Open Access Article
Andrew L. D. M.
Laluk
ab,
Dennis A.
Buschmann
bd,
Shinjiro
Takano
bd,
Angus I.
Sullivan
ab,
Parimah
Aminfar
ab,
Kevin
Stamplecoskie
*ab,
Tatsuya
Tsukuda
*bd and
Cathleen M.
Crudden
*abc
aDepartment of Chemistry, Queen's University, Chernoff Hall, Kingston, Ontario K7L 3N6, Canada. E-mail: cruddenc@queensu.ca; kevin.stamplecoskie@queensu.ca
bCarbon to Metal Coating Institute, Queen's University, Kingston, Ontario K7L 3N6, Canada
cInstitute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Chikusa, Nagoya 464-8602, Japan
dDepartment of Chemistry, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan. E-mail: tsukuda@chem.s.u-tokyo.ac.jp
First published on 31st July 2025
There is significant potential use for gold nanoclusters in biomedicine owing to their favorable biological and optical properties. To access this potential, there is a need for methods to alter the ligand scaffold of gold nanoclusters to tune their biological properties. Surface modifications to the ligands must occur with molecular precision to generate monodisperse products for the accurate determination of structure activity relationships and eventual translation to clinical practice. Herein, we describe methods for molecularly precise surface modifications to Au13 nanoclusters via amide couplings to –COOH functionalities and their stability to conditions necessary for the removal of protecting groups used in amide coupling chemistry. These clusters were found to be highly stable to basic conditions for the removal of base-labile -Fmoc and -OMe groups but less stable to acidic conditions for the removal of acid-labile -Boc and -OtBu groups. The ligand shell and Au13 core of such clusters were found to be preserved following modifications to the ligand shell allowing the solubility and biological properties of the cluster to be altered independently of their optical properties. The nature of the protecting ligand was found be instrumental for cluster stability to enable the use of the harsh conditions necessary to yield monodisperse products.
The ligands employed to support AuNCs are critical for their stability, and provide opportunities to control structure, tune physical properties and append biologically relevant ligands.3,7–9 Thiolates,8,10 alkynyls,11,12 phosphines13 and more recently, N-heterocyclic carbenes (NHCs)14,15 are the main ligands employed to stabilize AuNCs. L-type ligands such as phosphines and NHCs typically cause a reduction of the HOMO–LUMO gap of the nanocluster, shifting emission wavelengths to the near infrared region where tissue penetration is greater.16 However, photoluminescence quantum yields (PLQYs) of known NHC-stabilized clusters are reported to be considerably higher, reaching 62% for superatom-type clusters and 30% for coordination clusters.16,17
Despite a growing abundance of NHC-protected AuNCs with various gold core sizes and ligand structures,8,10,18–22 there are few reports of functionalization of the ligand shell to introduce tumor-targeting agents or to optimize physical properties.6,23,24 Post-synthetic functionalization of AuNCs has been achieved,25,26 but is often complicated by incomplete reactions on the ligand layers27–32 and instability under reaction conditions can lead to decomposition, aggregation, or structural rearrangement of the gold core under conditions required for their functionalization.33–35 Most importantly, there is a lack of knowledge of the effect of ligand structure on the efficiency of these bioconjugation reactions.
Considering these issues and our interest in the use of NHC-stabilized AuNCs for biological applications, we set out to develop conditions for complete bioconjugation reactions at the ligand without disrupting the gold core. Herein we describe the use of amide coupling reactions for bioconjugation on NHC-stabilized AuNCs (Fig. 1C). The stability of the ligand shell is critical to enable reaction of all 10 NHC-appended carboxylic acids without decomposition of the AuNC. We also describe the key structural features of the NHC ligands that enable them to survive these sometimes harsh conditions (Fig. 1A and B) and explore the effect of post-synthetic modifications to the NHC ligands on the photophysical properties of the AuNCs.
After the desired ligands were prepared, conversion into their respective molecular gold complexes (NHCCO2Et)AuX (1a–b) and (NHCCO2Et)2(Au2X2) (1c–d) was achieved by stirring in acetone at 60 °C in the presence of K2CO3 and (CH3)2SAuCl. Reduction of 1a–d with NaBH4, followed by treatment with HCl or HBr,36 and purification by column chromatography gave the desired ethyl ester-functionalized Au13 nanoclusters 2a–d (Fig. 1A).
During this procedure, the monodentate imidazolylidene NHC-supported cluster [Au13(ImNHCCO2Et)9Cl3]Cl2 (2a) stood out as the least stable, since a notable degree of decomposition was observed during chromatographic purification. However, the large difference in solubility between the cluster and molecular NHC–Au–X complexes enabled purification by repeated washing with MeOH. Cluster 2b is identical except for the presence of benzannulation on the NHC, this small change provided higher stability to the cluster, with only small amounts of decomposition observed during chromatography. Previous crystallographic studies have shown that CH–π and π–π interactions exist between the benzyl wingtips and the benzannulated NHC backbone of similar monotopic NHC protected clusters.37 These stabilizing interactions afforded by benzannulation of the NHC ligands in 2b likely contribute to the increased stability of benzannulated clusters relative to simple imidazolylidene derivatives (2a). This illustrates that non-covalent interactions need to be taken into account along with the strength of the NHC–Au bond. Since the introduction of benzannulation on the NHC ligand affords increased stability to the cluster, ditopic ligands with benzannulated NHCs were prepared next.
Clusters prepared from ditopic NHC (diNHC) ligands (2c–d) with the general formula [Au13(BzimNHCCO2Et)5X2]X3 did show significantly greater stability compared with 2a–b, with no signs of decomposition during chromatography. The stability of the diNHC ligated clusters is similar to those previously reported, indicating that cluster stability is largely unchanged by introducing ester substituents at the para position of the benzyl wingtip groups.37,38
Single-crystals of the monotopic clusters [Au13(ImNHCCO2Et)9Cl3][PF6]2 (2a[PF6]2, space group P21/n) were obtained by layering dichloromethane/methanol solutions with n-hexane (Fig. 1D). The bond lengths between the surface gold atoms (Aus) and the central gold atom (Auc) were in the range of 2.7336(10)–2.7859(11) Å with an average bond length of 2.7585 Å. The known cluster lacking the CO2Et group, [Au13(BzimBn)9Cl3][PF6]2 ((Z), space group P
),37 was previously characterized by single-crystal X-ray crystallography, with slightly longer Aus–Auc bond lengths (2.7308(8)–2.8049(8) Å, avg. = 2.7681 Å). These marginal differences in Au–Au bond lengths may be attributed to the increased steric hindrance of the ligand system in 2a due to the additional COOEt groups resulting in different crystal packing (Table 1).
| Cluster | Average bond length (Å) | |
|---|---|---|
| Aus–Auc | Aus–Aus | |
| 2a | 2.760 ± 0.015 | 2.902 ± 0.038 |
| Z | 2.768 ± 0.023 | 2.911 ± 0.037 |
:
1 EtOH/H2O mixture at ambient temperature for 4 h, consistent with the lower stability of this cluster observed during purification. In contrast, saponification, although incomplete, was observed for the monodentate benzimidazole variant (2b) and the propyl linked ditopic cluster (2c) under the same conditions with gradual decomposition. ESI-MS revealed that while the Au13 core remained intact, the reaction solution featured a mixture of Au13 clusters with differently saponified ligand shells (Fig. S18 and S19). Due to the similar surface chemistry and size of the clusters in the crude product, such mixtures could not be separated to generate a single product, though a separation of the cluster species from smaller Au–NHC complexes was accomplished via ultrafiltration using a 3 kDa molecular weight cutoff filter by spinning at 3500 rpm for 60 minutes at a flux of 20 mL per hour and repeating this process until the filtrate was colourless. Further attempts to achieve complete saponification of clusters 2a–c by increasing the temperature of the solution, reaction time, or equivalents of base resulted in the decomposition of the Au13 core prior to complete saponification of the ligands.
Next, we turned to cluster 2d as one of the most stable clusters in this series. Mild saponification conditions at room temperature with few equivalents of base resulted in incomplete saponification of 2d. However, cluster 2d could be subjected to harshly basic conditions at high temperatures without decomposition as shown by UV-vis absorption spectra taken before and after heating at 90 °C for 4 days in 1
:
1 EtOH
:
H2O with 30 eq. KOH followed by 3 days in H2O with 30 eq. KOH indicate minimal decomposition of the Au13 core (Fig. 1B). The higher stability of cluster 2d under harshly basic conditions allowed it to survive conditions necessary to induce complete saponification of all 10 surface ester functionalities (Fig. 2D). Reaction times were reduced from 1 week to 2 hours using DMSO instead of EtOH as a co-solvent to solubilize 2d in aqueous solutions (Fig. 2A and D). A small amount of decomposition was observed, generating some NHC–Au-X complex impurities, but these were easily removed via size exclusion chromatography (see SI for details) to generate 3d in high purity and yields (84%). 1H NMR spectra of 3d showed the successful removal of the characteristic signals centered at 4.1 ppm (–OCH2) and 1.3 ppm (–CH3) of the ethyl ester present in the 1H NMR of 2d, and the presence of a broad singlet at 12.6 ppm associated with the new –CO2H functionality (Fig. 2B and C). Cluster 3d was observed to be soluble in aqueous solutions at pH > 4, at which the carboxylic acids are deprotonated.
The high thermal stability of the diNHC-protected cluster 2d compared to monotopic NHC-protected clusters 2a and 2b was expected based on previous reports of related NHC-protected Au13 clusters.37,38 However, a comparison of the propyl-linked diNHC cluster (2c) with the xylyl linked diNHC cluster (2d) reveals that the chelate effect is not the only factor contributing to the extremely high thermal stability of 2d. Previous crystallographic evidence has shown there are CH–π and π–π interactions between the xylyl linker and the benzannulated NHC backbone of similar ditopic NHC-protected Au13 clusters.38 These stabilizing interactions between the aromatic xylyl linker present in 2d contribute to the higher stability than 2c, preserving the Au13 core under the harsh saponification conditions necessary to achieve complete removal of the ethyl esters on the ligand shell. Thus, the successful saponification of cluster 2d can be attributed to its high thermal stability under basic conditions rather than differences in reactivity of the ethyl ester groups between the other ester functionalized clusters 2a–c.
To confirm that the ligand scaffold of 2d had been preserved following saponification and amide coupling, 1H, 13C{1H}, 1H–1H homonuclear correlation spectroscopy (COSY), and 1H–13C heteronuclear single quantum coherence (HSQC) experiments were conducted. The 1H NMR spectra of 2d, 3d, and 4d showed 8 unique CH2 signals, identified by cross peaks with benzylic carbons in 1H–13C HSQC experiments (Fig. S38, S40, and S42). 1H–1H COSY experiments of these compounds revealed 4 pairs of CH2 doublet signals which coupled to each other (Fig. S38, S40, and S42). These experiments show that the 4 benzylic CH2 units on xylyl linked clusters are rigidly locked in unique chemical environments preventing free rotation of the hydrogen atoms and giving rise to 8 diastereotopic CH2 doublet signals. 13C{1H} NMR spectra of 2d, 3d, and 4d revealed that there are only two unique NCN chemical environments (Fig. S38, S40, and S42). These observations are consistent in the NMR spectra of 2a, 3d, and 4d, suggesting each cluster has C5 rotational symmetry with no horizontal plane of symmetry giving rise to a single ligand environment, which is preserved across all chemical transformations. These spectral observations are also consistent with Au13 clusters protected by similar ligand scaffolds suggesting that alterations to the wingtips of these clusters does not affect the conformation of the ligands.38
To evaluate the potential for bioconjugation of 3d to peptides with potentially reactive side chains, we examined the coupling reaction with lysine residues protected with acid- and base-labile protecting groups commonly used in solid-phase peptide synthesis. Cluster 3d was reacted with H-Lys(Boc)-OtBu using the same conditions described in Fig. 2A. ESI-MS confirmed that the completely coupled product was formed as the sole Au13 containing product (Fig. S13A). Furthermore, the acid-labile -Boc and -OtBu groups could be completely removed using 20% trifluoracetic acid (TFA) in DCM to produce a lysine functionalized cluster (5d) which was purified via SEC (see SI for details) to remove small molecular complex impurities and bulk gold species produced by significant aggregation of the cluster core during the harshly acidic deprotection (Fig. S13C). This synthesis was low yielding (20%) due to the instability of the cluster to harshly acidic conditions.
Next, a Lys(Fmoc)-OMe substrate was coupled to the cluster with ESI-MS confirming the formation of a single completely coupled product (Fig. S14A). Complete removal of the base labile -Fmoc and -OMe groups was achieved by stirring with 100 eq. LiOH in a 1
:
2 DMSO
:
H2O solution for 2 hours to give 5d. Following SEC (see SI for details), an improved 70% yield was obtained, indicating significantly improved stability under basic conditions (Fig. S14C). Due to the presence of basic –NH2 and acidic –COOH functional groups, cluster 5d was soluble in aqueous solutions at all pH values tested (pH = 1, 7, and 14).
These results demonstrate the robustness of this amide coupling procedure, allowing for the attachment of chemically diverse substrates and the removal of acid- and base-labile protecting groups. Consequently, this highly stable NHC framework can serve as a scaffold for the attachment of chemically diverse peptides to modulate the solubility and cellular uptake of the cluster.
The PLQYs (ΦPL) of 2d, 3d, 4d, and 5d were determined by two methods (see SI for details) and are listed in Table 2. The ΦPL remained high (∼30%) for 2d, 3d, 4d, and 5d in organic solvents indicating that the NHC framework surrounding the Au13 core remains rigid despite the addition of larger, more flexible species to the wingtips, thus preventing non-radiative decay via vibrational relaxation. This allows for the surface chemistry of the cluster to be tuned independently of the core structure which has a greater influence on the photoabsorption and photoluminescence properties.
| Cluster | λ PL (nm) | Relative ΦPL (%) | Absolute ΦPL (%) |
|---|---|---|---|
| a Methods for determination of QY are given in the SI. | |||
| 2d (EtOH) | 780 | 32 | 31 |
| 3d (EtOH) | 780 | 31 | 30 |
| 3d (PBS) | 828 | 6 | 4 |
| 4d (EtOH) | 780 | 30 | 29 |
| 5d (MeOH) | 780 | 28 | 25 |
| 5d (PBS) | 797 | 12 | 9 |
In PBS solutions, the λPL of 3d and 5d were red-shifted, which may indicate the stabilization of the emissive photoexcited state in water. The ΦPL of 3d in PBS was also significantly improved upon conjugation to lysine (5d). The –CO2H and –NH2 functionalities in 3d and 5d can lead to pH-dependent charge states of the ligand shell, which can affect the electronic structure of the cluster.40
In contrast, changing the ancillary NHC ligand system to monotopic substituents led to a blue shift of the emission maximum (2a: 695 nm in MeOH; 2b: 775 nm). Whereas the imidazole-protected cluster 2a displayed a high ΦPL of 17% in MeOH, the respective benzimidazole-protected cluster showed a notably reduced PL quantum yield (ΦPL) of 3% in EtOH. As apparent from cluster 2c, the linker unit of ditopic NHC–Au clusters affects the PL properties of clusters to a larger degree than changes to the NHC wingtip. Relative to cluster 2d, bridged by a o-xylyl linker, the λPL of 2c (755 nm in MeOH) bridged by a propyl linker is blue-shifted by 25 nm. Likewise, a lower ΦPL of 12% was observed, which is likely caused by a reduced ability of the propyl-linked NHC to rigidify the cluster core, leading to a promotion of non-radiative quenching of the excited state.
To further investigate the excited state properties and reactivity of cluster 3d, transient absorption and photoluminescence lifetime studies were undertaken in MeOH. Fig. 4 shows a transient absorption spectrum for 3d and corresponding Jablonski diagram illustrating the observed relaxation pathways for cluster 3d. Importantly, this cluster exhibits a long lived, 1.9 μs excited state, responsible for the emission properties of the cluster. The time scale is consistent with phosphorescent emission, but further experiments are needed to conclude intersystem crossing and the involvement of the triplet excited state. This long-lived excited state may prove advantageous for reacting with oxygen or other intracellular species for cancer therapy.
This study is one of the first examples detailing how the biological properties of AuNCs, which are primarily dictated by their hydrodynamic size and their organic ligands,41 can be tuned independently of their photoabsorption and photoluminescence properties. We envisage that the development of methods for the post-synthetic functionalization of AuNCs will enable their pharmacokinetics and pharmacodynamics to be altered similarly to small molecule therapeutics, accelerating the use of AuNCs in a therapeutic setting.
Supplementary crystallographic data for this paper can be obtained free of charge via the joint Cambridge Crystallographic Data Centre (CCDC) and Fachinformationszentrum Karlsruhe Access Structures service.
Supplementary information is available includes full characterization data for clusters including NMR spectra, photophysical characterization and stability studies. See DOI: https://doi.org/10.1039/d5sc02951a.
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