Open Access Article
Mahmoud A. Al-Qudah
*a,
Abdulrahman G. Alhamzani
b,
Hala I. Al-Jaberc,
Zain F. Migdadia,
Sultan T. Abu Orabid and
Abbas I. Alakhrasb
aDepartment of Chemistry, Faculty of Science, Yarmouk University, P.O. Box. 566, Irbid, 21163, Jordan. E-mail: mahmoud.qudah@yu.edu.jo; Fax: +96227211117; Tel: +96277420029
bDepartment of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, 11623, Saudi Arabia
cDepartment of Chemistry, Faculty of Science, Al-Balqa Applied University, Al-Salt, 19117, Jordan. E-mail: hala.aljaber@bau.edu.jo
dDepartment of Medical Analysis, Faculty of Science, Tishk International University, KRG, Erbil, Iraq
First published on 16th October 2025
Investigation of the chemical constituents of Cleome amblyocarpa growing wild in Jordan resulted in the isolation and structural elucidation of two new dammarane triterpenes along with 9 other known compounds. The new compounds were identified as 17-hydroxyambylone (1) and 15β-acetoxy-17α-hydroxycabralealactone (2). The known compounds included calycopterine (3), 17α-hydroxycabraleahydroxylactone (4), cleocarpanol (5), ambylone (6), β-sitosterol (7), β-sitosteryl glucoside (8), isorhamnetin-3-O-rhamnoside (9), kaempferol-3,7-O-dirhamnose (10) and 3′-O-methylquercetin-3,7-di-O-rhamnopyranoside (11). Structural elucidation of all isolated compounds was based on thorough investigation of their spectroscopic data including NMR (1D and 2D), HRESIMS, IR, and UV-Vis spectroscopy. LC-MS/MS analysis versus a selected set of authentic samples led to the detection of 21 constituents, including 9 of the isolated compounds. Antioxidant activities of isolated pure compounds were assessed individually and compared to ascorbic acid and α-tocopherol using DPPH˙ and ABTS˙+ assay methods. Compounds 9–11 showed strong antioxidant activities whereas compounds 4–6 exhibited low activity. New compounds 1 and 2 demonstrated moderate DPPH˙ radical scavenging power (IC50 = 14.70 ± 2.52 and 77.90 ± 3.77 μg mL−1, respectively) and a moderate ABTS˙+ scavenging effect (IC50 = 22.6 ± 0.04 and 78.30 ± 1.13 μg mL−1).
Cleome species are used globally in folk medicine for the treatment of many ailments like abdominal pain, rheumatism, scabies and diabetes. They are also reported to exert sudorific, irritant and sedative effects,2,3 and several species are well recognized for their anti-inflammatory, antiseptic, antimicrobial, carminative, anthelmintic, analgesic, antioxidant, and cytotoxicity activities.4–6 Phytochemical investigation of the selected Cleome species revealed the presence of diverse secondary metabolites, including terpenoids, phenols, alkaloids, flavonoids, anthraquinones, and glucosinolates.7–13
Cleome amblyocarpa Barratte & Murb. is a glandular-pubescent annual herb that grows up to 80 cm in height. It has a hairy coat that traps a layer of dust and sand grains on its erect multi-branched stem. The leaflets are elliptical, with three-foliolate lower leaves and simple upper leaves. The flowers have a light yellowish color with red-brownish tips. The fruits are flat and pendulous at maturity, with wholly tomentose seeds.1 This species grows wild in North and Northeastern tropical Africa as well as in West and Southwest Asia. It thrives in deserts and dry shrublands and blooms once or twice a year.14
In traditional herbal medicine, the leaves of C. amblyocarpa are used for the treatment of gastric and rheumatic diseases.15 In Tunisia, the plant is prescribed for the treatment of headaches, nausea, vomiting, and stomach pain,16 while in Egypt, its aerial parts are valued for their antibacterial and anti-inflammatory effects.17 Previous phytochemical studies on C. amblyocarpa have reported the presence of flavonoids, dammarane-type triterpenes, cembrane derivatives, stigma-4-en-3-one, lupeol, and taraxasterol.9,18,19
Following our thorough investigations of medicinal plants in Jordan and Mediterranean neighboring countries,6,20–22 herein we report the isolation and characterization of two new dammarane-type triterpenes along with other nine known compounds from the aerial parts of C. amblyocarpa (Fig. 1). Moreover, LC-MS/MS analysis of the plant extracts versus selected authentic samples resulted in the detection of 21 compounds, including ten of the isolated compounds (1–7, 9–11). The crude extracts (the butanol (CB) and the aqueous methanol (CM)) and the pure isolated compounds (1–6, 9–11) were screened for their in vitro antioxidant activity using DPPH˙ and ABTS˙+ scavenging assay methods.
Compound 1 was isolated as a white amorphous solid. Inspection of the IR spectrum of compound 1 indicated the presence of hydroxyl (3398 cm−1), lactone (1753 cm−1) and ether (1254 cm−1) groups (Fig. S1). The molecular ion peak observed at m/z 445.2927 in the HREIMS of compound 1 allowed the prediction of the molecular formula C27H42O5 ([M–H]−, calcd for [C27H41O5]–: 445.2954). Initial analysis of the 1H, 13C, DEPT, HMQC, COSY and HMBC spectra of compound 1 revealed signals for 27 nonequivalent carbons including 5 methyls, 10 methylenes, one oxygenated methylene (δC-19 68.0), 3 methines, 8 quaternary carbons three of which are oxygenated (δC-3 98.2, δC-17 83.4 and δC-20 93.0), in addition to one carbonyl carbon of a lactone moiety (δC
O 176.6) (Fig. S3). The 1H-NMR and HMQC spectra displayed signals for 5 methyl groups resonating at δH 0.88 (Me-30), 0.98 (Me-18), 1.03 (Me-29), 1.13 (Me-28) and 1.43 (Me-21); double doublet signals for the oxygenated C-19 (δC 68.0) methylene protons at δH 4.25 (1H, dd, J = 8.8, 2.7 Hz, H-19a) and 3.75 (1H, dd, J = 8.8, 1.6 Hz, H-19b) in addition to overlapping peaks in the range δH 1.42–2.22 assigned to the aliphatic protons of compound 1 (Fig. S2).
The combination of all these spectral data suggested that compound 1 is a damarane triterpene that is very similar to the structure of the damarane triterpenoid ambylone (compound 6), differing only in the detection of an extra hydroxyl group in compound 1.19,28 The location of this hydroxyl group was suggested to C-17 of the skeleton based on the disappearance of the methine signal δH-17 1.24 observed in compound 6. This assignment was further supported by the down field shift observed for C-17 in compound 1 (δC 83.4) when compared to C-17 in compound 6 (δC 49.1). Careful inspection of the different 2D NMR spectra including COSY, HMQC and HMBC (Fig. 2 and S4–S6) allowed the correct assignment of all oxygenated carbons in compound 1 (δC-3 98.2, δC-17 83.4 and δC-20 93.0). The HMBC spectrum of compound 1 revealed long range correlations between H-19 protons (δH 3.75 & 4.25) and each of C-10 (δC 32.6), C-5 (δC 49.5) and C-1 (δC 35.5), thus confirming oxygenation of C-19 and the substitution pattern of ring A. The location of the extra hydroxyl group at C-17 was evidenced from the long-range correlations observed between H-21 protons (δH 1.43) and each of C-20 (δC 93.0) and C-17 (δC 83.4) in addition to the correlation between H-16 (δH 1.52) and C-17. These correlations allowed identification of compound 1 as 17-hydroxyambylone.
Compound 2 was obtained from subFr. CMIII-3-sub-3 as pure white amorphous solid. The molecular formula C29H44O6 of 2 was characterized based on its HRESIMS, which revealed a molecular ion peak at m/z 487.3042 [M–H]− (calcd for [C29H43O6]–: 487.3060). The IR absorption bands at 3494, 1767, 1740, 1648 and 1295 cm−1 indicated the presence of hydroxyl, lactone, ketone, ester, and ether groups, respectively (Fig. S7).
The 1D spectra (Fig. S8–S11) and 2D (Fig. 2 and S12–S14) spectra (CDCl3) of compound 2 closely resembled those of the known dammarane triterpene 17α-hydroxycabralealactone (Takhi et al., 2011), except for the presence of an extra acetyl group. The 1H-NMR spectrum (Fig. 2 and S8) revealed 6 methyl singlets assigned to Me-21 (δH 1.47), Me-28 (δH 1.17), Me-19 (δH 1.09), Me-29 (δH 1.04), Me-18 (δH 1.01) and Me-30 (0.97). An additional methyl singlet signal resonating at 2.14 was attributed to the CH3CO protons. The overlapping peaks detected upfield the spectrum in the range δH 1.29–2.69 were typical of the different aliphatic protons of the suggested skeleton.4 However, the proton spectrum revealed a multiplet signal integrating for one proton and resonating at δH 3.81 (1H, m) that was assigned to H-15, where the acetyl group location was suggested.
The spectral data observed in the 13C-NMR and DEPT (CDCl3) experiments of 2 (Fig. S9–S11) were in total agreement with the suggested 17α-hydroxycabralealactone skeleton, with the extra acetyl groupe positioned at C-15. These spectra revealed signals for 29 carbon including 7 Me's, 9 CH2's, 3 CH's, one CH–O moiety (δC 68.3, assigned for C-15), 3 quaternary carbons in addition to other 3(C
O) groups comprising one ketone (δC 218.2), one lactone (δC 178.4) and one acetyl (δC 176.7) carbons. However, the location of the acetyl group at C-15 was confirmed by detailed analysis of the 2D-NMR spectra (Fig. 2 and S12–S14). The strong 1H–1H correlation observed in the COSY spectrum between H-15 (δH 3.81) and H-16 (δH 2.34) in addition to the long-range correlations observed in the HMBC spectrum between H-15 (δH 3.81) and each of C-16 (δC 32.5), C-14 (δC 49.9) and C-1′ (δC 176.7) confirmed the attachment of the acetyl group to C-15. Other important correlations observed between H-16 (δH 2.34) and C-17 (δC 83.9), H-21 (δH 1.47) with each of C-20 (δC 92.9) and C-17 (δC 83.9) in addition to the correlation observed between H-2′ (δH 2.14) and C-1′ (δC 176.7) helped in confirming the oxygenation pattern of rings D and E of the proposed structure. Based on these data, compound 2 was identified as 15β-acetoxy-17α-hydroxareabralealactone. Table 1 lists the 1H and 13C-NMR (CDCl3) chemical shifts for compounds 1, 2 and 6 (known compound ambylone) while Fig. 2 shows the important COSY and HMBC correlations in both new compounds 1 and 2.
| # | 1: 17-hydroxyambylone |
2: 15β-acetoxy-17α-hydroxareabralealactone | 6: ambylone | |||
|---|---|---|---|---|---|---|
| δH (J in Hz) | δC | δH (J in Hz) | δC | δH (J in Hz) | δC | |
| 1 | 1.25 (1H, m) | 35.5 | 1.18 (1H, m) | 39.9 | 1.19 (1H, m) | 33.3 |
| 1.51 (1H, m) | 1.51 (1H, m) | 1.50 (1H, m) | ||||
| 2 | 1.48 (1H, m) | 29.5 | 1.40 (1H, m) | 34.0 | 1.47 (1H, m) | 29.2 |
| 2.67 (1H, m) | 2.33 (1H, m) | 2.68 (1H, m) | ||||
| 3 | — | 98.2 | — | 218.2 | — | 98.0 |
| 4 | — | 40.5 | — | 47.4 | — | 40.5 |
| 5 | 1.90 (1H, m) | 49.5 | 1.95 (1H, m) | 47.4 | 1.85 (1H, m) | 49.7 |
| 6 | 1.37 (1H, m) | 19.8 | 1.36 (1H, m) | 19.6 | 1.36 (1H, m) | 19.7 |
| 2.46 (1H, m) | 2.05 (1H, m) | 2.56 (1H, m) | ||||
| 7 | 1.15 (1H, m) | 29.7 | 1.15 (1H, m) | 33.9 | 1.16 (1H, m) | 29.5 |
| 1.29 (1H, m) | 1.33 (1H, m) | 1.24 (1H, m) | ||||
| 8 | — | 39.8 | — | 40.8 | — | 39.2 |
| 9 | 1.51 (1H, m) | 46.2 | 1.42 (1H, m) | 50.0 | 1.48 (1H, m) | 45.1 |
| 10 | — | 32.6 | — | 36.8 | — | 35.6 |
| 11 | 1.21 (1H, m) | 22.6 | 1.21 (1H, m) | 21.9 | 1.21 (1H, m) | 22.6 |
| 1.95 (1H, m) | 1.60 (1H, m) | 1.60 (1H, m) | ||||
| 12 | 1.50 (1H, m) | 29.3 | 1.50 (1H, m) | 22.8 | 1.50 (1H, m) | 27.0 |
| 1.95 (1H, m) | 1.92 (1H, m) | 1.92 (1H, m) | ||||
| 13 | 1.58 (1H, m) | 45.1 | 1.55 (1H, m) | 46.1 | 1.55 (1H, m) | 43.3 |
| 14 | — | 49.9 | — | 49.9 | — | 50.0 |
| 15 | 1.90 (1H, m) | 32.5 | 3.81 (1H, m) | 68.3 | 1.95 (1H, m) | 31.2 |
| 1.14 (1H, m) | 1.18 (1H, m) | |||||
| 16 | 1.54 (1H, m) | 23.0 | 1.78 (1H, m) | 32.5 | 1.78 (1H, m) | 25.3 |
| 1.80 (1H, m) | 1.97 (1H, m) | 1.97 (1H, m) | ||||
| 17 | — | 83.4 | — | 83.9 | 1.24 (1H, m) | 49.1 |
| 18 | 0.98 (3H, s) | 15.3 | 1.01 (3H, s) | 16.1 | 0.91 (3H, s) | 15.2 |
| 19 | 4.25 (1Ha, dd, 8.8, 2.7); 3.75 (1Hb, dd, 8.8, 1.6) | 68.0 | 1.09 (3H, s) | 15.4 | 4.27 (1Ha, dd, 8.8, 2.7); 3.76 (1Hb, dd, 8.8, 1.6) | 68.0 |
| 20 | — | 93.0 | 92.9 | 90.0 | ||
| 21 | 1.43 (3H, s) | 22.9 | 1.47 (3H, s) | 22.9 | 1.38 (3H, s) | 22.5 |
| 22 | 1.48 (1H, m) | 35.5 | 1.48 (1H, m) | 29.2 | 1.48 (1H, m) | 35.6 |
| 2.53 (1H, m) | 2.00 (1H, m) | 2.57 (1H, m) | ||||
| 23 | 2.56 (1H, m) | 26.8 | 2.53 (1H, m) | 29.6 | 2.52 (1H, m) | 25.4 |
| 2.65 (1H, m) | 2.62 (1H, m) | 2.63(1H, m) | ||||
| 24 | — | 176.7 | — | 178.4 | — | 176.4 |
| 25 | — | — | — | — | — | — |
| 26 | — | — | — | — | — | — |
| 27 | — | — | — | — | — | — |
| 28 | 1.13 (3H, s) | 29.1 | 1.17 (3H, s) | 26.7 | 1.05 (3H, s) | 26.8 |
| 29 | 1.03 (3H, s) | 18.5 | 1.04 (3H, s) | 21.0 | 1.00 (3H, s) | 18.4 |
| 30 | 0.88 (3H, s) | 16.5 | 0.97 (3H, s) | 16.9 | 0.88 (3H, s) | 16.9 |
| 1′ | — | — | — | 176.7 | — | — |
| 2′ | — | — | 2.14 (3H, s) | 23.4 | — | — |
The ECD spectra of compounds 1 and 2 were recorded with a Jasco J-720 spectropolarimeter in chloroform (Fig. S15). The ECD values for 1 and 2 showed positive (300 nm) cotton effects.
Further qualitative analysis of the CB and CM fractions on LC-MS/MS revealed the presence of 21 compounds including 10 of the isolated compounds. Identification of these constituents was based on comparing their mass spectra with our built-in library that includes 59 authentic secondary metabolites isolated and identified in our laboratories. Table 2 lists the compounds identified in both fractions.
| No. | RT [min] | m/z meas* | Mwt calcd | Name | Class# | Molecular formulaa | CB* | CM* |
|---|---|---|---|---|---|---|---|---|
| a All are reported as [M–H]−; *CB: butanol fraction, CM: aqueous methanol fraction, #Class of secondary metabolite detected: PA: phenolic acid; Fl: flavonoid; DT: dammarane triterpene, St: sterol. | ||||||||
| 1 | 2.25 | 153.0228 | 154.0301 | 2,5-Dihydroxybenzoic acid | PA | C7H6O4 | + | — |
| 2 | 2.63 | 137.0247 | 138.0317 | 4-Hydroxybenzoic acid | PA | C7H6O3 | + | + |
| 3 | 4.94 | 609.1436 | 610.1509 | Luteolin-7,3′-di-O-glucoside | Fl | C27H30O16 | + | — |
| 4 | 5.28 | 609.1462 | 610.1535 | 3-Glu-7-RhaQuercetin | Fl | C27H30O16 | + | — |
| 5 | 5.55 | 593.1487 | 594.1585 | 3-Rha-7-RhaQuercetin | Fl | C27H30O15 | + | — |
| 6 | 5.78 | 563.1416 | 564.1488 | Apiin | Fl | C26H28O14 | + | — |
| 7 | 5.81 | 463.0884 | 464.0957 | Hyperoside | Fl | C21H20O12 | + | + |
| 8 | 5.90 | 413.1452 | 414.1525 | β-Sitosterol (7) | St | C29H50O | + | + |
| 9 | 6.14 | 593.1513 | 594.1585 | 3-O-Neohesperidoside kaempferol | Fl | C27H30O15 | + | + |
| 10 | 6.33 | 577.154 | 578.1612 | Kaempferol-3,7-O-dirhamnose (10) | Fl | C27H30O14 | + | + |
| 11 | 6.51 | 607.1644 | 608.1731 | 3′-O-methylquercetin-3,7-di-O-rhamnopyranoside (11) | Fl | C28H32O15 | + | + |
| 12 | 7.53 | 285.0401 | 286.0474 | 3,6,3′,4′-Tetrahydroxyflavone | Fl | C15H10O6 | + | — |
| 13 | 7.74 | 461.1064 | 462.1137 | Isorhamnetin-3-O-rhamnoside (9) | Fl | C22H22O11 | + | + |
| 14 | 9.97 | 299.0539 | 300.0612 | Hispidulin | Fl | C16H12O6 | + | + |
| 15 | 10.80 | 299.0539 | 300.0612 | Ladanetin | Fl | C16H12O6 | + | + |
| 16 | 14.02 | 373.0903 | 374.0976 | Calycopterine (3) | DT | C19H18O8 | + | + |
| 17 | 16.02 | 445.2897 | 446.2969 | 17-Hydroxyambylone (1) | DT | C27H42O5 | — | + |
| 18 | 18.43 | 473.2840 | 474.2914 | Cleocarpanol (5) | DT | C30H50O4 | — | + |
| 19 | 20.26 | 487.2993 | 488.3066 | 15β-acetoxy-17α-hydroxycabralealactone (2) | DT | C29H44O6 | — | + |
| 20 | 22.01 | 429.2944 | 430.3017 | Ambylone (6) | DT | C27H42O4 | — | + |
| 21 | 23.28 | 431.3171 | 432.3173 | 17α-hydroxycabraleahydroxylactone (4) | DT | C27H44O4 | — | + |
| Fraction/compound | TPC | TFC |
|---|---|---|
| CB | 103.53 ± 0.50 | 448.82 ± 6.30 |
| CM | 64.00 ± 1.47 | 120.53 ± 0.00 |
| Fraction/Compound | IC50 (μg mL−1) | |
|---|---|---|
| DPPH˙ | ABTS˙+ | |
| CB | 16.00 ± 0.50 | 7.50 ± 2.50 |
| CM | 18.00 ± 0.05 | 11.00 ± 0.50 |
| 1 | 14.70 ± 2.52 | 22.6 ± 0.04 |
| 2 | 77.90 ± 3.77 | 78.30 ± 1.13 |
| 3 | 7.10 ± 0.37 | 7.09 ± 0.70 |
| 4 | 168.00 ± 1.97 | n.d |
| 5 | 271.00 ± 6.14 | 193.00 ± 1.80 |
| 6 | n.d | n.d |
| 9 | 10.50 ± 1.24 | 7.97 ± 0.58 |
| 10 | 8.32 ± 0.85 | 2.38 ± 0.11 |
| 11 | 2.55 ± 0.07 | 1.25 ± 0.04 |
| Ascorbic acid | 1.58 ± 0.035 | 1.78 ± 0.06 |
| α-tocopherol | 1.79 ± 0.01 | 2.33 ± 0.01 |
Despite that the current results revealed moderate activity of the new compounds, further pharmacological screening of the plant material and the pure constituents may help in revealing their undiscovered therapeutic potentials.
LC-MS/MS was conducted on a Bruker Daltonik Impact II ESI-Q-TOF System equipped with a Bruker Daltonik Elute UPLC system (Bremen, Germany), both in the positive [M + H]+ and negative [M–H]− electrospray ionization modes. Apollo II ion Funnel electrospray source was used to power this instrument. The capillary capacity was 2500 V, the nebulizer gas pressure was 2.0 bar, the dry gas (nitrogen) flow rate was 8 L min−1, and the dry temperature was 200 °C. The mass resolution was 50
000 FSR (Full Sensitivity Resolution), while the TOF repetition rate was up to 20 kHz. The mass accuracy was <1 ppm.
The antioxidant activity of both fractions and isolated compounds (1–6, 9–11) was assessed using the DPPH˙ and ABTS˙+ assay methods, as outlined in the literature.6,22 Data are expressed as the mean ± SD of three independent experiments.
The butanol fraction was treated in a similar way. Briefly, CB (115.96 g) fraction was absorbed on silica gel (150 g, 70–230 mesh) and then chromatographed on a column packed with the same adsorbent (550 g) and eluted with a gradient mixture of CHCl3/MeOH of increasing polarity. The elution process afforded 100 fractions (500 mL each) that were consolidated into three major groups according to their TLC behavior (CBI − CBIII). Each group was then subjected to a combination of CC, TLC and recrystallization to separate its pure constituents. Fr. CBI (30.5 g) was separated on a silica gel column (250 g, 70–230 mesh) eluted with a gradient mixture of CHCl3/MeOH afforded 4 subfractions (subFr. CBI-1 to subFr. CBI-4). Further chromatographic separation of subFr. CBI-2 (6.5 g) on CC (150 g silica gel, 230–400 mesh, eluent system: gradient of Bz/EtOAc) yielded other four subfractions (subFr. CBI-sub-2-1 to subFr. CBI-2-sub-4). Purification of subFr. CBI-2-sub-2 (1.5 g) on CC (75 g silica gel, 230–400 mesh; eluent: EtOAc/MeOH of increasing polarity) afforded 9 (25 mg). SubFr. CBI-2-sub-3 (0.5 g) was purified on a sephadex LH-20 column to obtain 10 (50 mg). Fr. CBIII (3.0 g) was separated on a silica gel column (170 g, 70–230 mesh; eluent system: isocratic elution with EtOAc) affording 11 (28.5 mg).
Supplementary information is available. See DOI: https://doi.org/10.1039/d5ra04113a.
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