Open Access Article
Maryam Haghpanaha,
Ali Reza Molla Ebrahimlo
b and
Adeleh Moshtaghi Zonouz
*a
aDepartment of Chemistry, Faculty of Science, Azarbaijan Shahid Madani University, Tabriz, Iran. E-mail: adelehmz@yahoo.com; ac.moshtaghi@azaruniv.ac.ir
bDepartment of Chemistry, Khoy.C., Islamic Azad University, Khoy, Iran
First published on 27th May 2025
A series of 3-hydroxy-5-arylpyrazine-2-carboxamides, structural analogs of favipiravir, have been successfully synthesized using a green and sustainable method through a one-pot condensation reaction of arylglyoxals 1a–i and 2-aminopropanediamide 2 in an alkaline solution under heating conditions. The reaction is temperature-sensitive; when conducted at 80 °C, 5-aryl substituted pyrazine derivatives were predominantly obtained. In reactions with arylglyoxals 1a, 1d, 1h, and 1i, temperatures exceeding 80 °C produced a mixture of two regioisomeric pyrazine derivatives with significant efficiency. This method is highly desirable due to its short reaction time, simple purification of products, and the use of water as an eco-friendly solvent.
1,4-Pyrazine-3-carboxamide-based antiviral compounds have been under intensive study for the last 20 years.2,14 Favipiravir (6-fluoro-3-hydroxypyrazine-2-carboxamide, T-705), a synthetic analog of 1,4-pyrazine-3-carboxamide, is an antiviral drug that inhibits the RNA-dependent RNA polymerase of influenza virus. It is effective against a variety of RNA viruses but not against DNA viruses.2,15–20 In recent years, favipiravir has also been actively used against COVID-19.21
Favipiravir, a 3-OH substituted pyrazine derivative, exhibits acidic properties and can tautomerize to the keto form, as shown in Scheme 1.22 Favipiravir, a nucleobase analog, is a prodrug; its active form is favipiravir-RTP, a nucleoside analog. The nucleobase analog favipiravir first undergoes metabolic activation through phosphoribosylation to form ribofuranosyl-5′-monophosphate (Favipiravir-RMP, T-705-RMP), which is then converted through intracellular phosphorylation into its ribofuranosyl-5′-triphosphate metabolite (Favipiravir-RTP, T-705-RTP), most likely by a series of intracellular enzymes (Scheme 1).23–25 The fluoro group in the structure enhances favipiravir's binding energy with RNA polymerase.26 Literature suggests that the nitrogen atom undergoing phosphoribosylation is a promising target for structural modifications (Fig. 1).23 However, attempts to obtain the favipiravir riboside or the monophosphate revealed that its bond is prone to cleavage and the compound exhibited poor solubility.27
Favipiravir (T-705) was first synthesized by Furuta and co-workers28 (Japanese Toyama Chemical Co., Ltd) in 2000 in a seven-step process from 3-aminopyrazine-2-carboxylic acid. This approach had a poor overall yield of 0.44% (Scheme 2), but a second approach starting with aminomalonic acid diethyl ester and proceeding through a series of sequential reactions, improved the yield to 17%.29 Current research is focused on finding more efficient and practical ways to synthesize favipiravir (Scheme 3).30–46 Classical synthetic methods for producing favipiravir are thoroughly detailed in three recent reviews by Y. Titova,27 N. Al Bujuq,43 and N. Qin.46
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| Scheme 2 Favipiravir synthesis according to the strategy developed by Y. Furuta et al. (Toyama Chemical Co., Ltd).28 | ||
Structural analogs of favipiravir are also under study for antiviral activity. Of particular interest are the non-fluorinated T-705 analog (T-1105; 3-hydroxy-2-pyrazinecarboxamide) and it's active nucleoside 5′-triphosphate form (T-1105-RTP) (Fig. 1). T-1105 has shown promising results in the treatment of influenza virus H1N1and other RNA viruses.47–49 The antiviral activity of T-1105 and it's activated form T-1105-RTP depends on the cell lines. For example, T-1105 showed higher antiviral activity in MDCK cells. However, antiviral activity of T-1105-RTP was not detected in the three cell lines, A549, Vero cells HEK293T cells.49 Also its ribonucleoside analog T-1106 (3,4-dihydro-3-oxo-4-β-d-ribofuranosyl-2-pyrazinecarboxamide) has showed potent antiviral activity against RNA viruses without significant toxicity to mammalian cells.50–55 A number of in vitro and in vivo studies have shown an even higher efficacy of T-1105 and T-1106 compared to that of favipiravir.17,56 Synthesis of the new bioactive derivative of favipiravir, (E)-N-(4-cyanobenzylidene)-6-fluoro-3-hydroxypyrazine-2-carboxamide (cyanorona-20), was reported in 2021. Cyanorona-20 exhibited very significant anti-COVID-19 activity and interestingly demonstrated approximately 209- and 45-fold anti-SARS-CoV-2 selectivity/potency compared to favipiravir and remdesivir, respectively.57
In this study, we present the synthesis of novel structural analogs of favipiravir through an eco-friendly one-pot condensation reaction involving arylglyoxal monohydrates and 2-aminopropanediamide.
For this purpose, the arylglyoxalmonohydrates 1a–i were prepared by oxidation of corresponding aryl methyl ketones with selenium dioxide according to standard literature procedure (Scheme 4).58 2-Aminopropanediamide 2 was synthesized using modified literature methods via the ammonolysis of the ester groups of diethylaminomalonate hydrochloride salt with a 25% ammonia solution at room temperature in methanol (Scheme 5).59,60
Next, the reaction of phenylglyoxalmonohydrate (1a), and 2-aminopropanediamide (2) was selected as a model reaction. The condensation reaction of phenylglyoxalmonohydrate 1a (1.6 mmol), and 2-aminopropanediamide 2 (1.7 mmol) was carried out in water in the presence of sodium hydroxide under heating conditions. The reaction of 1a and 2 under basic conditions at 70 °C leads to the formation of sodium salt of 3a. Then acidification by acetic acid to afford 3a in 40% yield. We were pleased to find that this reaction is temperature-sensitive (Table 1). At 80 °C, the reaction also favors the formation of 3-hydroxy-5-phenylpyrazine-2-carboxamide 3a as main product in higher yield 55% (Table 1, entry 2), while temperatures exceeding 80 °C lead to a mixture of two possible regioisomeric pyrazine compounds with significant efficiency. At 90 °C, two regoisomeric compounds 3a and 4a were obtained in equal amounts (Table 1, entry 3). This indicates that temperature significantly affects the regioselectivity of the reaction. Two compounds were separated through crystallization from ethanol. The melting point of one of the products is in agreement with the value reported for the 3-hydroxy-6-phenylpyrazine-2-carboxamide (4a) with a melting point of 213 °C in the literature.60 Consequently, another regioisomeric compound, with a melting point of 257 °C, corresponds to 3-hydroxy-5-phenylpyrazine-2-carboxamide (3a).
The electron-withdrawing ketone group in arylglyoxals enhances the electrophilicity of the aldehyde carbonyl group. This increased electrophilicity results in a quicker reaction of the aldehyde carbonyl with the more nucleophilic NH2 group under kinetic conditions, favoring the formation of the product 3a. However, under thermodynamic conditions, both products 3a and 4a are generated as the reaction can progress to a more stable equilibrium. The proposed mechanism for the synthesis of 3-hydroxy-(5-aryl/6-aryl) pyrazine-2-carboxamides is shown in Scheme 6. The formation of product 3a versus 4a via two pathways depends not only on the relative electrophilicity of two carbonyl groups but also on the stability of the imine intermediates (A) and (B). Pathway 1, leading to product 3a, involves a less stable imine derivative (A), while pathway 2, leading to product 4a, proceeds through a more stable aryl imine (B).
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| Scheme 6 Plausible mechanism for the synthesis of 3-hydroxy-(5-aryl and 6-aryl) pyrazine-2-carboxamide derivatives. | ||
With optimized reaction conditions in hand (reaction in alkaline water at 80 °C), the scope of the reaction was explored with various arylglyoxalmonohydrates (Scheme 7 and Table 2).
| Entry | Reactant | Productb | Time (h) | Yieldc (%) | m.p. (°C) |
|---|---|---|---|---|---|
| a Reaction conditions: arylglyoxalmonohydrates (1.6 mmol), aminomalonamide (1.7 mmol), aqueous sodium hydroxide solution (12.5 N, 1 mL), 6 mL water at 80 °C, then glacial acetic acid (1 mL).b Yield of products 4a, 4d, 4h, and 4i at reaction temperature above 80 °C.c Yield of the isolated product after recrystallization.d Decompose before melting. | |||||
| 1 | ![]() |
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2 | 55 | 256–257 |
| 2 | ![]() |
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2 | 30b | 210–213 (ref. 60 213–216) |
| 3 | ![]() |
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2 | 65 | 238–240 |
| 4 | ![]() |
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2 | 60 | 254–255 (Dec.)d |
| 5 | ![]() |
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2 | 45 | 219–220 |
| 6 | ![]() |
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2 | 15b | 236–238 (Dec.)d |
| 7 | ![]() |
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2.5 | 48 | 275–278 |
| 8 | ![]() |
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2 | 72 | 269–270 (Dec.)d |
| 9 | ![]() |
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2 | 68 | 266–270 (Dec.)d |
| 10 | ![]() |
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2 | 48 | 217–220 |
| 11 | ![]() |
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2 | 15b | 200–204 |
| 12 | ![]() |
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2 | 50 | 225–226 (Dec.)d |
| 13 | ![]() |
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2 | 12b | 198–199 |
The structure of novel 3-hydroxy-5-arylpyrazine-2-carboxamide derivatives was confirmed using FT-IR, 1H NMR, and 13C NMR spectroscopy. For example, the FT-IR spectrum of 3-hydroxy-5-arylpyrazine-2-carboxamide 3a confirmed the presence of the functional groups OH and NH2 at 3435, 3264, 3211 cm−1, along with the amide carbonyl (NH–C
O) exhibiting a strong absorption band around 1666 cm−1. The 1H NMR spectrum of 3a displayed the aromatic protons of phenyl ring at 7.59–8.17 ppm, the CH proton of pyrazine ring at 8.76 ppm, and the NH2 protons at 8.42 and 8.82 ppm as two singlets, with the OH proton at 13.59 ppm. The partial double bond character of the carbon–nitrogen bond in the amide group results in restricted rotation, making the two NH2 protons of chemically distinct and leading to separate NMR signals. On the other hand, the two NH NMR signals of ortho hydroxy carboxamide would likely appear at different chemical shifts due to intramolecular hydrogen bonding and the different environments of the amide protons. The 13C NMR spectrum further confirmed the product by the presence of an amide carbonyl signal at 170.1 ppm, and C-3 of pyrazine ring at 168.6 ppm.
mp 188–189 °C (ref. 60 187–188 (Dec.)); IR (KBr):
= 3358, 3312, 3211 (NH2), 2892 (C–H), 1686 (C
O), 1658, 1286 (C–N) cm−1; 1H NMR (DMSO-d6, 250 MHz): δ = 2.88 (s, 1H, CH), 3.74 (s, 2H, NH2), 7.21 (s, 2H, (C
O)NH2), 7.40 (s, 2H, (C
O)NH2) ppm; 13C NMR (DMSO-d6, 62 MHz): δ = 58.6 (CH), 172.2 (C
O) ppm.
= 3435, 3264, 3206 (NH2, OH), 1666 (C
O) cm−1; 1H NMR (500 MHz, DMSO-d6): δ = 7.54–7.55 (m, 3H, Ar–H), 8.15–8.16 (m, 2H, Ar–H), 8.42–8.82 (s, 2H, NH2), 8.75 (s, 1H, pyrazine H), 13.59 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 125.76, 127.41, 129.19, 130.25, 139.86, 142.78, 154.00, 168.64 (C–OH), 170.12 (C
O) ppm; anal. calcd for C11H9N3O2: C, 61.39; H, 4.22; N, 19.53. Found: C, 61.42; H, 4.36; N, 19.80.
= 3433 (OH), 3266, 3210 (NH2, OH), 1665 (C
O) cm−1; 1H NMR (500 MHz, DMSO-d6): δ = 7.46–7.48 (m, 1H, Ar–H), 7.49–7.55 (m, 2H, Ar–H), 8.15–8.16 (m, 2H, Ar–H), 8.42 and 8.82 (s, 2H, NH2), 8.76 (s, 1H, pyrazine H), 13.55 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 127.69, 128.00, 129.41, 130.92, 135.74, 153.64, 162.62 (C–OH), 169.87(C
O) ppm; anal. calcd for C11H9N3O2: C, 61.39; H, 4.22; N, 19.53. Found: C, 61.41; H, 4.32; N, 19.79.
= 3566, 3248, 3211 (NH2, OH), 1630 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.69–7.73 (m, 2H, Ar–H), 8.06–8.10 (m, 2H, Ar–H), 8.39 (s, 1H, pyrazine H), 8.75 and 8.79 (s, 2H, NH2), 13.60 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 121.62, 125.13, 129.72, 131.89, 132.49, 134.33, 152.73, 161.43 (C–OH), 170.08 (C
O) ppm; anal. calcd for C11H8BrN3O2: C, 44.92; H, 2.74; N, 14.29. Found: C, 44.95; H, 2.89; N, 14.46.
= 3442, 3278, 3211 (NH2, OH), 1666 (C
O) cm−1; 1H NMR (500 MHz, DMSO-d6): δ = 7.60 (s, 1H, Ar–H), 7.62 (s, 1H, Ar–H), 8.19 (s, 1H, Ar–H), 8.20 (s, 1H, Ar–H), 8.44 and 8.84 (s, 2H, NH2), 8.78 (s, 1H,pyrazine H), 13.58 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 129.57, 132.90, 134.06, 136.23, 152.84, 161.51 (C–OH), 170.20 (C
O) ppm; anal. calcd for C11H8ClN3O2: C, 52.92; H, 3.23; N, 16.83. Found: C, 53.15; H, 3.38; N, 16.99.
= 3445, 3277, 3211 (NH2, OH),1673 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.24–7.35 (m, 2H, Ar–H), 8.14–8.20 (m, 2H, Ar–H), 8.40 (s, 1H, pyrazine H), 8.71 and 8.85 (m, 2H, NH2), 13.52 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 116.63, 128.58, 130.18, 130.32, 132.68, 153.02, 162.26 (C–OH), 166.22 (C–F), 170.23 (C
O) ppm; anal. calcd for C11H8FN3O2: C, 56.65; H, 3.46; N, 18.02. Found: C, 56.72; H, 3.61; N, 18.25.
= 3444, 3280, 3210 (NH2, OH), 1671 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.29–7.36 (m, 2H, Ar–H), 8.21 (s, 2H, Ar–H), 8.42 (s, 1H, pyrazine H), 8.76–8.80 (s, 2H, NH2), 13.58 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 116.68, 128.58, 130.35, 131.77, 132.73, 153.03, 161.51 (C–OH), 166.24 (C–F), 170.23 (C
O) ppm; anal. calcd for C11H8FN3O2: C, 56.65; H, 3.46; N, 18.02. Found: C, 56.68; H, 3.62; N, 18.32.
= 3418 (NH2, OH), 1669 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.50–8.54 (m, 7H, Ar–H, pyrazine H, NH2), 8.89 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 122.92, 125.31, 128.74, 130.83, 132.90, 154.60, 161.75 (C–OH), 167.14 (C–NO2), 170.06 (C
O) ppm; anal. calcd for C11H8N4O4: C, 50.77; H, 3.10; N, 21.53. Found: C, 50.60; H, 3.20; N, 21.70.
= 3428, 3274, 3212 (NH2, OH), 1662(C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 2.32 (s, 3H, CH3), 7.24–7.27 (d, J = 7.5 Hz, 2H, Ar–H), 8.03–8.06 (d, J = 7.5 Hz, 2H, Ar–H), 8.37 (s, 1H, pyrazine H), 8.71–8.83 (m, 2H, NH2) 13.38 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 21.25 (CH3), 126.23, 127.75, 130.11, 132.41, 138.75, 141.33, 159.79, 161.51 (C–OH), 170.22 (C
O) ppm; anal. calcd for C12H11N3O2: C, 62.87; H, 4.84; N, 18.33. Found: C, 62.90; H, 4.94; N, 18.50.
= 3450, 3271 (OH, NH2), 1610 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 3.81 (s, 3H, OCH3), 6.97–7.00 (d, J = 7.5 Hz, 1H, Ar–H), 7.03–7.06 (d, J = 7.5 Hz, 1H, Ar–H), 8.07 (s, 1H, Ar–H), 8.11 (s, 1H, Ar–H), 8.30 (s, 1H, pyrazine H), 8.68–8.85 (m, 2H, NH2), 13.34 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 55.82 (OCH3), 114.57, 128.15, 129.47, 131.63, 141.14, 153.76, 161.96 (C–OH), 169.42 (C–OCH3), 170.30 (C
O) ppm; anal. calcd for C12H11N3O3: C, 58.77; H, 4.52; N, 17.13. Found: C, 58.85; H, 4.67; N, 17.40.
= 3439, 3275, 3213 (OH, NH2), 1669 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.56–7.58 (m, 3H, Ar–H), 7.97–8.06 (m, 4H, Ar–H), 8.30 (s, 1H, pyrazine H), 8.78 and 8.94 (s, 2H, NH2), 13.49 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 124.55, 125.23, 127.00, 127.30, 128.09, 128.78, 129.13, 132.86, 133.35, 134.36, 153.84, 161.74 (C–OH), 170.26 (C
O) ppm; anal. calcd for C15H11N3O2: C, 67.92; H, 4.18; N, 15.84. Found: C, 67.95; H, 4.30; N, 15.98.
= 3433, 3267, 3205 (OH, NH2), 1671 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.45–8.30 (m, 8H, pyrazine H, Ar–H), 8.81–8.95 (s, 2H, NH2), 13.54 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 124.53, 126.49, 129.74, 130.48, 130.95, 133.07, 134.36, 142.64, 153.84, 161.59 (C–OH), 170.25 (C
O) ppm; anal. calcd for C15H11N3O2: C, 67.92; H, 4.18; N, 15.84. Found: C, 67.85; H, 4.28; N, 16.12.
= 3444, 3282, 3058 (OH, NH2), 1661(C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.47 (m, 3H, Ar–H), 7.73–7.83 (m, 5H, Ar–H), 8.23 (s, 1H, pyrazine H), 8.79 and 9.02 (s, 2H, NH2), 13.20 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 126.15, 127.23, 127.66, 128.38, 129.49, 131.85, 134.92, 139.93, 140.45, 142.63, 154.63, 162.11 (C–OH), 170.09 (C
O) ppm; anal. calcd for C17H13N3O2: C, 70.09; H, 4.50; N, 14.42. Found: C, 70.22; H, 4.65; N, 14.59.
= 3441, 3279, 3056 (OH, NH2), 1660 (C
O) cm−1; 1H NMR (250 MHz, DMSO-d6): δ = 7.47 (m, 4H, Ar–H), 7.73 (m, 5H, Ar–H), 8.00 (s, 1H, pyrazine H), 8.24–8.40 (m, 1H, NH2), 8.84–8.93 (m, 1H, NH2), 13.54 (s, 1H, OH) ppm; 13C NMR (62 MHz, DMSO-d6): δ = 126.49, 127.02, 129.41, 129.74, 130.48, 130.94, 134.36, 135.29, 142.64, 153.84, 161.59 (C–OH), 170.25 (C
O) ppm; anal. calcd for C17H13N3O2: C, 70.09; H, 4.50; N, 14.42. Found: C, 70.12; H, 4.64; N, 14.66.Footnote |
| † Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d5ra02613j |
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