Open Access Article
Doaa R. Ramadan
ab,
Manar Ahmed Fouad
ab,
Francesco Ferretti
a,
Artur Brotons Rufesc,
Piero Macchi
d,
Lorenzo Sorace
e,
Martí Gimferrer
f,
Chiara Costabile
*c and
Fabio Ragaini
*a
aDipartimento di Chimica, Università di Milano, V. C. Golgi 19, 20133 Milano, Italy. E-mail: fabio.ragaini@unimi.it
bChemistry Department, Faculty of Science, Alexandria University, P.O. Box 426, Alexandria 21321, Egypt
cDipartimento di Chimica e Biologia “A. Zambelli”, Università di Salerno, V. Giovanni Paolo II, 84084 Fisciano, SA, Italy. E-mail: ccostabile@unisa.it
dDipartimento di Chimica, Materiali e Ingegneria Chimica, Politecnico di Milano, V. Bassini 6b, 20133 Milano, Italy
eDipartimento di Chimica “Ugo Schiff” & Udr INSTM Università di Firenze Via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
fInstitut für Physikalische Chemie, Georg-August Universität, Göttingen, Tammanstr. 6, Göttingen 37077, Germany
First published on 26th May 2026
Attempts to synthesize a phenanthroline palladium(0) complex with an η2-coordinated nitrosoarene starting from a palladium(II) precursor and the corresponding aryl hydroxylamine afforded instead apparent palladium(I) metallacyclic complexes that, on a closer inspection, were proven to be Pd(II) complexes with a new kind of radical-anionic nitrosoarene ligand.
:
ethanol = 3
:
2), hydroxylamines could be selectively obtained with yields of up to 90%.
When Pd(Phen)(OAc)2, dissolved in MeCN, was treated with an equimolar amount of p-cyanophenyl hydroxylamine at r.t., the solution gradually turned from yellow to dark green. After one hour, stirring was interrupted and diethyl ether was layered on the MeCN solution, resulting in the formation of single crystals of a new compound (2a) and of unreacted Pd(Phen)(OAc)2. Repeating the reaction in the presence of Et3N did not change its outcome, but the reaction could be pushed to completion by employing a threefold excess of hydroxylamine.
Single crystal X-ray diffraction showed that 2a is a mononuclear neutral complex containing a phenyl-o-nitrosophenylamide ligand. The latter results from the N–C coupling of two arylhydroxylamine moieties, one of which is coordinated as an amido group and the other as an η1-ArNO moiety (Scheme 1a and Fig. 1). η1-Nitrosoarenes are generally considered to coordinate as neutral ligands.9 Assuming that the amido group acts as an anionic ligand, this would imply that 2a is a very rare case of a monomeric palladium(I) complex.10 The coordination geometry around the metal ion is distorted square planar, which is typical of Pd(II) complexes, but is also compatible with a tetracoordinate Pd(I) complex.11,12 Since the complex is neutral, an odd electron count results and it has to be paramagnetic, either because palladium is in a +1 oxidation state or because of the formation of a radical-anionic nitroso ligand in conjunction with a +2 oxidation state of the palladium.
Interestingly, only three complexes, related to each other, have been reported in the literature containing a ligand analogous to that present in 2a.13,14 A structural characterization is available for only one of them, featuring no substituent on the aryl rings. It is a dimeric Pd complex, [(κ2N,N-2-PhN-C6H4NO)Pd]2(μ2-OAc)2,14 with two bridging acetate ligands, for which the standard +2 oxidation state could be inferred, in agreement with its diamagnetic nature.
The N–O distance in the dimeric palladium complex mentioned above is 1.24(1) Å, comparable with the corresponding distance in the independently synthesized free ligand, 1.259(2) Å,15 confirming its double bond character. The N–O bond length in 2a is somewhat longer, 1.292(4) Å, still quite shorter than that in the only structurally characterized palladium η2-ArNO complexes, 1.334–1.354 Å depending on the substituents on the aryl ring, and for which a Pd(II) with a di-anionic nitrosoarene ligand electronic configuration has been proposed.4,5 However, it is almost coincident with that reported for trans-Pd(CNArDipp2)2(η1-PhNO)2, 1.291(2) Å,16 for which a Pd(II) configuration has been proven, with two radical-anionic nitrosobenzene ligands and in which a N–O bond order of 1.5 could be assigned.4,16 The radical chemistry of nitrosoarenes, either metal-mediated or not, has important synthetic implications,17 but only a handful of complexes with a radical-anionic ArNO ligand have been structurally characterized.4,5,18–20
To ascertain the true nature of 2a, a Pd(I) complex or a Pd(II) complex with a radical-anionic nitroso ligand, and to gain more insight into the electronic distribution, spectroscopic characterization and theoretical calculations were carried out.
The Continuous Wave Electron Paramagnetic Resonance (cw-EPR) spectra at the X-band (v ≈ 9.4 GHz) collected both on solution and polycrystalline powder samples of 2a at cryogenic and room temperature unequivocally indicate that the spin density of 2a is located on the organic moiety. Indeed, the solid state spectrum (Fig. S5) is nicely reproduced21 by assuming a spin S = 1/2 with gxy = 2.000(1) and gz = 2.019(2), which is consistent with values expected for a nitroso radical.22 Interestingly, while the solid-state spectrum shows clear evidence of a half field transition (inset of Fig. S5), this is absent in the frozen solution spectrum (Fig. 2, upper panel), indicating that intermolecular interactions are active in the solid state but not in the solvent. Inspection of the crystal packing suggests that these may arise following π-stacking interactions between pairs of neighbouring molecules lying on parallel planes.
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Fig. 2 Experimental (red lines) X-band EPR spectra of 2a dissolved in CH2Cl2 : toluene, 1 : 1 (ca. 1 mM), and best simulations obtained using parameters reported in Table 1 (black line). Upper panel: spectrum measured at 20 K. ν = 9.356 GHz, power = 2.696 μW, and modulation amplitude: 0.15 mT. Lower panel: spectrum measured at room temperature and reported as a second derivative of the absorption ν = 9.376 GHz, power: 6.779 mW, and modulation amplitude: 0.01 mT. | ||
The frozen solution spectrum could be nicely reproduced21 by assuming completely rhombic g and a hyperfine coupling tensor to 14N (I = 1) (Fig. 2, upper panel). Finally, the simulation of the second derivative of the fluid solution spectrum (Fig. 2, lower panel) provided the isotropic hyperfine coupling parameters to the nitroso 14N (I = 1), a single 1H (I = 1/2) which we attribute to the ortho proton (vide infra) and to 105Pd (I = 5/2, n. ab. = 22%). The obtained values (see Table 1) for isotropic and anisotropic hyperfine coupling, which are consistent with expectations for a nitrosoarene anion radical,5,23,24 allowed us to calculate a spin density on 14N of about 33% (see the SI for details of the calculations), whereas the very small value of the coupling to 105Pd confirms the coordination of the radical in solution and indicates a very small spin density on the metal ion.
| Powder | Frozen solution | Fluid solution | DFT | |
|---|---|---|---|---|
| gx | 2.002 | 2.000 | 1.988 | |
| gy | 2.002 | 2.007 | 1.996 | |
| gz | 2.019 | 2.019 | 2.015 | |
| giso | — | — | 2.0088 | 2.000 |
| |Ax(14N)|/MHz | — | 62.2 | 63.2 | |
| |Ay(14N)|/MHz | — | 6.80 | 9.4 | |
| |Az(14N)|/MHz | — | 11.5 | 7.3 | |
| |Aiso (14N)|/MHz | — | — | 26.7 | 26.6 |
| |Aiso (1H)|/MHz | — | 8.75 | 13.9 | |
| |Aiso (105Pd)|/MHz | — | 1.3 | 3.7 |
Using the X-ray structure of 2a as a starting guess, DFT calculations were performed to optimize the geometry at the uM06-D3/def2-TZVPP//uBP86/def2-SVP level of theory (see the SI for computational details and method validation).
The DFT calculations of the EPR parameters were run with ORCA, according to the computational details reported in the SI. The computed g-tensor exhibits only moderate anisotropy, with principal values gx = 1.988, gy = 1.996, and gz = 2.015 (giso = 2.000) remaining close to the free-electron values. Although computed g values are slightly underestimated with respect to the experimental ones, the deviation remains within the typical accuracy of DFT for g tensors and reproduces the overall anisotropy and ordering of the tensor components. The DFT calculated parameters for the hyperfine coupling to Pd, N (of the nitroso group, namely N6 of Fig. 4) and H ortho to the nitroso group (namely H15 of Fig. 4) are in good agreement with experimental ones.
Molecular orbital (MO) analysis reveals that the unpaired electron corresponding to the highest occupied MO (HOMO) is mostly located on the nitroso-containing metallacycle ligand, with a very small contribution from the metal centre (Fig. S8). Moreover, the three lower energy molecular orbitals result from the overlap between the d-type Pd orbitals and the σ- and π-system of the phenyl-o-nitrosophenylamide ligand (Table S3). The spin density distribution (see Fig. 3) indicates that most of the excess spin is located on the nitroso ligand and especially on the N–O group itself with only minor spin density around the metal. This suggests a nitroso-centered radical, consistent with a formal Pd(II) center, although a strict assignment of these orbitals to either the metal or ligand is complicated by their delocalized character.
A plausible solution is the use of computational tools specifically devised to assign formal oxidation states or quantify the local spin of each atom/fragment in the molecule, such as the Effective Oxidation State (EOS) and Local Spin Analysis (LSA), which proved their usefulness in the characterization of challenging organometallic compounds.25–27 These methods, implemented in the APOST-3D software,28 require defining the atom in a molecule (AIM) and manually selecting which atoms constitute a given fragment. In this work, we used the Topological Fuzzy Voronoi Cells (TFVC) AIM definition29,30 and selected the three chemically intuitive fragments shown in Fig. 4. The TFVC charges of each fragment are shown in Table S4. The palladium centre presents an atomic charge very close to +1 (1.107), being the negative counterpart mostly located in fragment 3 (−1.208), whereas fragment 2 was found to be almost perfectly neutral (0.097). This describes a coordinated complex with a cationic metal centre and an anionic ligand, as expected. Moreover, N6 has a charge of −0.473, which fits with a σ-donation to an electron-deficient metal centre that struggles to back-donate, as a Pd(II) (Table S5). The vicinal N4 has a considerably greater negative charge of ∼−1.3, which is expected for an amide nitrogen. A similar situation occurs in fragment 2, where the two nitrogen atoms have even more negative charges of ∼−1.4. These large negative values do not indicate an actual anionic character; rather, a consequence of a real-space partition of an electronegative atom in a highly delocalized system as a phenanthroline. Conversely, for the nitroso nitrogen, the charge decreases due to the delocalization within the N6 and O2 bond. So far, it has been possible to describe the overall electron density distribution among fragments, but no indication of unpaired electron density distribution can be found yet.
To clarify or ensure the formal electronic picture of the system, we used a tool especially designed for that purpose: the effective oxidation state (EOS). This method treats the electrons in the same orbital with opposite spin (α and β) independently, making it possible to assign them separately to each atom of a molecule. The EOS analysis is based on effective fragment orbitals (EFOs) and their occupation numbers, calculated for all fragments defined in the system. This is another methodology designed to account for oxidation states by treating the electrons individually. These are assigned to those spin-resolved EFOs, which have been previously ordered by their occupations. This procedure yields an effective electronic configuration for each atom or ligand in the molecule, which directly determines its oxidation state. A reliability index (R%) is used to assess how close the real electronic structure of the complex is to the formal one (based on the ionic assignment of electrons), calculating the difference between the occupation number of the last occupied (LO) and the first unoccupied (FU) EFOs. When this gap is very small, the localization of the electron in a single orbital is dubious. The most problematic scenario arises when two or more frontier EFOs located on different fragments share the same occupation number. In such cases, EOS analysis produces two equally plausible oxidation state distributions, with R = 50%.
The first relevant possible observation concerns the number of α and β occupied EFOs reported in the output, where fragment 3 shows an odd number of orbitals, which contrasts with the even number of elements for fragments 1 and 2 (see Tables S6 and S7). This already suggests that the unpaired electron does not belong to fragment 1 (i.e. Pd). When looking at its valence d-orbitals, we see four α and β pairs with high occupations (Fig. S10). Then, with a much lower value, one finds the empty 4d|x2−y2|, which is typical of a Pd(II) electronic configuration and a square planar coordination. The 5s orbital displays an even lower occupation (0.128–0.129).
In all three fragments, there are several orbitals with very low occupations, low enough not to compete in the electronic assignation (formally virtual orbitals, with occupations presented in Tables S6–S8). Overall, the R(%) value is 68.95, which is somewhat low but larger than the threshold for the electron being considered clear-cut (>60%).31
It is important to note that the occupation ordering of the EFOs is not in a 1
:
1 correspondence with the canonical orbitals, which are variationally ordered with respect to the energy. So, the last occupied EFO (LO), presented in Fig. 5 left, does not correspond to the unpaired electron, having also a complementary β EFO with a matching isosurface (occupation in parentheses). To find the unpaired electron, we have to search for an orbital without a complement within the occupied EFOs. This is a consequence of the EFOs being ordered by decreasing occupation. The α EFO of significant occupation that lacks an occupied complement is displayed in Fig. 5 right. Note how the shape of the orbital is similar to the last occupied canonical MO shown in Fig. S9, but much more localized in the nitroso group and binding nitrogen.
Overall, the EOS analysis assigns a formal oxidation state of −2 to the nitrosamido ligand (fragment 3), and +2 to the palladium centre (fragment 1), with the unpaired electron (radical) being located on the nitroso ligand. This is in agreement with the experimental EPR findings.
Further characterization of the unpaired electron in 2a can be realized by means of the local spin analysis and the number of the effectively unpaired electrons.32 The results are presented in Table S9, pinpointing that the unpaired electron is mostly on fragment 3 (91.4%), with only a 4% located at the Pd centre. These values harshly contradict a Pd(I) situation and are consistent with EPR results. Evaluating the contribution per atom, one can see that more than half of the unpaired density comes from the nitroso functional group with 29.4% on N and 27.9% on O, respectively (Table S10). Note that the calculated 29.4% unpaired density on nitrogen is in excellent agreement with the ca. 33% value obtained by the simulation of the fluid solution EPR spectrum (vide supra). Furthermore, the impact of the cyanide substituents was evaluated on the unsubstituted analogue. Although some of the unpaired density moves towards the phenanthroline side, most of it remains unchanged.
Finally, the 〈S2〉 value of the wavefunction at the current level of theory is 0.781 (0.75 ideal value for a doublet). Its decomposition by means of local spin analysis, with 〈S2〉A being the A-th fragment contribution to the total 〈S2〉, allows unveiling the location of the unpaired electron. In particular, an ideal fragment with one unpaired electron (doublet) leads to 〈S2〉A = 0.75, while a fragment with all electrons paired (singlet) shows 〈S2〉A = 0.00. We present the results in Table S11, observing (again) that the spin is located on the nitroso ligand (〈S2〉3 = 0.733) which contradicts again a Pd(I) situation. The off-diagonal terms (spin couplings) are quite small, indicating that the electron is mostly confined within the fragment.
Altogether, experimental evidence and quantum chemical simulations indicate that the system is best described as a Pd(II) complex featuring a ligand-centered radical delocalized over the nitroso metallacycle, rather than a true Pd(I) species.
Complex 2a is not a unique compound. The same reaction (threefold excess of hydroxylamine) was also performed with differently substituted substrates. In the cases of 2-PhC6H4NHOH (1e) and 2-MeC6H4NHOH (1f), the product precipitated out of the reaction mixture, as observed also for 2a, and an analogous structure can be proposed based on the detection of the molecular mass peaks of 2e and 2f in their ESI spectrum. When no substituent or fluoro or chloro substituents were present at the para position, only apparently incomplete reactions occurred, without any precipitate formation. However, when 2,6-Me2C6H3NHOH (1b) was employed, where both ortho positions were blocked and the coupling observed in 2a could not occur, no reaction was observed (Scheme 1b). Full characterization is in progress for a series of metallacycles of type 2 together with an investigation of the mechanism by which they are formed.
In the experiment where triethylamine was used to neutralize the acetic acid formed during the reaction, p-NCC6H4NHOH (0.10 mmol) was employed. Et3N (0.10 mmol) was added to the reaction mixture immediately after the addition of the N-arylhydroxylamine derivative. In a separate trial, the order of addition was reversed, and the Pd(II) solution was added dropwise to the N-arylhydroxylamine solution; however, no difference in the outcome of the reaction was observed.
Although precipitation of the complex began approximately 2 h after the start of the reaction, the reaction mixture was allowed to stir for 48 h to ensure complete complex formation and to avoid the presence of residual unreacted Pd(II) in the final product. The resulting complex was collected by filtration and dried under reduced pressure.
2a: The isolated solid contains one cocrystallised molecule of water. 153.3 mg, 57.0% yield. Anal. calcd for C26H17N6O2Pd (2a·H2O): C, 56.59; H, 3.11; N, 15.23. Found: C, 56.49; H, 3.00; N, 14.95. Additional material was obtained by adding diethyl ether to the reaction solution after filtration, but it was not pure.
An initial attempt to isolate the crystals involved careful layering of diethyl ether directly onto the crude reaction mixture. Under these conditions, both green crystals of the desired complex and yellow crystals of Pd(Phen)(OAc)2 were obtained.
37 using Gauss–Newton minimisation. All non-hydrogen atoms were refined anisotropically. Hydrogen atom positions were calculated geometrically and refined using the riding model.
The structure contains large voids, likely occupied by the crystallization solvent, which is however not ordered and therefore invisible from the diffraction experiment. The asymmetric unit void has a volume of 107 Å3 associated with ca. 23 electrons from the calculated Fourier difference map. This would correspond approximately to one molecule of CH3CN in each asymmetric unit that contains a molecule of 2a, giving therefore the final formula of C26H15N6OPd·C2H3N. For the final model refinement, the solvent mask option in Olex2 was applied, thus removing the contribution of the solvent from the structure factors. The presence of anions in the voids (that would imply a cationic complex) can be safely excluded because, if present, they would be more strongly bound to the complex. Moreover, the observed magnetism of 2a clearly implies a neutral complex.
, where β is the Bohr magneton. Solution spectra were simulated assuming an isotropic spin Hamiltonian including hyperfine coupling to one 14N, one 1H, and 105Pd (the latter for a fraction of 22%, according to its natural abundance):CCDC 2521055 (2a) contains the supplementary crystallographic data for this paper.49
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