Cody W. Leasor,
Kelly L. Vernon
,
Yunong Wang
,
Reed E. Baker and
Lane A. Baker
*
Department of Chemistry, Texas A&M University, College Station, TX 77845, USA. E-mail: lane.baker@tamu.edu
First published on 8th July 2025
Rapid prototyping and 3D-printed devices have become important enabling technologies for measurement science. Work presented here aims to add to the 3D-printed toolset by demonstrating the economical production and application of printed centrifuge and electrode holders for micro and nanoelectrodes. These holders provide freedom of configuration and design and can also circumvent availability issues which may exist for commercial electrode holders. Here we demonstrate 3D-printed centrifuge holders which aid in filling small pipettes with fluid and 3D-printed electrode holders used both in electroanalytical probe characterization and in scanning ion conductance microscopy.
Commercial microelectrode holders, often used for electrophysiology and scanning ion conductance microscopy (SICM),29–31 can be purchased, but supply and configuration of holders are often limited. Commercial microelectrode holders are typically machined from polymeric materials (such as polycarbonate) in a traditional top-down machining approach. Variations in holder configuration can also complicate incorporation into hardware that mounts holders for applications (e.g. performing/setting up SPM experiments). With these aspects in mind, 3D printing is recognized as an approach to aid in fabrication of components to facilitate use of micro and nanoelectrodes.
Work described here adds to the rapid prototyping-based toolset for analytical chemistry through stereolithography (SLA) and masked-SLA (MSLA) 3D printing that aided in the development of single and theta barrel electrode holders with form factors inspired by previous commercial designs. The central body of single- and theta-barrel electrode holders are generated with two different 3D printing platforms (Phrozen Sonic Mini 8K and Formlabs Form2 3D printers) combined with simple hand tooling. Incorporation of ancillary off-the-shelf components are used to complete assemblies. Additionally, we detail “centrifuge holders”, which are adapters for filling pipettes via centrifugation, a valuable tool especially for filling small single-barrel pipettes. A key advantage of 3D printing electrode holders is the ability to generate additional configurations tailored to suit applications. Examples of this are demonstrated with holder designs that add a port to the body of the holder for pressure connections32,33 and that add additional connections for electrodes.
An Elegoo Mercury Plus post cure device was used to finalize the curing stage of the Phrozen prints. Resin manufacturers suggest 40 miuntes to 1-hour of UV exposure (at room temperature for Aqua Clear prints and at 70 °C for Rigid 10K prints) to fully cure, however, the long exposure to the UV light caused the clear-colorless prints to discolor, resulting in a yellow tint (Fig. S2a†). As a result, the post curing UV exposure was limited to 5 minutes, to prevent discoloration (Fig. S2b†), for the Aqua Clear prints. An attempt to find the minimal time needed to finish the post curing process before discoloration was performed. Longer cure times (e.g. 40- to 60 minutes, as suggested by manufacturer) were not employed, as these times led to discoloration. Of note, manufacturer curing times are approximate, and do not consider the intensity or configuration of specific UV-curing stations. In the procedures we employed, cure times of 5–10 minutes were found to provide suitable cosmetic properties and mechanical strength for pieces generated.
After curing, support structures were removed and any cosmetic issues were corrected (e.g., smoothing and/or flattening of surfaces by sanding/buffing, and occasionally re-threading via taps and dies). After corrections, if needed, a thin layer of resin was painted onto parts and cured for 5 minutes, to make the print more transparent (Fig. S2b†).
Coated silver wire (diameter of 0.005 inches (A-M systems, Sequim, WA)) was used as an electrode inside the pipette. To aid in electrical connection, the polymer coating on each end of the wire was mechanically sheared to expose 1–2 cm of the silver wire, on both ends. One of the exposed ends was soaked in 0.1 M FeCl3 and 0.1 M HCl for 6–8 hours and rinsed thoroughly with purified water (18.2 M cm). The Ag/AgCl wire was fed through the electrode holder and connections made with cold contact (mechanically forced electrical connection) between the micro-jacks and the wire that is compressed and sandwiched between the brass bolt and the rubber gasket as shown in the images in Fig. 2. The physical mechanism for this type of cold contact electrical connection is the bases for all electrode holders, commercial and fabricated like those shown in Fig. 1b.
The assembly was then gently tapped on the side of the pipette barrel to mechanically dislodge any gas bubbles. A thin piece of single-sided Scotch tape was placed tightly around the back of each pipette, to provide additional assurance pipettes would not slide out of centrifuge holders when centrifuging. A heuristic approach was performed by altering centrifugation time and speed such that minimal pipette breakage was observed while also giving reasonable responses to electrochemical measurements outlined in the following sub-section. These parameters are dependent on pipette geometry and solution viscosity and may need to be modified as needed. For pipettes employed here, an Eppendorf Mini-Spin centrifuge (Hamburg, Germany, motor radius of 6 cm) was employed to spin single barrel pipettes for 5 minutes at 8.6 thousand rotations per minute (krpm), or theta barrel pipettes for 7 minutes at 8.1 krpm (duration and spin rate vary based on dimensions of the pipette to be filled.)
The sample was then cured slowly overnight on top of a pre-heated oven at 120 °C. The PDMS mold was gently removed and placed into a 35 mm Petri dish where a small amount of uncured PDMS was painted on the edges of the sample to secure the mold to the Petri dish and left to cure at room temperature for 48 h. 0.2 V was applied to the pipette electrode with respect to a Ag/AgCl reference electrode that was also immersed into the electrolyte. Scanning was done at 2.0% threshold, 520 nm hop height, 30 μm × 30 μm scan area at 120 pixels × 120 pixels (250 nm per pixel resolution). Complete image collection for data shown required on the order of 50 minutes to complete. To minimize thermal drift, the probe was brought close to the sample surface and allowed to equilibrate thermally for 1–2 hours.36 During this time, the inverted microscope light source or lamp was turned off to remove a source of thermal drift and the lamp remained off during all scans.
After equilibration, the probe was repositioned to an area of interest and a hopping mode raster scan was employed to collect topographical data. After the first scan, the probe assembly was removed and the pipette was placed in the commercial holder and mounted into the instrument prior to repeating the sample approach, thermal equilibrating wait time, probe repositioning and finally scanning over the same area. Topographical maps were cropped (30 μm × 22.5 μm and 120 pixels × 90 pixels) to focus on the same number of the PDMS sample's features, limited by one image only showing five completely imaged features, instead of the intended nine. Additionally, these images were levelled by mean plane subtraction and the resulting Z-height values were adjusted via shifting minimum data value to zero. After processing images in the same manner, the resulting Z-coloring scale for each image was adjusted from 0 to 380 nm. Raw data prior to processing is shown in Fig. S6.†
Potentiometric-scanning ion conductance microscopy (P-SICM), detailed in previous publications,31,37,38 was performed on a polyimide membrane that was track-etched to have pores with nominal diameters of 2.5 μm. The membrane was encased in a tape mask that exposed a 1-mm-diameter circle from the sample center. The masked membrane was assembled in a perfusion cell29 with a 0.1 M KCl bath on both faces of the membrane. A Ag/AgCl working electrode was placed in the bottom chamber and a Ag/AgCl reference electrode and Pt counter electrode were placed in the upper chamber. A potential of 0.2 V was applied to the pipette electrode with scanning parameters of 2.0% threshold, 2 μm hop height. A 200 mVPP potential applied to the working electrode at a frequency of 5 Hz was used to generate potential gradients. SICM and P-SICM images were processed with Gwyddion and/or with a Python script.
The current–voltage (I–V) response of pipettes was measured via linear sweep voltammetry, with each pipette (or barrel) measured in triplicate. I–V Curves recorded were plotted as a function of potential with standard error represented as the error bars for each point in Fig. 3a. The average and standard error for each point in the plot was calculated from the 9 barrels (3 single barrel and 3 theta barrel pipettes contributing 3 and 6 barrels, respectively) at a 90% confidence interval (CI).
This measurement is often used to estimate the probe tip size (rtip) of single barrel (rtip(single)) and theta barrel pipettes (rtip(theta)) with back inserted electrodes. The inverse of the I–V curve's slope is the probe resistance (Rp), which can be easily calculated from the I–V curve response. We chose to measure current–voltage curves at concentrations relevant to the SICM experiments described here, which results in rectified current responses. When there is a rectified response, selection of data where minimal rectification occurs is optimal to estimate tip sizes based on the current–voltage response. Results from the linear equation and the observed rectified ion current as a function of absolute potential are shown in Fig. S5.† To estimate the pore size, values of ±0.1 V vs. Ag/AgCl were chosen where the ICRR effects are minimized. This potential window was used to calculate the inverse slope for each barrel's I–V curve. The equation used to estimate a single barrel's inner pipette tip size has been widely used in previous work37,39 and is represented in eqn (1). To a first approximation, theta barrel pipettes tip dimensions can be estimated by halving this relationship (eqn (2)).40
![]() | (1) |
![]() | (2) |
The solution conductivity (κ) and the pipette's half cone angle (θ/2) are also required to estimate the inner pipette tip size. Side view SEM micrographs of sister pipettes (one of the two halves pulled from the original capillary) can be used to obtain the half cone angle.41,42 In this respect, I–V curve data recorded from pipettes were collected (Fig. 3a), with their respective sister pipettes dedicated to SEM analysis (Fig. 3b and c left and right images).
The model to estimate the radius of the probe relies strongly on the conical taper at the end of the pipette tip. The majority of the resistance originates at the very tip of the pipette, and this region is where the half cone angle was measured (see Fig. S7†). The overall average half cone angle (both single and theta barrel probes) estimated was 6 ± 3°.
To validate the stability of single and theta barrel 3D-printed electrode holders for SICM measurements, pipette probes that were filled with 0.1 M KCl (same electrolyte and concentration as the sample's bath solution) and mounted in electrode holders were used to image the PDMS cast (Fig. 4b–d). Fig. 4b–d represents the topographical maps of the resulting square array regions, collected with commercial and fabricated (i.e., Phrozen and Formlabs 3D-printed electrode holder), respectively.
The topography maps collected with the commercial (Fig. 4b) and Formlabs 3D-printed holders (Fig. 4d) appear more similar to one another than the topography map collected with the Phrozen 3D-printed holder (Fig. 4c) (of note, in Fig. 4c contrast is higher due to a sample defect seen in the middle of the image). The overall height of features relative to the average base height is consistent in all topography maps. Lastly, the topography map in Fig. 4c exhibits significant lateral distortion causing the features to appear as rhomboids rather than the square-like features observed in the reference SEM micrograph of Fig. 4a or the control data shown as the topographical map of Fig. 4b.
Quantitative analysis of the data in Fig. 4a–d was done by obtaining horizontal and vertical profiles of the features, that were completely imaged in topography maps. These profiles were then averaged and their respective standard errors (90% CI at n = 5) were estimated for each of the electrode holders. Data was plotted as a function of distance and was overlaid with the averaged profile data obtained in the SEM image for the horizontal (Fig. 4e) and vertical (Fig. 4f) profiles. Fig. 4e shows the horizontal profiles plotted as a function of x-distance, where the largest deviation was caused by a single square extrusion having a surface defect shown as a concavity within apical plane of the top-middle feature found in Fig. 4c. This surface defect did not have an influence on the vertical profiles as a function of y-distance shown in Fig. 4f. Instead, the only deviation appears to be the width of the features collected with the Phrozen 3D-printed electrode holders. Further analysis of this data was done by taking the average height of the features' apical section along each profile, which was used as the peak value when calculating the features' FWHM values that represent their length and width. The resulting lengths of the features found in Fig. 4e were 5.24 ± 0.04 μm, 5.13 ± 0.03 μm and 5.21 ± 0.02 μm for the commercial and fabricated Phrozen and Formlabs 3D-printed holders, respectively. Whereas the resulting widths of the features found in Fig. 4f were 5.17 ± 0.07 μm, 4.49 ± 0.04 μm and 4.92 ± 0.06 μm for the commercial and fabricated Phrozen and Formlabs 3D-printed holders, respectively.
Feature dimensions in the SEM data, was used as a reference for comparing how well each electrode holder performed while scanning to produce the data in Fig. 4. The resulting percent error for the measured extrusions' dimensions with a probe mounted in the commercial electrode holder was 3% error along both the horizontal and vertical, an acceptable amount of error for this measurement. However, the percent error for the measured features' dimensions with a probe mounted in the Phrozen fabricated electrode holder was 1% error along the horizontal and an alarming −10% error along the vertical, which is most likely due to the cause of the distortions observed in Fig. 4c. Comparisons of these results relative to data taken with the commercial holder showed a percent error at 2% along the horizontal and 13% along the vertical, further highlighting the distortions in Fig. 4c from the data in Fig. 4b. Whereas, the percent error for the Formlabs fabricated electrode holder, relative to SEM data, was 2% along the horizontal and 2% along the vertical, which suggests the electrode holder fabricated from the Formlabs printer relative to the Phrozen 3D printer appears to have nominally higher accuracy in feature sizes imaged, taking the commercial holder as ground-truth. Comparing the Formlabs electrode holder data relative to the commercial electrode holder data, the percent error was 1% along the horizontal and 5% along the vertical, which continues to highlight the fact that imaging done with these two types of electrode holders are very comparable and produce similar data.
The cause of distortion in Fig. 4c was assessed to lateral drift. This was observed via optical microscopy with images taken before and after the scan relative to a defined position (refer to Fig. S8†). The recording of these observations of drift were part of the imaging protocol before and after each scan taken for each one of the electrode holders. Phrozen electrode holder exhibited the greatest drift compared to the other two electrode holders used to collect topographic data. The reason for the drift is assumed to be the only main difference between the electrode holders, which is the material that makes up their bodies. Commercial electrode holders are advertised as being composed from a variety of materials, including polycarbonate or acrylic materials (the material parameters that would most closely associate with thermal drift are thermal expansion coefficients). Formlabs provides a thermal expansion coefficient for the cured Rigid 10K resin of 41 × 10−6 °C−1 (within 0 to 150 °C). The Phrozen Aqua Clear resin does not have a published thermal expansion coefficient, but is advertised as being able to bend slightly, giving the impression that the thermal expansion coefficient is possibly higher than either of the other two materials. This would explain why the data obtained from the commercial and Formlabs 3D-printed electrode holders were comparable.
The 3D-printed holders were also employed in P-SICM, as shown in Fig. 5. Here a porous polyimide membrane separated the upper and lower chambers of a perfusion cell that are filled with the same electrolyte (0.1 M KCl). Topographical and local apparent conductance maps of micrometer-sized pores of the membrane were collected simultaneously. Fig. 5a shows the topographical map which clearly denotes that there are at least two complete pores visualized within this image. Fig. 5b presents the corresponding local apparent conductance map, with higher conductance values at or near the pores located in the topographical map, compared to values over the membrane.
Moreover, the electric field emanates beyond the physical dimension of the pore in the conductance map, which makes the pores appear larger than the size seen in Fig. 5a. This is observed as a broadened conductance spike over the pore which is caused by a small hop height relative to the physical radii of the pores.38,43 To further correlate the position of pores in Fig. 5a with the conductance measured in Fig. 5b, an overlaid image is shown in Fig. 5c. The data shown in Fig. 5c displays color gradient array of pixels along the lateral points of the scan that are positioned along the z-direction coordinating with the heights displayed in Fig. 5a and given a color that coordinates with the data in Fig. 5b. This clearly shows that the highest regions of the measured conductance are that over/into the pore with heights closer to 0 μm and regions of lower conductance were measured over the membrane where pores are not present. The evidence obtained from Fig. 5 demonstrates 3D-printed electrode holders can be used to obtain more than just traditional SICM topographic data and presents an avenue for others to further customize electrode holders to experimental needs.
Finally, consideration of the end application of 3D SLA printing by means of rapid prototyping devices should be made, as demonstrated in the case of SPM experiments where physical properties of the resin dictated quality of experimental results obtained. Solutions to problems, such as those addressed in this work, shows that some 3D printers and their respective resins may not be best suited for fabricating pivotal parts of SPM experiments. As printing technology advances, further exploration of the production quality more economical printers/resins that offer different material properties is an important avenue to consider. This could include printing the holders in glass.
Footnote |
† Electronic supplementary information (ESI) available: Raw data and CAD files. See DOI: https://doi.org/10.1039/d5ay00865d |
This journal is © The Royal Society of Chemistry 2025 |