Ibon
Alkorta
*a and
Anthony
Legon
*b
aInstituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, E-28006 Madrid, Spain. E-mail: ibon@iqm.csic.es; Tel: +34 915622900
bSchool of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK. E-mail: a.c.legon@bristol.ac.uk; Tel: +44 (0)117 331 7708
First published on 20th November 2024
Nucleophilicities for a range of simple carbene molecules acting as hydrogen bond acceptors B in forming complexes B⋯HX are reported. The carbenes chosen to fulfil the roles of a Lewis base are B = R2M, cyclo-(CH)2M, H2CC
M and two N-heterocyclic carbenes, where M is one of the group 14 tetrel atoms, C, Si, Ge or Sn and R = H, CH3, and F. All the carbenes but CH2 have a singlet electronic ground state. The Lewis acids, HX, involved are HF, HCl, HBr, HI and HCN, HCCH, and HCP. Nucleophilicities, NB, of the carbenes were determined graphically from equilibrium dissociation energies, De, for the process B⋯HX = B + HX by using the equation De = c·NB·EHX, where c = 1.0 kJ mol−1 and the EHX are known numerical electrophilicities of the Lewis acids HX. De values were calculated ab initio at the CCSD(T)-F12c/cc-pVDZ-F12 level of theory, which for CH2 refers to the singlet electronic excited state. It was established that NR2M values lie in the order of M = C ≫ Si ∼ Ge ∼ Sn for a given R and in the order R = CH3 > H > F for a given M. Reduced nucleophilicities, NB/σaxial, were determined by using the molecular electronic surface potential σaxial at atom M (which lies on the C2 axis) on the 0.001 e Bohr−3 iso-surface of each carbene molecule, as calculated at the MP2/aug-cc-pVTZ level. For R2M having R = CH3 and H and cyclo-(CH)2-M carbenes, the determined values of NB/σaxial are shown to be independent of R and M.
It is well-known that CH2 has a triplet electronic ground state, with energy separation from the singlet calculated by Schaefer et al.11 to be 46(8) kJ mol−1. The parent carbene CH2 can be included in the present discussion however because the ab initio calculation carried out yields the singlet state. Evidently, carbenes (CH3)2C and F2C have a singlet ground state, for which Hu12 calculates the singlet states to be lower in energy than the triplet states by 224 and 3 kJ mol−1, respectively. All other group 14 analogues of carbenes shown in Fig. 1 possess a singlet ground state. Consequently, the tetrel atom in each carbene considered here carries a non-bonding electron pair along the C2 axis.
A convenient aid when discussing the propensity of a simple carbene to form hydrogen-bonded complexes is the so-called molecular electrostatic surface potential, MESP.13 Diagrams of the 0.001 e Bohr−3 iso-electron density surface for each of F2Si, H2Si and (CH3)2Si are shown in Fig. 2. The corresponding MESP diagrams for M = C (including H2C), Ge and Sn are shown in Fig. S1 of the ESI.† The red regions in each case correspond to the negative (and therefore nucleophilic) regions of the iso-surface. The value of σaxial of the MESP on the C2 axis of each molecule is shown and coincides with the non-bonding electron pair of the R2M molecule. Diatomic or linear Lewis-acid molecules HX (X = F, Cl, Br, I, CN, CCH or CP) are therefore likely form hydrogen-bonded complexes R2M⋯HX in which the electrophilic H atom of HX interacts with the non-bonding electron pair. Hence, the equilibrium geometries of the R2M⋯HX complexes should (like the parent molecules) have a C2 axis of symmetry, with HX lying along that axis. It should be note that most of the F2M are electrophilic (positive MESP) along the C2 axis at M and are therefore expected to form, at best, weak complexes of the required symmetry with the HX molecules of interest.
The nucleophilicity of a given carbene molecule acting as a Lewis base B is determined by the following method. It has been shown14 that the equilibrium energy De required for dissociation of a hydrogen-bonded complex B⋯HX of a Lewis base B and a Lewis acid HX into infinitely separated B and HX can be described by eqn(1), where NB is the nucleophilicity of B and EHX is the electrophilicity of HX:
De = c·NB·EHX | (1) |
The constant c is chosen as 1 kJ mol−1 for convenience, so that, if De is given in kJ mol−1, NB and EHX are dimensionless. Many NB and EHX values have been generated15 by least-squares fitting of ab initio-calculated De values to eqn (1), including the set of EHX for HF, HCl, HBr, HI, HCN, HCCH and HCP. According to eqn (1), if, for a series of complexes B⋯HX in which B is fixed but HX is varied, De/c is plotted as the ordinate and EHX as the abscissa, and then the gradient of the straight line gives the nucleophilicity NB of B. By such means, new values of NB not included in the initially generated set can be obtained. Recent applications of this approach include the series of Lewis bases ethyne, ethene and cyclopropane16 and monohydrides of group 13 elements B, Al and Ga.17 Alternatively, the gradient of the De/c versus NB graph for a series of complexes B⋯A, in which A is a fixed Lewis acid and the B are a series of Lewis bases (such as N2, CO, C2H2, C2H4, HCN, H2O, and NH3) of known NB values, yielding the electrophilicity EA of A. Applications of this type have recently generated the electrophilicities of various interhalogens (via halogen-bonded complexes B⋯XY18), and of the group 14 elements Si, Ge and Sn in tetrel-bonded complexes B⋯H3M–X (M = Si, Ge, Sn).19
The nucleophilicities of the Lewis bases shown in Fig. 1 were calculated by using the approach set out in the preceding paragraph, namely by calculating the ab initio De values of the hydrogen-bonded complexes (e.g. R2M⋯HX, where X = F, Cl, Br, I, CN, CCH, and CP) and finding the gradients of De/c versus EHX plots. We also investigate here whether a reduced nucleophilicity can be defined by the gradient of a graph of De/σaxialversus EHX, as established for other series of Lewis bases.20 This quantity is of interest because it has been shown to be a property only of the atom of the Lewis base B that is directly involved in, for example, a hydrogen bond and is independent of the remainder of B. Moreover, together with its analogous quantity reduced electrophilicity of a Lewis acid, it provides a method21 of calculating the De values from the properties of the separate molecules B and HX.
The corresponding diagram for the series (CH3)2M⋯HX when M = C, Si, Ge or Sn is shown in Fig. 4. It should be noted that, in Fig. 4, the origin is no longer included as a point for (CH3)2C⋯HX because of a significant non-zero intercept (This behaviour seems to be a characteristic of Lewis bases that have methyl groups attached, see for example Fig. 6 of ref. 16.). The points for (CH3)2C⋯HX when X = Cl, Br, and I are excluded because of unduly large De values resulting from significant (CH3)2CH+⋯X− characters, as indicated by short distances r(C–Haxial) and lengthened distances r(H–X). The (CH3)2C⋯HX points having X = F, CN, CCH and CP seem to be better behaved and indicate that the axial nucleophilicity NB of M = C in this series is considerably greater than those having M = Si, Ge and Sn. It is noted that the three molecules associated with rows 2, 3 and 4 of the Periodic Table again have very similar axial nucleophilicities. In fact, the ratios of NB are 3.19(11)/1.36(8):
1.18(8)
:
1.00 for H2C/H2Si/H2Ge/H2Sn and 3.25(19)
:
1.40(14)
:
1.19(13)
:
1.00 for (CH3)2C/(CH3)2Si/(CH3)2Ge/(CH3)2Sn; these ratios are therefore identical for H2M and (CH3)2M within the standard errors.
Graphs of De/c versus EHX for the series F2C⋯HX, F2Si⋯HX and F2Ge⋯HX are shown in Fig. 5 (data are unavailable for F2Sn⋯HX because the region of the MESP on the C2 axis is positive and data are limited for F2Ge⋯HX because of evidence of ionic characters for some of the HX complexes). The values of the nucleophilicity decrease from 3.39 for M = C, through small positive 0.93 for M = Si and becomes negative −0.39 for Ge. This is reflected in the MESPs at the tetrel atom on the C2 axes of F2C, F2Si and F2Ge which have the values (see Fig. S1, ESI†) of −85.0, +1.5 and +49.8 kJ mol−1, respectively. Such MESP values indicate that the complexes with HX molecules are likely to be weak, except for F2C⋯HX. This expectation is borne out by the gradients of the lines in Fig. 4. Presumably, for F2Ge⋯HX, this is negative because of repulsion between the positive axial MESP at Ge on the C2 axis of F2Ge and the electrophilic atom H of the Lewis acids HX.
The corresponding graphs for the R2Si⋯HX series are shown in Fig. 7, while that for R2Ge⋯HX is shown in Fig. S2 of the ESI.† The patterns in Fig. 7 and Fig. S2 (ESI†) are similar to those in Fig. 6, except that it decreases in nucleophilicity when CH3 is replaced by H and then F becomes smaller from M = C to M = Si to M = Ge. As discussed in connection with Fig. 5, the gradient of the graph associated with the F2Ge⋯HX line in Fig. S2 (ESI†) is negative. For the R2Sn series, R = F is not available (for reasons discussed earlier), but the graphs for the (CH3)2Sn⋯HX and H2Sn⋯HX are shown in Fig. S3 (ESI†). The axial nucleophilicity decreases by ∼0.8 in this case when CH3 is replaced by H.
σ axial/(kJ mol−1) | ||||
---|---|---|---|---|
Carbene | M = C | M = Si | M = Ge | M = Sn |
H2M | −151.0 | −65.9 | −60.1 | −41.4 |
F2M | −85.0 | +1.5 | +49.8 | +86.1 |
(CH3)2M | −178.7 | −101.0 | −91.1 | −65.9 |
cyclo-(CH)2M | −186.9 | −46.2 | −32.8 | −1.8 |
H2C![]() ![]() |
−168.0 | −20.2 | −17.8 | +6 |
cyclo-NHM | −204.0 | −87.1 | — | — |
It is clear from Fig. 9 that the ten straight lines of differing gradients previously generated in De/c versus EHX graphs have become parallel and effectively conflated when De is divided by σaxial. The lines are of almost equal gradient (except perhaps for that of H2Sn⋯HX). Otherwise, all gradient values fall within two standard errors of the mean value 0.0417 (standard deviation = 16).
This provides strong evidence that ИB = NB/σaxial can indeed be described as a reduced nucleophilicity that is common to the Lewis bases involved, namely, H2M, (CH3)2M and cyclo-(CH)2M, where M = C, Si, Ge or Sn. It should be noted that not only are the quantities ИB = NB/σaxial from Fig. 9 independent of the groups attached to a given tetrel atom, but they also appear to be independent of the group 14 atom.
Some series do not appear in Fig. 9. The cyclic carbene cyclo-(CH)2Sn has the very low value of σaxial of −1.8 kJ mol−1. Clearly, the quantity ИB = NB/σaxial increases rapidly as the σaxial value approaches zero and becomes infinite when the σaxial value reaches zero. The ИB value is therefore very sensitive to small errors in σaxial, is unreliable close to the singularity and becomes negative after the singularity. For these reasons, members of the series F2M⋯HX, in addition to cyclo-(CH)2Sn⋯HX, have been excluded from Fig. 9. For (CH3)2C⋯HX (as indicated earlier), there is evidence of ionic character in several points, with only four available, and consequently they are not included in Fig. 9.
Questions that arise for the carbenes H2CC
M are (a) whether a reduced nucleophilicity can be assigned to these molecules, and, if so, (b) whether it is identical to those determined viaFig. 9? To answer these questions, plots of De/c versus EHX for the hydrogen-bonded complexes H2C
C
M⋯HX (M = C, Si or Ge and X = F, Cl, Br, I, CN, CCH, and CP) are displayed in Fig. 10. The series H2C
C
Sn⋯HX is excluded because the Lewis base has a small positive σaxial (See Table 1 and earlier discussion). Fig. 10 indicates clearly that the order of the nucleophilicities of the three carbenes is NH2C
C
C ≫ NH2C
C
Si ∼ NH2C
C
Ge.
It is immediately obvious from Fig. 11 that the division of the points in Fig. 10 by the appropriate σaxial values from Table 1 conflates only two of the straight lines (those associated with M = Si and Ge) to give a single gradient. Accordingly, the gradients are now the reduced nucleophilicities ИB = NB/σaxial of the two Lewis bases B = H2CC
Si and H2C
C
Ge and this quantity is a property that is common to the atoms Si and Ge. Their values ИB = 0.0586(26) and 0.0562(29) are identical within their standard errors and yield a mean of 0.0574(28). The value for H2C
C
C is certainly not identical to those for M = Si and Ge as shown in Fig. 9. Perhaps, this result is to be expected, given that the environment of the all the group 14 atoms C, Si and Ge in the Lewis bases in Fig. 9 consists of two single bonds at an angle of ∼90–110 degrees and, when the HX molecules are included, is in a trigonal environment. On the other hand, in the H2C
C
M molecules, the tetrel atom is in a diagonal environment, created by a double bond on one side and the HX molecule on the other side. The non-bonding pair on M is also in close contact with the π electrons in these molecules. It is not clear why the gradient for the H2C
C
C⋯HX graph is different from those with M = Si or Ge, but perhaps there is a stronger interaction between the axial non-bonding electron pair of C and the π-electron system than occurs with Si or Ge. It is interesting to note, however, that the value ИH2C
C
C = 0.0353(13) is identical (within standard errors) with those values of 0.0349(17) and 0.0337(18) obtained38 by similar means for hydrogen bonds to the C atoms in OC, SC, and SeC and HNC, CH3NC, and FNC, respectively.
![]() | ||
Fig. 12 D e/c versus EHX for the complexes cyclo-(CH)2(NH)2M⋯HX (M = C and Si; X = F, Cl, Br, I, CN, CCH, and CP). |
![]() | ||
Fig. 13 −De/σaxialversus EHX for the complexes cyclo-(CH)2(NH)2M⋯HX (M = C and Si; X = F, Cl, Br, I, CN, CCH, and CP). |
Fig. 12 reveals that the nucleophilicity of the NHC molecule is three times that of its Si analogue, a ratio that is higher than that observed for other R2M⋯HX series. Fig. 13 leads to the reduced nucleophilicities of 0.0388(11) for NHSi⋯HX and the higher value of 0.0483(9) for NHC⋯HX, indicating that the conflation of values is not as good as those reported in Fig. 9. The first value of the gradient ИNHSi falls within two standard errors of the mean of those in Fig. 9, but that for NHC⋯HX is somewhat higher. Whether it is significantly higher is not immediately clear and caution is necessary. First, there are only four different HX molecules involved, instead of the normal seven and moreover two of these points are essentially identical. Second, the small data set probably means that the standard error for ИNHC is too low. It is noted that there is a range of ∼0.01 in the ИB values as shown in Fig. 9.
The results for the nucleophilicities are summarized in Table 2. These measure the propensity of the tetrel atoms involved to engage in hydrogen bonding to HX molecules. It is noted that for a given tetrel atom M, the order of the nucleophilicities for the R2M carbenes is as follows: (CH3)2M > H2M > F2M, a result consistent with the accepted order of the inductive effects of the groups CH3, H and F. The order across the (CH3)2M row in Table 2 is M = C ≫ Si ∼ Ge ∼ Sn; there are indications in the other R2M rows that this is also true, even though the remaining rows are incomplete. The entries in Table 2 for cyclo-(CH)2M and H2CC
M, respectively, reveal a similar pattern, while, for a given M, the nucleophilicity of the carbene for cyclo-(CH)2M is greater than that of H2C
C
M. Evidently, in passing from row 1 to row 2 of the Periodic Table, there is a large drop in the nucleophilicity of the tetrel atom in these carbenes, but the changes from rows 2 to 3 to 4 are much smaller. (CH3)2M has the largest nucleophilicity for a given M, followed by cyclo-(CH)2M and H2C
C
M. It has also been demonstrated that the carbenes investigated here exhibit the phenomenon of reduced nucleophilicity when each point on the straight line from the Deversus EHX plot is divided by the value of the MESP on the 0.001 e Bohr−3 iso-surface on the C2 symmetry axis at the tetrel atom. In the present example, it appears that the reduced nucleophilicity is independent not only of the tetrel atom that participates in the hydrogen bond, but also of the remainder of the carbene molecule, at least for the R2M and cyclo-(CH)2M, which have a mean value ИB of 0.0417(16). This seems not to be the case for the H2C
C
M carbenes which have the somewhat larger value of 0.0530(26) (based on only the Si and Ge values, however). H2C
C
C is different. See Fig. 11 and associated discussion.
Carbenes | M = C | M = Si | M = Ge | M = Sna |
---|---|---|---|---|
a As indicated in Table 1, the axial MESPs of the Sn-based carbenes discussed are low or even positive and as a result precluded the analysis being applied to complexes involving F2Sn, cyclo-(CH)2Sn and H2C![]() ![]() |
||||
H2M | 6.36(12)b | 2.71(7) | 2.35(7) | 1.99(7) |
F2M | 3.39(26) | 0.93(11) | −0.39(2)c | — |
(CH3)2M | 9.41(22) | 4.05(18) | 3.44(9) | 2.89(16) |
cyclo-(CH)2M | 7.71(20) | 2.02(5) | 1.37(6) | — |
H2C![]() ![]() |
5.93(22) | 1.19(5) | 0.90(5) | — |
cyclo-NHM | 9.86(18) | 3.38(9) | — | — |
A further property of interest in connection with the reduced nucleophilicity ИB of a Lewis base B, such as the H2M discussed here, and its counterpart the reduced electrophilicity ΞHX of a Lewis acid is that they provide a route to the dissociation energy De from the properties of the separate component molecules. It was shown in ref. 21 that
De = {σmax(HX)·σmin(B)}·ИB·ΞHX | (2) |
To illustrate the use of eqn (2) in this context, Fig. 14 shows a graph of De values (as calculated by eqn (2)) plotted against the ab initio calculated values of De for 49 complexes H2M⋯HX, (CH3)2M⋯HX, where M = C, Si, Ge and Sn. The F2M⋯HX were excluded for reasons already discussed, as were the (CH3)2C⋯HX because only 4 points are available in Fig. 6 and there is a large intercept on the De/c axis. The mean value of ИB = 0.0417 for the 10 carbenes involved in Fig. 9 was used, while the ΞHX values are those listed in Table 2 of ref. 21.
![]() | ||
Fig. 14 Graph of De values calculated by eqn (2) for the complexes R2M⋯HX (R = H, CH3; M = C, Si, Ge, Sn; X = F, Cl, Br, I, CN, CCH, CP) versus De values calculated ab initio at the CCSD(T)F12C/cc-pVDZ-F12 level. |
Finally, the series of complexes H2C⋯HX have been a part of the main investigation, even though the electronic ground state of H2C is a triplet. However, the ab initio calculation for H2C referred to the closed shell version, that is the electronic singlet state, which is higher in energy than the triplet. The value of σaxial for singlet H2C is in Table 1. Fig. 9 establishes unambiguously that for singlet H2C the value of the reduced nucleophilicity is ИB = 0.0421(11), which is identical with the mean 0.0417(16) of the 10 values available from Fig. 9. This seems reasonable, as all the carbene molecules in Fig. 9 have singlet electronic ground states, even though all have different electronic energies.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d4cp03894k |
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