Humberto A.
Rodríguez
a,
Daniel A.
Cruz
a,
Juan I.
Padrón
*a and
Pablo
Lorenzo-Luis
*b
aInstituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas (IPNA-CSIC), 38206, La Laguna, Tenerife, Islas Canarias, Spain. E-mail: jipadron@ipna.csic.es
bÁrea de Química Inorgánica, Departamento de Química, Universidad de La Laguna, C/Astrofísico Francisco Sánchez 3, 38071 La Laguna, Spain. E-mail: plorenzo@ull.es
First published on 26th June 2025
This work proposes a graphical analysis based on a new chiral picolinate of the (S)-BINOL derivative, designated as the reference ligand L1. The models establish the influence of temperature on L1 and identify a new coordination polymer (CP) [Cu2(pic)2(OTf)2(H2O)2(Py)]n·2n(Py) 1·2(Py), where [Hpic = pyridine 2-carboxylic acid and pic = picolinate], as the predominant structure through the pathway in dioxane at room temperature or the known complex [Cu(pic)2·2H2O] 2·(H2O)2 at reflux in dioxane. This work provides a detailed description of the preparation method, the structural characteristics of the new CP containing the zinc complex [Zn2(pic-Hpic)3]n·n(OTf) 3·(OTf), and density functional theory (DFT) calculations. Coordination polymer 1 2(Py) exhibits unusual magnetic properties at low temperature and high magnetic fields. This behavior may be associated with the presence of superparamagnetic particles or the influence of crystal field effects. In contrast, its origin is unlikely to be associated with common ferromagnetic impurities such as Fe, Co or Ni due to its characteristic high Curie temperature.
The {(±)-BINOL} ligand and its derivatives have been extensively employed and investigated for the synthesis of novel compounds in various fields, including circularly polarized luminescence (CPL), enantiomeric separation, biological transmembrane transport, and asymmetric catalysis.8
A more specific case involves its use to develop chiral Brønsted acids, particularly in combination with phosphoric acid to generate BINOL derivatives. In such a case, a chiral pocket containing both the acidic proton and the basic phosphoryl oxygen is created. This structure has been used as a building block together with various metal centers to achieve covalent organic frameworks (COFs).9 Usually, due to its hindered chiral pockets (Scheme 1b), it binds poorly to M-π-Lewis metals (MII = Fe, Co and Cu). However, it binds well through the phosphoric acid oxygens, alternating two metal atoms with two phosphinate groups in the case of M-π-Lewis metals (MII = Rh, Pd; MIII = Yb). In our previous work on a new copper chiral polymer (CCP), which exhibited a paddle wheel structure, the difficulty of obtaining other complexes of this metal series (Sc–Zn) was observed.10 This result prompted us to explore other possibilities while maintaining this type of chiral scaffold containing aromatic rings.11
It is important to emphasize that in the design of new ligands, we must consider the reactivity of the metal, the binding modes or the stereoselectivity of the metal complexation. These processes can be affected by steric hindrance, when a molecular fragment blocks the approach of the reagent to the substrate.3 In addition, there are self-reactivity processes that give rise to aggregates of the ligand in solution and facilitate crystallization mechanisms with the metal present.12 Although it may seem that a part of the reaction is out of control, this situation allows us to thoroughly explore multiple synthetic conditions while looking for stable complexes.
Various synthetic methodologies for picolinates have been reported in the literature. The chelating features of Hpic have attracted much research attention due to its biological interest. However, to the best of our knowledge, those authors have not provided additional information to support this affirmation.13–22 Furthermore, no comparative study has explored the influence of {(±)-BINOL} in the chelating behavior of the anionic pic and their role as a ligand.
Herein, we present new insights into the (S)-BINOL-derived chiral picolinate as a benchmark L1 ligand, which allows for two new coordination polymers (CPs) [Cu2(pic)2(OTf)2(H2O)2(Py)]n·2n(Py) 1·2(Py) and [Zn2(pic-Hpic)3]n·n(OTf) 3·(OTf). Both have κ2N,O groups and are octacoordinated. However, one is unprecedented, exhibiting μ-κ:O′ mode alternating pentacoordinate units (Scheme 3). Complex [Cu(pic)2·2H2O] 2·(H2O)2 has been previously reported,20 and it has been included here for comparative purposes (Scheme 4). The transformation L1 → 1·2(Py) suggests that the benchmark ligand L1 undergoes a process of hydrolysis, followed by a decarboxylation.23–25 To further verify these transition pathways, different studies were carried out, including density functional theory (DFT) calculations. Finally, the thermal stabilities for the complexes and magnetic properties of 1·2(Py) are systematically discussed.
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Scheme 2 Straightforward preparation of new binaphthyl chiral scaffolds based on (S)-BINOL and/or picolinates. |
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Scheme 3 Coordination modes of Hpic to ion metals: adapted from ref. 16. Modes type c and e are discussed in this work (blue atoms). |
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Scheme 4 Benchmark L1 ligand and its relationship with the findings of the new coordination picolinate 1·2(Py) and 3·(OTf) complexes. Complex 2·(H2O)2 has been included for comparative purposes. |
Whereas the first transition pathway requires the presence of water and involves a process of hydrolysis followed by a decarboxylation, the second one does not display any relationships except for the temperature factor. In fact, at room temperature, the yield of 1·2(Py) is due to the interaction of traces of water molecules absorbed by the dioxane used as solvent.
In contrast, under reflux conditions with dioxane, the reflux temperature favoured the coordination of Cu–N as a traditional dative bond, yielding complex 2·(H2O)2.20 These effects should not be the main reasons for the observed trend. Upon thorough examination of the products of the hydrolysis and decarboxylation, it was found that the binaphthyl framework detaches from the chiral scaffold, enabling the pyridine moiety to separate from the picolinate group and coordinate with the copper ion (Scheme 5, paths I, II). In 2009, Goossen et al.25 reported on a photodecarboxylation reaction with aromatic carboxylic acids, where copper is highly beneficial in the presence of bipyridine ligands or aromatic amines as solvents. We believe that our process is additionally favored by the presence of triflate ions (OTf = −OSO2CF3) in the solution media. In fact, the access of water molecules to interact with complex units, leading to their dissolution, is known to be less problematic for −OTf than, e.g., BF4− salts.26 To understand this behavior, an alternative synthesis of 1·2(Py) was carried out from 2·(H2O)2 at room temperature. However, 2·(H2O)2 does not revert into complex 1·2(Py) (Scheme 5, path III).
To the best of our knowledge, no other experimental evidence has been found to support different pathways. In fact, the structure of 1·2(Py) has been unequivocally confirmed by single-crystal X ray diffraction, confirming the coordination of pyridine, water and −OTf moieties to copper instead of the binaphthyl framework (vide infra).
In order to address the above questions, [Zn2(pic-Hpic)3]n·n(OTf) 3·(OTf) was synthesized through L1, where Cu(OTf)2 was replaced by M(OTf)2 (MII = Fe, Ni, Zn) in dioxane at room temperature. The composition of 3·(OTf) was clearly supported by the determination of its crystal structure by single crystal X-ray diffraction (vide infra). A scope of this synthetic process with the key results can be found in Scheme 4 and ESI.† Therefore, as we had already anticipated, when iron, nickel or zinc replace copper, the decarboxylation process in water decreases in comparison to hydrolysis. In fact, for iron and nickel, colorless crystals that were suitable for X-ray diffraction were obtained. However, they unfortunately corresponded to (S)-BINOL.
Therefore, we conclude that the hydrolysis and decarboxylation pathways should not be viewed as independent processes, but rather as ones that benefit from an effective catalytic partner. It is also worth noting that water is far from an innocent solvent: it can interact with the reactants, products and reaction intermediates.8,27 In fact, water acts as a nucleophile and as a hydrogen donor for up to two bridges, and also serves as an acceptor of the hydrogen atom in the interaction with other water molecules. We cannot ignore that the acidity of the hydroxyl groups from BINOL show a polarization effect under a natural inductive effect (–I), allowing for the oxonium species H3O+. However, this formula is a simplified description of the situation of the H+ ion in water, where the cation is believed to associate via inter-hydrogen bonds with more than one water molecule, giving rise to a complex species of formula [H(H2O)n]+. Likewise, the way that aromatic ligands arrange themselves around metal ions can be influenced by the hydrophobic effects caused by water.28 These intermolecular interactions could provide an additional stabilization with OTf ions, allowing for hydrolysis and the later decarboxylation process. A similar approach was proposed by G. Dunn and H. Thimm,23 who reported that intramolecular hydrogen bonding is not an important feature of picolinic acid decarboxylation in water. This fact apparently does not contradict our last supposition; although at the moment, everything points towards the important role played by BINOL.
To confirm this hypothesis, 1·2(Py) and 2·(H2O)2 were alternatively synthesized (Scheme 6) from the starting reagents (S)-BINOL and Hpic (BP), and through ligand L2 (Scheme 2) under the same experimental conditions described in Scheme 5. As expected, 1·2(Py) was found with the lowest yield (22%, viaL2). Meanwhile, with BP, it showed a significant yield (54%) which was still lower than that for benchmark L1 ligand (66%, Scheme 5, path I). The progressive decrease in yield for 1·2(Py) denotes the strong negative effect of non-covalent interactions on the hydrolysis and its later influence under the decarboxylation process. In fact, the attempt to isolate 1·2(Py) viaL3 (Scheme 2) was unsuccessful. In its case, only 2·(H2O)2 was obtained viaHpic with insufficient results (15% yield, Scheme 6, path VII).
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Scheme 6 Proposed pathways BP → 1·(Py) and L2 → 1·2(Py), and their relationship with the finding of the picolinate complex 1·2(Py). |
It is important to stress that the reaction of L4 (Scheme 2) and between Hpic with phenol (PP, ESI†) in dioxane to elucidate the transition pathway did not give rise to the formation of 1·2(Py). All of our attempts to obtain good quality monocrystals for X-ray diffraction experiments were unsuccessful. The powder diffraction spectra obtained from the final products of both reactions were not consistent with the formation of the 1·2(Py) complex (Fig. S5 and S6, ESI†).
Additionally, DFT calculations were carried out to gain further insight into the formation process of 1·2(Py) at the PCM(1,4-dioxane)-ωB97XD/def2-TZVP//PCM(1,4-dioxane)-ωB97XD/def2-SVP level (Scheme 7). Different transition states associated with the decarboxylation of picolinic acid were considered. The most favorable pathway (TS1, ΔΔG‡ = 38.8 kcal mol−1) evolves from an intermediate (INT1) in which the picolinate coordinates in a κ2N,O mode (Scheme 3), leading to the generation of an aryl-cuprate. It was observed that copper activates the carbonyl group and subsequently facilitates the cleavage of the C–C bond to generate CO2. Pyridine is then formed via a protonolysis process, as proposed by J. Goossen et al.25 The next closest system (TS1′) involves a κ,O coordination mode of the picolinate with copper, being slightly less favored (ΔΔG‡ = 42.5 kcal mol−1), followed by TS1′′ (ΔΔG‡ = 44.0 kcal mol−1), where the possibility of losing one triflate unit was considered. Finally, to demonstrate that the presence of copper is essential for the process, TS1′′′ was calculated with ΔΔG‡ = 46.9 kcal mol−1, a value that is significantly higher than the others. To the best of our knowledge, the decarboxylation process is complex, and a more favorable transition state leading to the formation of the pyridine unit cannot be ruled out. Alternative pathways are currently being explored with new DFT calculations.
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Scheme 7 Possible transition states associated with the decarboxylation process of Hpic (energy values in kcal mol−1). *Indicates the unit of (S)-BINOL. |
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Fig. 2 Molecular structure of 1·2(Py): the N3A-pyridine solvent molecule has been omitted for clarity (Fig. S5a, ESI†). Schematic of a mostly octahedral structure around Cu1 (OctaDist-program: ζ, Σ, and Θ) and a square-pyramid structure around Cu2 (Addison parameter τ5). |
Complex [Zn2(pic-Hpic)3]n·n(OTf) 3·(OTf) crystallizes in the trigonal space group P (Table S6, ESI†), and its crystal unit cell contains a racemic mixture of Λ- and Δ-configured Zn1 centers within the achiral polymeric cationic units [Zn2(pic-Hpic)3]n+, with n(OTf) ions acting as solvent molecules for each complex. An intermolecular hydrogen bond O–H⋯O link in the complex molecule is formed from the hydroxyl moiety (H–O2), but not to the carbonyl oxygen (O1), which interacts with the metal ion: [D–H⋯A/Å: D⋯A, H⋯A]: #O2–H2⋯O2& 2.459(2), 1.229(1) [(&) = 1 + x − y, x, −z] (Fig. 3). A residual electron density near this oxygen atom that is positioned equidistant between both molecules supports this hydrogen-bonding interaction (Fig. S5b, ESI†). Due to donor coordination by the carbonyl group, the structure is displaced toward an octahedral coordination polyhedron around the metal, as the carbonyl oxygen atoms position themselves at axial or equatorial sites, whereas the picolinate nitrogen atom is located at the positions [Zn1–O1 2.134(2), Zn1–N1 2.122(2) Å].
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Fig. 3 Molecular structure of 3·(OTf). Schematic of a mostly octahedral structure around Zn1 (OctaDist-program: ζ, Σ, and Θ). |
The Hpic torsion angles Zn1*–O1–C1#–O2 and O2–C1&–O1-Zn1! lie at approximately ±179.5(2)° [(*) = x, y, 1 + z;(!) = 1 − x, 1 − y, −z]. The metal does not deviate significantly from the mean equatorial plane (Zn1: −0.007 Å), while the values of the stretching ζ and angular Σ are 0.04 Å and 77.7°, respectively. Similar to what was observed in 1·2(Py), the slightly distorted octahedral coordination polyhedron29 around the metal (Θ = 243.8°) comprises the κ2N,O coordination mode [bite angle of 77.5(5)°]. The degree of coordination is consistent with earlier work involving nitrogen and oxygen donor action: [Zn(2-H)(2)X], (X = Br, Cl), [Zn(2-H)2(H2O)2],22 and [Zn(C6H4NO2)2(H2O)2],31 showing that the respective donor–acceptor Zn–O and Zn–N bond lengths are comparable to that for 3·(OTf) (mean values 2.100 and 2.110 Å, respectively). In contrast with that previous reported, 3·(OTf) is the first structurally characterized example of a zinc(II)-based picolinate complex where the carboxyl hydrogen atom, H2, of one zinc-picolinate molecule is involved via hydrogen bonding with one of the hydroxyl oxygen atoms, O2, of an adjacent cinc-picolinate molecule. The carbonyl oxygen atom O1 is involved in donor action with the metal ion. In fact, to our knowledge, a metal–organic framework exhibiting this similar network has been previously reported by W. Ng et al.,32 for an iron picolinate formulated as [FeII(C6H4.5NO2)3]0.5+.
Additionally, the magnetic characterization of 1·2(Py) was performed, revealing a linear dependence of magnetization (M) with respect to the applied field (H) (Fig. S9, ESI†), which is indicative of paramagnetic behaviour. This is observed despite the intrinsic contributions from the diamagnetic components surrounding the Cu2+ atoms. M–H measurements at low temperature (1.8 K) showed a trend toward magnetization saturation above 5 T, resulting in a paramagnetic moment close to 2 Bohr magnetons at 7 T. This phenomenon, which is absent at 300 K (Fig. 5), may be associated with superparamagnetic particles or the influence of crystal field effects. While the results are clear, complementary techniques such as EPR spectroscopy or AC susceptibility could be employed to clarify these findings. The effective experimental paramagnetic moment was determined from M vs. T measurements at 300 K (Fig. S12, ESI†) using the Curie–Weiss law, yielding a value of 2.06 ± 0.15μB f.u.−1 This is lower than the theoretical value (2.45μB), which is consistent with the spin-only approximation. Conversely, the paramagnetic Curie–Weiss temperature, obtained from fittings up to 300 K (Θ between +4 and +26 K), shows a value close to 0 K. This is consistent with a predominantly paramagnetic behavior. This magnetic behaviour is well-defined in the literature.18
Footnote |
† Electronic supplementary information (ESI) available: A full characterisation of L1, 1·2(Py) and 3·(OTf). CCDC 2409918, 2409920 and 2409919. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d5nj01654a |
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