Open Access Article
Hawkins S.
Shepard
,
Emanuel
Zlibut
,
Jody C.
May
,
Benjamin K.
Blakley
and
John A.
McLean
*
Department of Chemistry, Center for Innovative Technology, Vanderbilt University, Nashville, TN 37235, USA. E-mail: john.a.mclean@Vanderbilt.Edu
First published on 26th August 2025
Cyclodextrins (CDs) are macrocyclic oligosaccharides that have the ability to form host–guest inclusion complexes due to their amphiphilic properties, thereby allowing for an increase in the solubility and bioavailability of encapsulated small molecules, such as food constituents and active pharmaceutical ingredients (APIs). While solution-phase properties of CD inclusion complexes have been extensively studied, less is known about the prevailing coordination environment of metal-CD complexes in the absence of bulk solvent. Here, we investigate the gas-phase structural implications of alkali-metal complexation with the three naturally occurring cyclodextrins (αCD, βCD, and γCD) and a suite of linear maltodextrins using structurally-selective ion mobility-mass spectrometry (IM-MS) analysis. For the maltodextrins, the IM-MS analysis revealed an expected linear relationship between the number of monosaccharide units and the measured collision cross section (CCS), however, the CDs exhibited complex size-mass behavior, notably with βCD adopting nearly the same CCS values as the larger γCD, irrespective of the charge carrier. CCS measurements in helium drift gas were obtained on a drift tube IM instrument and used to align to computational modeling outputs which were interpreted for atomistic-level information including bond distances and coordination geometries. Predicted structures for [CD + Na]+ indicate the unusual gas-phase structural behavior of CDs is a consequence of different charge location preferences for αCD and γCD versus βCD. Taken together, this work provides a structural context for the underlying metal–host interactions that serve as scaffolds for higher-order CD complexation and supramolecular assemblies.
While many studies have demonstrated the use of MS and IM-MS techniques in the characterization of CDs and CD inclusion complexes, far fewer have used such data to elucidate the specific interactions of CDs with metals.8–14 As noted by Norkus, CD structure, and therefore functionality, is influenced by interactions with metal ions, and since the efficiency of host–guest complex formation is contingent on the structure of the host molecule, understanding the interaction of CDs in the presence of metal ions is important, especially considering the electrolytic composition of biological systems.15 Studying the conformational behavior of CDs necessitates the use of structurally-selective analytical strategies. Whereas MS offers a highly-sensitive and rapid gas-phase discrimination of ions based on mass-to-charge (m/z), mass measurements alone cannot provide specific information concerning gas-phase conformations.16–18 However, due to compatible analytical timescales, IM can provide structural insights into the gas-phase behavior of host molecules such as CDs and is often complimented with theoretical modeling.19–21 Computational investigations can provide predicted gas-phase conformations for host–guest inclusion complexes, including alkali-metal CD complexes to interpret the results obtained in IM-MS experiments.22 Previous ab initio investigations of CD complexes have suggested that metal cations preferentially orient toward the smaller (primary) opening of the CD, favoring the stability afforded by coordinating to the primary hydroxyl groups with reduced steric effects.23–25 This orientation has become the canonical interpretation of metal-CD complexation, serving as the structural basis for informing subsequent analyses of host–guest incorporation of APIs.26 However, because initial metal-CD structures hold such an important role in selectivity and guest incorporation, it is imperative to validate the alignment of computational structures with experimental observations.
In this study, we investigate the structural effects of non-covalent alkali-metal coordination to both cyclodextrins and a suite of linear analogs by utilizing a structurally informative MS workflow that integrates highly-accurate drift tube IM measurements with computational modeling. This work investigates the three naturally occurring cyclodextrins—αCD, βCD, and γCD—alongside linear maltodextrins ranging from four to ten glucose units in length, thereby providing a comprehensive analysis of both cyclic and short-chain, linear oligosaccharide systems. Five alkali-metal cations were used to evaluate the impact of ion size, charge density, and coordination preferences on the gas-phase structures of the resulting host–guest complexes. By systematically characterizing the CCS values of these complexes and correlating empirical data with theoretical modeling results, we seek to identify generalizable trends in alkali-metal coordination and to elucidate how these interactions influence the anhydrous structures of metal–dextrin complexes. These findings aim to provide fundamental insights into the non-covalent chemistry of gas-phase carbohydrate complexes and inform the understanding of solution phase host–guest systems for applications ranging from pharmaceutical excipients and food additives to supramolecular assemblies.
:
2 methanol
:
water to achieve a total metal cation concentration of 0.01 M. This equimolar mixture of the cations was then combined with the different dextrin stock solutions in a 1
:
1 ratio of cation
:
dextrin. Finally, sample solutions were serially diluted to a final concentration of 10 μM in 3
:
2 methanol
:
water for IM-MS analysis.
The single-field calibration method implemented in this work enables broadband spectral conversion of arrival times to CCS values. In the context of the uniform field drift tube instrumentation used here, single-field CCS calibration strategies are often contrasted by conventional stepped-field methods, wherein the drift field is varied to determine ion mobility from first principles independent of external calibrants. While both approaches to calculating CCS values are effective under appropriate conditions, the single-field calibration method was chosen to mitigate the risk of electrical discharge when using helium drift gas under higher drift fields of the stepped-field method.30 Since the single-field approach necessitates the use of calibrants with well-characterized CCS values and also relies on empirical regression, the DTCCSHe values calculated for the dextrin–cation complexes were validated against an internal standard and compared to previously reported experimental CCS values whenever possible.
The arrival time of the unbound cesium cation (Cs+, m/z 132.90) was measured concurrent with the primary complexes of interest. Implementing the same calibration curves as were used for the dextrin species, the DTCCSHe value of Cs+ was determined to be 29.05 ± 0.01 Å2 (n = 30), which is within 2% of the value reported by Ellis et al. of 29.6 Å2 ± 3%.34 Additionally, when comparing DTCCSHe values, namely [αCD + Na]+ and [βCD + Na]+, calculated in this study with values measured on legacy IM platforms, the values are consistent with both the error associated with reproducibility and expected cross-instrument variability.35 As such, the DTCCSHe values presented in this work are considered accurate.
Examining the DTCCSHe values determined in this study reveals an expected general increase in size as the number of constituent glucose subunits increases (Fig. 2A). Each of the seven linear dextrins, as well as the three cyclodextrins, were observed to form complexes with each of the five alkali cations as well as protonated [M + H]+ adducts. Higher order complexes (e.g., [M + 2X]2+, [2M + X]+, Fig. S1) are also observed in the IM-MS spectra which show evidence of broad peak distributions indicative of the presence of multiple, unresolved conformers, though these higher-order complexes are not discussed in this present work. Importantly, there is no evidence for multiple structural isomers coexisting within the IM peak profiles for any of the mononuclear carbohydrate–metal complexes, [M + X]+, that are the focus of this study. Specifically, the mobility distributions of [βCD + K]+ and [βCD + Na]+ both benchmark at the expected resolution of this instrument (helium gas, Rp ∼40), and thus show no evidence of peak broadening which would otherwise indicate conformational diversity.30 Furthermore, high-resolution IM (HRIM) analyses of [βCD + Na]+ on a TWSLIM platform found no evidence of conformational isomers under high IM resolution analysis (Rp = 167, Fig. S2). Previous studies of βCD-sodium complexes using a multi-pass TWSLIM platform also noted only one primary gas-phase structure.36 As such, the experimental mononuclear βCD data presented in this work is interpreted in the context of a single, predominant gas-phase structure existing within the IM measurements.
Because the alkali metals were introduced as equimolar mixtures, the relative abundances observed provide insights into the preferred cation affinities of these carbohydrates. Observations are similar for all dextrins, with Na+ and K+ adducts exhibiting the highest abundances, whereas the remaining cations (Li+, Rb+, and Cs+) being present in minor relative abundances (20% or less). Sodium complexes exhibited the highest measured abundances for all carbohydrates except αCD and βCD, where both the sodium and potassium adduct showed similarly high abundances. Interestingly, protonated adducts are generally not observed prominently for carbohydrates, however here the [M + H]+ species is observed in high abundance for both αCD and γCD, although it should be noted that no efforts were made to incorporate acid additives or pH modifiers to these samples. Interday abundance comparisons and DTCCSHe for each dextrin are summarized in Fig. S3 and S4.
While empirical DTCCSHe values generally increase with the ionic radii of the alkali metal cation for CD complexes, several maltodextrin host–ion pairs exhibit deviations from this correlation. While all maltodextrin–metal complexes of the same carbohydrate length display a similar %CCS difference of <5%, complexes incorporating the smallest alkali metal cation, [M + Li]+, frequently do not represent the most compact ion form. This non-intuitive size correlation may arise from host–ion specific interactions such as conformational locking or variations in binding preferences and hydrogen bonding networks that directly influence the resulting gas-phase conformations. These effects, though subtle, may reflect metal-dependent intramolecular folding, wherein certain cations are more conducive for initiating structural compaction despite possessing larger ionic radii.
The magnitude of these changes in CCS varies in response to cation binding also appears to correlate with the host size. For example, when comparing the smallest and largest cations in this study, αCD and βCD both exhibit only a modest increase of ∼1.8% between Li+ and Cs+, whereas γCD demonstrates a much larger 8.7% increase. This larger observed difference in CCS could suggest greater conformational flexibility or variable coordination behavior in γCD, which is consistent with prior observations in cyclic ionophores, where ion coordination geometry and cavity size influence metal binding and structural compaction.37
When comparing the same cation across the various maltodextrin complexes, a high degree of linearity with respect to m/z and DTCCSHe trends are observed, with all cation-specific mobility-mass (CCS-m/z) correlations exhibiting an R2 greater than 0.99. A representative plot displaying the linearity of the maltodextrin suite for the sodium complex is found in Fig. 3, with the remaining plots being included in Fig. S5. Conservation of linearity in individual alkali metal trends correlates to adduct type rather than number of dextrin units, indicating that the dominant influence on gas-phase structure for these linear species is the charge carrier. Thus, the unique charge distribution and coordination of the different alkali metal cations are the key drivers of the observed gas-phase conformations as reflected in their corresponding DTCCSHe values.
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| Fig. 3 Representative regression plot displaying linearity of maltodextrin analytes complexed with sodium. All cation-specific mobility-mass correlations exhibit an R2 greater than 0.99. | ||
Interestingly, a similar linear trend for analytes with the same charge carrier is not observed for the cyclodextrins, suggesting that the contribution of the alkali metal type is likely masked by the gas-phase structure of the corresponding CD-metal complex, as might be expected if the cation were bound within the cavity of the CDs (Fig. S6). The specific CCS differences observed are likely due to the diminished degrees of freedom inherently associated with a cyclic structure, with number of dextrin subunits present within the ring largely dictating the coordination geometries. This difference becomes especially evident when comparing the DTCCSHe values of the three cyclodextrins alongside the maltodextrins containing the same number of subunits (Fig. 2B). For example, the sizes of the sodium complexes for M6 compared to αCD (0.63%) as well as M8 compared to γCD (1.33%) are all within 2% of one another. However, the sodium complex of M7 and βCD exhibits a stark difference of 7.48%. Because M7 falls along the empirical trendline for the maltodextrin series, this comparatively large %CCS difference between M7 and βCD is not a consequence of M7, but rather due to the anhydrous structure of βCD exhibiting a size larger than would be predicted from the linear dextrin trend. This apparent anomalous increase in size is observed in all of the metal complexes formed by βCD, including [βCD + H]+ suggesting this increase in CCS is specific to the gas-phase structural preference of βCD and not a consequence of specific cation coordination.
By subjecting candidate structures to a clustering analysis based on the root-mean-square (RMS) distance of atoms from superimposed structures (Table S4), a representative candidate structure for the gas-phase conformations of each complex can be visualized. These average structures were selected based on their RMS deviation from the mean and provide a visual reference (Fig. 4) for the molecular geometry of the sodium-coordinated complexes. The side views provide a lateral perspective that distinguishes both secondary and primary hydroxyls, while the bottom view represents a perspective of looking through the primary opening of the conical frustum.
The differences in the relative location of the sodium cation in [βCD + Na]+ are immediately apparent when compared to the other complexes. Specifically, in [αCD + Na]+, [M7 + Na]+, and [γCD + Na]+, the sodium cation is incorporated in a central position relative to the carbohydrate subunits and preferentially coordinates with the primary hydroxyls, which is in agreement with previous investigations of site-specific CD complexation, especially those involving [αCD + Na]+.24 By contrast, the sodium cation present in the average structure of [βCD + Na]+ is located along the periphery of the larger, secondary opening of the cyclodextrin.
In the absence of a cation, the structures adopted by cyclodextrins are dictated by the capacity of their secondary hydroxyl groups to interact with and form hydrogen bonds with adjacent moieties. In βCD, all constituent secondary hydroxyls are able to hydrogen bond, allowing for the formation of a symmetrically coordinated ring of hydroxyls along the larger secondary opening of the conical frustum. However, in the cases of αCD and γCD, symmetric coordination of hydroxyls are absent due to the slightly distorted sterics of glucopyranoside units in the former and the non-coplanar, flexible structure of the latter.1 The linear dextrin M7, despite exhibiting an ouroboric structure, is similarly hindered from adopting an ordered coordination structure due the steric interference resulting from its terminal units not being covalently linked as they are in βCD. The presence of a preorganized network of intramolecular hydrogen bonds in βCD thus provides a thermodynamically-favorable environment for initial metal coordination along the secondary rim of the cyclic structure in solution, which appears to be preserved in the gas phase.1,38 In the other structures, where this chain of hydrogen bonding is either disrupted or incomplete, the more favorable region for coordination is found to be the center of the smaller, primary opening, where the metal has the greatest probability of interacting with the largest number of primary hydroxyls.
Previous computational studies on metal-CD complexes report two general groups of conformations: those that conserve the initial truncated cone orientation formed by the glucopyranoside residues and those that disrupt this orientation.25 In this present study, introducing an alkali metal cation to βCD has the effect of disrupting concerted hydrogen bonding, causing the cyclodextrin to distort, with its primary hydroxyls no longer directed inward but instead displaying a more vertical orientation relative to the primary axis of the cavity. This change in structure in response to metal coordination, along with the disruption of hydrogen bonding, results in a measurable increase in the DTCCSHe values adopted in the gas phase for [βCD + Na]+, likely resulting in the comparatively large %CCS difference between [βCD + Na]+ and its linear analog, [M7 + Na]+. Some additional metal-independent structural details are also reflected in the representative candidate structures projected. For example, in the bottom view of [αCD + Na]+, one of the six subunits is visibly canted, underscoring the expectation of distorted sterics associated with αCD. In the context of metal-coordination, however, this has the effect of providing an additional primary hydroxyl capable of coordinating with the sodium cation. Another example is the flexing and flattening of the truncated cone structure observed for [γCD + Na]+, wherein the conical conformation begins to contort into a more disk-like orientation. The asymmetric structural motifs found in the even-numbered cyclodextrin analytes (αCD and γCD) are more likely to mirror the gas-phase structures of their linear counterparts, which would also experience steric differences due to the lack of covalently-bonded terminal glucopyranosides.
A detailed evaluation of the representative candidate structures reveals specific differences in the coordination environment adopted by non-covalent metal–dextrin complexes (Fig. 5). The extent of sodium cation coordination observed in each of the four candidate structures was assessed by analyzing the spatial arrangement and proximity of oxygen atoms within a 3.5 Å radius threshold which was chosen based on reported bond distances associated with alkali-metal coordination.39 When considering both the total number of interactions and the identities of participating oxygen species, αCD exhibited the most limited coordination sphere, with only four oxygen atoms contributing short-range interactions and each constituent oxygen belonging to a primary hydroxyl (Fig. 5A). By contrast, βCD, γCD, and M7 all demonstrated a more populated coordination environment, with six instances of sodium–oxygen interactions occurring within a distance of 3.5 Å from the metal. Despite containing the same number of interactions, however, the specific oxygens involved in coordination varied widely across the different dextrins. For example, M7 exhibited coordination with five primary hydroxyls and one secondary, terminal hydroxyl due to its linear structure (Fig. 5C). The flattened structure adopted by γCD results in a total of six interactions within 3.5 Å, with an even number (3/3) distributed between primary and secondary hydroxyls (Fig. 5D). To accommodate this higher level of coordination, one glucopyranoside subunit of γCD rotates relative to the others (Fig. S7). Despite the torsion required to adopt this configuration, this candidate structure corresponds to the lowest energy region of the scatter plot, and thus the energy expenditure to contort the subunit may be offset by the additional coordination gained from this configuration.
In terms of interaction distances, the primary hydroxyls of γCD are, on average, closer to the sodium cation, and as such likely exert a stronger influence on the stability and molecular framework of [γCD + Na]+. Finally, for [βCD + Na]+, the coordination environment of the representative structure is significantly different than what is predicted for the other three complexes. Due to the favorability of the stabilized hydrogen bonding network along the secondary opening, the candidate [βCD + Na]+ configuration is entirely absent of close interactions with any primary hydroxyl oxygens. Instead, the coordinating atoms consist of six constituents, three secondary hydroxyl and three glycosidic oxygens, of which two are oxygens involved in the 1–4 covalent bridge between glucose subunits. The favorable coordination structure which forms along the wider, secondary opening of βCD is likely one of the driving forces dictating the strong host–guest interactions that are characteristic of βCD-based inclusion complexes, and may provide insight into the potential structural perturbations impacting the loading and release of exogenous guest compounds.22,26 A summary of bond distances for sodium coordination are provided in Table S5, while complete atom list and coordination environments for αCD, βCD, γCD, and M7 can be found in Tables S6, S7, S8, and S9, respectively.
While gas-phase conformations are not expected to be identical to those present in solution, binding preferences resulting from structural properties and intrinsic interactions (namely hydrogen bonding) are able to exist in the gas-phase uninhibited by solvent effects, meaning that gas-phase analyses are representative of preferential binding sites and intrinsic stabilities that serve as the foundation for solution-phase interactions. Furthermore, previous IM-MS and MS/MS studies indicate structural similarity between anhydrous, gas-phase structures and their solution-phase counterparts, thus IM-MS investigations supported by computational modeling can serve as a means to investigate native-like conformations.40,41
Computational results yielded theoretically generated structures for the coordination complexes. While the HF/6-31G* level of theory has known limitations, particularly in capturing dispersion interactions and precise coordination geometries, the trends observed here are consistent with previously reported DFT-calculated structures, with these results providing a reasonable qualitative model for interpreting gas-phase IM-MS data. Structural interpretation of the aligned candidate structures suggested that all of the dextrins tended to adopt anhydrous structures where the metal ion is positioned symmetrically at the center of the coordination complex, except βCD, which prefers an asymmetric coordination of the sodium towards the secondary hydroxyls of the CD structure. This periphery binding of the metal cation in βCD results in a vacancy that provides a favorable coordination environment for guest inclusion; thus, the metal-coordinated βCD complex adopts a rigid anhydrous structure with a corresponding higher CCS than is observed by the other CDs which may correlate with βCD's high affinity for forming small molecule host–guest complexes.
In the context of pharmaceutical formulation, these results imply that the choice of counterions, excipients, and API can induce specific structural perturbations that could impact drug loading or release. As IM-MS instrumentation and molecular modeling strategies continue to progress, further examination of metal-CD systems with expansion to multi-charged and non-alkali metal cations and anions, as well as functionalized CDs, will remain integral to the informed application of CD host–guest inclusion complexes.
The SI includes IM-MS instrument settings, DTCCSHe measurements for cyclodextrin and maltodextrin molecules, an outline of the computational modeling workflow, an RMS clustering analysis of predicted structures, abundance comparisons for cyclodextrin and maltodextrin molecules, individual cation-specific correlations, alternate perspectives of the [γCD + Na]+, summary of bond distances for sodium coordination, and complete atom lists and coordination environments for modeled structures. Initial visualization and processing of empirical data was performed in MassHunter IM-MS Browser 10.0 (Agilent Technologies). Determination of helium CCS values was conducted in Microsoft Excel using the single-field calibration equation and tune mix calibrant helium reference values.29,30 Theoretical modeling was performed using Gaussian 16 (M. Frisch et al., Gaussian 16; Gaussian, Inc.: Wallingford, CT, 2016), AMBER (D. Case et al., Amber 2022; University of California: San Francisco, 2022), and MOBCAL (T. Wyttenbach et al. J. Am. Soc. Mass Spectrom. 1997, 8, 275–282). CCS values reported in SI are also deposited and freely-available in the Unified CCS Compendium (J. Picache et al., Chem. Sci. 2019, 10(4), 983–993; https://mcleanresearchgroup.shinyapps.io/CCS-Compendium/). See DOI: https://doi.org/10.1039/d5cp01748c
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