Michael A. Kipp*a,
Laura F. Piccirillo
a and
Daniel Petersb
aDivision of Earth and Climate Sciences, Nicholas School of the Environment, Duke University, Durham, NC 27708, USA. E-mail: michael.kipp@duke.edu
bNu Instruments Ltd, Wrexham LL13 9XS, UK
First published on 19th August 2025
Selenium is a redox-sensitive trace element that is both an essential nutrient and toxin. Studying selenium cycling in nature is of great interest to the fields of environmental health, geomicrobiology, chemical oceanography and volcanology. The six stable isotopes of selenium are fractionated during redox reactions, leaving fingerprints of redox conditions and micronutrient dynamics in modern and ancient environments. However, the study of selenium isotope variability in nature is plagued by analytical difficulties, including its low natural abundance and the prevalence of argon-based interferences in plasma-based mass spectrometers. Here we present a new approach to selenium isotopic analysis using a collision–reaction cell multiple collector inductively coupled plasma mass spectrometer. By using a He–N2 gas mixture, we can achieve near-complete removal of argon dimers from the beam, allowing precise analysis of all selenium isotopes. This new method enables greater analytical precision per nanogram of selenium analyzed and is also less sensitive to concentration mismatch between samples and standards. Future work can leverage CRC-equipped mass spectrometers to study subtle isotopic effects in low-selenium reservoirs.
Studying the cycling of Se in surface environments is important for tracking contaminant transport.5,6 Furthermore, the proportions of Se in various valence states can provide information about environmental redox conditions in present or past environments.7–9 Stable isotope ratios provide a useful means of tracking these transitions between redox states, as Se has six stable isotopes (Table 1) that experience mass-dependent fractionation during redox reactions.10–13 Over the past few decades, several studies have explored the potential of Se isotope geochemistry to track environmental pollution,14–16 paleo-redox conditions,17–23 hydrothermal systems24–26 and solar system formation.27,28
Detector | L6 | L5 | L4 | L2 | Ax | H2 | H4 | H5 | H6 | H7 | H8 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Mass (amu) | 73 | 74 | 75 | 76 | 77 | 78 | 79 | 80 | 81 | 82 | 83 | 84 |
Selenium | 74Se (0.86%) | 76Se (9.23%) | 77Se (7.60%) | 78Se (23.7%) | 80Se (49.8%) | 82Se (8.82%) | ||||||
Se hydrides | 74SeH | 76SeH | 77SeH | 78SeH | 80SeH | 82SeH | ||||||
Argon | 36Ar38Ar | 36Ar40Ar; 38Ar38Ar | 38Ar40Ar | 40Ar40Ar | ||||||||
Ar hydrides | 36Ar40ArH; 38Ar38ArH | 38Ar40ArH | 40Ar40ArH | |||||||||
Germanium | 73Ge (7.76%) | 74Ge (36.5%) | 76Ge (7.8%) | |||||||||
Ge hydrides | 73GeH | 74GeH | 76GeH | |||||||||
Arsenic | 75As (100%) | |||||||||||
As hydrides | 75AsH | |||||||||||
Krypton | 78Kr (0.4%) | 80Kr (2.3%) | 82Kr (11.6%) | 83Kr (11.5%) | 84Kr (57.0%) | |||||||
Kr hydrides | 78KrH | 80KrH | 82KrH | 83KrH |
Despite its promise as a biogeochemical tracer, analysis of Se isotopes faces multiple hurdles. First, Se is present at low levels in geological (∼60 ng g−1 in crust29,30) and aqueous (≤160 ng L−1 in ocean31) samples. Second, Se is volatile, and losses during sample preparation can induce substantial isotopic fractionation.32 Third, and most importantly for this study, Se analysis via multiple collector inductively coupled plasma mass spectrometry (MC-ICP-MS) is plagued by isobaric interference from argon dimers (74ArAr, 76ArAr, 78ArAr, 80ArAr; Table 1). This typically means that 80Se, the most abundant isotope (49.8%), cannot be resolved from 80ArAr (mass resolution of >20000 would be required) or adequately corrected, and thus half of the potential Se signal cannot be analyzed. Interferences on 78Se, 76Se and 74Se can also increase analytical uncertainty if not properly corrected.33,34
Collision–reaction cell (CRC) equipped MC-ICP-MS instruments have the potential to eliminate Ar-based interferences, enabling more sensitive and precise Se isotopic analysis. By introducing gases to the ion flight path that collide or react with ArAr, the abundance of ArAr relative to an analyte of interest (in this case, Se) can be reduced by orders of magnitude. While some early work on Se isotopes used a CRC-MC-ICP-MS (Micromass Isoprobe), most applications35,36 used Ar in the cell and thus did not explore ArAr signal reduction via collision or reactions with other gases. Furthermore, the Isoprobe never became widespread and most MC-ICP-MS method development over the past few decades has used non-CRC approaches. In the last few years, a new generation of CRC-MC-ICP-MS instrumentation has emerged (Nu Sapphire and Thermo Neoma), raising the possibility of again exploring CRC-MC-ICP-MS analysis of Se isotopes. If successful, this approach could potentially improve the precision of 74Se, 76Se, 78Se and 80Se analyses while simultaneously reducing sample requirements and enabling monitoring of all isotope pairs for thorough assessment of mass-dependent behavior. Given the scarcity of Se in most natural samples, these would be important analytical advances.
Here we describe protocols for Se isotope analysis using a Nu Sapphire CRC-MC-ICP-MS. We compare protocols with and without the collision–reaction cell, employing published interference correction schemes.33,34 We find that the Sapphire is capable of high-precision Se isotope analyses in both the high-energy (non-CRC) and low-energy (CRC) modes. Analyses employing the CRC can match the external reproducibility of non-CRC analyses using ∼40% less Se. This will help to reduce Se requirements for sample-limited analyses, and also allows a broader survey of all Se isotopes for precise exploration of mass-independent isotopic effects.
A geostandard, USGS Cody Shale (SCo-1; Split #7, Position #4), was prepared for isotopic analysis to allow comparison to published work. Sample powders (∼0.5 g) were digested in a 1:
1
:
1 combination of concentrated HF, HNO3 and HClO4 at 130 °C for two days. Digests were dried to incipient dryness, and additional HClO4 was added to ensure complete digestion of organic matter. Final digests were dried to incipient dryness, reconstituted in 2 mL of 5.5 M HCl, capped and refluxed at 100 °C for one hour to allow reduction of SeVI to SeIV. After cooling, the solutions were diluted to 0.5 M HCl.
Selenium was purified from digests using thiol-silica resin.37 Columns (6 mL bed volume, 250 μL resin volume; Phenomenex) were cleaned with 0.5 M HCl before loading samples in 0.5 M HCl and subsequently washing the matrix through the column with additional 0.5 M HCl. Selenium was eluted from the columns by conversion from SeIV to SeVI using 15 M HNO3. The purified Se fraction was dried to a ∼500 μL drop and 1.5 mL of 11 M HCl was added to form aqua regia. This solution was dried at 55 °C to a ∼250 μL drop, reconstituted in 1 mL 6 M HCl, capped and refluxed at 100 °C for one hour to convert SeVI to SeIV. The solution was then diluted to 0.5 M HCl for isotopic analysis. Procedural blanks were <1 ng Se and column yields were consistently >90% for solution and rock standards.
The HG uses sodium borohydride (NaBH4, 1 wt% in 0.01 M NaOH) as a reductant and HCl (here 0.5 M) as the run acid, facilitating the reaction:
3NaBH4 + 3H2O + 3HCl + 2H2SeO3 → 3NaCl + 2H2Se + 3H3BO3 + 6H2 | (1) |
Salt accumulation in the HG required regular (∼daily) rinsing to prevent blockage of gas transmission to the mass spectrometer, as noted by ref. 34 using the same HG model. The HG peristaltic pump was operated at 20–40 rpm (typically 25), which corresponded to uptake rates of ∼467 μL min−1 for sample solution, ∼237 μL min−1 for NaBH4 solution, and ∼117 μL min−1 for additional 0.5 M HCl. A single analysis (80 s uptake time followed by 50 cycles of 4 s each), therefore consumed ∼2.2 mL of sample solution.
![]() | ||
Fig. 1 Ion flight path in Nu Sapphire MC-ICP-MS. Only argon dimer interferences are shown; additional isobaric interferences that are not removed by the CRC are shown in Table 1. |
High-energy (non-CRC) | Low-energy (CRC) | |
---|---|---|
Plasma | ||
Coolant gas | 13.0 L min−1 | 13.0 L min−1 |
Auxiliary gas | 0.8 L min−1 | 0.8 L min−1 |
Nebulizer pressure | 4.0 psi | 4.0 psi |
RF power | 1300 W | 1300 W |
Acceleration | 6000 V | 4000 V |
Extraction | 3500 V | 2000 V |
![]() |
||
Collision cell | ||
He | N/A | 0–1 mL min−1 |
H2 | N/A | 0 mL min−1 |
N2 | N/A | 1–2 mL min−1 |
![]() |
||
Hydride generator | ||
Sample uptake | 467 μL min−1 | 467 μL min−1 |
NaBH4 uptake | 237 μL min−1 | 237 μL min−1 |
HCl uptake | 117 μL min−1 | 117 μL min−1 |
Pump speed | 25 rpm | 25 rpm |
![]() | (2) |
Isotope ratios were corrected using both standard-sample bracketing and isotope dilution. A new 74Se–77Se double spike (DS) solution was prepared using pure 74Se and 77Se solutions (IsoFlex). The optimal DS composition and DS:
sample ratio were determined following Rudge et al.41 and using the code from Klaver and Coath42 (Fig. 3A). The optimal values (Fig. 3A) are similar to those determined using the Double Spike Toolbox41 (77Se/74Se = 0.93; DS/(DS + sample) = 0.37), but differ slightly because following Klaver and Coath,42 we allowed for non-fixed sample voltage, as has been noted by others43,44 to be important for sample-limited measurements. The DS composition was calibrated via analyses of mixtures with NIST SRM 3149 and validated with analyses of mixtures with MH-495, a pure Se solution used in prior work18,32,45 (Fig. 3B). We note that while other Se double spikes have been explored that enable similar or even slightly superior analytical precision,32,34,46 the choice to spike the least abundant Se isotopes (74Se and 77Se) allows the greatest improvement in counting statistics while not saturating detectors (as pointed out by ref. 43). Thus, the 74Se–77Se spike is best suited for precise isotopic analysis of low-Se materials. Furthermore, while spiking on top of major interferences can be advantageous,43 in this case the major interferent (80ArAr) occurs on the major Se isotope, leaving little room for spiking before detector saturation.
![]() | ||
Fig. 3 Double spike (A) composition and (B) calibration. Theoretical precision limits were calculated for a74Se–77Se spike at various spiking ratios using the approach of Klaver and Coath.42 Across the range of sample intensities expected for typical analyses (1–50 V total Se signal), the optimal spiking ratio is 30–40% (grey shaded area). Our 74Se–77Se spike was calibrated using NIST SRM 3149 and validated via analyses of MH-495, which yielded values consistent with published data for spiking ratios from 20% to 80%. |
We monitored masses 73 to 83 using faraday cups coupled to amplifiers with 1011 Ω resistors, where a single measurement consisted of 50 cycles lasting 4 s each of integration time. Drawing on prior work,33,34 Se beam intensities were corrected for isobaric interferences in the manner outlined below. Following correction for isobaric interferences, delta values were calculated using both standard-sample bracketing (SSB) and double spike (DS) deconvolution. Since the system is over-constrained – four isotopic ratios (five when including 80Se), three unknowns – a least-squares regression was used to find the optimal solution to the double spike equations.
82,80,78Kr = 83Krmeas(82,80,78Kr/83Kr)NA | (3) |
These inferred Kr signals (typically ≤0.5 mV for 82Kr) were subtracted from the sample and standard signals. We note that this Kr contribution is not corrected for instrumental mass bias, but due to the small magnitude of the correction the impact on isotopic ratios is negligible.
80ArAr = 80Semeas − 82Secorr(80Se/82Se)NAeβ·log(m80/m82) | (4) |
β = ((82Secorr/78Secorr)/(82Se/78Se)NA)/log(m82/m78) | (5) |
We note that inaccuracies in mass bias estimation will not significantly impact these corrections, as even using unfractionated natural isotopic abundance has a negligible (<0.01‰) impact on corrected isotopic ratios in most cases. This 80ArAr signal was then used to calculate 76ArAr and 78ArAr contributions using natural isotopic abundances (76ArAr/80ArAr = 0.006636; 78ArAr/80ArAr = 0.001257):
78,76ArAr = 80ArAr(78,76ArAr/80ArAr)NA | (6) |
Mass bias correction was not applied to Ar dimer abundances, since the impact would be even smaller than the already negligible correction on the 80Se signal estimation. The calculated 76ArAr (80–100 mV) and 78ArAr (15–20 mV) contributions were then subtracted from the observed mass 76 and 78 signals (contributions from 74ArAr were <0.07 mV and thus ignored). For non-CRC analyses, the 80Se signal was not used for SSB or DS delta value calculations. For CRC analyses, 80Se was included, but no ArAr corrections were applied due to near-complete removal of ArAr interferences and adequate correction from OPZ subtraction.
SeH rate = 82SeHmeas/82Secorr | (7) |
After subtracting the 83Kr contribution from the OPZ, a 82SeH signal of 1–4 mV was typically observed, corresponding to 82SeH/82Se hydride rates of <10−3 on average. The determined hydride rate was used to calculate and subtract contributions from 77SeH and 76SeH on masses 78 and 77, respectively:
77,76SeH = 77,76Secorr (SeH rate) | (8) |
ArArH rate = (80ArArHmeas − 80Secorr (SeH rate))/80ArAr | (9) |
This rate was used to determine the 76ArArH contribution to subtract from the mass 77 signal:
76ArArH = 76ArAr (ArArH rate) | (10) |
76,74Ge = 73Gemeas (76,74Ge/73Ge)NA eβ·log(m76,74/m73) | (11) |
We also estimated and subtracted the 73GeH contribution to 74Se using the SeH rate:
73GeH = 73Gemeas (SeH rate) | (12) |
75AsH = (75Asmeas − 74SeH − 74GeH) (SeH rate) | (13) |
82Secorr = 82Semeas − 82Kr | (14) |
80Secorr = 80Semeas − 80ArAr − 80Kr | (15) |
78Secorr = 78Semeas − 78ArAr − 78Kr − 77SeH | (16) |
77Secorr = 77Semeas − 76SeH − 76ArArH | (17) |
76Secorr = 76Semeas − 76ArAr − 76Ge − 75AsH | (18) |
74Secorr = 74Semeas − 74Ge − 73GeH | (19) |
For analyses employing the low-energy (CRC) path, we tested two different cell gas combinations. First, following recent method development using a Nu Sapphire40 and based on prior work,39 we tested a He–N2 mixture. Using N2 as a reaction gas is known to reduce the signal from ArAr+ ions via a ligand exchange reaction:39,48
ArAr+ + N2 → ArN2+ + Ar | (20) |
We found that when using a He–N2 cell gas mixture (or N2 alone), with optimal tuning in the low-energy (CRC) path we could match the same sensitivity as non-CRC analyses, typically by minimizing He flow and using an N2 flow rate of 0.8 to 1.0 mL min−1 (Fig. 4). Under these conditions, on-peak zero measurements of 0.5 M HCl gave a signal of 10–20 mV on the low-mass shoulder of mass 80 (Fig. 2B) and an 80Se/78Se ratio of ∼2. Given that this nearly matches the natural 80Se/78Se ratio (∼2.1) and is much lower than the 80ArAr/78ArAr ratio (∼800), we infer that there is a negligible contribution from ArAr+ ions to any measured beam intensities when using N2 in the CRC.
![]() | ||
Fig. 4 Selenium signal as function of (A) N2 and (B) He cell gases. Signal intensity is maximized with moderate (0.8 to 1.0 mL min−1) N2 flow and minimal He flow into the collision reaction cell. |
We also tested He–H2 mixtures. While similar Se signal sensitivity could be achieved as with He–N2 mixtures, the SeH rate increased to as high as 3%, more than an order of magnitude greater than with He–N2 (<0.1%). As a result, even when employing SeH corrections, the precision of isotope ratio measurements worsened (Fig. 5). Thus, we opted to use He–N2 rather than He–H2 in our CRC analyses.
We next consider the analytical precision of isotope ratio measurements. To assess the controls on internal precision, we followed prior work41–43,49–52 in calculating the theoretical contributions to measurement uncertainty from Johnson–Nyquist noise (σJohnson) and counting statistics (σcounting):
![]() | (21) |
![]() | (22) |
neff = nanb (na + nb) | (23) |
The internal precision of an isotope ratio measurement will be the sum of error contributions from Johnson–Nyquist noise, counting statistics, and any further contributions from unknown sources (σunknown):
![]() | (24) |
We consider the internal precision as a function of Se introduced to the mass spectrometer, converting from neff assuming an uptake time of 467 μL min−1, analysis time of 280 s, and signal transmission of 560 V per ppm. We found that in both CRC and non-CRC measurement modes, individual analyses show a trend of improving internal precision with greater Se introduction that follows the Johnson–Nyquist noise and counting statistics theoretical lines, with an inferred σunknown contribution of ∼0.01‰ (Fig. 5). This agrees with similar assessments made for other elements analyzed via MC-ICP-MS,50–52 and confirms that under optimal tuning, measurement precision can be maximized in both CRC and non-CRC modes.
In addition to maximizing internal precision, we considered the reproducibility of replicate analyses. We did so using error-normalized deviates (END's),50–52 with END calculated:
![]() | (25) |
Finally, we assessed the accuracy and precision of our data using three-isotope plots for data reduced only via standard-sample bracketing (i.e., without double spike deconvolution). Our analyses fall within certified/published values18,32,35,46 for the NIST standard and MH-495 (Fig. 3B), as well as SCo-1 (δ82/76Se = −0.10 ± 0.24‰, 2σ, n = 6) (Fig. 7). In non-CRC mode, mass-dependent fractionation (MDF) is observed for δ82/78Se vs. δ82/76Se, but not for δ80/78Se due to the imprecise correction for 80ArAr interference (Fig. 7A). In contrast, CRC analyses show MDF patterns for both isotope pairs, reflecting effective 80ArAr removal (Fig. 7B).
We first considered mismatch in HCl molarity between samples and bracketing standards. Typical analyses used 0.5 M HCl for sample and standard solutions, as well as the supplemental HCl in the HG. In these tests, the additional HCl of the HG was held at 0.5 M HCl and only the “sample” (NIST 3149) molarity was changed, to mimic sample dilution with incorrect acid concentration. In both the high- and low-energy paths, mismatch to 0.3 or 0.7 M HCl had a negligible impact on measured isotopic ratios (Fig. 8). In high-energy mode, mismatch to 0.1 or 0.9 M HCl was also negligible, but in low-energy mode these led to larger isotopic deviations for SSB data, while DS-reduced data remained unaffected (Fig. 8). While this reveals a greater sensitivity of CRC than non-CRC analyses to molarity matching, subtle differences between batches of 0.5 M HCl are unlikely to lead to isotopic artifacts in either measurement mode. We note that molarity matching sensitivity becomes greater when the SeH correction is not implemented, highlighting the importance of this step.
![]() | ||
Fig. 8 Molarity matching tests for (A) non-CRC and (B) CRC analyses. Molarity mismatch of samples and standards causes only minor artifacts for SSB data and none for DS data. |
We next considered samples that are mismatched in Se concentration relative to bracketing standards. We explored this using NIST 3149 solutions that were 70% to 130% concentrated relative to bracketing 40 ppb NIST 3149 solutions. We observed a strong intensity-mismatch effect for SSB data in both high- and low-energy modes. In high-energy (non-CRC) mode, an effect of +0.05‰ per −3% intensity mismatch is observed for δ82/78Se values determined by standard-sample bracketing (SSB, Fig. 9A and B). Given that our achievable external precision is <0.05‰, this means that a few percent concentration mismatch could have detectable effects. Careful, iterative dilution is therefore imperative to make high-precision Se isotopic analyses using SSB data reduction only for non-CRC analyses. However, we note a few qualifications to this statement.
First, the magnitude – and even sign – of intensity mismatch effect depends on the isobaric interference corrections that are implemented. The SeH correction is particularly sensitive to intensity mismatch (Fig. 9A). Additionally, the magnitude of intensity mismatch effect varies between sessions, due to both tuning parameters and absolute measurement intensity. For all of these reasons, great care must be taken to produce high-precision Se isotope ratios via SSB data reduction. However, DS deconvolution successfully corrects for much of this effect (Fig. 9B), meaning that analyses only targeting mass-dependent fractionation patterns that implement DS data reduction are less susceptible to these analytical artifacts.
In contrast, we observe a much weaker intensity mismatch effect for CRC analyses (Fig. 9C), particularly when unnecessary isobaric interference corrections are eliminated. Due to the near-complete removal of ArAr dimers, ArAr and ArArH corrections can be omitted without consequence for measurement accuracy or precision. Thus, for CRC analyses, DS-reduced data show a weak intensity mismatch effect, meaning matching of standard and sample signals to within 10% is adequate to minimize analytical artifacts.
Last, we considered matrix contamination from Ge. While we employ Ge interference corrections as described in Section 2.5.5, these corrections are subject to uncertainty as the Ge signal becomes larger in magnitude. We find that in both non-CRC and CRC modes, Ge contamination up to Ge/Se = 1 does not significantly impact δ82/78Se values measured via SSB (Fig. 10), as expected since there are no isobaric interferences from Ge on mass 78 or 82 (which is one of the reasons for reporting this ratio). Furthermore, DS-reduced data are robust up to Ge/Se = 0.1 and show only small (∼0.1‰) artifacts at Ge/Se = 1 (Fig. 10). This suggests that Ge correction via 73Ge monitoring and mass bias inference from Se isotope fractionation is adequate to capture most realistic Ge contributions to the mass 74 and 76 signals that would arise from incomplete Ge removal during Se purification.
As for sample requirements, we present here a brief assessment of the improvement in analytical precision when using the CRC. As noted above, with optimal tuning, maximum signal intensity can roughly be matched between non-CRC and CRC analyses of the same solutions. Thus, internal precision (i.e., individual isotopic analyses), which is dictated by counting statistics and scales with the square root of effective ions counted (eqn (22)), is roughly equivalent for analysis of a given isotope ratio in non-CRC vs. CRC mode, using standard-sample bracketing.
We can also consider the addition of the 80Se signal to the double spike deconvolution in CRC analyses. In a simplified case where each ratio used in the deconvolution contributes equally, the addition of 80Se would bring the system from 4 to 5 equations, meaning internal error would scale from to
, implying an improvement of ∼11%. Considering that 80Se is the most naturally abundant Se isotope and thus has greater signal intensity, this improvement of precision would be ∼16% assuming uniform relative standard errors on all isotope ratios. However, these simplified scenarios over-estimate the real improvement in internal precision because (i) measurement precision on individual isotope ratios does not scale directly with counts in all cases (some are “cleaner” than others due to lack of interferences), and (ii) all ratios are highly correlated, meaning the addition of 80Se adds less constraint to the system than if it were an independent estimate. Using measured internal errors on individual isotope ratios, we infer that the inclusion of 80Se in the deconvolution improves internal precision by no more than 3%.
Despite the lack of change in internal precision, significant improvement in the reproducibility of replicate analyses is observed in CRC mode (Fig. 6). A decrease of σEND from 1.83 to 1.29 between non-CRC and CRC modes implies a ∼40% improvement in external reproducibility. Put another way, this means that CRC analyses can match the precision of non-CRC analyses using roughly half as much Se. We note that the magnitude of improvement in precision varies across sessions, but in almost all instances yields tens of percent reduction in sample requirement for CRC analyses. We attribute this improvement to the removal of Ar-based interferences, which are not perfectly corrected in non-CRC measurements.
Finally, we note that in addition to superior analytical precision, CRC analyses are less sensitive to concentration mismatch (Fig. 9). This means that imperfections in dilutions and evaporation during analysis will have smaller impacts on CRC data. Altogether, this points to CRC analysis as an attractive choice for Se isotope measurements due to the achievable precision and resilience to analytical conditions.
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