Open Access Article
Jinyi
Liu
a,
An T.
Ta†
a,
R.
Seaton Ullberg‡
a,
Jean Wilfried
Hounfodji
b,
Michael
Badawi
b,
Hans-Conrad
zur Loye
c and
Simon R.
Phillpot
*a
aDepartment of Materials Science and Engineering, University of Florida, Gainesville FL 32611, USA. E-mail: phillpot@ufl.edu
bLaboratoire Lorrain de Chimie Moléculaire L2CM, Université de Lorraine, CNRS, F-54000 Nancy, France
cCenter for Hierarchical Waste Form Materials and Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
First published on 31st October 2025
We employ density functional theory calculations to investigate the energetics and diffusion mechanisms of alkali metal ions (Na+, K+, Rb+, and Cs+) within the analcime framework. While Na+ preferentially adsorbs at the center of the 8-member ring, DFT calculations show that larger ions, such as Cs+, occupy the center of the cage due to steric constraints. The computed exchange energies indicate that exchange of Na+ by Cs+ is thermodynamically favorable. Migration energy barriers, determined using the climbing image nudged elastic band method, show that Na+ is mobile in analcime, diffusing through both 6-member rings and 8-member rings, with a low migration energy of about 0.3 eV; Cs+ diffusion primarily occurs through the 8-member ring pathway, with a high energy barrier of 1.35 eV, whereas the 6-member ring pathway presents even significantly higher barriers (∼3.37 eV), making it less accessible. These findings suggest that Cs+/Na+ exchange in analcime is thermodynamically feasible but kinetically hindered. Our work provides a theoretical foundation for the application of analcime in nuclear waste management and highlights the need for further experimental validation.
Currently, the main methods for removing Cs+ ions from aqueous solutions are chemical precipitation, membrane separation, and ion exchange processes. The chemical precipitation method6 involves addition of chemical reagents to the contaminated solution to form insoluble cesium compounds; however, precise pH adjustment is required to ensure the effectiveness of the precipitation reaction. The generation of a large amount of Cs-containing sludge through salt precipitation significantly increases the difficulty of incorporation into an immobilizing matrix, such as cementitious or glass materials. The membrane separation method7 utilizes the selective permeability of semipermeable membranes to separate Cs+ ions from the solution. Common membrane technologies include reverse osmosis, nanofiltration, and electrodialysis. While these methods demonstrate good efficiency in removing radioactive 137Cs, they have high equipment and operating costs, and the membranes are susceptible to contamination, requiring regular maintenance.8 The ion exchange method employs ion-exchange materials to exchange Cs+ ions in solution with ions on a solid matrix, thereby achieving removal. Among these materials, zeolites9,10—naturally occurring aluminosilicate minerals—exhibit high selectivity for Cs+ ions due to their well-defined porous structures and large specific surface areas. Furthermore, the chemical stability and mechanical strength of zeolites make them highly effective in practical applications, rendering them ideal candidates for treating radioactive wastewater. In the removal of Cs+ ions from aqueous solutions, natural zeolites such as clinoptilolite have demonstrated significant adsorption capacity. Indeed, clinoptilolite9 is widely used in radioactive wastewater treatment due to its high ion-exchange capacity and selectivity for Cs+ ions. Additionally, synthetic zeolites such as Zeolite A4 and Rho-type zeolites10 exhibit excellent Cs+ removal performance in high-salinity environments. Recent studies have also employed density functional theory (DFT) calculations to uncover the cation exchange and adsorption mechanisms in zeolite materials, such as Faujasite-type structures, providing valuable insights that complement experimental observations.11,12
Analcime, a naturally occurring zeolite mineral, possesses a unique aluminosilicate framework that facilitates ion exchange, allowing the reversible substitution of its native cations with other ions in solution. This property has been widely investigated and applied in water treatment processes to remove undesirable ions from contaminated water sources.13,14 Analcime's natural abundance and high availability could make it a cost-effective option compared to synthetic zeolites, which often require complex and energy-intensive manufacturing processes. Additionally, the utilization of industrial waste materials for the synthesis of analcime-based zeolites has been explored, potentially reducing production costs and contributing to environmental sustainability.15
Regarding the incorporation of Cs+ in zeolite analcime, the experimental situation is somewhat complex. Kumar et al.16 found that the analcime structure demonstrated negligible adsorption for Cs+ ions at room temperature. Mallah et al.17 also reported no adsorption of Cs+ on both natural and synthetic analcime at temperatures below 100 °C but significant adsorption above 150 °C. In contrast, Liu et al.18 reported that synthetic analcime prepared from fly ash exhibited a maximum Cs+ adsorption capacity of 121.11 mg g−1 at pH = 6 and T = 25 °C, with the adsorption behavior well described by the Langmuir isotherm and a pseudo-second-order kinetic model.
Compared to other zeolites, analcime exhibits a more complex and denser framework, and its intricate crystallography poses significant challenges for understanding the adsorption and ion-exchange mechanisms of Cs+ and other heavy metal ions. To date, only the adsorption sites of common alkali metal ions, such as Na+, in analcime have been reported.19 For larger ions like Cs+, both their adsorption sites and diffusion mechanisms within the analcime framework remain poorly understood. In this work, we employ the density functional theory (DFT) method to characterize the ion-exchange and diffusion mechanisms of Cs+ and other alkali metal ions in zeolite analcime. Computational modeling enables atomic-level manipulation at specific sites, making it particularly suitable for studying materials with complex crystallography such as analcime.20 Through this computational study, we aim to establish a generalized model of ion exchange in analcime, providing a theoretical foundation for its practical applications.
Electron states are simulated using the generalized gradient approximation (GGA) algorithm23 with the Perdew–Burke–Ernzerhof (PBE)23 exchange–correlation functional, which is widely used due to its balance between computational efficiency and accuracy in describing structural, electronic, and energetic properties of materials. The projector augmented wave (PAW) method24 is employed to accurately account for the electron–ion interactions while efficiently handling the valence–core separation. In this approach, the frozen–core approximation is applied, meaning that only valence electrons are explicitly treated in the calculations, while core electrons are represented by an effective potential. To ensure numerical stability and accuracy, a plane-wave basis set with an energy cutoff of 520 eV is employed, 1.3 times the highest ENMAX value among the elements in the system (400 eV for O). The valence electron configurations considered for each element are as follows: Al (3s23p1), O (2s22p4), Si (3s23p2), Li (1s22s12p0), Na (2p63s1), K (3s23p64s1). Rb (4s24p65s1) and Cs (5s25p66s1). These valence states were selected based on the standard PAW potentials provided in VASP to ensure accurate representation of the chemical bonding and the electronic structure. We include dispersion corrections using the DFT-D2 method of Grimme.25 While the dominant interaction between Cs+ and the zeolite framework is electrostatic, the DFT-D2 scheme provides an improved description of additional long-range dispersion contributions that are not fully captured by conventional GGA functionals.
A 1 × 1 × 1 Monkhorst–Pack k-point grid is chosen for Brillouin zone sampling, considering the large cubic unit cell of analcime with lattice parameters a = b = c = 13.567 Å. Given the relatively large unit cell size, the reciprocal space is correspondingly small, making a single Γ-point sampling (1 × 1 × 1) sufficient for accurate total energy calculations. This choice ensures computational efficiency while maintaining reliable accuracy for structural relaxation and energy evaluations.
The climbing image nudged elastic band (CI-NEB) method26 is adopted to calculate the migration energy of extra-framework cations by interpolating multiple intermediate images between two equilibrium states. The CI-NEB approach is a widely used method for finding minimum energy pathways (MEP) in atomic diffusion and transition state calculations. Unlike the standard nudged elastic band (NEB) method,27 CI-NEB ensures that the highest-energy image along the path precisely converges to the true saddle point, thereby improving the accuracy of activation energy predictions. In our calculations, a spring constant of –5.0 eV Å−2 is used, which provides a balanced constraint on image spacing without overly distorting the energy landscape. Depending on the complexity of the migration pathway, the number of images is chosen to be either 11 or 15.
To better represent the aqueous environment's influence on the exchange behavior of extra-framework ions, an explicit solvation model is applied exclusively to aqueous cations that are involved in the ion exchange, while the analcime framework and its extra-framework cations are maintained under vacuum conditions. The specific rationale behind this modeling strategy is given in a subsequent section.
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| Fig. 1 (a) Structure of Si48O96, (b) structure of Al16Si16O96, (c) structure of Na16Al16Si16O96, (d) purely silicious structure of Si48O96, with only the Si atoms shown. | ||
Fig. 1(b) shows the negatively charged Al16Si32O96 analcime structure with the randomly distributed Al substitutions shown in green. The model construction and Al site preference follow a theoretical study by Takaishi28 as there is currently no experimental data on the distribution of Al. Therefore, this particular composition illustrates the structure under Al substitution rather than claiming to be a specific physical structure. Fig. 1(c) shows the same structure with the charge-compensating extra-framework Na+ ions shown in representative position. In this work, to simplify the visualization of extra-framework cations sites and diffusion behavior, the oxygen ions are not shown. Thus, Fig. 1(d) only shows the 48 Si ions in the purely silicious unit cell, with the understanding that there is an oxygen atom between connected Si. All calculations in our work were performed in a simple analcime system with only one Al and one Na ion.
The cubic ANA framework is built from periodic units called cages, as shown in Fig. 2. A single unit cell includes 16 cages with different orientations, where only 2 cages are entirely within a single unit cell, as shown in Fig. 2(a). Other cages span unit cell boundaries, shared by two or more cells. A single cage is delineated by three highly distorted 8-member rings (rings containing eight Si atoms) and two highly distorted 6-member rings. The positions of the three 8-member rings and two 6-member rings in the cage are marked in Fig. 2(b) and (c) respectively, from which it can be seen that these five rings are interconnected. As a result, each Si belongs to multiple different rings. We anticipate that these rings may serve as channels for the diffusion of extra-framework cations through the structure. Finally, Fig. 3 shows each of the 8-member and 6-member rings in a single cage.
The distorted structure of the 8-member rings and the different connectivities of the various atoms to other 6- and 8-member rings means that not all Si sites are structurally equivalent. Fig. 4 categorizes the Si sites into crystallographically distinct types: A (two Si atoms), B (two Si atoms) and C (four Si atoms). The center of the distorted 8-member-ring is at the middle point between B1 and B2, as shown in Fig. 4. The distance between the B1 and B2 atoms is a convenient measure of the size of the ring, 6.202 Å. Although natural and synthesized analcime compositions contain multiple Al atoms and Na+ ions, in this study, we focus on the low-concentration limit by modeling a single Al atom and charge-compensating Na+ ion within the relatively large unit cell. This approach allows us to isolate and capture the essential features of local Al–Na interactions while minimizing the influence of longer-range electrostatic interactions among multiple Al atoms and extra-framework cations. As such, it provides a strong baseline in which to analyze the structural and energetic behavior associated with individual ring environments.
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| Fig. 4 Three distinct Al substitution sites and the Na+ reference adsorption site at the center of the ring. | ||
We have determined the structure and relative energies ΔErel of Na+ for each of these possible Al positions with respect to the energetically most favorable Al site.31
The Na+ ion shifts from the center of the ring towards the Al3+ site due to the weaker repulsion of Na+ by Al3+ than by Si4+. Fig. 5 shows how the Na+ site changes with Al positions. For the A site, Fig. 5a, the Na+ ion is lifted out of the center of the ring and is attracted to the Al. When Al is in the B site, Fig. 5b, the Na+ sits at the ring center. For the C sites, Fig. 5c, the Na+ is again lifted out of the center of the ring. Depending on the specific position of the four C sites, Na+ can be dragged by Al below or above the ring.
The energetic stability of the Na+ is also influenced by Al position, as shown in Fig. 6, which presents relative energies ΔErel of Na+ with respect to the energetically most favorable Al site.
Al on the C site is the most energetically favorable location, though the Gibbs free energy of the B site is less favorable by only 0.01 eV. The free energy of Na+ in the presence of Al on an A site is ∼0.18 eV less favorable than on a C site.
Li ions follow a similar order of energies, the details of which are included in the SI.
Larger cations, K+, Rb+, and Cs+, with atomic radii of 1.52 Å, 1.66 Å, and 1.81 Å respectively, are too big to sit on or close to the center of the 8-member rings. Rather, they occupy sites in the interior of the cage, as shown in Fig. 7(a). To characterize their positions, it is useful to identify the cage center. The centers of three 8-member rings, marked by three semi-transparent black spheres in Fig. 7(b), form an equilateral triangle, with sides of 4.154 Å in length. The center of the cage can reasonably be defined to be the center of the triangle, as shown in Fig. 7(b).
As in the case of Na+, different Al positions result in these larger alkali cations taking positions different from the reference center. Fig. 8(a) shows three types of Al substitution sites based on the topology of the cage. However, the symmetry of the sites with respect to the cage is different from that with respect to an eight-member ring. First, the four C sites in the 8-member ring are split into two different sites with respect to the cage: as Fig. 8(b) shows, type I corresponds to C2 and C4 sites in the 8-member ring, which are below the plane of the ring, while type II corresponds to C1 and C3 sites in the 8-member ring, which are above the plane of the ring. The A and B sites, inequivalent with respect to the symmetry of the ring, are equivalent to each other with regards to the cage and are designated type III.
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| Fig. 8 (a) Three types of Al substitution sites, I, II, and III, relative to cage center, (b) C sites with respect to 8-member rings split into type I and type II with respect to cages. | ||
The relative energies ΔErel of Cs+ for all three Al positions is shown in Fig. 9. Al on the III cite leads to the most energetically stable site.
While these site-specific interactions provide critical insight into local energetic preferences, a complete thermodynamic understanding of Cs+ incorporation requires assessing the exchange energy between Cs+ and Na+ ions. The exchange energy of Cs+ with Na+ in analcime is calculated from the difference in the incorporation energies:11,12
In constructing the reference state for pure water, we considered configurations ranging from one to seventeen water molecules placed in a disorderly way in an 8 × 8 × 8 Å vacuum box. The density reaches 1 g cm−3 when there are seventeen water molecules in the box. As shown in Fig. 11, the total energy of the system scales linearly with the number of water molecules, indicating minimal intermolecular interactions under these conditions. Therefore, we adopted the slope, −14.85 eV, as the reference energy for a water molecule in liquid state.
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| Fig. 11 Total energy of systems containing different numbers of water molecules (1–17) in a 20 × 20 × 20 Å vacuum box. | ||
In this study, the Na+ is hydrated by 4 water molecules in a 20 × 20 × 20 Å vacuum box. This degree of hydration is based on experimental characterization.32,33 The Cs+ is hydrated by 10 water molecules34 in a 20 × 20 × 20 Å vacuum box. Rb+ and K+ also follow a similar order of energies, details of which are included in the SI.
As Table 1 shows, the exchange energy ranges from −1.74 eV to −1.41 eV depending on the Al position. These negative values indicate that the exchange of Cs+ for Na+ is energetically favorable at all sites. When Al is at the A site in the 8-member ring and at the type II site in the cavity, the exchange process will be the most favorable. More information on the reference state and the various energy contributions to the exchange calculation are included in the SI.
| Al position | Exchange energy (eV) | |
|---|---|---|
| CsAlANA(I) | NaAlANA(C) | −1.41 |
| CsAlANA(II) | NaAlANA(C) | −1.48 |
| CsAlANA(III) | NaAlANA(A) | −1.74 |
| CsAlANA(III) | NaAlANA(B) | −1.57 |
In summary, these results provide a thermodynamic assessment of alkali ion exchange in analcime, focusing on the exchange process of Na+ by Cs+. We confirmed that smaller alkali ions Na+ and Li+ preferentially occupy the center of 8-member rings, while larger ions like Cs+, Rb+, and K+ tend to reside near the center of the cage due to steric constraints. Through hydration-referenced exchange energy analysis, we demonstrated that Cs+ exchange with Na+ is energetically favorable across all tested configurations.
For small radii cations, Li+ and Na+, either 8-member-ring and 6-member-ring channels are large enough to diffuse through. A Na+ ion can migrate from one adsorption site (close to the center of an 8-member ring) to the neighboring equivalent adsorption site through the center of 6-member ring. Fig. 12(a) shows the diffusion path and the associated energy profile as determined from CI-NEB calculations. The path shown is from the adsorption site to the peak of the barrier, which lies at the center of the 6-member ring. Fig. 12(b) shows the energy along the diffusion path with a barrier height of 0.39 eV. Interestingly, there is not a single peak at the center of the 6-member rings, but rather two peaks, each very close to the center of the two cages. Just as the Al position affects the adsorption energy itself, the Al position has a small effect on the energy barrier, as shown in the additional migration energy profiles in the SI.
The migration path of Na+ ions though the 8-member rings is simpler, as shown in Fig. 12(c), also showing a maximum close to the center of the cage. The height of the corresponding barrier, Fig. 12(d), is 0.35 eV, similar to the migration energy for the 6-member ring channel as the two migration paths have the same peak position.
The story is somewhat different for K+, Rb+ and Cs+. Their adsorption sites are close to the center of the cage, and so must pass through unfavorable sites at the centers of the 6- or 8-member rings during migration, as shown in Fig. 13.
The first pathway starts from the adsorption site at the cage center, travels through the center of the 8-member ring and ends up at the neighboring cage center. The migration energy profile when Al is at site II, shared by two cages, is shown in Fig. 14. The saddle point is at the center of the 8-member ring. i.e., at the Na+ adsorption site. The migration energy for Cs+ is 1.35 eV, with lower energies 0.75 eV and 0.49 eV for the smaller Rb+ and yet smaller K+ ions. The migration energy varies slightly with Al positions, leading to a nonsymmetric migration energy profile, as shown in the SI.
The second pathway starts from the cage center, travelling through the center of the 6-member rings, ending up at the neighboring cage center. The migration energy profile is shown in Fig. 15. Unlike the 8-member ring migration path, the 6-member ring paths are equivalent when Al is at any of 6 sites of the 6-member ring. The saddle point is near the center of the 6-member ring, though the exact position depends on the species. Due to the smaller size of the 6-member ring channel compared to the 8-member ring channel, the energy barrier for Cs+ increases to 3.37 eV. Such a high energy barrier indicates that Cs+ cannot diffuse through 6-member-ring channels. The barriers for Rb+ and K+ are smaller, 1.62 eV for Rb+ and 0.77 eV for K+, but still substantially larger than through the 8-member ring. Thus, for all three cations, migration through 8-member rings should dominate the diffusion if diffusion occurs under a given condition. Importantly, the 8-member rings form a continuous, interconnected network throughout the analcime framework, allowing for long-range ion transport. As a result, the poor accessibility of the 6-member ring channels does not significantly impede overall cation mobility within the structure.
The calculated 8-member ring migration barrier of 1.35 eV for Cs+ in analcime raises the question of whether such a value is prohibitively high for diffusion to occur. A direct assessment of diffusivity is complicated by the lack of reliable estimates for the diffusion pre-factor (D0), making it difficult to evaluate migration rates solely from the energy barrier. Nonetheless, comparison with experimental observations provides useful insights. Na+, which is commonly found in both natural and synthetic analcime, has a reported migration barrier of approximately 0.3 eV, consistent with facile mobility at ambient conditions. In contrast, Cs+ is not appreciably absorbed by analcime at room temperature, and measurable adsorption is only observed at elevated temperatures above 150 °C.16,17 The 1.35 eV barrier for Cs+ is roughly four times larger than that of Na+, and according to the Arrhenius relation, the exponential factor exp(−Ea/RT) for Na+ is about 16 orders of magnitude higher than for Cs+ at a given temperature. This analysis indicates that Cs+ migration in analcime requires substantially higher thermal activation.
Furthermore, calculations of energy barriers to migration demonstrate that Na+ exhibits low activation energies (∼0.35 eV) for migration through both 6-member and 8-member ring channels, consistent with the fact that Na+ is typically observed in natural analcime. By contrast, Cs+ primarily migrates through the 8-member ring pathway with an energy barrier of 1.35 eV, while diffusion through the 6-member ring is significantly hindered by a much higher energy barrier of 3.37 eV. The larger radius of Cs+ makes it less mobile than Na+, which suggests that higher thermal activation is required to enable Cs+ diffusion, consistent with the experimental findings by Kumar and Mallah et al. described in the introduction.
The complete Cs+ exchange mechanism can be summarized as the following: once a Cs+ ion enters the cage center, it disturbs the charge balance of the analcime system due to the excess positive charge. Given that Cs+ replacing Na+ is energetically favorable, the system can be expected to expel the Na+ to restore charge neutrality.
Overall, our study provides a theoretical foundation for understanding alkali ion exchange in the zeolite analcime. Further experimental and theoretical studies are necessary to validate these findings and explore potential modifications to enhance Cs+ incorporation in analcime. Future research could investigate the role of water coordination, the effect of framework flexibility.
The raw DFT input/output files and NEB calculation data used to evaluate migration energy barriers are available from the corresponding author upon reasonable request.
Footnotes |
| † Current Address: Sandia National Laboratories, Livermore, CA, 94551, USA. |
| ‡ Current Address: Los Alamos National Laboratory, Los Alamos, NM, 87545, USA. |
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