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Synthesis of fluorinated 3-aminobenzofurans via a tandem SNAr-cyclocondensation strategy

Hugh W. Tawella, William Robinsonb, Yuqi Lia, Graham J. Tizzardc, Simon J. Colesc, Avninder S. Bhambrab, Mark Edgara and George W. Weaver*a
aDepartment of Chemistry, Loughborough University, Epinal Way, Loughborough, Leicestershire LE11 3TU, UK. E-mail: g.w.weaver@lboro.ac.uk
bSchool of Allied Health Sciences, De Montfort University, The Gateway, Leicester, LE1 9BH, UK
cUK National Crystallography Service, Chemistry, University of Southampton, University Road, Southampton, SO17 1BJ, UK

Received 22nd March 2025 , Accepted 11th April 2025

First published on 22nd April 2025


Abstract

A small library of twenty-seven novel 3-amino-2,6-disubstituted-4,5,7-trifluorobenzofurans was successfully synthesized with the compounds formed in low to good yield using a tandem SNAr-cyclocondensation reaction of 4-substituted perfluorobenzonitriles with α-hydroxycarbonyl compounds employing DBU as base. The compounds were prepared as part of a medicinal chemistry project to develop novel fluorinated heterocyclic leads and were characterised by 1H and 19F NMR spectroscopy, IR spectroscopy, high resolution mass spectrometry and elemental analysis. The X-ray crystal structure of the 2-(4-methoxybenzoyl)-6-morpholino derivative was determined, which showed the benzoyl substituent to be coplanar with the benzofuran ring, and to form a hydrogen bond to the 3-amino group. Attempts to synthesise the corresponding 3-unsubstituted or 3-methyl analogues using 4-substituted perfluoro-benzaldehydes or acetophenones were unsuccessful, with cleavage of the carbonyl group occurring. A mechanistic study indicated that alkoxide ions attacked the carbonyl group, rather than effecting SNAr reaction at C-2, leading to loss of a perfluoroaryl anion which was trapped with D2O.


Introduction

Benzofurans are an important class of heterocyclic compound and have found diverse application in medicinal chemistry as antibacterial, antimicrobial, anti-ulcer and antimalarial agents,1 and as ischemic cell death inhibitors.2 Methods to prepare both synthetic3,4 and naturally occurring5 benzofurans have been reviewed recently. As part of a programme to develop new leads based on polyfluorinated scaffolds, we have applied our general approach to the rapid construction of fluorinated heterocycles through the use of reliable SNAr reactions of perfluorinated arene building blocks to effect easy annelation of a new heteroatom ring. Having demonstrated this strategy in the synthesis of benzothiophene6 derivatives, in this paper we report the preparation of polyfluorinated benzofuran derivatives. The presence of fluorine imparts desirable properties for drug development, and also allows additional functionalisation through further SNAr reaction.

Results and discussion

The synthesis of the benzofuran targets first required the preparation of 4-substituted tetrafluorobenzonitrile derivatives 2 (Scheme 1). Sandford and co-workers have shown7 that nucleophilic substitution in pentafluorobenzonitrile 1 occurred regioselectively, at first the 4-, and then the 2-position, and reported the synthesis of the 4-morpholino derivative 2e by heating 1 with morpholine in THF or MeCN in the presence of diisopropylethylamine. We found substitution of the 4-fluorine atom by amines, imidazoles and phenols occurred more rapidly in DMF as solvent, and the benzonitriles 2a–h were formed in good yield (typically >80%) after 15 h at room temperature.
image file: d5ra02024g-s1.tif
Scheme 1 Synthesis of 4-substituted tetrafluorobenzonitriles and their conversion to 3-amino-2,6-disubstituted-4,5,7-trifluorobenzofurans.

After successfully obtaining the benzonitrile precursors 2, conversion to substituted fluorinated benzofurans was explored. Reaction with α-hydroxy carbonyl compounds 3 (Scheme 1) as bis-nucleophilic reagents was investigated. Suh and co-workers have synthesised non-fluorinated benzofurans, active as ischemic cell death inhibitors, utilising a related strategy.2 Methyl glycolate, hydroxyacetone and two hydroxyacetophenones were employed as nucleophiles to react with benzonitriles 2. The latter were prepared by reaction of the corresponding bromoacetophenones with sodium formate in ethanol (Scheme 2). The intermediate formate esters were not observed, presumably undergoing transesterification in situ. The use of DBU as base was then found to be effective in promoting attack of the alcohol at the 2-position of the tetrafluorobenzontriles 2, and subsequent enolisation and cyclo-condensation with the nitrile group to close the five-membered furan ring forming compounds 4 in low to high yield (Fig. 1).


image file: d5ra02024g-s2.tif
Scheme 2 Preparation of α-hydroxyacetophenone bis-nucleophiles.

image file: d5ra02024g-f1.tif
Fig. 1 Structures and isolated yields of the novel fluorinated benzofurans synthesised.

Reaction was found to proceed well in DMF at 80 °C in 2–3 h although boiling THF was also suitable as a solvent. None of the intermediate 5 was observed indicating the enolisation and cyclisation was rapid in either solvent. On completion of the reaction, the crude products, in most cases, precipitated as solids on dilution of the reaction mixture with water. Products were chromatographed to analytical purity or recrystallized from ethanol as they were to be screened for biological activity. The structures of compounds isolated were confirmed by 1H, 19F and 13C NMR and IR spectroscopy. Composition and purity were confirmed by HRMS and combustion analysis. The 19F NMR spectra in most cases showed three distinct signals in the range 5–20 ppm (relative to C6F6) for the trifluorinated products. For example the 2-acetyl-6-morpholino compound 4eb showed doublet signals at 11.5 (J 17 Hz) and 9.3 (J 20 Hz) and a matching double doublet at 10.3 for the F-5 atom. The amino group protons of 4eb exhibited a singlet peak at 5.88 in the 1H NMR spectrum with the other derivatives having signals in the range 5.6–6.2 ppm. The structure of the 2-(4-methoxybenzoyl)-6-morpholino substituted benzofuran 4ed was confirmed by single crystal X-ray diffraction analysis (Fig. 2). This showed the 4-methoxybenzoyl group to be coplanar with the benzofuran ring (plane twist angle = 1.21(3)°, plane fold angle = 7.43(3)°) and to form an intramolecular hydrogen bond to the neighbouring 3-amino substituent (N1⋯O1 = 2.7709(11) Å).


image file: d5ra02024g-f2.tif
Fig. 2 Molecular structure of benzofuran 4ed determined by single crystal X-ray diffraction. ADP ellipsoids shown at 50% probability.

The synthesized compounds are currently undergoing evaluation as cytotoxic agents against a range of pathogens.

We then investigated the possibility of synthesising the analogous 3-unsubstituted, or 3-methyl benzofurans using 4-substituted tetrafluorobenzaldehydes 6a or acetophenones 6b (Scheme 3) as substrates. However, despite precedent from our earlier work using methyl thioglycolate which afforded benzothiophenes,6 attempted reactions with methyl glycolate in the presence of base (DBU or NaH) failed to give the desired benzofurans 7, and deacylation of the substrates 6 was observed. The tetrafluorobenzene derivatives 8 were identified by the characteristic triplet of triplets signal around 6.9 ppm (tt, J = 9, 7 Hz) in the 1H NMR spectra of the products. It appears that the alkoxide ion generated (Scheme 4) attacks the carbonyl group forming a hemi-acetal anion 9a which then collapses expelling the fluoroaryl anion 11. This was confirmed by conducting a reaction of the 4-morpholinotetrafluorobenzaldehyde 6ea in deuterated methanol which led to the benzene derivative 8e with up to 95% deuterium incorporation (Scheme 5). This finding is in line with early reports that pentafluorobenzaldehyde fails to undergo the Cannizzaro reaction. Isolation of S-benzylthiouronium formate indicated the aldehyde group was lost as formate.8 The reaction appears to be a particularly facile version of the Haller–Bauer reaction.9 Base catalysed ring opening of cyclic perfluorobenzocycloalkenones has recently been reported, which also involves cleavage of the aryl carbonyl bond, generating tetrafluoroarylperfluoroalkanoic acids.10 A related study on the rate of protodeboronation of arylboronic acids, also invoking an aryl anion intermediate, showed the perfluoroaryl derivative had a half-life of only 2.6 ms in aqueous dioxane at pH 13.11


image file: d5ra02024g-s3.tif
Scheme 3 Attempted synthesis of 4,5,7-trifluorobenzofurans from perfluorobenzaldehydes or perfluoroacetophenones.

image file: d5ra02024g-s4.tif
Scheme 4 Alkoxide induced cleavage mechanism leading to protio-deacylation.

image file: d5ra02024g-s5.tif
Scheme 5 Deuterium incorporation confirmed tetrafluoroaryl anion formation.

When either pentafluorobenzaldehyde 12a or pentafluoroacetophenone 12b was treated with methoxide (Scheme 6) and the reaction followed by NMR spectroscopy we were able to identify the mono- and di-substitution products, 13 and 14, and the deacylated 1,3-dimethoxybenzene 15 which indicated that substitution occurs before deacylation. In the reaction with methyl glycolate it is thought that the more bulky nucleophile will attack the carbonyl group preferentially rather than adding to the more hindered 2-position of the benzene ring.


image file: d5ra02024g-s6.tif
Scheme 6 Methoxide induced substitution and deacylation in pentafluorobenzaldehyde and pentafluoroacetophenone.

In conclusion twenty-seven fluorinated 3-aminobenzofurans have been accessed via a tandem SNAr cyclo-condensation reaction of perfluorobenzonitriles with α-hydroxycarbonyl compounds, and were characterized by IR spectroscopy, NMR spectroscopy, HRMS, and elemental analysis. Single crystal X-ray diffraction analysis of the 2-methoxybenzoyl-6-morpholino-derivative confirmed the formation of the core 3-aminobenzofuran ring. The compounds are undergoing screening for biological activity against a number of pathogens and the biological results will be reported in due course.

Experimental

Starting materials for the synthesis of new compounds were obtained from Sigma Aldrich, Alfa Aesar or Fluorochem and used as received. 40–60 Micron silica was used for column chromatography and thin layer chromatography (TLC) was performed using Supleco pre-cut aluminium backed silica gel plates. Compounds on TLC plates were visualised under UV radiation at 254 nm wavelength. Melting points were carried out on a Stuart SMP10 melting point apparatus. IR spectroscopy was carried out on a PerkinElmer Spectrum 65 FT-IR, and NMR spectra were recorded on JEOL ECS400 or JEOL ESZ500 spectrometers with 1H spectra recorded at 400 or 500 MHz, 13C spectra at 100 or 125 MHz and 19F spectra at 376 or 470 MHz respectively. High resolution mass spectrometry (HRMS) was carried out on a ThermoFisher Exactive (Orbitrap) instrument with an ESI probe and a max ion source. X-ray crystallography was carried out at the UK National Crystallography Service, Southampton.

General procedure for the synthesis of 4-substituted perfluorobenzonitriles

Nucleophile R-H (15 mmol, 1 eq.) was dissolved in DMF (5 mL) and triethylamine (3.04 g, 30 mmol, 2 eq.) was added. Pentafluorobenzonitrile (2.90 g, 15 mmol, 1 eq.) was added and the reaction mixture was stirred at room temperature for 15 h. Water (10 mL) was added to the reaction mixture which was filtered under suction if a solid precipitated, and the solid product dried under vacuum, or, if no solid formed on addition of water, the mixture was extracted with ethyl acetate (3 × 25 mL). The combined organic layers were washed with brine (3 × 10 mL), dried over MgSO4, filtered and evaporated to dryness on a rotary evaporator to give the following compounds.
4-(1H-Benzo[d]imidazol-1-yl)-2,3,5,6-tetrafluorobenzonitrile (2a). Yellow solid (3.97 g, 91%), mp 160–167 °C. 1H-NMR (500 MHz, CDCl3) δH 8.01 (t, J = 1.5 Hz, 1H), 7.88 (m, 1H), 7.41 (m, 2H), 7.25 (m, 1H). 19F-NMR (471 MHz, CDCl3) δF 32.3 (m, 2F), 20.2 (m, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 148.0, 143.2, 142.1, 141.7, 132.7, 125.2, 124.3, 121.5, 121.2, 110.6, 106.7, 94.3. IR, νmax/cm−1 3022, 2244, 1726, 1652, 1609, 1496, 1476, 1455, 1385, 1345, 1304, 1265, 1208, 1128, 1114, 1013, 990, 887 and 867. HRMS expected for C14H6F4N3 292.0492 observed m/z 292.0492 [M + H+].12
2,3,5,6-Tetrafluoro-4-(1H-imidazol-1-yl)benzonitrile (2b). Colourless solid (3.56 g, 99%), mp 52–56 °C. 1H-NMR (400 MHz, CDCl3) δH 7.78 (d, J = 0.8 Hz, 1H), 7.22 (d, J = 18.0, 1.6 Hz, 2H). 19F-NMR (376 MHz, CDCl3) δF 31.7 (m, 2F), 16.9 (m, 2F). IR, νmax/cm−1 3584, 3344, 3137, 2919, 2233, 1696, 1667, 1655, 1520, 1504, 1437, 1362, 1314, 1287, 1226, 1169, 1107, 1085, 1040, 993, 809 and 738. HRMS expected for C10H4F4N3 274.0962 observed m/z 274.0961 [M + H+].13
4-(Cyclopropylamino)-2,3,5,6-tetrafluorobenzonitrile (2c). White solid (3.16 g, 92%), mp 115–122 °C. 1H-NMR (500 MHz, CDCl3) δH 4.82 (s, 1H), 2.96 (m, 1H), 0.86 (m, 2H), 0.66 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 26.2 (m, 2F), 2.9 (d, J = 14.1 Hz, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 148.0, 135.8, 134.0, 109.1, 79.3, 27.2, 8.8. IR, νmax/cm−1 3420, 3336, 3095, 3019, 2989, 2919, 2849, 2236, 1657, 1537, 1513, 1458, 1361, 1266, 1019, 836 and 737. HRMS expected for C10H7F4N2 231.0540 observed m/z 231.0547 [M + H+].
4-(Cyclopentylamino)-2,3,5,6-tetrafluorobenzonitrile (2d). White solid (3.55 g, 92%), mp 99–107 °C. 1H-NMR (500 MHz, CDCl3) δH 4.40 (s, 2H), 4.25 (m, 1H), 2.03 (m, 2H), 1.70 (m, 4H), 1.52 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 26.4 (m, 2F), 1.9 (d, J = 14.3 Hz, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 148.1, 135.7, 133.1, 109.2, 78.5, 56.6, 34.7, 23.7. IR, νmax/cm−1 3467, 3336, 2959, 2924, 2854, 2239, 1655, 1535, 1513, 1480, 1438, 1365, 1314, 1288, 1189, 1126, 1072, 988, 960 and 721. HRMS expected for C12H10F4N2Na 281.0672 observed m/z 281.0673 [M + Na+].
2,3,5,6-Tetrafluoro-4-morpholinobenzonitrile (2e)7. White solid (3.11 g, 80%), mp 76–82 °C. 1H-NMR (500 MHz, CDCl3) δH 3.82 (t, J = 4.5 Hz, 4H), 3.42 (m, 4H). 19F-NMR (471 MHz, CDCl3) δF 27.8 (m, 2F), 12.2 (m, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 148.2, 140.6, 135.4, 108.4, 84.5, 67.1, 51.0. IR, νmax/cm−1 2968, 2920, 2860, 2235, 1647, 1491, 1444, 1372, 1339, 1263, 1172, 1110, 1067, 1031, 981, 963, 916,858 and 725. HRMS expected for C11H8F4N2ONa 283.0465 observed m/z 283.0465 [M + Na+]. In agreement with literature values.7
2,3,5,6-Tetrafluoro-4-(4-methylpiperazin-1-yl)benzonitrile (2f). White solid (4.04 g, 99%), mp 72–80 °C. 1H-NMR (500 MHz, CDCl3) δH 3.40 (t, J = 4.5 Hz, 4H), 2.49 (t, J = 4.5 Hz, 4H), 2.31 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 27.2 (m, 2F), 12.1 (m, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 148.2, 140.5, 135.8, 108.5, 83.6, 55.2, 50.6, 46.2. IR, νmax/cm−1 3436, 3031, 2984, 2947, 2922, 2849, 2804, 2777, 2755, 2709, 2589, 2236, 1860, 1790, 1723, 1647, 1498, 1455, 1390, 1377, 1336, 1292, 1233, 1184, 1153, 1137, 1076, 988, 935, 816 and 782. HRMS expected for C12H12F4N3 274.0962 observed m/z 274.0961 [M + H+].
4-(4-Bromophenoxy)-2,3,5,6-tetrafluorobenzonitrile (2g). White solid (3.41 g, 66%), mp 58–65 °C. 1H-NMR (500 MHz, CDCl3) δH 7.44 (dt, J = 9.0, 3.5 Hz, 2H), 6.89 (dt, J = 9.5, 3.0 Hz, 2H). 19F-NMR (471 MHz, CDCl3) δF 29.9 (m, 2F), 11.4 (m, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 155.5, 148.1, 141.4, 139.1, 133.1, 118.0, 117.6, 107.1, 90.3. IR, νmax/cm−1 3681, 3448, 3095, 3063, 2936, 2856, 2774, 2648, 2559, 2436, 2323, 2274, 2243, 2042, 1889, 1869, 1787, 1651, 1581, 1497, 1482, 1437, 1404, 1317, 1297, 1277, 1209, 1168, 1102, 1010, 996, 936, 812, 699 and 581. HRMS expected for C13H479BrF4NO·Na 367.9305 observed m/z 367.9306 [M + Na+].
2,3,5,6-Tetrafluoro-4-(4-nitrophenoxy)benzonitrile (2h). White solid (4.10 g, 87%), mp 124–131 °C. 1H-NMR (500 MHz, CDCl3) δH 8.27 (dt, J = 9.6, 3.2 Hz, 2H), 7.12 (dt, J = 9.5, 2.4 Hz, 2H). 19F-NMR (471 MHz, CDCl3) δF 31.3 (m, 2F), 12.4 (m, 2F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 160.3, 148.2, 144.6, 141.4, 137.7, 126.4, 116.4, 106.9, 91.6. IR, νmax/cm−1 3114, 3082, 2249, 1706, 1646, 1615, 1589, 1487, 1438, 1340, 1331, 1317, 1298, 1217, 1166, 1117, 994, 958, 855, 751 and 686.
2-Hydroxy-1-(4-methoxyphenyl)ethanone (3d). 2-Bromo-4-methoxyacetophenone (5.66 g, 24.7 mmol) was dissolved in ethanol (90 mL) and sodium formate (10.8 g, 159 mmol) was added and the mixture was refluxed for 12 h. The reaction was cooled to room temperature and concentrated under vacuum. Water (10 mL) was then added to the residue and the mixture extracted with ethyl acetate (3 × 25 mL). The combined organic layers were dried with MgSO4, filtered and evaporated to dryness to give an orange solid (3.41 g, 83%), mp 105–111 °C. 1H-NMR (500 MHz, CDCl3) δH 7.88 (dt, J = 9.0, 2.0 Hz, 2H), 6.95 (dt, J = 9.0, 2.0 Hz, 2H), 4.81 (s, 2H), 3.87 (s, 3H), 3.58 (s, 1H). 13C-NMR (126 MHz, CDCl3) δC 196.8, 164.5, 130.1, 126.4, 114.3, 65.0, 55.4. IR, νmax/cm−1 3388, 3080, 3058, 3018, 2975, 2927, 2844, 2054, 1914, 1733, 1681, 1674, 1603, 1577, 1512, 1474, 1464, 1444, 1425, 1406, 1315, 1250, 1185, 1108, 1030, 1008, 992, 979, 836, 822, 635, 609, 569, 497 and 473. GC-MS 166.10.

General procedure for the synthesis of 2,6-disubstututed 3-amino-4,5,7-trifluoro-1-benzofurans 4

The appropriate benzonitrile derivative 2a–h (2 mmol) and hydroxy carbonyl compound 3a–d (2 mmol) were dissolved in the minimum convenient volume of either anhydrous THF (3 mL) or DMF (4 mL) and DBU (0.75 mL, 5 mmol) added. The resulting solution was heated under reflux if THF was employed, or at 80 °C for reactions in DMF, for 1–3 h until consumption of starting material was complete by TLC analysis. The cooled mixture was diluted with water (20 mL) and product collected by suction filtration if solid precipitated, or by extraction with ethyl acetate (3 × 50 mL) if no solid formed. The product was then purified by column chromatography over silica, using gradient elution with dichloromethane[thin space (1/6-em)]:[thin space (1/6-em)]methanol (99[thin space (1/6-em)]:[thin space (1/6-em)]1 to 95[thin space (1/6-em)]:[thin space (1/6-em)]5), or by recrystallisation from ethanol.
Methyl 3-amino-6-(1H-1,3-benzodiazol-1-yl)-4,5,7-trifluoro-1-benzofuran-2-carboxylate 4aa. Methyl glycolate (0.16 mL, 2.0 mmol) and 4-benzimidazol-1-yltetrafluorobenzonitrile (0.603 g, 2.07 mmol) in DMF afforded 4aa as an off-white solid (0.337 g; 47%), after recrystallization from ethanol, mp 195–206 °C. 1H-NMR (400 MHz, CDCl3) δH 8.05 (s, 1H), 7.90 (td, J = 10.0, 4.0 Hz, 1H), 7.37 (m, 2H), 7.24 (m, 1H), 5.25 (s, 2H), 3.97 (s, 3H). 19F-NMR (376 MHz, CDCl3) δF 19.0 (d, J = 16.9 Hz, 1F), 12.4 (d, J = 20.7 Hz, 1F), 12.2 (dt, J = 21.1, 1.9 Hz, 1F). 13C-NMR (101 MHz, CDCl3) δC 160.9, 143.3, 142.7, 141.0 (d, J 248 Hz), 140.7 (dd, J 251, 16 Hz), 139.8 (d, J 257 Hz), 137.5–137.3 (m), 137.0, 133.8, 127.7, 124.5, 123.5, 120.9, 114.7–114.6 (m), 113.5–113.4 (m), 110.3, 51.9. IR, νmax/cm−1 3400, 1632, 1582, 1531, 1501, 1467, 1427, 1398, 1343, 1300, 1283, 1257, 1212, 1133, 1048, 1000, 960, 892, 873, 847, 762, 743 and 457. HRMS expected for C17H11F3N3O3 362.0747 observed m/z 362.0746 [M + H+]. Elemental Analysis C17H10F3N3O3.0.5H2O requires C 55.15%, H 2.99% and N 11.35%. Found C 55.26%, H 2.81% and N 11.16%.
1-[3-Amino-6-(1H-1,3-benzodiazol-1-yl)-4,5,7-trifluoro-1-benzofuran-2-yl]ethan-1-one 4ab. Hydroxyacetone (0.14 mL, 2.0 mmol) and 4-benzimidazol-1-yltetrafluorobenzonitrile (0.554 g, 1.87 mmol) in DMF gave 4ab as a yellow solid (0.169 g; 24%), purified by column chromatography, mp 138–144 °C. 1H-NMR (500 MHz, CDCl3) δH 8.03 (s, 1H), 7.87 (m, 1H), 7.33 (m, 2H), 7.23 (m, 1H), 5.88 (s, 2H), 2.48 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 18.3 (dd, J = 18.4, 4.5 Hz, 1F), 13.3 (dd, J = 21.1, 18.8 Hz, 1F), 11.9 (dd, J = 21.1, 4.5 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 189.7, 143.2, 142.8, 141.3, 140.4, 139.7, 137.1, 137.1, 136.6, 133.7, 124.5, 123.5, 120.8, 113.3, 110.4, 110.4, 26.2 and (101 MHz, CDCl3) δC 189.7, 143.2, 142.8, 141.3 (ddd, J 250, 14, 4 Hz), 140.5 (dd, J 249, 13 Hz), 139.7 (d, J 256 Hz), 137.2 (dd, J 11, 8 Hz), 136.64, 136.58, 133.7, 124.5, 123.5, 120.8, 114.8 (t, J 11 Hz), 113.3 (d, J 16 Hz), 110.4, 26.2. IR, νmax/cm−1 3584, 3424, 3312, 3203, 3105, 2918, 2849, 1647, 1614, 1554, 1518, 1501, 1464, 1422, 1390, 1361, 1339, 1297, 1279, 1256, 1210, 1175, 1154, 1124, 1096, 1004, 953, 890, 832, 814, 779, 764, 743, 700, 666 and 470. HRMS expected for C17H11F3N3O3 346.0798 observed m/z 346.0797 [M + H+]. Elemental analysis requires C17H10F3N3O2 C 59.14%, H 2.92% and N 12.17%. Found C 59.12%, H 3.07% and N 11.83%.
2-Benzoyl-6-(1H-1,3-benzodiazol-1-yl)-4,5,7-trifluoro-1-benzofuran-3-amine 4ac. Hydroxyacetophenone (0.282 g, 2.07 mmol) and 4-benzimidazol-1-yltetrafluorobenzonitrile (0.524 g, 2.01 mmol) in THF gave 4ac as a red brown solid (0.310 g; 59%) purified by chromatography, mp 165–171 °C. 1H-NMR (500 MHz, CDCl3) δH 8.22 (dt, J = 7.0, 1.5 Hz, 2H), 8.11 (m, 1H), 7.92 (m, 1H), 7.60 (tt, J = 7.0, 1.5 Hz, 1H), 7.53 (tt, J = 7.0, 1.5 Hz, 2H), 7.40 (m, 2H), 7.28 (d, J = 6.5 Hz, 1H), 6.28 (s, 2H). 19F-NMR (471 MHz, CDCl3) δF 18.8 (dd, J = 18.4, 3.3 Hz, 1F), 13.5 (dd, J = 21.2, 18.8 Hz, 1F), 12.3 (dd, J = 20.7, 3.8 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 183.3, 143.2, 141.3, 140.5 139.7, 137.4, 132.9, 129.3, 128.7, 123.7, 120.9, 115.3, 113.0, 110.5. IR, νmax/cm−1 3584, 3350, 3306, 3091, 3059, 2919, 2850, 2218, 1630, 1615, 1600, 1578, 1544, 1501, 1460, 1343, 1322, 1301, 1281, 1259, 1211, 1183, 1154, 1126, 1101, 1042, 1006, 932, 889, 846, 824, 813, 793, 779, 763, 742, 718, 695, 678 and 462. HRMS expected for C22H13N3O2F3 408.0954 observed m/z 408.0947 [M + H+].
(3-Amino-6-(1H-benzo[d]imidazole-1-yl)-4,5,7-trifluorobenzofuran-2-yl)(4-methoxyphenyl)methanone 4ad. Hydroxyketone 3d (0.345 g, 2.08 mmol) and 4-benzimidazolyltetrafluorobenzonitrile 2a (0.382 g, 1.31 mmol) in DMF gave 4ad as a yellow solid (0.118 g, 21%) purified via column chromatography, 1H-NMR (500 MHz, CDCl3) δH 8.28 (dt, J = 9.0, 2.5 Hz, 2H), 8.06 (m, 1H), 7.91 (m, 1H), 7.39 (m, 2H), 7.28 (m, 1H), 7.03 (dt, J = 9.0, 2.0 Hz, 2H), 6.15 (s, 2H), 3.89 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 18.5 (dd, J = 18.4, 3.8 Hz, 1F), 13.1 (dd, J = 20.7, 18.4 Hz, 1F), 12.1 (dd, 21.2, 4.2 Hz, 1F). 13C-NMR (126 MHz, CDCl6) δC {1H, 19F} 181.9, 163.5, 143.2, 142.8, 141.3, 140.6, 139.8, 139.3, 137.2, 136.7, 133.8, 131.7, 129.4, 124.6, 123.6, 120.9, 114.9, 114.0, 113.1, 110.5 55.6. IR νmax/cm−1 3584, 3339, 2921, 2853, 1629, 1600, 1543, 1504, 1457, 1342, 1304, 1255, 1211, 1171, 1105, 1027, 1005, 963, 933, 843, 763 and 745. HRMS expected for C23H15F3N3O3 438.1060 observed m/z 438.1060 [M + H+].
Methyl 3-amino-4,5,7-trifluoro-6-(1H-imidazol-1-yl)-1-benzofuran-2-carboxylate 4ba. Methyl glycolate (0.21 mL, 2.8 mmol) and 4-imidazol-1-yltetrafluorobenzonitrile 2b (0.664 g, 2.8 mmol) in THF (3 mL) gave 4ba as a red brown solid (0.547 g; 64%), mp 175–181 °C. 1H-NMR (500 MHz, CDCl3) δH 7.79 (s, 1H), 7.28 (t, J = 1.5 Hz, 1H), 7.22 (t, J = 1.5 Hz, 1H), 5.22 (s, 2H), 3.97 (m, 3H). 19F-NMR (471 MHz, CDCl3) δF 15.8 (d, J = 17.9 Hz, 1F), 12.1 (t, J = 19.8 Hz, 1F), 9.9 (dt, J = 21.2, 2.4 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 160.9, 140.9, 139.8, 138.6, 138.0, 137.3, 137.0, 130.1, 127.6, 120.5, 116.2, 112.6, 52.0. IR, νmax/cm−1 3584, 3437, 3359, 2956, 2862, 2218, 1690, 1633, 1581, 1535, 1519, 1502, 1459, 1426, 1395, 1346, 1316, 1285, 1258, 1207, 1135, 1083, 1040, 1006, 996, 958, 908, 846, 813, 794, 761, 736 and 655. HRMS expected for C13H9F3N3O3 312.0591 observed m/z 312.0590 [M + H+].
1-[3-Amino-4,5,7-trifluoro-6-(1H-imidazol-1-yl)-1-benzofuran-2-yl]ethan-1-one 4bb. Hydroxyacetone (0.18 mL, 2.6 mmol) and 4-imidazol-1-yltetrafluorobenzonitrile 2b (0.634 g, 2.6 mmol) in THF gave 4bb as a red solid (0.491 g; 63%), mp 108–112 °C. 1H-NMR (500 MHz, CDCl3) δH 7.77 (m, 1H), 7.28 (t, J = 1.0 Hz, 2H), 7.22 (t, J = 1.5 Hz, 1H) 5.74 (s, 2H), 2.51 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 15.3 (dt, J = 18.4, 2.83 Hz, 1F), 12.9 (dd, J = 21.2, 18.4 Hz, 1F), 10.0–9.9 (m, 1F). 13C-NMR (126 MHz, CDCl3) δC 189.8, 141.3 (ddd, J 250, 14, 4), 139.6 (dd, J 247, 14), 138.7 (dd, J 253, 3), 138.0, 137.1 (dd, J 13, 8), 136.7, 136.4 (d, J 3), 130.2, 120.4, 116.6 (t, J 14), 112.5 (dd, J 17, 2), 26.2. IR, νmax/cm−1 3584, 3401, 3306, 3207, 3120, 2918, 2850, 2218, 1647, 1621, 1555, 1519, 1501, 1465, 1361, 1343, 1314, 1271, 1205, 1136, 1108, 1083, 1040, 1005, 952, 906, 876, 829, 812, 734 and 653. HRMS expected for C13H9F3N3O2 296.0641 observed m/z 296.0641 [M + H+].
2-Benzoyl-4,5,7-trifluoro-6-(1H-imidazol-1-yl)-1-benzofuran-3-amine 4bc. 2-Hydroxyacetophenone (0.076 g, 0.56 mmol) and 4-imidazol-1-yltetrafluorobenzonitrile 2b (0.134 g, 0.56 mmol) in THF gave 4bc as an orange solid (0.091 g; 50%), purified by column chromatography, mp 196–204 °C. 1H-NMR (500 MHz, CDCl3) δH 8.21 (dt, J = 7.0, 1.5 Hz, 2H), 7.86 (s, 1H), 7.60 (tt, J = 7.0, 1.5 Hz, 1H), 7.53 (m, 2H) 7.34 (s, 1H), 7.26 (s, 1H), 6.18 (s, 2H). 19F-NMR (471 MHz, CDCl3) δF 15.7 (dd, J = 18.4, 3.8 Hz, 1F), 13.3 (dd, J = 20.7, 18.4 Hz, 1F), 10.1 (dt, J = 21.2, 2.4 Hz, 1F). IR, νmax/cm−1 3584, 3369, 2917, 2849, 1630, 1599, 1577, 1547, 1507, 1462, 1441, 1346, 1317, 1284, 1208, 1183, 1153, 1104, 1079, 1040, 1008, 928, 909, 822, 812 and 714. HRMS expected for C18H11F3N3O2 358.0798 observed m/z 358.0792 [M + H+].
Methyl 3-amino-6-(cyclopropylamino)-4,5,7-trifluoro-1-benzofuran-2-carboxylate 4ca. Methyl glycolate (0.16 mL, 2.0 mmol) and 4-cyclopropylaminotetrafluorobenzonitrile 2c (0.345 g, 1.5 mmol) in DMF gave 4ca as a light brown solid (0.103 g; 22%) purified by column chromatography, 1H-NMR (500 MHz, CDCl3) δH 5.10 (s, 2H), 4.20 (s, 1H), 3.90 (s, 3H), 2.89 (m, 1H), 0.76 (m, 2H), 0.60 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 8.5 (m, 1F), 2.6 (m, 1F), 1.0 (dd, J = 20.3, 3.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {19F} 161.3, 140.7, 138.9, 138.5, 137.1, 133.5, 128.6, 125.2, 125.0, 102.1, 51.5 (q, 1JCH 183 Hz), 27.8 (d, 1JCH 226 Hz), 8.74 (t, 1JCH 202 Hz). IR, νmax/cm−1 3585, 3494–3372, 3091, 3010, 2956, 2919, 2851, 1675, 1624, 1575, 1534, 1509, 1453, 1423, 1384, 1363, 1348, 1300, 1269, 1229, 1183, 1128, 1022, 1049, 965, 953, 927, 847, 832, 819, 797, 759, 734 and 457. HRMS expected for C13H12F3N2O3 301.0795 observed m/z 301.0794 [M + H+]. Elemental analysis expected for C19H18F3N5 C 50.49% H 3.88% N 9.05%, found C 50.79% H 3.51% N 9.01%.
1-[3-Amino-6-(cyclopropylamino)-4,5,7-trifluoro-1-benzofuran-2-yl]ethan-1-one 4cb. Hydroxyacetone (0.14 mL, 2.00 mmol) and 4-cyclopropylaminotetrafluorobenzonitrile 2c (0.516 g, 2.24 mmol) in DMF gave 4cb as an off-white solid (0.086 g; 15%) purified by chromatography, mp 123–129 °C. 1H-NMR (500 MHz, CDCl3) δH 5.71 (s, 2H), 4.34 (s, 1H), 2.93 (m, 1H), 2.44 (s, 3H), 0.80 (m, 2H), 0.62 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 9.3 (dd, J = 20.3, 16.0 Hz, 1F), 2.0 (dt, J = 16.0, 3.3 Hz, 1F), 0.9 (dd, J = 20.3, 3.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {19F} 188.3, 141.1, 139.0, 138.4, 136.8, 135.4133.4, 129.1, 101.8, 27.8 (d, 1JCH 180 Hz), 25.7 (q, 1JCH 127 Hz), 8.79 (t, 1JCH 164 Hz). IR, νmax/cm−1 3584, 3497, 3313, 3016, 1775, 1732, 1661, 1640, 1596, 1555, 1503, 1452, 1392, 1361, 1300, 1269, 1232, 1172, 1130, 1105, 1046, 1017, 946, 931, 848, 833, 799, 765, 739, 693, 675, 656 and 459. HRMS expected for C13H12F3N2O2 285.0845 observed m/z 285.0845 [M + H+]. Elemental analysis expected for C13H11F3N2O2 C 53.61% H 4.12% N 9.62%, found C 53.19% H 3.74% N 9.57%.
2-Benzoyl-N6-cyclopropyl-4,5,7-trifluoro-1-benzofuran-3,6-diamine 4cc. 2-Hydroxyacetophenone (0.273 g, 2.01 mmol) and 4-cyclopropylaminotetrafluorobenzonitrile 2c (0.516 g, 2.24 mmol) in DMF gave 4cc as a brown solid (0.617 g; 89%) purified by chromatography, 1H-NMR (400 MHz, CDCl3) δH 8.18 (m, 2H), 7.52 (m, 3H), 6.15 (m, 2H), 4.38 (m, 1H), 2.94 (m, 1H), 0.84 (m, 2H), 0.65 (m, 2H). 19F-NMR (376 MHz, CDCl3) δF 9.6 (dd, J = 20.3, 16.0 Hz, 1F), 2.2 (d, J = 16.0 Hz, 1F), 0.9 (dd, J = 20.3, 4.2 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 181.7, 142.1, 141.1, 137.4, 137.1, 135.2, 133.4, 132.0, 132.0, 129.2, 128.4, 124.7, 101.4, 27.8 (d, 1JCH 181 Hz), 8.84 (t, 1JCH 164 Hz). IR, νmax/cm−1 3584, 3492, 3346, 3060, 2957, 2850, 2230, 1665, 1618, 1600, 1576, 1554, 1494, 1453, 1438, 1382, 1361, 1350, 1306, 1272, 1230, 1182, 1123, 1074, 1048, 1022, 961, 947, 912, 847, 743, 712, 694, 677 and 458. HRMS expected for C18H14F3N2O2 347.1002 observed m/z 347.1001 [M + H+].
Methyl 3-amino-6-(cyclopentylamino)-4,5,7-trifluoro-1-benzofuran-2-carboxylate 4da. Methyl glycolate (0.16 mL, 2.0 mmol) and 4-cyclopentylaminotetrafluorobenzonitile 2d (0.516 g, 2.0 mmol) in DMF gave 4da as an orange solid (0.145 g, 22%) purified by chromatography, 1H-NMR (500 MHz, CDCl3) δH 5.07 (s, 2H), 4.18 (m, 1H), 3.89 (s, 3H), 3.66 (s, 1H), 1.96 (m, 2H), 1.66 (m, 4H), 1.46 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 8.7 (m, 1F), 2.3 (m, 1F), 0.8 (dq, J = 20.3, 2.4 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 161.3, 140.8, 138.9, 137.4, 134.8, 133.6, 132.5, 124.9, 101.9 57.0, 51.5, 34.4, 23.7. IR, νmax/cm−1 3584, 3379, 2956, 2871, 2225, 1826, 1678, 1624, 1575, 1532, 1454, 1422, 1384, 1344, 1314, 1294, 1263, 1191, 1149, 1130, 995, 974, 950, 896, 878, 819, 760, 733 and 455. HRMS expected for C15H16F3N2O3 329.1108 observed m/z 329.1107 [M + H+].
1-[3-Amino-6-(cyclopentylamino)-4,5,7-trifluoro-1-benzofuran-2-yl]ethan-1-one 4db. Hydroxyacetone (0.14 mL, 2.00 mmol) and 4-cyclopentylaminotetrafluorobenzonitrile 2d (0.501 g, 1.94 mmol) in DMF gave 4db as a brown solid (0.464 g; 76%) purified by chromatography, mp 98–105 °C. 1H-NMR (500 MHz, CDCl3) δH 5.74 (s, 2H), 4.23 (s, 1H, NH), 3.89 (s, 1H), 2.44 (s, 3H), 2.01 (m, 2H), 1.64 (m, 4H), 1.53 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 9.4 (dd, J = 20.7, 16.0 Hz, 1F), 1.6 (d, J = 16.0 Hz, 1F), 0.8 (d, J = 20.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 188.3, 145.0, 140.4, 140.3, 138.4, 136.2, 135.4, 128.6, 101.8, 57.0, 34.5, 25.9, 23.7. IR, νmax/cm−1 3584, 3498, 3429, 3338, 3205, 2959, 2872, 1664, 1638, 1604, 1558, 1510, 1455, 1392, 1380, 1361, 1342, 1311, 1294, 1265, 1173, 1095, 1002, 975, 944, 741 and 460. HRMS expected for C15H16F3N2O2 313.1158 observed m/z 313.1158 [M + H+].
2-Benzoyl-N6-cyclopentyl-4,5,7-trifluoro-1-benzofuran-3,6-diamine 4dc. 2-Hydroxyacetophenone (0.272 g, 2.00 mmol) and 4-cyclopentylaminotetrafluorobenzonitrile 2d (0.202 g, 0.78 mmol) in DMF gave 4dc as a brown solid (0.293 g; 39%) purified by chromatography, mp 105–111 °C. 1H-NMR (500 MHz, CDCl3) δH 8.20 (m, 2H), 7.45 (m, 3H), 6.20 (s, 2H), 4.29 (s, 1H), 3.77 (m, 1H, NH), 2.00 (m, 2H), 1.69 (m, 4H), 1.51 (m, 2H). 19F-NMR (471 MHz, CDCl3) δF 9.8 (dd, J = 20.7, 16.5 Hz, 1F), 1.7 (d, J = 16.0 Hz, 1F), 0.7 (dd, J = 20.3, 1.9 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 181.6, 142.1, 141.2, 139.5, 137.5, 137.3, 135.2, 134.4, 133.4, 131.9, 129.2, 128.4, 107.2, 57.0, 34.5, 29.8, 23.7. IR, νmax/cm−1 3584, 3427, 3340, 3061, 3026, 2960, 2872, 2247, 2223, 1818, 1664, 1620, 1575, 1554, 1494, 1455, 1438, 1380, 1346, 1323, 1313, 1295, 1266, 1183, 1157, 1101, 1073, 1003, 970, 931, 914, 847, 793, 733, 710, 695, 678, 632 and 647. HRMS expected for C20H18F3N2O2 375.1315 observed m/z 375.1314 [M + H+].
Methyl-3-amino-4,5,7-trifluoro-6-(morpholin-4-yl)-1-benzofuran-2-carboxylate 4ea. Methyl glycolate (0.16 mL, 2.0 mmol) and 4-morpholinotetrafluorobenzonitrile 2e (0.522 g, 2.0 mmol) in DMF gave 4ea as an off-white solid (0.375 g; 57%) purified by chromatography, mp 138–143 °C. 1H-NMR (400 MHz, CDCl3) δH 5.12 (s, 2H), 3.95 (m, 3H), 3.81 (m, J = 4.4 Hz, 4H), 3.28 (t, J = 4.0 Hz, 4H). 19F-NMR (376 MHz, CDCl3) δF 12.2 (m, 1F), 9.4 (m, 2F). 13C-NMR (101 MHz, CDCl3) δC 161.2, 141.8, 140.9, 139.5, 138.3, 137.8, 130.0, 125.9, 107.3, 67.5, 51.7, 51.5. IR, νmax/cm−1 3583, 3449, 3380, 2958, 2850, 1682, 1658, 1627, 1573, 1520, 1449, 1424, 1388, 1375, 1340, 1305, 1290, 1264, 1194, 1153, 1115, 1069, 1033, 1000, 990, 958, 923, 864, 833, 808, 797, 760 and 733. HRMS expected for C14H14F3N2O4 331.0900 observed m/z 331.0899 [M + H+]. Elemental analysis C14H13F3N3O4 requires C 50.92%, H 3.97% and N 8.48%, found C 50.84%, H 3.99% and N 8.67%.
1-[3-Amino-4,5,7-trifluoro-6-(morpholin-4-yl)-1-benzofuran-2-yl]ethan-1-one 4eb. Hydroxyacetone (0.14 mL, 2.0 mmol) and 4-morpholinotetrafluorobenzonitrile 2e (0.535 g, 2.00 mmol) in DMF (3 mL) gave 4eb as a brown oil (0.537 g; 85%) purified by chromatography which then solidified, mp 198–204 °C. 1H-NMR (500 MHz, CDCl3) δH 5.69 (s, 2H), 3.83 (m, J = 5.0 Hz, 4H), 3.31 (m, 4H), 2.46 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 11.5 (d, J = 17.0 Hz, 1F), 10.3 (dd, J = 20.3, 16.5 Hz, 1F), 9.3 (d, J = 20.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 189.2, 141.6, 141.4, 139.5, 138.3, 137.4, 135.9, 130.5 107.0, 67.5, 51.6, 26.0. IR, νmax/cm−1 3585, 3429, 3318, 3209, 2965, 2853, 1815, 1731, 1647, 1614, 1545, 1508, 1446, 1385, 1359, 1334, 1304, 1287, 1264, 1215, 1174, 1153, 1116, 1068, 998, 947, 923, 864, 818, 807, 734 and 712. HRMS expected for C14H14F3N2O3 315.0951 observed m/z 315.0951 [M + H+].
2-Benzoyl-4,5,7-trifluoro-6-(morpholin-4-yl)-1-benzofuran-3-amine 4ec. 2-Hydroxyacetophenone (0.273 g, 2.0 mmol) and 4-morpholinetetrafluorobenzonitrile 2e (0.355 g, 1.4 mmol) in DMF gave as a yellow solid 4ec (0.421 g, 56%) purified by chromatography, mp 109–113 °C. 1H-NMR (400 MHz, CDCl3) δH 8.21 (m, 2H), 7.54 (m, 3H), 6.14 (s, 2H), 3.82 (t, J = 4.8 Hz, 4H), 3.29 (m, 4H). 19F-NMR (376 MHz, CDCl3) δF 11.8 (d, J = 16.5 Hz, 1F), 10.6 (dd, J = 20.3, 16.9 Hz, 1F), 9.4 (d, J = 20.3 Hz, 1F). 13C-NMR (101 MHz, CDCl3) δC 182.5, 141.5, 141.4, 139.4, 138.7, 137.2, 135.2, 132.3, 132.3, 130.8, 129.2, 128.5, 106.6, 67.5, 51.6. IR, νmax/cm−1 3434, 3325, 2960–2853, 2758, 2692, 2230, 1823, 1721, 1657, 1626, 1600, 1536, 1493, 1450, 1440, 1386, 1374, 1341, 1307, 1290, 1264, 1181, 1153, 1115, 1069, 1029, 1000, 926, 861, 747, 694, 678 and 463. HRMS expected for C19H16F3N2O3 377.1108 observed m/z 377.1106 [M + H+].
(3-Amino-4,5,7-trifluoro-6-morpholinobenzofuran-2-yl)(4-methoxyphenyl)methanone 4ed. 2-Hydroxy-1-(4-methoxyphenyl)ethan-1-one (0.326 g, 1.96 mmol) and 4-morpholinotetrafluorobenzonitrile 2e (0.570 g, 2.19 mmol) in DMF gave 4ed as a yellow solid (0.316 g, 39%) purified by chromatography eluting with ethyl acetate, mp 159–164 °C. 1H-NMR (500 MHz, CDCl3) δH 8.24 (dt, J = 9.0, 3.0 Hz, 2H), 6.99 (dt, J = 9.0, 2.5 Hz, 2H), 6.07 (s, 2H), 3.88 (s, 3H), 3.36 (t, J = 3.5 Hz, 4H), 3.32 (t, J = 3.5 Hz, 4H). 19F-NMR (471 MHz, CDCl3) δF 11.8 (d, J = 16.5 Hz, 1F), 10.1 (dd, J = 20.7, 17.0 Hz, 1F), 9.4 (d, J = 20.3 Hz, 1F). 13C-NMR (126 MHz, CDCl6) δC {1H, 19F} 181.2, 163.0, 141.6, 141.3, 140.4, 139.4, 138.4, 135.7, 131.5, 130.5, 129.9, 113.8, 106.8, 55.5, 51.6, 46.3. IR, νmax/cm−1 3401, 2929, 2799, 1661, 1623, 1602, 1569, 1540, 1512, 1488, 1456, 1417, 1391, 1372, 1301, 1286, 1255, 1175, 1139, 112, 1029, 1002, 925, 908, 843, 762, 732, 560, 507 and 471. GC-MS for C20H18F3N2O4 found m/z 406.20 (M+).
Methyl 3-amino-4,5,7-trifluoro-6-(4-methylpiperazin-1-yl)-1-benzofuran-2-carboxylate 4fa. Methyl glycolate (0.15 mL, 2.0 mmol) and 4-(4-methylpiperazin-1-yl)tetrafluorobenzonitrile 2f (0.545 g, 1.99 mmol) in DMF gave 4fa as a brown solid (0.153 g; 22%) crystallised from ethanol, mp 138–145 °C. 1H-NMR (500 MHz, CDCl3) δH 5.11 (s, 2H), 3.92 (m, 3H), 3.32 (t, J = 4.5 Hz, 4H), 2.55 (m, 4H), 2.30 (m, 3H). 19F-NMR (471 MHz, CDCl3) δF 12.5 (d, J = 12.7 Hz, 1F), 9.5 (d, J = 20.3 Hz, 1F), 9.2 (m, 1F). 13C-NMR (126 MHz, CDCl3) δC 161.3, 141.8, 140.9, 139.5, 138.4, 137.9, 125.9, 130.4, 107.0, 51.7, 51.0, 46.3, 46.3. IR, νmax/cm−1 3584, 3468, 3368, 3189, 2943, 2888, 2849, 2801, 2748, 1682, 1626, 1572, 1520, 1452, 1425, 1391, 1373, 1341, 1301, 1285, 1258, 1230, 1194, 1171, 1132, 1076, 1051, 1035, 1004, 991, 957, 936, 802, 779, 760, 735, 699, 638 and 455. HRMS expected for C15H17F3N3O3 344.1217 observed m/z 344.1209 [M + H+]. Elemental analysis expected for C15H16F3N3O3.0.5H2O C 51.40% H 4.79% N 11.99%, found C 51.84% H 4.69% N 11.94%.
1-[3-Amino-4,5,7-trifluoro-6-(4-methylpierazin-1-yl)-1-benzofuran-2-yl]ethan-1-one 4fb. Methyl glycolate (0.15 mL, 2.0 mmol) and 4-(4-methylpiperazin-1-yl)tetrafluorobenzonitrile 2f (0.543 g, 1.99 mmol) in DMF gave 4fb as a brown solid (0.477 g; 73%) crystallised from ethanol, mp 128–135 °C. 1H-NMR (500 MHz, CDCl3) δH 5.69 (s, 2H, NH2), 3.33 (t, J = 4.5 Hz, 4H), 2.55 (t, J = 4.0 Hz, 4H), 2.43 (m, 3H), 2.34 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 11.6 (d, J = 16.5 Hz, 1F), 10.0 (dd, J = 20.7, 17.0 Hz, 1F), 9.4 (d, J = 20.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {1H, 19F} 189.1, 141.5, 141.4, 139.5, 138.4, 137.5, 135.8, 130.8, 106.6, 55.5, 51.0, 46.3, 26.0. IR, νmax/cm−1 3583, 3414, 2938, 2888, 2850, 2803, 2747, 2694, 2219, 1863, 1841, 1787, 1643, 1545, 1507, 1450, 1391, 1372, 1361, 1333, 1300, 1284, 1259, 1230, 1171, 1154, 1139, 1076, 1052, 999, 950, 833, 810, 781, 732 and 466. HRMS expected for C15H17F3N3O2 328.1267 observed m/z 328.1258 [M + H+]. Elemental analysis C15H16F3N3O2 requires C 55.05%, H 4.93% N 12.84, found C 55.24%, H 5.14% N 12.66%.
2-Benzoyl-4,5,7-trifluoro-6-(4-methylpiperazin-1-yl)-1-benzofuran-3-amine 4fc. 2-Hyroxyacetophenone (0.293 g, 2.15 mmol) and 4-(4-methylpiperazin-1-yl)tetrafluorobenzonitrile 2f (0.566 g, 2.07 mmol) in THF gave 4fc as a yellow-orange solid (0.065 g; 12%) purified by chromatography, mp 138–144 °C. 1H-NMR (500 MHz, CDCl3) δH 8.20 (dd, J = 8.5, 1.0 Hz, 2H), 7.55 (tt, J = 7.0, 1.5 Hz, 1H), 7.50 (tt, J = 7.5, 1.5 Hz, 2H), 6.13 (s, 2H), 3.43 (m, 4H), 2.70 (m, 4H), 2.44 (m, 3H). 19F-NMR (471 MHz, CDCl3) δF 12.1 (d, J = 16.0 Hz, 1F), 10.6 (t, J = 19.3 Hz, 1F), 9.5 (d, J = 20.7 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 182.5, 141.5, 141.4, 140.9, 139.3, 138.7, 137.2, 135.7, 132.3, 130.8, 129.2, 128.5, 106.4, 55.3, 50.6, 45.9. IR, νmax/cm−1 3488, 3323, 3193, 3059, 2936, 2888, 2849, 2799, 1658, 1625, 1601, 1577, 1536, 1494, 1452, 1440, 1391, 1373, 1341, 1285, 1261, 1231, 1182, 1168, 1155, 1139, 1075, 1029, 1002, 934, 926, 736, 717, 696, 678, 631, 616, 564 and 458. HRMS expected for C20H19F3N3O2 390.1424 observed m/z 390.1416 [M + H+]. Elemental analysis C20H18F3N3O2.H2O requires C 58.97%, H 4.91% N 10.32%, found C 58.56%, H 4.43% N 10.17%.
(3-Amino-4,5,7-trifluoro-6-(4-methylpiperazin-1-yl)benzofuran-2-yl)(4-methoxyphenyl)methanone 4fd. 2-Hydroxy-1-(4-methoxyphenyl)ethan-1-one 3d (0.347 g, 2.09 mmol) and 4-(4-methylpiperazin-1-yl)tetrafluorobenzonitrile 2f (0.580 g, 2.12 mmol) in DMF gave 4fd as a yellow solid (0.157 g, 19%) purified by chromatography eluting with ethyl acetate, mp 162–168 °C. 1H-NMR (500 MHz, CDCl3) δH 8.22 (d, J = 9.0 Hz, 2H), 6.97 (d, J = 9.0 Hz, 2H), 6.07 (s, 2H), 3.88 (s, 3H), 3.35 (m, 4H), 2.56 (m, 4H), 2.36 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 11.8 (d, J = 16.5 Hz, 1F), 10.1 (t, J = 19.8 Hz, 1F), 9.3 (d, J = 20.3 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC {19F, 1H} 181.0, 162.8, 141.5, 141.3, 140.5, 139.4, 138.5, 135.7, 131.5, 130.9, 130.0, 113.8, 106.4, 55.5 (2xC, O[C with combining low line]H3 and MeN[C with combining low line]H2), 51.1, 46.3. IR, νmax/cm−1 3386, 3288, 2979, 2840, 1659, 1600, 1573, 1536, 1509, 1492, 1447, 1439, 1418, 1385, 1366, 1347, 1302, 1290, 1263, 1250, 1176, 1166, 1033, 1001, 927, 853, 762, 684, 619, 523 and 469. HRMS expected for C21H21F3N3O3 420.1530 observed m/z 420.1528 [M + H+].
Methyl 3-amino-6-(4-bromophenoxy)-4,5,7-trifluoro-1-benzofuran-2-carboxylate 4ga. Methyl glycolate (0.15 mL, 2.00 mmol) and 4-(4-bromophenoxy)tetrafluorobenzonitrile 2g (0.704 g, 2.03 mmol) in THF gave 4ga as a red brown solid (0.580 g; 70%) crystallised from ethanol, mp 74–79 °C. 1H-NMR (500 MHz, CDCl3) δH 7.41 (dt, J = 9.0, 3.5 Hz, 2H), 6.85 (dt, J = 9.5, 3.5 Hz, 2H), 5.19 (s, 2H), 3.96 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 11.1 (t, J = 18.8 Hz, 1F), 9.0 (d, J = 17.0 Hz, 1F), 5.2 (dd, J = 20.7, 1.9 Hz, 1F). 13C-NMR (126 MHz, CDCl6) δC {1H, 19F} 161.1, 156.6, 140.9, 140.1, 138.6, 137.5, 136.7, 133.0, 132.8, 117.2, 116.2, 109.9, 107.6, 51.9. IR, νmax/cm−1 3490, 3370, 2954, 1690, 1627, 1579, 1524, 1483, 1456, 1343, 1309, 1269, 1208, 1168, 1130, 1069, 1008, 950, 825, 761 and 737. HRMS expected for C16H10BrF3NO4 415.9740 observed m/z 415.9740 [M + H+].
2-Benzoyl-6-(4-bromophenoxy)-4,5,7-trifluoro-1-benzofuran-3-amine 4gc. 2-Hydroxyacetophenone (0.272 g, 2.00 mmol) and 4-(4-bromophenoxy)tetrafluorobenzonitrile (0.792 g, 2.29 mmol) in DMF gave 4gc as a bright yellow solid (0.705 g; 77%) purified by chromatography and preparative TLC (eluting with light petroleum-ethyl acetate), mp 135–142 °C. 1H-NMR (400 MHz, CDCl3) δH 8.20 (tt, J = 8.4, 2.0 Hz, 2H), 7.58 (tt, J = 7.2, 1.8 Hz, 1H), 7.51 (tt, J = 6.8, 1.6 Hz, 2H), 7.43 (dt, J = 9.2, 3.2 Hz, 2H), 6.88 (dt, J = 9.2, 3.2 Hz, 2H), 6.17 (s, 2H). 19F-NMR (376 MHz, CDCl3) δF 12.3 (dd, J = 20.7, 17.3 Hz, 1F), 9.8 (dd, J = 17.3, 1.5 Hz, 1F), 5.3 (m, J = 20.7, 1.5 Hz, 1F). 13C-NMR (101 MHz, CDCl3) δC 183.0, 156.6, 141.3, 140.2, 140.0, 138.8, 137.7, 136.8, 136.2, 133.8, 132.8, 132.6, 129.2, 128.6, 117.5, 116.4, 109.3. IR, νmax/cm−1 3416, 3308, 2924, 1625, 1574, 1540, 1482, 1461, 1437, 1385, 1345, 1313, 1267, 1211, 1186, 1168, 1153, 1099, 1071, 1008, 916, 824, 735, 704, 683, 608, 549 and 493. HRMS expected for C21H12BrF3NO3 461.9947 observed m/z 461.9942 [M + H+].
(3-Amino-6-(4-bromophenoxy)-4,5,7-trifluorobenzofuran-2-yl)(4-methoxyphenyl)methanone 4gd. 2-Hydroxy-1-(4-methoxyphenyl)ethan-1-one 3d (0.377 g, 2.27 mmol) and 4-(4-bromophenoxy)tetrafluorobenzonitrile (0.690 g, 1.99 mmol) in DMF gave 4gd as a yellow solid (0.219 g, 22%) purified by chromatography eluting with light petroleum-ethyl acetate, mp 192–198 °C. 1H-NMR (500 MHz, CDCl3) δH 8.25 (dt, J = 10.0, 3.0 Hz, 2H), 7.43 (dt, J = 9.0, 2.0 Hz, 2H), 7.00 (dt, J = 9.0, 2.0 Hz, 2H), 6.89 (dt, J = 9.0, 2.0 Hz, 2H), 6.10 (s, 2H), 3.89 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 12.0 (dd, J = 20.7, 17.4 Hz, 1F), 9.5 (dd, J = 17.4, 1.4 Hz, 1F), 5.0 (dd, J = 20.7, 1.4 Hz, 1F). 13C-NMR (126 MHz, CDCl6) δC {1H, 19F} 181.6, 163.2, 156.7, 141.3, 140.0, 139.7, 138.7, 137.5, 136.3, 133.5, 132.8, 131.6, 129.6, 117.4, 116.3, 113.9, 109.4, 55.5. IR νmax/cm−1 3494, 3338, 2931, 2840, 1632, 1603, 1541, 1512, 1483, 1449, 1384, 1348, 1309, 1260, 1216, 1169, 1098, 1072, 1026, 1008, 920, 882, 846, 821, 760, 697, 631, 604, 582, 565 and 551.
Methyl 3-amino-4,5,7-trifluoro-6-(4-nitrophenoxy)-1-benzofuran-2-carboxylate 4ha. Methyl glycolate (0.15 mL, 2.00 mmol) and 4-(4-nitrophenoxy)tetrafluorobenzonitrile (0.656 g, 2.10 mmol) in DMF gave 4ha as a light brown solid (0.222 g; 29%) purified by trituration with ether, mp 91–96 °C. 1H-NMR (500 MHz, CDCl3) δH 8.24 (dt, J = 9.5, 3.0 Hz, 2H), 7.06 (dt, J = 9.5, 3.0 Hz, 2H), 5.21 (s, 2H), 3.96 (m, 3H). 19F-NMR (471 MHz, CDCl3) δF 11.8 (t, J = 20.3 Hz, 1F), 10.5 (d, J = 17.0 Hz, 1F), 5.3 (dd, J = 20.7, 2.8 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 161.7, 161.1, 143.8, 141.0, 139.7, 138.5, 137.5, 137.2, 131.8, 127.2, 126.2, 115.7, 110.6, 52.0. IR, νmax/cm−1 3490, 3377, 2929, 2854, 1691, 1615, 1590, 1521, 1490, 1457, 1345, 1308, 1222, 1168, 1113, 1010, 949, 863 and 749. HRMS expected for C16H10F3N2O6 383.0485 observed m/z 383.0477 [M + H+].
2-Benzoyl-4,5,7-trifluoro-6-(4-nitrophenoxy)-1-benzofuran-3-one 4hc. 2-Hydroxyacetophenone (0.269 g, 1.97 mmol) and 4-(4-nitrophenoxy)tetrafluorobenzonitrile (0.666 g, 2.13 mmol) in DMF gave 4hc as a light brown solid (0.235 g; 27%) purified by trituration with ether, mp 121–127 °C. 1H-NMR (500 MHz, CDCl3) δH 8.25 (tt, J = 9.5, 3.5 Hz, 2H), 8.18 (m, 2H), 7.58 (tt, J = 7.0, 1.5 Hz, 1H), 7.52 (tt, J = 7.5, 1.5 Hz, 2H), 7.09 (tt, J = 9.0, 3.5 Hz, 2H), 6.18 (s, 2H). 19F-NMR (471 MHz, CDCl3) δF 12.9 (dd, J = 20.7, 17.4 Hz, 1F), 10.3 (dd, J = 17.4, 2.8 Hz, 1F), 5.4 (dd, J = 20.7, 2.8 Hz, 1F). 13C-NMR (126 MHz, CDCl3) δC 183.1, 161.7, 143.9, 141.4, 139.7, 138.6, 137.6, 136.7, 136.4, 132.7, 132.6, 129.2, 128.6, 126.2, 126.1, 115.8, 110.1. IR, νmax/cm−1 3056, 2934, 2853, 1617, 1592, 1523, 1490, 1456, 1346, 1265, 1222, 1167, 1113, 1011, 862, 738, 704 and 464. HRMS expected for C21H12F3N2O5 429.0693 observed m/z 429.0694 [M + H+]. Elemental analysis requires C21H11F3N2O5 C 58.89%, H 2.59% and N 6.54%, found C 58.54%, H 2.84% and N 6.42%.
(3-Amino-4,5,7-trifluoro-6-(4-nitrophenoxy)benzofuran-2-yl)(4-methoxyphenyl)methanone 4hd. 2-Hydroxy-1-(4-methoxyphenyl)ethan-1-one 3d (0.335 g, 2.02 mmol) and 4-(4-nitrophenoxy)tetrafluorobenzonitrile (0.683 g, 2.19 mmol) in DMF gave an off-white solid 4hd (0.138 g, 15%) purified by chromatography eluting with light petroleum-ethyl acetate, mp 172–180 °C. 1H-NMR (500 MHz, CDCl3) δH 8.28–8.23 (m, 4H), 7.12–7.08 (m, 2H), 7.03–7.00 (m, 2H), 6.12 (bs, 2H), 3.89 (s, 3H). 19F-NMR (471 MHz, CDCl3) δF 12.7 (dd, J = 20.7, 17.4 Hz, 1F), 10.1 (dd, J = 17.0, 2.4 Hz, 1F), 5.2 (dd, J = 20.7, 2.8 Hz, 1F). 13C-NMR (126 MHz, CDCl6) δC {1H, 19F} 181.7, 163.4, 161.7, 143.9, 141.4, 139.6, 139.5, 138.5, 137.4, 136.5, 132.3, 131.5, 129.5, 126.2, 115.8, 113.9, 110.3, 55.6. IR, νmax/cm−1 3485, 3361, 2930, 2850, 1633, 1601, 1574, 1543, 1513, 1489, 1452, 1418, 1346, 1308, 1257, 1217, 1176, 1160, 1112, 1007, 918, 864, 851, 761, 695, 679, 645, 632, 570, 544 and 471. HRMS expected for C22H14F3N2O6 459.0798 observed m/z 459.0800 [M + H+].

Investigations of carbonyl group cleavage

4-Benzimidazol-1-yltetrafluorobenzene 8a was identified from cleavage of 4-benzimidazol-1-yltetrafluorobenzaldehyde in the presence of sodium methoxide.
4-Benzimidazol-1-yltetrafluorobenzene 8a. 1H-NMR (400 MHz, CDCl3) δH 8.05 (s, 1H), 7.91–7.87 (m, 1H), 7.41–7.37 (m, 2H), 7.29–7.25 (m, 1H), 6.97 (m, 1H).

19F-NMR (376 MHz, CDCl3) δF 25.8–25.6 (m, 2F), 16.5–16.3 (m, 2F).

IR, νmax/cm−1 3429, 2926, 2854, 2119, 1646, 1614, 1517, 1452, 1411, 1305, 1289, 1266, 1253, 1207, 1180, 1152, 1136, 1086, 1008, 991, 946, 889, 839, 782, 764, 742, 714 and 702.

LC-MS m/z 266.80.

HRMS calculated for C13H7F4N2 267.0540, observed m/z 267.0540 [M + H]+.

4-(2,3,5,6-Tetrafluorophenyl)morpholine 8e. Attempted reaction of 4-morpholinotetrafluorobenzaldehyde with methyl glycolate and DBU led to formation of an off-white solid 8e in low yield.

1H-NMR δH (400 MHz, CDCl3) δH 6.69 (tt, J = 9.9, 7.1 Hz, 1H, H-1), 3.84–3.75 (m, 4H, H-2′/H-6′), 3.28–3.22 (m, 4H, H-3′/H-5′).

19F-NMR δF (376 MHz, CDCl3) δF 29.0–28.8 (2F, m), 18.2–18.0 (2F, m).

13C-NMR δC (101 MHz, CDCl3), 147.6 (dtd, J = 245, 12.5, 3.75 Hz), 145.6 (dtd, J = 245, 12.5, 3.75 Hz), 143.3 (ddt, J = 244, 14, 4 Hz) 141.4 (ddt, J = 244, 14, 4 Hz) 130.6 (t, J = 11 Hz), 99.7–98.6 (m), 67.4 (s, CH2, C-3’/C-5′), 51.2 (s, CH2, C-2′/C-6′).

IR, νmax/cm−1 3048 (C–H, aromatic), 2966–2863 (C–H, saturated), 1641–1450 (C[double bond, length as m-dash]C, aromatic), 1378 (C–F), 1184 (C–N), 1137 (C–O).

LC-MS 236.15 [M + H]+.

HRMS expected for C10H10F4NO 236.0676, observed m/z 236.0676 [M + H]+.

Reaction of 4-morpholinotetrafluorobenzaldehyde 6ea with sodium methoxide in deuterated methanol – D-8e

Sodium (0.004 g, 0.2 mmol, 1.1 eq.) was dissolved in CD3OD (1 mL). Then 4-morpholinotetrafluorobenzaldehyde 6ea (0.050 g, 0.18 mmol, 1 eq.) was added and dissolved. The solution was heated under reflux for 2 h. Water (15 mL) was poured into the reaction mixture which was then extracted with ethyl acetate (3 × 15 mL). The organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue (0.026 g) was taken up in CD3OCD3 and shown by NMR to be a mixture containing:
D-8e. NMR δH (400 MHz, CD3OCD3) 6.69 (tt, J = 9.9, 7.1 Hz, integrates at <0.05 H, 95% deuterium incorporation).

IR νmax/cm−1 3584, 2960, 2893, 2855, 2225, 2132, 2073, 1693, 1629, 1472, 1389, 1375, 1342, 1298, 1264, 1148, 1113, 1069, 1047, 1034, 1047, 1008, 927, 895, 859 and 843.

HRMS expected for C10H9DF4NO 237.0756, observed m/z 237.0750 [M + H]+. Deuterated product D-8e.

HRMS expected for C10H10F4NO 236.0693, observed m/z 236.0716 [M + H]+. Non-deuterated product 8e.

Reaction of pentafluorobenzaldehyde or pentafluoroacetophenone with sodium methoxide

Pentafluorobenzaldehyde or pentafluoroacetophenone (2 mmol) was dissolved in MeOH (3 mL) and NaOMe (10 mmol) was added at −10 °C and the solution was stirred and then heated under reflux for 15 h, during the course of the reaction the solution turned yellow. Water (10 mL) was then poured into the reaction mixture and extracted with CDCl3 (3 × 5 mL). The combined organic layers were dried over MgSO4 and filtered and submitted for NMR spectroscopy which showed mixtures from which the following were identified.

From pentafluorobenzaldehyde:

1,2,4,5-Tetrafluoro-3-methoxybenzene (minor). 1H-NMR (400 MHz, CDCl3) δH 7.57–7.53 (m, 1H, CH), 4.01 (t, J = 1.6 Hz, 3H, OMe).

19F-NMR (376 MHz, CDCl3) δF 21.6–21.4 (m, 1F), 4.2–4.0 (m, 1F).

IR, νmax/cm−1 3467, 1623, 1509, 1469, 1378, 1285, 1196, 1125, 990, 896, 823, 759 and 562.

2,3,5-Trifluoro-4,6-dimethoxybenzaldehyde 14a. IR, νmax/cm−1 3584, 3391, 2951, 2852, 1696, 1649, 1611, 1493, 1479, 1430, 1400, 1361, 1292, 1268, 1203, 1141, 1039, 1003, 903, 811, 739, 703 and 622.

HRMS calculated for C9H8F3O3 221.0420, observed m/z 221.0422 [M + H]+.

From reaction with pentafluoroacetophenone:

2,3,5-Trifluoro-4,6-dimethoxyacetophenone 14b. HRMS calculated for C10H10F3O3 235.0577, observed m/z 235.0576 [M + H]+.

From both reactions:

1,2,4-Trifluoro-3,5-dimethoxybenzene 15. 1H-NMR (500 MHz, CDCl3) δH 6.74–6.63 (m, 1H), 3.98 (t, J = 2.0 Hz, 3H), 3.93 (t, J = 1.0 Hz, 3H).

19F-NMR (471 MHz, CDCl3) δF 21.6–21.4 (m, 1F), 10.9 (s, 1F), 3.8–3.6 (m, 1F).

IR, νmax/cm−1 3584, 3400, 3003, 2950, 2844, 2586, 2420, 2345, 2308, 2043, 1986, 1943, 1893, 1711, 1616, 1515, 1476, 1424, 1380, 1352, 1295, 1263, 1206, 1179, 1130, 1099, 1045, 1003, 942, 896, 853, 774, 743, 700 and 600.

Conclusions

Twenty-seven aminobenzofurans, as potential drug leads were accessed via tandem SNAr-cyclocondensation reaction of substituted perfluorobenzonitriles and α-hydroxycarbonyl compounds using DBU as base. The new compounds were characterized by IR spectroscopy, NMR spectroscopy, HRMS, and elemental analysis. The structure of (3-amino-4,5,7-trifluoro-6-morpholinobenzofuran-2-yl)(4-methoxyphenyl)methanone was determined by single crystal X-ray diffraction analysis.

Data availability

The data supporting this article have been included as part of the ESI. Crystallographic data for compound 4ed has been deposited at the CCDC under 231984 at https://www.ccdc.cam.ac.uk/.

Conflicts of interest

The authors declare no conflicts of interest.

Acknowledgements

We thank the British Society of Antimicrobial Chemotherapy for funding (PhD studentship to HT) and the EPSRC X-ray Crystallography Centre at Southampton University.14 We are grateful to Mr J. Alastair Daley, Dr Emily Gale and Mrs Pauline King for technical support and Loughborough University for facilities. We thanks Mr Wilson Kou and Miss Christy Lee for experimental assistance.

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Footnote

Electronic supplementary information (ESI) available. CCDC 2312984. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d5ra02024g

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