Open Access Article
Xiaoning
Li
a,
James
Boyt
b,
Min
Cai
b,
Steven
Sloope
b,
Luke T.
Lackovic
b,
Mark D.
Smith
b and
John J.
Lavigne
*b
aDepartment of Chemistry, Georgia Southern University, Statesboro, GA 30460, USA. E-mail: xiaoningli@georgiasouthern.edu
bDepartment of Chemistry & Biochemistry, University of South Carolina, Columbia, SC 29208, USA. E-mail: Lavigne@sc.edu; Fax: +01 803 777 9521; Tel: +01 803 777 2295
First published on 2nd February 2026
Conjugated thiophene-based diboronate esters, 1–4, were synthesized to investigate how substituents on catechol alter the Lewis acidity and accessibility to boron, and influence binding interactions with low molecular weight Lewis basic amines. Crystallographic analysis indicated that both boron centres bind analyte and that Lewis base coordination induces deplanarization of the conjugated system. Spectroscopic studies demonstrate that amine binding disrupts conjugation, producing distinct and reproducible optical responses that depend on analyte basicity and structure, with association constants in organic solvent ranging from 103 to 106 M−1. Quantitative binding analyses indicate strong negative cooperativity between the two boron sites. These results establish design principles for cross-reactive optical sensor arrays capable of differentiating volatile amines relevant to environmental monitoring, food quality assessment, and biomedical diagnostics.
These studies address a need to understand how these small organic molecules can bind to analytes of biological and environmental relevance. Volatile amines are common pollutants from agriculture and the chemical and pharmaceutical industries due to extensive use in fertilizers, colorants and medicines,10,11 as well as being indicators of quality in foods.12–15 In certain diseases, volatile amines also serve as biomarkers for medical diagnoses.16 Thus, a readily synthesized optical sensor for the detection of volatile amines could be utilized for pollution control, food quality evaluation and medical diagnoses. State-of-the-art detection methods for volatile amines include electrochemical analysis,17 as well as gas18 and liquid chromatographic methods.19,20 However, these detection methods tend to be time-consuming and require high-cost instruments and highly trained operators. Consequently, recent efforts have addressed the desire for rapid, straightforward and low-cost detection methods.
Optical sensing materials for volatile amine detection based on electrostatics,21,22 hydrogen bonding23,24 and Lewis acid–base interactions25–27 have been developed, including conjugated organoboranes.28–31 As an alternative to organoboranes, boronic esters display enhanced planarity through the borole linkage and reduced steric interactions with potential guests,7,32 and have been used to bind ions.33–35 Furthermore, this B–N bonding interaction has been useful in the development of supramolecular materials with unique structural, electronic, and “self-healing” properties.36
The investigations presented herein use a series of diboronate esters (Scheme 1) capable of differentially binding low molecular weight amines to probe the mechanism by which analyte is bound and an optical signal is generated. The electronic properties and accessibility to the analyte binding site on boron are controlled without disrupting π-conjugation by varying the substituents on the aromatic diol moiety.6
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| Fig. 1 1H NMR spectra (CDCl3) of (a) 1 (20 mM), (b) 1 (20 mM) with 2 equiv. fluoride (40 mM), and (c) a mixture of 2,5-thiophene diboronic acid (20 mM) and catechol (40 mM). | ||
A sealed quartz cuvette was charged with 2 mL of the sensor working solution and the absorbance spectrum acquired at 25 °C. An absorption scan was taken after each addition of 1 or 2 μL of the analyte working solution in an air/moisture free manner (i.e., via syringe through a septum sealed cuvette). Three replicates were produced for each titration.
The desired boronates were synthesized by condensing 2,5-thiophenediboronic acid and the appropriate aromatic diol in 65–95% yield (Scheme 1). To assess the factors affecting binding of amine analytes with compounds 1–4, electron-donating (–OMe, 3), electron-withdrawing (–CO2Et, 2) and sterically incumbered (–di-tBu, 4) substituents were incorporated on the aromatic diol component, providing diboronic esters with altered Lewis acidity and steric hindrance. Moreover, volatile amines with varying sterics and basicities/nucleophilicities were chosen to investigate the impact analyte structure has on binding and signal generation.
:
2 bis(dioxaborole) to fluoride ratio (Fig. S35).40 Moreover, no resonances were observed for starting materials upon fluoride addition (Fig. 1b vs. c) indicating the stability of the ester upon binding analyte.41 To demonstrate the reversibility of this interaction, TMS-Cl was added to the 1-F complex to successfully compete for the fluoride, regenerating free host 1 (Fig. S2). Similarly, 11B NMR of 1 showed a single broad peak centred at 29.6 ppm,42 indicative of sp2 hybridized trigonal planar boron such as that found in the ester. Upon addition of 2 equivalents of TBAF (1
:
1 B
:
F ratio) the resonance shifted upfield to 8.0 ppm suggesting a clean change in hybridization at the boron to sp3. Once TMS-Cl was added, the boron signal returned to that of unbound sp2 hybridized 1 at 29.6 ppm (Fig. S3). Analogous 19F NMR studies further support the complete coordination of this anion with boron (Fig. S4).
The solid-state structures of 1 and 1–2F, determined from single crystal XRD (Fig. 2a and b), reveal the predicted trigonal planar geometry around both boron centres in 1, with the ring dihedral angles deviating only 1–10° from planarity, implying near-ideal conjugation (Table 1). In contrast, conventional boranes exhibit dihedral angles from 30°–90° depending on the boron-substituents.43–45 The X-ray data for the 1–2F complex shows the deplanarization of the bis(dioxaborole) after formation of the boron-fluorine bonds, thus disrupting conjugation.
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| Fig. 2 Solid state structures of 1 (a) and 1–2F (b). Displacement ellipsoids at 60% probability level. Counterions and solvent omitted for clarity. | ||
| Compd | Bond length/Å | Bond angle/° | Dihedral angle |
|---|---|---|---|
| 1 | B(1)–O(1) 1.384(2) | O(1)–B(1)–O(2) 112.14(15) | (B1,O1,O2,C5–C10) – (S1,C1–C4) = 10.40(8) |
| B(1)–O(2) 1.387(2) | O(1)–B(1)–C(1) 124.83(15) | ||
| B(1)–C(1) 1.537(2) | O(2)–B(1)–C(1) 123.03(15) | ||
| B(2)–O(4) 1.386(2) | O(4)–B(2)–O(3) 112.16(14) | ||
| B(2)–O(3) 1.387(2) | O(4)–B(2)–C(4) 122.24(15) | (B2,O3,O4,C11–C16) – (S1,C1–C4) = 1.35(9) | |
| B(2)–C(4) 1.533(2) | O(3)–B(2)–C(4) 125.60(15) | ||
| 1–2F | B(1)–F(1) 1.425(3) | F(1)–B(1)–O(2) 108.78(16) | |
| B(1)–O(2) 1.492(3) | F(1)–B(1)–O(1) 107.98(16) | ||
| B(1)–O(1) 1.505(3) | O(2)–B(1)–O(1) 104.57(16) | ||
| B(1)–C(1) 1.599(3) | F(1)–B(1)–C(1) 110.01(17) | ||
| B(2)–F(2) 1.423(2) | O(2)–B(1)–C(1) 112.02(17) | ||
| B(2)–O(4) 1.496(2) | O(1)–B(1)–C(1) 113.23(16) | ||
| B(2)–O(3) 1.503(3) | F(2)–B(2)–O(4) 108.48(15) | ||
| B(2)–C(4) 1.600(3) | F(2)–B(2)–O(3) 108.46(15) | ||
| O(4)–B(2)–O(3) 104.32(15) | |||
| F(2)–B(2)–C(4) 110.47(16) | |||
| O(4)–B(2)–C(4) 112.47(15) | |||
| O(3)–B(2)–C(4) 112.36(16) | |||
While fluoride provides mechanistic insight, our objective was to bind weaker Lewis bases, e.g. amines. As a typical example we used n-butylamine (nBuNH2). The aromatic proton resonances of 1 shifted upfield upon addition of 2 equivalents of nBuNH2 (Fig. 3a and b), though not as significantly as when fluoride was added (Fig. 1b). The broad resonances depicted in Fig. 3b are due to signal averaging upon fast exchange between free and bound amine. As expected, the interaction between 1 and nBuNH2 was weaker than that between 1 and fluoride, reducing the shielding effect from the partial negative charge generated at the boron centres. Significantly, the Lewis acid–base interaction was completely reversible. Upon the addition of excess trifluoroacetic acid (TFA), to protonate the nBuNH2, the aromatic resonances shifted back to the original chemical shift of 1 (Fig. 3c). This reversibility indicated that 1 was stable both when amine was bound and under strongly acidic conditions.
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| Fig. 3 1H NMR spectra (CDCl3) of (a) 1 (20 mM); (b) 1 (20 mM) and nBuNH2 (40 mM); and (c) 1 (20 mM), nBuNH2 (40 mM) and TFA (80 mM). | ||
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| Fig. 4 Changes in the absorption spectra of 1 (35 µM in CH2Cl2) upon sequential addition of nBuNH2. Inset: binding isotherm calculated at 292 nm. | ||
Using absorption titration data, binding constants were calculated based on a 1
:
2 host to guest binding stoichiometry46 for amine guests binding to bis(dioxaborole)s 1–4 (eqn (1)). Herein, the change in absorbance is used to calculate binding constants via a nonlinear regression analysis, where b is pathlength, ε is absorptivity, and S is the total concentration of the substrate.47 (ref Connors) The inset in Fig. 4 graphically depicts the spectral changes observed upon binding of n-butyl amine to bis(dioxaborole) 1. The binding affinity for the second amine equivalent was less than that of the first (e.g.1: nBuNH2, log
Ka1 = 5.10 ± 0.12 and log
Ka2 = 3.28 ± 0.16).
![]() | (1) |
Compounds 1–4, each having boron centres of differing Lewis acidity and/or steric demands, were used to explore how these factors impact amine binding. Table 2 shows electron density maps and the positive electrostatic potential at boron for 1–4. Moreover, low molecular weight amines with contrasting basicity and steric demand were chosen to examine the impact of these factors, including: n-butylamine (nBuNH2, pKb = 3.41), isopropylamine (iPrNH2, pKb = 3.37), diisopropylamine (iPr2NH, pKb = 2.95), and N-ethyldiisopropylamine (iPr2EtN, pKb = 2.60).48,49 Compounds 1 (–H) and 2 (–CO2Et) were employed to evaluate the influence Lewis acidity has on analyte binding, with 2 being more Lewis acidic (Table 2) as a result of the electron withdrawing esters. Consequently, Fig. 5 depicts 2 consistently displaying higher binding affinity for each amine compared to 1 due to this enhanced Lewis acidity.
| Compound | Electrostatic density surfacea (−100–100 kJ mol−1) | Electrostatic potential at boronb |
|---|---|---|
| a Red represents electron rich and blue represents electron deficient areas. b Larger numbers represent higher electron deficiency at boron. | ||
| 1 (–H) |
|
77.9 kJ mol−1 |
| 2 (–CO2Et) |
|
100.9 kJ mol−1 |
| 3 (–OMe) |
|
69.0 kJ mol−1 |
| 4 (–di-tBu) |
|
69.0 kJ mol−1 |
Amine binding to 3 (–OMe) and 4 (–di-tBu) was used to assess the impact of sterics on bis(dioxaborole)s binding Lewis bases. While the Lewis acidity is the same for these compounds, based on the calculated electrostatic potential at boron (Table 2), there are significant steric interactions around the boron centres in 4, attributed to the 3-t-butyl group, that are not found in 3. As a result, 3 exhibited higher affinity towards each analyte compared to 4. Still, the exact role sterics play in diminishing binding in 4 is unclear. We postulate that the 3-t-butyl groups may either block access to the boron binding sites or introduce angle strain that reduces the change in the bond angles around the boron centers.
The sterics and basicity of the amine analytes also impact the binding affinity at boron. For example, while nBuNH2 and iPrNH2 exhibit similar basicity, the strength of the binding interactions with compounds 1–4 differs significantly due to the greater steric bulk of iPrNH2 (Fig. 5). Interestingly, boronates 1–3 displayed higher binding affinity for iPr2EtN compared to the other analytes studied, although the steric hindrance in iPr2EtN was greater. This apparent anomaly is attributed to the stronger Lewis basicity of iPr2EtN compared to the other amines. Still, these are competing factors and there is a point where basicity cannot overcome sterics. As observed for 4, the affinity for iPr2EtN is lower than that for nBuNH2, and it appears that the significance of the steric interactions, in this case, outweigh the basicity effects.
While all the bis(dioxaborole)s studied bound each amine cross-reactively, each exhibited different binding patterns, providing a unique array of responses from 1–4 for each analyte. Fig. 6 shows the relative change in absorbance for 1–4 in response to the addition of analyte. Compound 2 consistently had the largest response to each analyte because it is the strongest Lewis acid. As a result, the response from 2 had minimal differentiation-ability between analytes (max fold-change = 1.3), and thus lacked selectivity based on amine basicity and sterics.
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| Fig. 6 Relative percent change in absorbance for 1–4 upon the addition of each amine (2 equiv.) creating distinct patterns. | ||
In contrast, the crowded and weak Lewis acid 4, showed a small response to the bulky amines, yet exhibited a relatively strong response to the compact nBuNH2, thereby displaying clear selectivity (max fold-change = 22). Compounds 1 and 3 were cross-reactive towards binding these amines. Both exhibited similar affinity trends, with the responses determined by the electronic and steric properties of the amines.
Modelling of the electrostatic positive potentials at the unbound boron centre in each sensor-analyte complex (Table 3), suggests that the Lewis acidity and accessibility of the second sp2 boron centre in each complex is significantly influenced by the first step binding. The second step binding constants, Ka2 (Table S2) were also obtained from absorption titration studies, and are all smaller than the Ka1 as expected due to electronics and binding statistics.
| Compound | Electrostatic density surfacea (−100–100 kJ mol−1) | Electrostatic potential at boronb |
|---|---|---|
| a Red represents electron rich and blue represents electron deficient areas. b Larger numbers represent higher electron deficiency at boron. | ||
| MeNH2-1 (–H) |
|
58.0 kJ mol−1 |
| MeNH2-2 (–CO2Et) |
|
79.2 kJ mol−1 |
| MeNH2-3 (–OMe) |
|
27.8 kJ mol−1 |
| MeNH2-4 (–di-tBu) |
|
54.6 kJ mol−1 |
The interaction parameter, α (eqn (2)), is used to describe the interactions between ligands bound to multiple sites. In the case where two binding sites on the molecule are identical and exhibit no cooperativity, Ka1 = 4Ka2 and α = 1. In cases where binding of the ligand to one site affects the potential to bind to the other site, α > 1 would indicate positive cooperativity, while α < 1 will indicate negative cooperativity.
![]() | (2) |
For the interaction between 1 and nBuNH2, the interaction parameter, α, was found to be 0.060, indicating strong negative cooperativity. Comparatively, the stronger acids 2 and 3, gave values of α = 0.053 and 0.039, respectively indicating very strong negative cooperativity due to the deactivation of the electron withdrawing groups with the addition of the nucleophile. Finally, compound 4 gave a value of α = 0.43, indicating weak negative cooperativity due to electron donation from the t-butyl groups and steric interactions impacting binding. Similar trends in interaction parameters were observed upon binding to the other amines (Table S3). These trends display effective communication from one boron site to the other through the thiophene linker, with this effect being more influential in molecules that contain an electron withdrawing group.
Crystallographic data for 1 and 1-2F have been deposited at the CCDC under accession numbers 1010916 and 1010917, respectively.50a,b
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1.93.| This journal is © The Royal Society of Chemistry 2026 |