported that methanol, isopropanol, and DMSO substantially reduce DES viscosity, in many cases by several orders of magnitude, based on an extensive dataset of 1618 measurements. Viscosity can also be modulated through molecular-level design. Jančíková et al.77 highlighted that variations in HBA and HBD identity, including acidity, modify polarity, hydrogen-bond strength, and nanostructure, thereby shaping fluidity. Complementary machine-learning analysis showed that viscosity is strongly governed by HBA/HBD molar ratio and functional-group composition, confirming that fluidity can be engineered through rational structural modification.78
Besides modifying physicochemical properties, operational strategies can also help alleviate the practical consequences of high viscosity. Moderate temperature elevation and conventional mechanical agitation do not change the intrinsic viscosity of DESs but can reduce mass-transfer limitations by improving solvent–matrix contact and accelerating diffusive transport. In addition, assisted extraction methods such as UAE and PLE can compensate for the limited diffusivity of viscous DESs by enhancing cell disruption, increasing solvent penetration, and boosting mass-transfer rates.44
The suitability of extraction methods depends strongly on the physicochemical behavior of DESs and the structural properties of algal and cyanobacterial biomass. Stirred-batch extraction is simple and widely used but can suffer from slow mass transfer when DES viscosity is high. UAE helps overcome this limitation, acoustic cavitation disrupts cells and enhances solvent penetration,79 and UAE–DES extraction has been shown to outperform DES-based batch methods in yield, energy use, and processing time.80 Microwave-assissted extraction (MAE) provides rapid energy transfer and can accelerate extraction, although careful control is needed to avoid degradation of thermolabile compounds such as carotenoids.81,82 PLE further improves mass transfer by using elevated temperature and pressure to reduce viscosity and increase solubility, enabling efficient extraction in short times with low solvent volumes.83 Overall, UAE and PLE are well suited for viscous DESs, whereas MAE offers rapid extraction but requires attention to thermal sensitivity. Batch extraction remains useful for initial screening but is generally less efficient for rigid biomass.
A further technical limitation of DESs arises in analytical processes, such as gas chromatography (GC), particularly when the solvent remains present in the final extract. Certain DESs, especially those formulated with fatty acids or terpenes, are poorly compatible with GC due to their low volatility and high abundance in the extract. Namely, DES constituents can dominate the chromatogram, producing broad solvent bands that overlap target analytes causing baseline drift, coelution, and unreliable quantification.84 In addition, incomplete evaporation of DESs (that are low volatile systems) in the injector may lead to column contamination. Furthermore, the high viscosity of DESs complicates precise and reproducible injection at the microliter scale, while their elevated boiling points can hinder solvent evaporation, allowing volatile analytes to elute prematurely. Some DES constituents may even thermally degrade before reaching the column, creating additional background noise. Collectively, these effects compromise resolution and detection accuracy.
Proposed solutions include selective mass spectrometers, or the introduction of glass wool or packing material in the injector liner to stabilize evaporation. Alternatively, careful selection of DES components that do not interfere with analytes under investigation can minimize chromatographic overlap.85 Nonetheless, due to the dominance of solvent peaks, back-extraction into a volatile organic solvent prior to GC injection is often recommended, or, when dealing with DESs based on fatty acids, replacing GC with LC-based analytical methods.
Toxicity represents another barrier to widespread adoption, especially of DESs. Factors influencing cytotoxicity include charge delocalization through hydrogen bonding, synergistic effects during DES formation, molar ratio, pH, viscosity, and interactions with cellular intermediates.68 For instance, DESs based on organic acids such as citric acid and malonic acid have been shown to increase cytotoxicity and should therefore be applied with caution and subjected to comprehensive toxicity evaluation. Nonetheless, NADES generally display lower acute toxicity profiles compared to conventional DESs.86 Still, regulatory acceptance remains limited. For instance, choline chloride, one of the most common HBAs, is banned in cosmetic formulations in the EU.64 This has stimulated interest in safer alternatives such as betaine, sugars, and glycerol.
Furthermore, their sustainability has been questioned. Whether they represent genuinely green solvents or simply a research trend can only be established through rigorous ecological and economic assessment. Recent quantitative sustainability assessments reinforce these concerns. A cradle-to-gate life-cycle assessment (LCA) demonstrated that most of its global warming potential, eutrophication, acidification, and toxicity burdens arise not from DES formation itself, but from the energy-intensive upstream synthesis of choline chloride and urea. As a result, the DES for example exhibited lower impacts than dichloromethane and ethyl acetate, but higher impacts than methanol and ethanol, contradicting the common assumption that DESs are intrinsically sustainable.87 However, substituting constituents with natural metabolites does not guarantee improved environmental profiles. In the same study, citric-acid-based DES displayed the highest impacts across all LCA categories, driven by water consumption and CO2 emissions during citric acid fermentation. These findings show that sustainability is not an inherent property of DESs as many common precursors (e.g., choline chloride, malonic acid) are fossil-derived, energy-intensive, or poorly biodegradable, and toxicity and biodegradability vary widely among formulations.88 Overall, DES sustainability is highly formulation-dependent, and their “greenness” must be evaluated case by case rather than presumed based on low volatility or natural origin.
DESs, particularly NADESs, which are generally recognized as safe, may remain in the final extract intended for food, cosmetic, or pharmaceutical applications, a feature that represents one of their main advantages. Yet, when their removal is necessary, the process may be technically demanding and costly, depending on solvent composition and extract properties.
There is no universal DES that can be consistently effective for the extraction of all types of biomass. Although predictions can be made based on DES characteristics, such as polarity, viscosity, and other physicochemical properties, as well as on the nature of the target compounds, extraction still requires optimization. This is due to the structural diversity of different biomass types and the complexity of their component mixtures.
When these issues are addressed, DESs can be powerful tools for processing algal and cyanobacterial biomass. Algae and cyanobacteria are compelling feedstocks for sustainable production of foods and bioactive compounds. They reach high productivity, do not compete for arable land, can grow in seawater or wastewater, and contain abundant proteins, lipids, pigments, and other metabolites. Combined with optimized DES-based pretreatment, extraction, and stabilization, these advantages can be translated into highly efficient processes.
DESs can also help overcome a practical barrier to wider use of algal products: consumer resistance due to undesirable taste and odor. Targeted DES extraction can enrich compounds of interest while reducing compounds responsible for off flavors and odors. In this context, DES are particularly promising. They enable pretreatment and selective extraction that preserves sensitive molecules, can reduce or mask negative sensory notes, and may improve nutritional and functional properties as well as the bioavailability of bioactives. Unlike conventional solvents, some DES can remain in finished formulations, if provided safety and biodegradability are demonstrated, avoiding costly solvent removal.
The synergy between DES and algal or cyanobacterial bioprocessing can improve organoleptic properties, increase bioavailability of bioactives, and align with zero-waste biorefineries.
Within these boundaries, algae and cyanobacteria remain highly attractive resources owing to their environmental sustainability, nutritional value, and diverse bioactive properties. By carefully selecting DES for pretreatment, selective extraction, and stabilization, these biological advantages can be maximized while mitigating undesirable taste and odor. Moreover, where safety and regulatory frameworks permit, certain NADES may even be retained in the final product, thereby eliminating the need for an additional solvent-removal step.
Most studies to date have focused on European biomass, with Arthrospira, Chlorella, Nannochloropsis, and Scenedesmus most frequently investigated, underscoring both their biotechnological potential and availability. To enable comparability and scale-up, studies should consistently report processing conditions (pretreatment and extraction), adopt harmonized protocols for quantifying component concentrations and biological activities, and provide numerical data that enable cross-study calculation of recovery (e.g., extract yield in mg per g dry biomass and compound content in mg per g extract).
Key challenges, detailed in the preceding section, still limit broader deployment: high viscosity and hygroscopicity, analytical incompatibilities, composition-dependent cytotoxicity and uneven regulatory acceptance, and the need for rigorous sustainability assessment. Safety evaluation and regulatory alignment should begin early, while claims of “greenness” must be supported by full life-cycle assessment and techno-economic analysis that account for energy use, emissions, and potential toxicity. Emerging LCA evidence shows that DES sustainability is formulation-dependent, with some systems exhibiting higher environmental burdens than conventional solvents, underscoring the need for a case-by-case assessment.
Future research should focus on optimizing DES systems for specific algal and cyanobacterial strains and target fractions, scaling to industrial throughputs, and integrating them with other technologies for assisted extraction. Widespread adoption will require scalable processes, clear regulatory standards, and robust ecological and economic evidence. Despite current hurdles, DES integrated with algal biotechnology are well positioned for impact in high-value markets such as nutraceuticals, pharmaceuticals, and cosmetics. With targeted research, cross-disciplinary collaboration, and realistic sustainability assessments, DES and microalgae can move from promise to practice.
| AcA | Acetic acid |
| ATPS | Aqueous two-phase systems |
| Bet | Betaine |
| BDO | 1,4-Butanediol |
| ChCl | Choline chloride |
| CA | Citric acid |
| DcA | Decanoic acid |
| DES | Deep eutectic systems |
| DoA | Dodecanoic acid |
| EG | Ethylene glycol |
| Fen | Fenchyl alcohol |
| F | Fructose |
| Ger | Geraniol |
| Glu | Glucose |
| Gly | Glycerol |
| HxA | Hexanoic acid |
| Im | Imidazole |
| LcA | Lactic acid |
| LuA | Lauric acid |
| LevA | Levulinic acid |
| MA | Malic acid |
| MAE | Microwave-assissted extraction |
| Men | Menthol |
| NADES | Natural deep eutectic solvents |
| NoA | Nonanoic acid |
| OcA | Octanoic acid |
| OD | 1,2-Octanediol |
| OleA | Oleic acid |
| PEG | Polyethylene glycol |
| PLE | Pressurized liquid extraction |
| Pro | Proline |
| PD | 1,2-Propanediol |
| PDO | 1,3-Propanediol |
| PEF | Pulsed electric field |
| AcNa | Sodium acetate |
| TMAC | Tetramethylammonium chloride |
| Thy | Thymol |
| U | Urea |
| UAE | Ultrasound-assisted extraction |
| W | Water |
| Xyl | Xylitol |
| This journal is © The Royal Society of Chemistry 2026 |