Acyl migrations sensitive to supramolecular encapsulation

Oleksandra Lagerna a, Alexander Shivanyuk *a, Tetyana Kienko a, Svitlana V. Shishkina bc, Oleg Lukin a and Volodymyr Fetyukhin a
aI.F. Lab Ltd., Representative of Life Chemicals Inc. in Ukraine, 5 Academician Kukhar Str., 02098 Kyiv, Ukraine. E-mail: A.Shivanyuk@lifechemicals.com
bInstitute of Organic Chemistry, NAS of Ukraine, 5 Academician Kukhar Str.5, 02098 Kyiv, Ukraine
cSSI Institute for Single Crystals, NAS of Ukraine, 60 Nauky Ave, 61001 Kharkiv, Ukraine

Received 14th March 2025 , Accepted 23rd April 2025

First published on 25th April 2025


Abstract

Four isomeric resorcin[4]arene tetrabenzoates interconvert via reversible, base-catalysed acyl migrations. Extraction of solid Me4N+I into a chloroform solution of the isomers gradually shifts the equilibria towards the C2V-symmetric component due to the formation of highly stable hydrogen-bonded molecular capsules.


Dynamic covalent chemistry efficiently uses chemical equilibria and non-covalent interactions of multiple molecular modules for the synthesis of functional supramolecular and covalent aggregates.1 The present research has been undertaken to create tuneable dynamic systems via a combination of reversible chemical reactions with supramolecular encapsulation2 of a suitable thermodynamic template.

Readily available C2V-symmetric resorcin[4]arene3 tetraesters 1–34 (Scheme 1) seemed likely to undergo acyl migrations5 leading to three regioisomers 4, 5, and 6. Since tetrabenzoate 1a and tetraphosphate 2b form highly stable hydrogen-bonded dimeric capsules,6 their reversible acyl relocations were considered as unique dynamic covalent reactions sensitive to supramolecular encapsulations.


image file: d5cc01417d-s1.tif
Scheme 1 Compounds 1–7 and capsular ion pair Me4N+@12I. (i) DIDEA, DMSO-d6 or CDCl3; (ii) DIPEA, CDCl3 (liquid)/Me4N+I (solid); (iii) DIPEA, CDCl3 (liquid)/water (liquid); (iv) MeI, K2CO3, rt. The positions of characteristic protons are indicated with letters.

Herein, we report on previously unknown reversible, base-catalysed acyl migrations in resorcin[4]arene tetrabenzoates 1, which establish an equilibrium of all possible regioisomers 1, 4, 5, and 6 in chloroform and DMSO solutions. The equilibrium in chloroform can be gradually shifted towards C2V-symmetric components 1 by the addition of solid Me4N+I, which serves as a thermodynamic template for controllable self-assembly of supramolecular capsules Me4N+@12I.

We have discovered that the reaction of C2V-symmetric compounds 1a,b with MeI in the presence of K2CO3 (DMF, rt) affords C4-symmetric7 tetramethyl ethers 7a and 7b (Scheme 1) in 30 and 17% unoptimized yields. These transformations provided a convincing piece of evidence for the acyl migrations in 1a,b leading to at least C4-symmetric isomers 5a,b.

Slow crystallization of compound 7b from CH2Cl2/MeOH afforded diffraction quality crystals of 7b•CH2Cl2.8 Single crystal X-ray analysis unambiguously confirmed the chiral C4-symmetric structure and strongly pinched boat9 conformation of molecule 7b (Fig. 1). Accordingly, chiral HPLC analysis of compounds 7 revealed pairs of enantiomers (Fig. S1 of ESI).


image file: d5cc01417d-f1.tif
Fig. 1 Single crystal X-ray structure of 7b• CH2Cl2. Hydrogen atoms are not shown.

The 1H NMR spectra of compounds 7 (298 K, CDCl3) contain singlets at 6.4 and 6.8 ppm for the protons in positions 2 and 5 of the resorcinol fragments, and one set of signals for all other protons (Fig. S7 and S10 of ESI). This C4-symmetric pattern seems likely to reflect rather fast pseudo rotation9 of two equivalent C2-symmetric boat conformers similar to those found in the crystalline state (Fig. 1).

The addition of DIPEA to a solution of tetrabenzoate 1a in DMSO-d6 unleashes the benzoyl migrations to produce isomers 4a, 5a, and 6a (Scheme 1). The 1H NMR spectra (Fig. S12 of ESI) and HPLC-MS chromatograms (Fig. S3 of ESI) of the reaction mixtures change in time until the equilibrium is reached for 15% of 1a, 50% of 4a, 25% of 5a, and 10% of 6a (Fig. 2a and b). The 1H NMR spectra of the isomeric mixtures contain theoretically anticipated seven signals for the protons of the unacylated and monoacylated resorcinol fragments (Fig. 2a) which are NOESY assigned to 1a (H(a)), 4a (H(b), H(c), H(d)), 5a (H(e)) and 6a (H(f), H(g)). Accordingly, eight theoretically anticipated hydroxyl signals are attributed to H(h) (1a), H(i)–H(l) (4a), H(m) (5a), H(n), and H(o) (6a) (Fig. 2b). The equilibria in DMSO-d6 are characterized by apparent constants K1 = 3.3 (Δμ01 = −RT[thin space (1/6-em)]ln[thin space (1/6-em)]K1 = −0.7 kcal mol−1), K2 = 0.5 (Δμ02 = 0.4 kcal mol−1), and K3 = 0.2 (Δμ03 = 0.9 kcal mol−1) which indicate a slight thermodynamic favourability of isomer 4a. Both HPLC-MS and 1H NMR analysis reveal the initial formation of compound 4a, which converts then into isomers 5a and 6a (Fig. S3a and S12b of ESI).


image file: d5cc01417d-f2.tif
Fig. 2 Well-resolved parts of the 1H NMR spectrum for the equilibrium mixture of 1a, 4a, 5a, and 6a (400 MHz, [1a]0 = 15 mM, [DIPEA] = 60 mM, DMSO-d6) after 148 hours of the acyl migrations at 298 K (a, b) and the putative mechanism for the base-catalysed transesterification (c). The positions of the protons are indicated in the formulas of Scheme 1. All the signals are correlated with the resonance of residual water due to chemical exchange. Proximity NOESY correlations (ca. −14%): H(a)–H(h), H(b)–H(k), H(b)–H(l), H(e)5–H(m), H(f)–H(n), H(g)–H(o), H(c)–H(i), H(d)–H(j). Relative intensities of the signals correspond to the symmetries of the structures: H(a)[thin space (1/6-em)]:[thin space (1/6-em)]H(h) = 1[thin space (1/6-em)]:[thin space (1/6-em)]2 (1a), H(b)[thin space (1/6-em)]:[thin space (1/6-em)]H(c)[thin space (1/6-em)]:[thin space (1/6-em)]H(d)[thin space (1/6-em)]:[thin space (1/6-em)]H(i)[thin space (1/6-em)]:[thin space (1/6-em)]H(j)[thin space (1/6-em)]:[thin space (1/6-em)]H(k)[thin space (1/6-em)]:[thin space (1/6-em)]H(l) = 1[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]1 (4a), H(e)[thin space (1/6-em)]:[thin space (1/6-em)]H(m) = 1[thin space (1/6-em)]:[thin space (1/6-em)]1 (5a) and H(f)[thin space (1/6-em)]:[thin space (1/6-em)]H(g)[thin space (1/6-em)]:[thin space (1/6-em)]H(n)[thin space (1/6-em)]:[thin space (1/6-em)]H(o) = 1[thin space (1/6-em)]:[thin space (1/6-em)]2[thin space (1/6-em)]:[thin space (1/6-em)]2[thin space (1/6-em)]:[thin space (1/6-em)]2 (6a).

Expectedly, the acyl migrations described above occur also in tetrabenzoates 1b and 1c; however, tetraphosphate 2a and tetratosylate 3a do not isomerise under the same conditions for as yet unknown reasons. The HPLC-MS analysis detected no cross-acylation products in the mixed experiment 1a/1c/DMSO-d6 + DIPEA most probably due to the intramolecular mechanism of the acyl migrations between base-activated complexes I and III (Fig. 2c) via bridged, tetrahedral intermediate II.

The absence of the exchange NOESY cross-peaks between the signals of isomers 1a, 4a, 5a, and 6a at equilibrium indicates critically slow interconversion with k < 10−2 s−1μ > 20 kcal mol−1) at 298 K.10 Accordingly, kinetic HPLC-MS studies reveal that the disappearance of 1a is characterized by the initial pseudo-first-order rate constant k = 2.0 × 10−5 s−1μ = 24.3 kcal mol−1)11 at 303 K. The variable temperature HPLC-MS kinetic studies (Fig. S4 of ESI) revealed Δh = 15.1 kcal mol−1 and Δs = −30.5 eu between 303 and 318 K, which most probably reflect the association of 1a with DIPEA and conformational rigidification in the transition state.

The benzoyl groups of 1a migrate also in CDCl3 + DIPEA to produce 4a, 5a, and 6a as evident from time-dependent 1H NMR and HPLC-MS analysis of the reaction mixtures. The time-independent composition of the equilibrium mixture (Fig. 3a) at 298 K comprises 36% of 1a, 36% of 4a, 17% of 5a, and 11% of 6a, which correspond to K1 = 1.0 (Δμ01 = 0 kcal mol−1), K2 = 0.5 (Δμ01 = 0.4 kcal mol−1) and K3 = 0.3 (Δμ01 = 0.7 kcal mol−1).


image file: d5cc01417d-f3.tif
Fig. 3 The section of the 1H NMR spectrum of the equilibrium mixture of isomers 1a, 4a–6a (400 MHz, [1a]0 = 15 mM, [DIPEA] = 60 mM, CDCl3) at 298 K (a) and its change after the solid–liquid extraction of Me4N+I for 2 (b) and 8 (c) hours. The signals of Me4N+@1a2 I are marked with an asterisk.

Slow extraction of solid Me4N+I into the chloroform solution of 1a, 4a–6a gradually shifts the isomeric equilibrium towards the C2V-symmetric component 1a due to highly exergonic self-assembly of hydrogen-bonded molecular capsule Me4N+@1a2I (Scheme 1 and Fig. 3b, c). The composition of the equilibrium mixture can be varied simply by the decantation of solid Me4N+I, which instantaneously ceases the formation of the capsule and the shift of the equilibrium. The capsule is stable in the presence of DIPEA; however, it can easily be disassembled by CDCl3/water extraction removing the base and Me4N+ I to recover pure 1a and complete the cycle of the dynamic covalent reactions shown in Scheme 1. The equilibria of 1a, 4a, 5a, and 6a in DMSO-d6 + DIPEA are not affected by the addition of Me4N+I since hydrogen-bonded capsule Me4N+@1a2I is not assembled in such a highly polar and H-bond competitive medium.

Although compound 1a forms stable tropylium capsule C7H7+@1a2BF4 in CDCl3, the addition of solid C7H7+ BF4 to the solution of 1a, 4a, 5a and 6a leads to multiple unidentified compounds (Fig. S15 of ESI) most probably due to the reactions of the tropylium cation with DIPEA and isomeric resorcin[4]arene tetrabenzoates.12

New isomers 4a, 5a, and 6a were separated by preparative HPLC and characterized by NMR methods (Fig. S14, of ESI). The addition of DIPEA to CDCl3 or DMSO-d6 solutions of individual isomers 4a, 5a, and 6a initiated the acyl migrations resulting in the formation of 1a and eventually the identical equilibrium mixtures (see Fig. 2a, b and 3a).

To gain more insight into the driving forces of the described above acyl migrations we have carried out theoretical studies of compounds 1a, 4a, 5a, and 6a. The perfectly C2V-symmetric MMX13 energy minimized structure of 1a (Fig. 4) is deprived of intramolecular C[double bond, length as m-dash]O–H–O hydrogen bonds and exhibits four O[double bond, length as m-dash]C–O–H interactions (d = 3.49 Å) favourable for the acyl migrations. The energy-minimized structures of hydrogen-bonded solvates (1a, 4a–6a)•3DMSO•DIPEA, which are likely to be involved in the acyl migrations (Fig. 2c), have rather close calculated energies (ΔE = 0.1–0.7 kcal mol−1) lying within the range of experimentally assessed Δμ0 values (−0.7–0.9 kcal mol−1) in DMSO/DIPEA solution. Thus, simple modelling taking into account hydrogen-bonding solvation of the OH-groups reproduces the simultaneous NMR observability of 1a, 4a, 5a, and 6a.


image file: d5cc01417d-f4.tif
Fig. 4 MMX energy minimized conformation of 1a. Close O[double bond, length as m-dash]C–OH contacts are indicated by arrows.

In conclusion, C2V-symmetric resorcin[4]arene tetrabenzoates undergo reversible, base-catalysed acyl migrations to establish equilibrium with their C1-, C4, and Cs-symmetric isomers in chloroform and DMSO solutions. All four regioisomers interconvert slowly on the NMR time scale and are simultaneously detectable by NMR spectroscopy at ambient temperature. In the CDCl3 solution, the equilibria can gradually be shifted towards the C2V-symmetric component owing to the formation of the highly stable hydrogen-bonded dimeric capsular complex with Me4N+ I. This feature demonstrates the possibility for smooth regulation of covalent equilibria via their thermodynamic coupling14 with highly exergonic supramolecular encapsulation.

This work was supported by I. F. Labs Ltd (Internal grant 00050-z01737). We thank Dr Alexey Ryabitsky for measuring 2D NOESY spectra and Dr Kit Begemit for helpful discussions.

Data availability

The data supporting this article were included as a part of the ESI.

Conflicts of interest

There are no conflicts to declare.

Notes and references

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Footnote

Electronic supplementary information (ESI) available: Synthetic and analytical experimental details, and crystallographic information for compound 7b. CCDC 2386016. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d5cc01417d

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