Qi
Zhang
a,
Yitong
Zhu
a,
Yisheng
Xu
a,
Huaiyu
Yang
*b,
Wei
Li
b and
Xiangyang
Zhang
*a
aState Key Laboratory of Chemical Engineering, East China University of Science and Technology, Shanghai, 200237, China. E-mail: zxydcom@ecust.edu.cn
bDepartment of Chemical Engineering, Loughborough University, Loughborough, LE11 3TU, UK. E-mail: h.yang3@lboro.ac.uk
First published on 26th March 2025
Identification of the polymorphism of a medicine is critical for its pharmaceutical properties. Different thermal properties and solubilities indicate different polymorphs. However, in the case of lenalidomide (LDM) hydrate, crystals with different thermal and solubility properties were determined to have an identical crystal structure. LDM, a drug for multiple myeloma and myelodysplastic syndrome, was found to form two dihydrate crystals. The stick-shaped crystals, E1, exhibit a two-step dehydration process, while the rhombic prism-shaped crystals, E2, show a one-step rapid dehydration process. E1 and E2 also showed different dissolution rates. However, powder XRD patterns of E1 and E2 were identical, and their crystal structures were confirmed as identical by single-crystal XRD. Further, investigation into the arrangement of water molecules showed that E1 and E2 contained features of both channel and isolated site hydrates. Water channels parallel to the c-axis were discovered in the hydrated structure, and two dehydration mechanisms were proposed based on the grinding experiments and lattice orientation analysis. E1 and E2 were mainly dehydrated along and perpendicular to the water channels, respectively. In addition, dehydration kinetics and the solid-phase transformation of E1 and E2 were determined.
Thermal dehydration of hydrate crystals is considered a solid-phase reaction,13,14 and studying it provides insight into hydrates. Hydrates can be characterized by powder X-ray diffraction (PXRD) and single-crystal X-ray diffraction (SCXRD) to determine the structural information and by thermogravimetric analysis (TGA) and differential scanning calorimetry (DSC) to assess the thermal properties such as melting, dehydration, and transformation.15 For different types of hydrates, the dehydration mechanism has mainly been determined through a combination of structural analysis and computational simulations.16,17 Kang et al. investigated the effect of particle size on hydrates, where narrow and staggered water dehydration channels in the crystal lattice were related to the dehydration process. The dehydration mechanism was confirmed through crystal orientation analysis and slip plane calculations.18 The dehydration kinetic model and dehydration activation energy are also critical in exploring the dehydration mechanism,19,20 and the Flynn–Wall–Ozawa (FWO) method is a model-free method to provide detailed information on different stages of the dehydration process.21,22 Additionally, density functional theory (DFT) and molecular dynamics (MD) simulations have been employed as emerging methods to provide insight into the dehydration properties of hydrates.23–25
Lenalidomide (LDM, CAS No. 191732-72-6), a medicine to treat multiple myeloma and myelodysplastic syndrome,26,27 has poor water solubility with commercial application in the hemihydrate of form B.28 LDM is a typical polymorphic drug system, including nearly 20 forms of LDM and LDM solvates, such as form I,28,29 forms II and III,30 forms A–H,31 and forms 1–7,32 with form 1 as a thermodynamically stable polymorph and form 4 as a metastable polymorph. In addition, two new dihydrates of LDM have been reported.32,33 Some investigations have reported the physicochemical properties and nucleation behaviors of LDM polymorphs.34–36 However, the dehydration mechanism and dissolution properties of LDM hydrates have not been studied.
In this work, LDM dihydrate crystals E1 and E2 have two different shapes. TGA and DSC curves show that the dehydration processes and thermal properties of crystals E1 and E2 are different, and they have different solubilities and dissolution rates. However, the powder XRD of crystals E1 and E2 are almost the same, with almost identical crystal structures determined by SCXRD. The mechanisms of the different dehydration processes were investigated, and the hydrated structures and dehydration models of E1 and E2 are discussed.
Bulk crystals of E2 were obtained by adding LDM raw material into a 1 v% phosphoric acid–water mixed solvent to get a saturated solution at 40 °C, then rapidly cooled to 0 °C at 300 rpm for 2 h. The homogeneous saturated solution at 40 °C was slowly cooled to 0 °C and aged to obtain single crystals of E2.
The thermal properties of the LDM hydrates were measured by differential scanning calorimetry (DSC, TA Q2000) and thermogravimetric analysis (TGA, TA Q500). For DSC, 3–5 mg samples were placed in a crucible with a small hole and then heated from 30 °C to 300 °C at 10 K min−1 with a nitrogen flow rate of 50 mL min−1. For TGA, 5–10 mg samples were placed in a crucible with a nitrogen flow rate of 50 mL min−1, and the operating temperature range was set between 30 °C to 350 °C at 10 K min−1 for hydrate characterization or 2, 5, 10, and 15 K min−1 for dehydration kinetics. Different batches of hydrate samples were measured for thermal properties to ensure objectivity.
The spectroscopic properties of the LDM hydrates were characterized by powder X-ray diffraction (PXRD) with a Bruker D8 Advance. Samples were placed in a diffractometer with Cu Kα radiation which collected the patterns in the range of 5–50° at a scanning rate of 10° min−1.
The structural details of LDM forms E1 and E2 were determined by single-crystal X-ray diffraction (SCXRD, Bruker D8 Quest). Single crystals were placed in a diffractometer with Cu Kα radiation at room temperature. Diffraction data were integrated and reduced by APEX3 software. The crystal structures were solved by the direct methods on Olex2 software37 and subsequently refined by F2 full-matrix least-squares with the SHELXL-2018/3 program. The crystallographic data in CIF format of forms E1 and E2 have been deposited in the Cambridge Crystallographic Data Center (CCDC) as No. 2289868 and No. 2383285, respectively.
0.5 mL samples were withdrawn at predetermined intervals and immediately filtered using a 0.22 μm syringe filter for subsequent high-performance liquid chromatography (HPLC) determination. The concentration of dissolved API was determined by HPLC (Shimadzu LC-20AT, Japan) with a UV detector at 220 nm. A Diamonsil C18 column was used at 40 °C. The mobile phase consisted of a mixture of acetonitrile and 0.05% phosphate buffer (15:
85, v/v) with a flow rate of 1.0 mL min−1. An injection volume of 10 μL was used for analysis. The recovered samples were also characterized using PXRD and DSC. All the experiments were conducted in triplicate to eliminate serendipity.
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Fig. 1 (a) SEM images, (b) powder dissolution profiles at 37 °C, and (c) TGA and DSC curves of LDM bulk crystals E1 and E2. |
The crystals E1 have higher solubility at 60 min than the crystals E2, as shown in Fig. 1b. Solutions with crystals E1 reach saturation around 60 min, reaching concentrations of 0.550 mg mL−1. Solutions containing crystals E2 reach a maximum concentration of 0.600 mg mL−1 around 60 min. PXRD and DSC at 60 min confirm that there is no polymorphic transformation for crystals E1 and E2 (detailed in Fig. S1†). The concentration of the solution with crystals E2 gradually decreases to 0.553 mg mL−1 at 120 min, approaching a similar solubility as the crystals E1. Both crystals E1 and E2 have faster dissolution rates and larger solubilities than the crystals of commercial hemihydrate form B during a 0–120 min period.
The TGA and DSC curves of the crystals E1 and E2 exhibit different thermal behaviors, as shown in Fig. 1c. In the TGA curves, the crystals E1 have a slow two-step dehydration process, showing weight losses of 9.2% and 2.7% corresponding to the removal of 1.5 H2O molecules (fast dehydration rate) and 0.5 H2O molecules (slow dehydration rate), respectively. The crystals E2 have a one-step process with a faster overall dehydration rate with a weight loss of 11.9%, but slower than the 1.5 H2O molecule dehydration rate and faster than the 0.5 H2O molecule dehydration rate in crystals E1. The TGA analysis confirms that the crystals E1 and E2 are both LDM dihydrates. The DSC curves present that crystals E1 and E2 have identical melting peaks around 269 °C, but different endothermic peaks before the melting points. The crystals E1 have two heat-absorption peaks at 97 °C and 167 °C before the melting point. The crystals E2 have a single peak at 113 °C before the melting point, corresponding to the one-step dehydration process. The endothermic peaks before the melting points of crystals E1 and E2 were related to the dehydration and polymorphic transformation processes, which are further analysed in the next section. The thermal properties of crystals E1 and E2 were also compared with those of commercial crystals B, as shown in Fig. S2.†
However, the changes of the PXRD patterns during dehydration are different. At room temperature, the PXRD patterns of crystals E1 and E2 are the same. With increase in temperature, the PXRD pattern of crystals E1 changes between 85 °C and 100 °C, corresponding to the first dehydration step in Fig. 1c, transforming to form B (Fig. 2b). The PXRD pattern further changes between 160 °C and 170 °C to metastable form 4 and stable form 1. This means that the peaks at 97 °C and 167 °C in the DSC curve of crystals E1 represent two different dehydration and polymorphic transformation processes. Comparatively, crystals E2 are dehydrated and transform to stable form 1 between 105 °C and 120 °C, as shown in Fig. 2c. It may be also possible that crystals E2 have an intermediate hydrated structure, but it was not observed due to the rapid transformation. The PXRD pattern of form 1 has no further change before melting, and the peak at 113 °C in the DSC curve of crystals E2 represents the thermal absorption caused by dehydration and polymorphic transformation. Forms 1, 4, and B have already been reported,28,32 and the polymorphic identification of crystals during dehydration is detailed in Fig. S3 and S4.†
The identical PXRD patterns of crystals E1 and E2 indicate that they are the same polymorph. However, they have different thermal stabilities and dehydration processes as measured by DSC and TGA, and the solid-phase transformation proved different polymorphic transformations during dehydration. SCXRD was used to determine the crystal structures of crystals E1 and E2 for evidence of polymorphisms. Table 1 shows the crystal structure information of LDM crystals E1 and E2, both exhibiting a monoclinic structure with space group P21/c. Each crystal unit cell has four LDM molecules and eight water molecules for both crystals E1 and E2, with nearly identical lattice parameters (all parameters with differences <0.25%). In addition, the bulk and single crystals were identified by PXRD as the same polymorph, as shown in Fig. S5.†
Parameters | E1 | E2 |
---|---|---|
Formula | C13H13N3O3·2H2O | |
Weight | 295.29 | |
Crystal system | Monoclinic | |
Space group | P21/c | |
a (Å) | 13.4400(3) | 13.4569(3) |
b (Å) | 8.8402(2) | 8.8327(2) |
c (Å) | 11.7381(3) | 11.7392(3) |
α (°) | 90 | 90 |
β (°) | 99.1610(10) | 99.2310(10) |
γ (°) | 90 | 90 |
Z, Z′ | 4, 1 | 4, 1 |
Volume (Å3) | 1376.84(6) | 1377.33(6) |
CCDC No. | 2289868 | 2383285 |
The molecular conformations of one LDM molecule and two associated H2O molecules from the crystal unit cells of crystals E1 and E2 were further analysed by Mercury Soft. Fig. 3a shows that the root mean square deviation (RMSD) of molecular overlap between crystals E1 and E2 is 0.0079, which also proves the identical molecular conformation for crystals E1 and E2. Also, both crystals E1 and E2 share an identical packing motif, illustrated in Fig. 3b. The absence of hydrogen bonding interactions between the LDM molecules is observed. However, the O–H⋯O hydrogen bond existing between the two water molecules acts as a bridge between the LDM molecules through the O–H⋯O and N–H⋯O hydrogen bonds to keep structural stability. The crystal structure analysis confirmed the same polymorph for LDM crystals E1 and E2. In addition, the water molecule interacts with adjacent water and LDM molecules by hydrogen bonds, and both H2O molecules in crystals E1 and E2 share two structural features of isolated site and channel hydrates, which is an uncommon hydrated structure. As the crystals E1 and E2 have the same crystal structure, it is expected that the simulated PXRD patterns of crystals E1 and E2 from the single-crystal structures are also identical, as shown in Fig. 2a.
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Fig. 3 (a) Molecular overlap and (b) packing motif of LDM and water molecules in the crystal unit cell of crystals E1 and E2. |
The ground crystals E1 and E2 have similar TGA and DSC curves, shown in Fig. 4d. Ground crystals E1 and E2 have identical dehydration peaks at 122 °C and melting peaks at 269 °C. The dehydration processes tend to be the same, with the loss of two water molecules in one-step amounting to about 11.9%. The ground crystals E1 and E2 exhibit faster dehydration rates, completing their dehydration process at 120 °C, which is faster than the one-step dehydration process of the unground crystals E2.
Fig. 5a shows the supercell structure of crystals E1 or E2 with multiple water channels along the c-axis. These water channels are perpendicular to the ab-plane and parallel to the c-axis, and their radial direction consists of four water molecules. In the ab-plane, both water channels and LDM clusters are arranged in a straight line, forming the blue hydrophilic layers and red hydrophobic layers, respectively, which are sequentially arranged in parallel to form a complete crystal structure. Based on this hydrated structure, there are two potential dehydration pathways for hydrated water molecules to leave the crystal structure.
The first pathway related to the dehydration of crystals E1 is represented by crystal face (0 0 1), shown in Fig. 5b. It is noted that crystal planes (3 0 0), (2 2 0), and (4 1 0) are similar to (0 0 1), as they are all parallel to the c-axis. At the beginning of dehydration, it is expected that water molecules leave the crystal structure along the water channels, which corresponds to the first dehydration below 100 °C in the DSC curve in Fig. 1c. Although the detailed dehydration process was not determined, it is possible that water molecules dehydrated along the water channels undergo a slower process of diffusion and leaving, while the LDM molecules that lose the water molecules experience collapse and rearrangement due to the presence of hydrogen bonding between the water and LDM molecules, hindering the release of water molecules inside the crystal structure. This explains why the crystals E1 transform to hemihydrates after the first dehydration in Fig. 2b.
The other dehydration pathway is the radial direction of water channels perpendicular to the c-axis related to crystals E2, for example, crystal face (1 0 0), shown in Fig. 5c. It is noted that the planes (3 1 −2) and (2 2 −2) are similar to (1 0 0), as they are all vertical to the c-axis. It is expected that the water molecules in the channels can leave the crystal structure at once, leading to a faster dehydration process. All water molecules are expected to leave the crystal structure in one step due to the absence of the limitation of the diffusion effect of water channels, consistent with the polymorphic transformation characterization of crystals E2 in Fig. 2c, where the LDM molecules are directly restructured into anhydrous without observing an intermediate hydrated structure. Despite no direct observation of these dehydration pathways and transformation processes, these hypotheses agree with the DSC, TGA and phase transformation results.
It has been demonstrated that the two dehydration pathways are consistent with the dehydrations of the two LDM dihydrates. Fig. 4b presents an overlay of the PXRD patterns of crystals E1 and E2, revealing five characteristic peaks with significant intensity differences (detailed in Table S2†) with their corresponding Miller indices labeled. Several researches have reported that the relative intensity of PXRD diffraction peaks reflects the preferred orientation effect of pharmaceutical solid forms.18,38,39 For crystals E2, the diffraction peaks labeled (3 0 0), (2 2 0), and (4 1 0), which are all parallel to the c-axis, show a significant increase in intensity, while those labeled (3 1 −2) and (2 2 −2), which are all vertical to the c-axis, have lower intensity. Therefore, the lattice orientation becomes stronger on the planes of (3 0 0), (2 2 0) and (4 1 0) parallel to the c-axis but weaker on the other planes perpendicular to the c-axis, indicating that crystals E2 tend to dehydrate in the radial direction of water channels, with a predominance of the second dehydration pathway. Crystals E1 have an opposite lattice orientation change to crystals E2 and therefore tend to dehydrate along the water channels with the first dehydration pathway. Although the crystal faces were not indexed and the dominant crystal surfaces were not identified, comparing the PXRD patterns of E1, E2, ground E1 and ground E2, these (3 0 0), (3 1 −2) and other planes indicate the difference of lattice orientation for E1 and E2, which could lead to the different dehydration processes.
The simulated PXRD pattern of crystals E2 was further calculated using Rietveld refinement with a March–Dollase parameter of 0.7 in Mercury Soft (see Fig. S6†), followed by analyzing the peak intensity changes of E2 in the (1 0 0) preferred orientation, as shown in Fig. 4c. The peak intensities of (1 0 0), (2 0 0) and (3 0 0) increase significantly, indicating that crystal E2 has a clear preferred orientation in (1 0 0). The (4 1 0) peak intensity also increases, corresponding to the higher peak intensity in (4 1 0) for the E2 bulk sample, which confirms that the preferred orientation is the reason why crystals E2 have a different dehydration path from crystals E1.
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The dehydration kinetics based on the FWO method were performed at the heating rates of 2, 5, 10, and 15 K min−1 using TGA determination, as shown in Fig. S7 and S8.† According to the TGA data, plotting logβ versus −457/RT at different dehydration fractions (α = 10–90%) can yield the Ea from the slope, as shown in Fig. 6. All the plots have a strong positive linear relationship (R2 > 0.99); the Ea of forms E1 and E2 at different α are reported in Table 2. The reaction sequence of the dehydration process can be determined qualitatively by the variation of the Ea with α. With increasing α, the values of Ea for crystals E1 tend to increase and then decrease, indicating that the reaction sequence is a multi-step competitive process complicated by diffusion, which is consistent with the pathway of diffusion and dehydration through water channels. For crystals E2, the values of Ea remain essentially constant within 10% ≤ α ≤ 40% and 50% ≤ α ≤ 90%, indicating that the reaction sequence is a simple first-order reaction, which corresponds to the dehydration pathway of removing all the isolated site type water in one step. The slight increase of Ea within 40% ≤ α ≤ 50% for crystals E2 may be due to the collapse of partial crystal structure during the dehydration process. Obviously, crystals E1 and E2 have different reaction sequences, confirming the different dehydration pathways.
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Fig. 6 FWO plots of log![]() |
α (%) | E a (kJ mol−1) | |
---|---|---|
E1 | E2 | |
10 | 53.64 | 62.07 |
20 | 75.43 | 61.72 |
30 | 95.02 | 61.90 |
40 | 101.83 | 62.75 |
50 | 98.39 | 73.39 |
60 | 91.55 | 74.78 |
70 | 81.71 | 74.55 |
80 | 67.02 | 73.71 |
90 | 47.07 | 72.63 |
There are reports on different dehydration rates due to lattice orientations,18,40,41 and it is reasonable to accept that exposing more water channels in the crystal would accelerate the dehydration process. However, to the best of the authors' knowledge, this is the first report to observe that lattice orientation would induce not only different dehydration rates but also totally different changes in the solid-state transformation which further induce different thermal properties during dehydration. The emergence of this uncommon phenomenon is attributed to the special hydrated structure of LDM dihydrate. The water molecule interacts with both adjacent water and LDM molecules through hydrogen bonding interactions in the crystal unit cell, matching the dual features of channel and isolated site hydrates, which results in the appearance of two different dehydration pathways influenced by the lattice orientation. Nevertheless, the question of why the departure of water molecules from crystals E1 and E2 causes the rearrangement of the crystal structure and the different restructuring processes occurring in crystals E1 and E2 still requires further investigation. Besides, both crystals E1 and E2 remain stable at room temperature, although they have different dehydration temperatures and thermal stabilities. E1 is considered more stable than E2 due to the higher solubility of E2 in the initial dissolution, as evidenced by the greater dissolution rate of E2 compared to that of E1. Therefore, crystals E2 are a promising alternative for solid form LDM.
The same crystal structures and polymorphs with different thermal properties and dissolution rates could be due to two distinct dehydration pathways for different lattice orientations in the presence of a specific hydrated structure. It is demonstrated that ground crystals E1 and E2 without the preferred orientations have the same thermal properties and dehydration processes. The two LDM dihydrates, identified as same polymorph, have different thermal and dissolution properties, highlighting the need for a better understanding of thermal properties and structural changes during the dehydration process.
Footnote |
† Electronic supplementary information (ESI) available. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d4ce00798k |
This journal is © The Royal Society of Chemistry 2025 |