Open Access Article
Shu Gaoac,
Jiahui Wangd,
Xiaonan Weiae,
Jun Wangac,
Yuanpeng Jiangac,
Boyu Tanaf,
Yeshan Qina,
Xiaoyang Zhug,
Ruihu Songa,
Chunrong Qu*a,
Kun Qian*a and
Zhen Cheng
*abc
aState Key Laboratory of Drug Research, Molecular Imaging Center, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China. E-mail: crqu@simm.ac.cn
bShandong Laboratory of Yantai Drug Discovery, Bohai Rim Advanced Research Institute for Drug Discovery, Yantai, Shandong 264117, China. E-mail: zcheng@simm.ac.cn
cSchool of Pharmacy, University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China
dTianjin University of Traditional Chinese Medicine, Tianjin 301617, China
eShandong First Medical University & Shandong Academy of Medical Sciences, Huaiyin District, No.6699, Qingdao Road, Jinan, 250000, Shandong, China
fSchool of Biomedical Engineering, ShanghaiTech University, Shanghai 201210, China
gSchool of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing 210023, China
First published on 24th September 2025
Small-molecule near-infrared (NIR) dyes have shown great promise in bioimaging and theranostics of diseases. Among them, D–A–D-structured molecules stand out because of their excellent photostability, second near-infrared window (NIR-II, 1000–2000 nm) emission, and large Stokes shifts, offering significant imaging advantages and application potential. However, compared to conventional BODIPY and cyanine-based dyes, D–A–D molecules are generally uncharged and exhibit poor solubility, which limit their further application in biological systems. To date, systematic studies on the photophysical properties of charged D–A–D molecules have remained scarce. Considering the importance of structural modulation, a detailed investigation of their optical properties is of great significance for rational design of practical and high-performance dyes. In this study, two groups of D–A–D-type small-molecule dyes were rationally designed and synthesized based on a donor–acceptor engineering strategy. The influence of charge incorporation on their photophysical properties was systematically evaluated. Among them, SMIC-10004 exhibited excellent optical stability, good polarity, and favorable NIR-II emission characteristics. Based on this, an acid-responsive nanoprobe, SMIC-10004 NPs, was constructed using mPEG-Hyd-DSPE to enhance accumulation in the tumor microenvironment. In vivo experiments demonstrated that SMIC-10004 NPs enabled high-resolution and long-term NIR-II imaging, and the nanoparticles significantly inhibited tumor growth under laser irradiation, showing superior photothermal therapeutic efficacy with good biocompatibility. Overall, this study not only provides valuable guidance for the rational design of charged D–A–D dyes, but also presents a promising platform for NIR-II-based theranostic applications.
Phototheranostics offers advantages such as non-invasiveness, convenience, and low risk9 and has emerged as a research hotspot in recent years. The performance of near-infrared photothermal agents and photosensitizers largely determines the therapeutic outcomes.10,11 Therefore, the development of next-generation near-infrared dyes is of great significance for advancing phototheranostics. Common NIR fluorescent small-molecule scaffolds include cyanines, rhodamines, diketopyrrolopyrroles, BODIPYs, squaraines, and donor–acceptor–donor (D–A–D) systems.12–15 Among them, D–A–D dyes possess excellent photostability and large Stokes shifts.16 One of the key features of D–A–D architectures is the use of rigid, strongly electron-deficient acceptor cores to facilitate efficient charge transfer. Benzo[1,2-c:4,5-c′]bis([1,2,5]thiadiazole) (BBTD) is one of the most classical electron acceptors, well known for its strong electron-withdrawing capability.17 Notably, the first reported NIR-II dye, CH1055, was constructed based on the BBTD core.18 However, its synthesis can be challenging. In comparison, the 6,7-diphenyl-[1,2,5]thiadiazolo[3,4-g]quinoxaline (TQX) core features lower synthetic complexity and greater chemical stability,19 making it a promising alternative for imaging and photothermal therapy. To date, numerous NIR-II probes have been designed and used in the diagnosis and treatment of various diseases.20–22 NIR-triggered theranostic agents have already demonstrated great potential for treating deep-seated diseases.23,24 Several studies have examined dye design and performance enhancement from structural and aggregation perspectives.25,26 However, comprehensive studies on the physicochemical properties of D–A–D dyes remain limited.
Incorporating charged moieties not only enhances intramolecular charge transfer and modulates absorption and emission profiles, but also increases molecular polarity and dispersibility in aqueous environments, thereby improving the biocompatibility and biological application feasibility.27,28 Previous studies showed that the negatively charged intracellular environment attracts positively charged molecules,29 and cationic groups facilitate subcellular targeting, as seen in mitochondria-targeting probes with lipophilic cationic structures.30 Recently, cationic groups like quaternary ammonium and pyridinium have been incorporated into donor or acceptor units to enhance the dye performance,31 but most studies remain limited to the visible or NIR-I region. Currently, cationic NIR-II probes are mainly limited to cyanine, BODIPY, and rhodamine derivatives, whereas cationic D–A–D-type molecules have rarely been reported. Systematic studies on the influence of charge position and density on NIR-II dye properties remain scarce. Quaternized pyridine forms a stable pyridinium ion under physiological conditions and serves as a conjugated unit in D–A–D structures, making it a useful scaffold for designing positively charged NIR-II probes and studying structure–property relationships in biomedical imaging and therapy.
In this study, based on BBTD and TQX scaffolds, we thus employed a donor–acceptor engineering strategy to construct two groups of neutral and positively charged D–A–D molecules, aiming to investigate the impact of cationic modification on their photophysical properties and theranostic potential. These molecules maintain high structural rigidity and extended π-conjugation. With similar donors, TQX exhibits red-shifted absorption and emission and higher photothermal conversion efficiency compared with BBTD, indicating its promise as a photothermal agent. Compared with some currently available theranostic agents, SMIC dyes exhibit better photostability, larger Stokes shifts, and broader emission bandwidths, which are conducive to improving the theranostic performance. Meanwhile, the incorporation of charged groups could enhance their solubility in aqueous media. This approach holds promise for guiding the rational design of next-generation dyes with superior performance and tailored biological functionalities. To further evaluate their in vivo applications, D–A–D dyes were encapsulated using mPEG-Hyd-DSPE, enabling prolonged blood circulation and pH-responsive behavior in acidic environments. This strategy enhances tumor accumulation and ultimately yields a theranostic agent capable of long-term imaging in vivo.
The normalized absorption and emission spectra of the synthesized compounds were recorded in dichloromethane (DCM). As shown in the spectra (Fig. 1c). SMIC-10001 exhibited a maximum absorption at 664 nm. Owing to the strong electron-accepting ability of the BBTD core, its emission spectrum extended beyond 1000 nm. Methylation of SMIC-10001 yielded the cationic analogue SMIC-10002, which displayed hypsochromic shifts of 23 nm and 25 nm in absorption and emission maxima, respectively, while maintaining a comparable Stokes shift. In parallel, SMIC-10002 showed markedly improved solubility in polar solvents. Whereas SMIC-10001 was readily soluble in DCM but poorly soluble in methanol, SMIC-10002 was soluble in methanol and remained dispersible in 1% DMSO solution. Keeping the donor segments constant, the central acceptor of SMIC-10001 was replaced with TQX, yielding SMIC-10003. Compared with SMIC-10001, this structural modification extended the π-conjugation, resulting in a red-shifted absorption of 77 nm, while the emission wavelength remained nearly unchanged, leading to a reduced Stokes shift (Fig. 1d). This observation suggests that the BBTD unit in SMIC-10001 possesses stronger electron-withdrawing capability than TQX, leading to a greater HOMO–LUMO energy gap. Following the same methylation strategy, SMIC-10004—the cationic analogue of SMIC-10003—was synthesized. Interestingly, SMIC-10004 exhibited a blue-shifted absorption peak at 717 nm but a red-shifted emission peak at 980 nm, resulting in a significantly larger Stokes shift. Methylation broadens the absorption spectrum of SMIC-10004 relative to SMIC-10003, but no such effect is observed between SMIC-10002 and SMIC-10001. It is speculated that the spectral broadening of SMIC-10004 compared with SMIC-10003 is mainly attributed to its lower solubility in DCM (all absorption spectra were recorded in DCM). The poorer solubility likely induces slight aggregation in solution, leading to the observed broadening. In contrast, SMIC-10001 and SMIC-10002 exhibit better solubility in DCM and thus no obvious spectral broadening is observed. Additionally, SMIC-10004 demonstrated improved solubility in DMSO compared to its neutral counterpart SMIC-10003, further supporting the beneficial effect of cationic modification on polarity and solubility.
To explore the underlying photophysical mechanisms, density functional theory (DFT) calculations were performed using the B3LYP/6-31G(d) basis set combined with the SCRF solvent model. As shown in Fig. 1e, the spatial distribution and isosurface plots of the lowest unoccupied molecular orbital (LUMO) revealed that the LUMO was primarily localized on the central electron-accepting cores (BBTD or TQX). Upon extension of the conjugated system, both the LUMO and highest occupied molecular orbital (HOMO) energy levels increased, resulting in a narrowed energy gap (ΔE). In contrast, the introduction of positive charges through methylation enlarged the overall energy gap (ΔE), which corresponded well to the observed hypsochromic shift in the absorption spectra.
Fluorescence quantum yield (QY) is a key parameter in evaluating the photoluminescence efficiency of dyes. Although SMIC-10001 and SMIC-10002 exhibited absorption peaks at around 660 nm, their emission extended into the NIR-II region, making the selection of appropriate QY reference standards challenging. However, SMIC-10003 and SMIC-10004 exhibited strong absorption at 808 nm with NIR-II fluorescence emission, showing similar spectral characteristics to IR-26. Consequently, we employed the widely adopted IR-26 (QY = 0.05%) as the reference dye to determine the relative QY of SMIC-10004, which was found to be 0.462% (Fig. 1c). Although the QY under excitation at different wavelengths may vary, due to the lack of a suitable reference standard, SMIC-10004 was selected as the reference compound with an assumed QY of 0.462%. This approach enabled a qualitative comparison of the QY of the aforementioned dyes to a certain extent. The relative QY values of SMIC-10001, SMIC-10002, and SMIC-10003 were measured as 1.035%, 0.665%, and 0.476%, respectively. Interestingly, despite its more extended conjugation, the TQX-based compound exhibited a lower QY compared to its BBTD counterpart. Furthermore, across different structural frameworks, methylation consistently led to a reduction in QY, which may be attributed to the altered excited-state energy landscape resulting from the hypsochromic shift in absorption.
Polyethylene glycol (PEG) modification is an effective strategy for improving the aqueous solubility of positively charged therapeutic agents and shielding their surface charge, thereby enhancing their biocompatibility. However, the presence of PEG may hinder cellular uptake.32,33 To overcome this challenge, hydrazone (Hyd) offers an elegant solution: Hyd bonds remain stable at physiological pH but are readily cleaved under acidic conditions commonly found in tumor tissues or endocytic vesicles (pH ≤ 6).34 Thus, PEGylated materials linked via Hyd bonds achieve prolonged systemic circulation while enabling pH-responsive de-shielding of PEG in acidic microenvironments,35 thereby enhancing drug release and tumor-specific retention. We employed mPEG-Hyd-DSPE as the encapsulating material and used a self-assembly strategy to construct water-soluble fluorescent nanoprobes, successfully solving the issue of poor water solubility of the dyes. The resulting dye-loaded nanoparticles were named SMIC-10001 NPs, SMIC-10002 NPs, SMIC-10003 NPs and SMIC-10004 NPs, respectively. Their particle size measurements are shown in Fig. 2a and Fig. S15(a–c).
After encapsulation into nanoparticles, the fluorophores retained their characteristic NIR-II emission properties (Fig. S16). Compared with their unencapsulated forms, SMIC-10001 NPs and SMIC-10002 NPs exhibit red-shifted absorption and slightly blue-shifted emission peaks, while both the absorption and emission peaks of SMIC-10003 NPs and SMIC-10004 NPs show red shifts. These differences may arise from the enhanced polarity of the encapsulated environment, which stabilizes the ground state and induces red-shifted absorption. However, the alkyl substituents on the thiophene donors adjacent to the BBTD core in SMIC-10001 and SMIC-10002 introduce steric hindrance, thereby reducing effective conjugation and restricting structural relaxation in the excited state, ultimately leading to shorter emission wavelengths. By comparison, SMIC-10003 and SMIC-10004 maintain superior planarity and extended conjugation, which result in pronounced red shifts in both absorption and emission. During the encapsulation process, we observed an interesting phenomenon: under identical feeding ratio and sonication conditions, SMIC-10003 exhibited a significantly lower encapsulation efficiency. The resulting SMIC-10003 nanoparticles also showed larger hydrodynamic sizes, along with visible sedimentation of fine particles during static storage. In the post-processing steps, a large portion of oversized nanoparticles was removed by the filtration membrane, leading to substantial sample loss. Neither increasing the feeding ratio nor extending the sonication time resulted in notable improvements. In contrast, the positively charged SMIC-10004 demonstrated an encapsulation efficiency close to 100%. Repeated experiments consistently yielded nanoparticles with uniform size distribution and high colloidal stability (Fig. 2a and Fig. S15d, 17). These nanoparticles passed through filtration membranes without loss and remained stable without sedimentation over extended periods. This indicated a more controllable and reproducible nanoparticle formation process. It was thus considered that the introduction of positive charges enhanced intermolecular electrostatic repulsion, thereby suppressing probe aggregation and promoting better dispersion. This likely contributes to the formation of more stable and structurally favorable nanoparticles.
To further examine the role of acid-responsiveness, SMIC-10004 was encapsulated using either mPEG-Hyd-DSPE or mPEG-DSPE, yielding SMIC-10004 NPs and SMIC-10004 NPs-N, respectively. After nanoparticle formation, both formulations maintained the NIR absorption and emission properties of the parent fluorophore. The colloidal stability of these nanoparticles was evaluated in vitro under different pH conditions (pH 8.0, 7.4, 6.0, and 5.5) using dynamic light scattering measurements over 24 hours. The results revealed that SMIC-10004 NPs-N remained stable, whereas SMIC-10004 NPs showed signs of partial swelling and the emergence of smaller-sized nanoparticles (Fig. S18 and 19), suggesting that the hydrazone linker effectively responded to acidic environments.
Moreover, by fixing the concentration and varying the laser power density (0.25, 0.5, 0.75, 1, 1.25, and 1.5 W cm−2), a series of temperature curves were obtained (Fig. 2c), demonstrating a strong correlation between photothermal performance and either laser power or nanoparticle concentration. Higher laser intensity or increased NP concentration resulted in more intensive temperature elevation. The photothermal conversion efficiencies of SMIC-10001 NPs, SMIC-10002 NPs, SMIC-10003 NPs, and SMIC-10004 NPs were calculated to be 10.72%, 11.37%, 19.0%, and 18.51%, respectively (Fig. 2d). These results suggest that the TQX-based structures possess higher photothermal efficiency than their BBTD analogues, likely due to a more extended π-conjugation. In addition, the TQX core exhibits a more red-shifted fluorescence spectrum compared with BBTD, making it a more suitable candidate for photothermal agents. However, the introduction of positive charge appeared to have a negligible effect on photothermal performance. According to the vertical excitation energy (ΔES0–S1) results shown in Table S1, it can be observed that the differences after the introduction of positive charges are all less than 0.1 eV, indicating no significant changes. This suggests that the driving force for non-radiative transitions has not changed considerably, and therefore, no considerable variation in photothermal conversion efficiency is observed.
D–A–D-type molecules are generally known for their excellent photostability compared to cyanine-based dyes. Among the synthesized dyes, SMIC-10001 and SMIC-10002 exhibited strong absorption at 660 nm but relatively weak absorption at 808 nm. In contrast, SMIC-10003 and SMIC-10004 displayed strong absorption peaks at both 660 nm and 808 nm. The fluorescence intensity under both 660 nm and 808 nm excitation was tested to assess their photostability. Under 660 nm laser irradiation, the fluorescence intensity of ICG dropped to 25% within 55 minutes, whereas the SMIC dyes maintained nearly constant intensities (Fig. S24). Under 808 nm irradiation, ICG showed a rapid decrease in fluorescence, with complete quenching observed within 20 minutes. In contrast, SMIC dyes exhibited only a slight initial reduction followed by stable emission, indicating superior photostability (Fig. 2e). To evaluate thermal stability, five cycles of heating–cooling were conducted using SMIC-10004 NPs under 808 nm (1.0 W cm−2) laser irradiation (10 minutes, followed by natural cooling to room temperature). The temperature elevation profiles remained consistent across all cycles, confirming the excellent photothermal stability of SMIC-10004 NPs (Fig. 2f).
Furthermore, to assess the imaging performance of the dye, we used lipid emulsion to simulate different tissue depths. Owing to its broad NIR emission, SMIC-10004 NPs were tested with various long-pass filters (Fig. 2g). Remarkably, even at a simulated depth of 5 mm, the fluorescence signal remained detectable with discernible edges. Additionally, the signal-to-background ratio improved with longer filter cut-off wavelengths, highlighting the great potential of SMIC-10004 NPs for high-resolution in vivo imaging (Fig. S25).
Next, the cytotoxicity of SMIC-10004 NPs was assessed under both dark and irradiated conditions (Fig. 3b). In the absence of laser irradiation, SMIC-10004 NPs showed negligible cytotoxicity, maintaining high cell viability even at elevated concentrations. Upon exposure to an 808 nm (1.0 W cm−2) laser, however, a clear decrease in cell viability was observed in the SMIC-10004 NP-treated group. The photothermal-induced cytotoxicity exhibited a concentration-dependent trend; when the concentration reached 50 μM or higher, significant cell death was recorded, confirming the potent photothermal ablation effect of SMIC-10004 NPs upon NIR irradiation.
To further visualize the photothermal therapeutic effect, a live/dead cell assay using calcein-AM and propidium iodide (PI) was performed. In the control groups (PBS, laser only, or NPs without a laser), cells predominantly emitted green fluorescence, indicating good viability. In contrast, the cells in the “SMIC-10004 NP + laser” group showed strong red fluorescence, demonstrating effective photothermal destruction (Fig. 3c). These results confirm the promising photothermal therapy (PTT) capability of SMIC-10004 NPs against cancer cells under NIR laser irradiation.
To investigate the biodistribution of SMIC-10004 NPs, the mice were euthanized at 18 h post-injection, and the major organs and tumors were harvested for ex vivo imaging (Fig. 4d). Strong fluorescence signals were observed in the liver and spleen, likely due to nanoparticle accumulation through the reticuloendothelial system, which is commonly observed for nanomaterials. At 96 h post-injection, the fluorescence signals in most organs significantly decreased, suggesting that SMIC-10004 NPs were gradually cleared via hepatic and splenic metabolic pathways. These results demonstrate that SMIC-10004 NPs possess favorable tumor-targeting capabilities and excellent NIR-II imaging properties for in vivo applications.
Infrared thermal imaging showed that, under laser irradiation, the tumor in the SMIC-10004 NP + L group exhibited a rapid temperature increase of approximately 16 °C, significantly higher than the 8 °C rise observed in the PBS + L group (Fig. 5a). These results confirmed that SMIC-10004 NPs effectively accumulated in the tumor and converted light into heat, enabling localized and precise photothermal therapy.
Subsequently, the therapeutic efficacy was monitored for 15 days, with the tumor volume and body weight recorded every two days. As shown in (Fig. 5b), tumors in the PBS, PBS + L, and SMIC-10004 NP groups continued to grow rapidly, indicating negligible antitumor effects. In contrast, tumor growth in the SMIC-10004 NP + L group was significantly inhibited, with both the tumor volume and weight markedly reduced by the end of treatment. The tumor inhibition rate, calculated based on the excised tumor weights (Fig. 5c), reached 73.87%, demonstrating a significant antitumor effect (Fig. 5d). In addition, no significant differences in body weight were observed among the groups during the treatment period (Fig. 5e).
To further elucidate the antitumor mechanism, tumor tissues from each group were subjected to H&E staining, Ki-67 immunohistochemistry, and TUNEL apoptosis assays. The SMIC-10004 NP + L group displayed severe tissue destruction and necrosis, significantly reduced cell proliferation (Ki-67), and the highest level of TUNEL-positive apoptotic cells, confirming effective tumor ablation via photothermal therapy (Fig. 5f).
Additionally, potential long-term toxicity was assessed by serum biochemical analysis and H&E staining of the major organs (Fig. S26a and b). At day 7 post-injection, hepatic markers including aspartate aminotransferase (AST), alanine aminotransferase (ALT), and alkaline phosphatase (ALP) remained comparable to those in the PBS group, indicating no obvious liver damage. Renal indicators such as albumin (ALB), creatinine (CREA), and urea (UREA) were also within normal ranges, confirming minimal kidney toxicity. Leukocyte counts and the percentages of neutrophils, lymphocytes, monocytes, eosinophils, and basophils remained within normal ranges, with TNF-α at very low levels and IL-6 undetectable (Fig. S26c), reflecting the negligible immunotoxicity of SMIC-10004 NPs. Ex vivo fluorescence imaging of the major metabolic organs (liver, spleen, and kidneys) at 3, 7, and 14 days post-injection revealed gradual probe clearance (Fig. S26d), further demonstrating their favorable biosafety.
In summary, SMIC-10004 NPs not only offer effective NIR-II imaging capabilities, but also exhibit excellent photothermal therapeutic efficacy and biosafety in vivo, highlighting their potential as a promising nanoplatform for image-guided photothermal cancer therapy.
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