Marco
Manenti
*,
Tommaso
Villa
,
Giovanni
Macetti
and
Alessandra
Silvani
Department of Chemistry, University of Milan, via C. Golgi 19, Milano, 20133, Italy. E-mail: marco.manenti@unimi.it; tommaso.villa7@studenti.unimi.it
First published on 14th February 2024
A one-pot protocol, consisting of a Pd-catalysed carboamination reaction, followed by N-deprotection and oxidative denitrogenation, has been developed for the synthesis of diversely substituted spirocyclopropyloxindoles, in yields up to 73% and with diastereoselectivity close to 1:
1. Readily accessible starting materials, mild reaction conditions, an easy to operate one-pot procedure and good functional group tolerance make this transformation a versatile tool for the synthesis of substituted spirocyclopropyloxindoles. This protocol successfully works on the gram-scale and allows access to both diastereoisomers separately. A plausible mechanism was proposed, and a series of post-transformations were performed on the obtained products, showing their remarkable synthetic versatility.
It is therefore not surprising that spirocyclopropyloxindoles are becoming increasingly relevant in drug discovery, and several compounds have already been established as reliable sources of new drugs (Fig. 1).9 Among these, CFI-400945 is a potent PLK4 inhibitor, which has entered phase I clinical trials for the treatment of breast cancer,10 while Sisunatovir is an orally bioavailable inhibitor of the respiratory syncytial virus.11 This class of compounds includes even anti-HIV, anti-obesity and different anticancer compounds.12
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Fig. 1 Examples of natural and synthetic spirocyclopropyloxindoles with relevant biological activities. |
Significant work has been done over the past few decades to discover viable synthesis methods of spirocyclopropyloxindoles, and the development of efficient and short routes to generate chemical diversity around this distinctive framework remains an active research field today. Most of the reported methodologies rely on the use of sulfur ylides, such as the recent protocol developed by Hajra and co-workers, in which isatin undergoes a domino Corey–Chaykovsky reaction to give unsubstituted spirocyclopropyloxindoles,13 and the protocols described by Feng and co-workers and by Yuan and co-workers, in which activated 3-alkenyl oxindoles undergo a formal [2 + 1] annulation with sulfur and sulfoxonium ylides, both by metal catalysis and under metal-free conditions.14,15 Besides sulfur ylides, phenyliodonium ylides can be employed as C-1 synthons in [2 + 1] annulations, as recently demonstrated by Feng and co-workers,16 as well as Morita–Baylis–Hillman carbonates, as reported by Warghude and co-workers.17 A domino reaction of M–B–H carbonates of isatins and sulfur ylides was exploited by Zheng and co-workers to synthesize complex oxospiro[bicyclo[3.1.0]hexane-6,3′-indoline] scaffolds.18 All these approaches require particularly activated 3-alkenyl oxindoles, such as conjugated ones, in order to give the target spiro derivatives, severely limiting the scope of these types of reactions.
A different strategy toward substituted spirocyclopropyloxindoles involves the use of highly reactive diazo compounds, again in combination with 3-alkenyl oxindoles, to perform a [3 + 2] cyclization followed by nitrogen elimination, as demonstrated by Maurya and co-workers19 and by Xiao and co-workers20 (Scheme 1, previous studies). However, diazo compounds have to be synthesized in situ due to their carcinogenicity and highly explosive nature, making the scale-up of the process troublesome and dangerous. Moreover, apart from the safety issues related to diazo compounds, spirocyclopropyloxindoles prepared in this way are always obtained as single diastereoisomers, according to the frontier molecular orbital theory and without the possibility of accessing alternative diastereoisomers.21 By reversing the substrates’ functionalities, Cao and co-workers demonstrated the application of 3-diazo oxindoles in a series of Hg(II)- or Au(I)-catalysed reactions with both electron-rich or electron-neutral olefins, achieving the desired spirocyclopropyloxindoles in good yields and with a broad range of different substituents,22,23 while Iwasa and co-workers performed the same transformation using a chiral Ru(II) catalyst.24 In a solvent and catalyst-free version, developed by Muthusamy and co-workers, 3-diazo oxindoles were heated directly in the presence of electron-deficient olefins,25 while a photochemical variation was described by Chen and co-workers.26 Since 3-diazo oxindoles are also carcinogenic and explosive,27 they must be handled with extreme caution and a blast shield must be used in all their reactions.
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Scheme 1 Target spirocyclopropyloxindoles: previous studies using [3 + 2] cyclization/ring contraction approaches and the new strategy herein reported. |
For various reasons, it is therefore worthwhile to develop new synthetic protocols that are mild, safe, broadly tolerant and capable of providing access to both diastereoisomers of the desired spirocyclopropyloxindoles.
In our previous work, we described an easy entry to spiropyrazolidinyloxindoles, exploiting a Pd(0)-catalysed carboamination reaction, which gives access to both separable diastereoisomers of the desired products in good yields and with high functional group tolerance.28 Now, we envisioned that such a transformation could be coupled with N-deprotection, mild N–N bond oxidation, nitrogen elimination and ring contraction, leading to the target spirocyclopropyloxindoles in a one-pot process starting from the readily available 3-allyl-3-hydrazinylindolin-2-ones (Scheme 1, this work). To the best of our knowledge, no similar one-pot strategy, involving such a mild oxidative denitrogenation step, has been described so far in the literature for the synthesis of related compounds.
While the allylation of 1a was already optimized in our previous work (Table 1, entry 1), the same conditions did not work for the related N-Cbz derivative 2a (entry 2), so alternative procedures were sought.
Entry | R | X | Solvent and conditions | Yieldb (%) |
---|---|---|---|---|
a Reactions were carried out with 1a (0.15 mmol) and allyl-X (0.30 mmol) in a solvent (1.5 mL) and 2a (0.15 mmol) and allyl-X (0.33 mmol) in a solvent (0.5 mL). b Isolated yields. | ||||
1 | Boc | Br | In powder, MeOH, 40 °C, 3 h | 93% |
2 | Cbz | Br | In powder, MeOH, 40 °C, 3 h | Traces |
3 | Cbz | Bpin | Ti(OiPr)4, THF, 40 °C, 3 h | Traces |
4 | Cbz | MgBr | THF, −78 °C to rt, 3 h | 48% |
5 | Cbz | Br | Zn powder, THF, 0 °C, 5 min | 92% |
The Brown reaction with allylboronic acid pinacol ester was not effective, even after the addition of the strong Lewis acid Ti(OiPr)4 (entry 3). Using the Grignard reagent allylmagnesium bromide, the target compound 4a could be obtained in 48% yield (entry 4). We were pleased to observe that a Barbier-type reaction, relying on activated zinc powder to form allylzinc bromide in situ, gave the desired product in 92% yield in only five minutes (entry 5).
Following the conditions reported in entries 1 and 5, respectively, a small library of different 3-allyl-3-hydrazinylindolin-2-ones 3 and 4 was prepared (Scheme 2). Apart from the sterically hindered 4-chloro derivatives, all the selected hydrazone substrates gave the corresponding products in good to excellent yields.
Next, we focused our attention on the one-pot conversion of allyl derivatives 3 and 4 to the desired spirocyclopropyloxindoles, envisioning nitrogen deprotection and subsequent N–N bond oxidation as the key steps after the Pd-catalysed alkene carboamination reaction (Table 2). In the model reaction, starting from compound 3a and 4-bromo-1,10-biphenyl as the reference aryl halide, the intermediate spiropyrazolidinyloxindole was achieved by reaction with Pd2(dba)3 as the catalyst, paired with X-phos, according to an optimised protocol that is able to drive the reaction towards the key intramolecular carboamination, rather than towards the competing intermolecular Heck reaction (see below, Scheme 7).28
Entry | Conditions 1 (N-Boc deprotection) | T (°C) | Conv.e (%) | Entry | Conditions 2 (oxidation)d | Conv.e (%) |
---|---|---|---|---|---|---|
a Reactions were carried out with 3a (0.10 mmol), Pd2(dba)3 (0.004 mmol), XPhos (0.016 mmol), tBuONa (0.13 mmol), and Br-biphenyl (0.13 mmol) in toluene (2.0 mL). b The volume of the added acid solution was equal to the starting volume of toluene. c TMSI (0.50 mmol) in MeOH (5.0 mL). d Oxidants (0.60 mmol) were used as a solid or added as an aqueous solution. e Determined by 1H NMR of the crude reaction mixture. f Not detected. | ||||||
1 | TFAb | 30 | 74 (8 h) | 5 | Pb(OAc)4 | Quant. |
2 | 4 N HCl aq.b | 30 | Traces (8 h) | 6 | KMnO4 (aq.) | Quant. |
3 | 4 N HCl in dioxaneb | 30 | 77 (3 h) | 7 | CuSO 4 (aq.) | Quant. |
4 | TMSI/MeOHc | 30 | n.d.f | 8 | AgOTf | 40 |
Instead of isolating, it was subjected to N-Boc deprotection in situ, evaluating a series of different protocols (conditions 1). Trifluoroacetic acid afforded the desired NH–NH pyrazolidine intermediate in 74% conversion, as detected by 1H NMR, but with a long reaction time (entry 1). Aqueous 4 N HCl was ineffective, probably due to the decreased solubility of the substrate in the biphasic reaction medium (entry 2), as confirmed by the good result conversely obtained using 4 N HCl in dioxane, which actually afforded the desired deprotected intermediate with a conversion of 77% in three hours (entry 3). However, the N-Boc deprotection was not achieved using trimethylsilyl iodide solution in methanol (entry 4). Next, a series of different oxidants were investigated for the following step. Besides Pb(OAc)4 and KMnO4 (entries 5 and 6), which proved to be effective, but are strong environmental pollutants, an aqueous solution of CuSO4 performed well, undergoing quantitative mild oxidation and ring contraction to afford the desired target 5a in a satisfactory 73% overall yield from precursor 3a (entry 7). Finally, AgOTf afforded the desired product with lower conversion (40%), probably due to the low solubility of the silver salt in the solvent (entry 8). It is noteworthy that, under the described conditions, the nitrogen elimination seems to be almost instantaneous after oxidation, preventing the observation of the intermediate spiropyrazolinyloxindole by TLC.
On the other hand, starting from the N-Cbz allyl derivative 4a, the alkene carboamination reaction was followed by N-Cbz deprotection by NH4(HCO2) in methanol and 10% Pd/C, and finally by CuSO4 oxidation, to afford the expected spirocyclopropyloxindole 5a, again by a one-pot procedure, in a comparable 67% overall yield (Scheme 3).
The availability of two classes of differently N-protected starting substrates (compounds 3 and 4) allows to select the best one-pot reaction conditions, on the basis of the different functional groups and substituents that are present on the entire molecule. This greatly increases the versatility of the protocol, as widely demonstrated by the substrate scope study that was carried out.
Hence, relying on the optimised conditions and starting from compounds 3a and 4a and various aryl and heteroaryl bromides, a library of different spirocyclopropyloxindoles was synthesized. In all cases, two diastereoisomers were formed in a ratio close to 1:
1. They can be easily separated by flash chromatography and were individually fully characterised by NMR spectroscopy and high-resolution mass spectrometry (HRMS) (Scheme 4, for the relative configuration assignment see later).
The protocol proved to be very suitable, tolerating both electron-rich (4-methoxy-phenyl) and electron-poor (4-nitro-phenyl) aryl bromides as reaction partners, although the presence of the nitro group slightly lowers the yield, due to non-investigated side reactions (5b and 5c). Sterically hindered naphthyl and mesityl bromides show similar reactivity in the one-pot process, affording the desired spirocyclic derivatives 5d and 5e in comparable yields. Pleasingly, the 2-bromo-6-phenylpyridine reacted smoothly to give compound 5f in good yield, demonstrating the applicability of the protocol to the synthesis of spirocyclopropyloxindoles containing pharmacologically relevant heterocycles. With R2 = vinyl, the reaction was effective, but the terminal double bond, inserted with the carboamination step, was reduced under the subsequent reaction conditions, so the final spirocyclopropyloxindole 5g, bearing a saturated alkyl chain, was recovered. A carbonyl group on the aryl bromide reagent was also found to be compatible with the reaction conditions (5h). 3-Bromo-chlorobenzene can be used as a reaction component, displaying both good reactivity and complete selectivity for bromide in the step of oxidative addition to Pd(0) (5i). 4-Bromo-N,N-dimethylaniline and 5-bromo-1-methyl-1H-indole do not react completely in the carboamination step, affording the corresponding cyclopropyloxindoles 5j and 5k only in moderate yields. Finally, 3-Br-thiophene was used and the corresponding product 5l was obtained in acceptable yield, but after a slightly longer reaction time.
Next, after the screening of aryl, heteroaryl and alkenyl bromides suitable for the reaction, we moved our attention to differently substituted oxindole precursors (Scheme 5).
With regard to R3, the reaction proceeded well with the bulky trityl (5m), while with R3 = Me, the overall yield decreased slightly (5n). Moving to R2, oxindoles bearing halogen substituents, both at positions C-5 (5o) and C-6 (5q), proved to be suitable substrates. The electron-rich 5-methoxy-oxindole substrate was observed to undergo minimal side reactions during the deprotection step, affording the corresponding product 5p in a slightly lower yield. On the other hand, the electron-withdrawing trifluoromethyl substituent at C7 was well tolerated and compound 5r was obtained smoothly. Finally, the 4-chloro-oxindole substrate afforded the undesired Buchwald coupling product 6 after the Pd-catalysed step, probably due to the steric hindrance near the carboamination reaction site.
To demonstrate the scalability and reliability of the process, a gram-scale synthesis of compounds 5a and 5m was performed. It afforded the desired products in comparable yields and diastereomeric ratios, despite requiring slightly longer reaction times for the deprotection step. It is worth underlining that the reported final yields, even if seemingly moderate, are actually highly satisfactory, representing the overall yields over three different reactions carried out as a one-pot process.
Since oxindoles bearing N–H are often more suitable for biological activity, with respect to the N-protected analogues, easy deprotection of compounds 5ma and 5mb was also demonstrated, allowing the achievement of compounds 7a and 7b in good yields. Compound 7b was also crystallized through slow evaporation from chloroform and subjected to single crystal X-ray diffraction analysis, which proved the relative configuration of the two stereogenic centers (Scheme 6).
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Scheme 6 Removal of the trityl group (left) and the asymmetric unit of compound 7b at 100 K (right). Non-H atom numbering scheme. Thermal ellipsoids of non-H atoms were drawn at the 50% probability level. The usual colour code was employed for atoms (grey: C; white: H; blue: N; red: O). For crystallographic details see the ESI.† |
With regard to the one-pot reaction mechanism, we have to consider the Pd-catalyzed carboamination and the subsequent ring contraction (Scheme 7). The mechanism of the first transformation is already described,29 and in our case, it relies on the known ability of the Pd2(dba)3 complex to reduce the rate of β-hydrogen elimination in the intermediate Pd(II)–σ-alkyl complex,30 driving the reaction towards intramolecular cyclization rather than the β-hydrogen elimination involved in the Heck reaction. To shed light on the ring contraction mechanism, the synthesis of the model compound 5a was carried out in the presence of TEMPO as the radical scavenger. Since the obtained yield does not differ from that in the absence of the radical scavenger, it is plausible to assume that the ring contraction involves a stabilized zwitterionic intermediate, rather than a di-radical species, as sometimes reported in the literature for similar denitrogenation processes31 (Scheme 7).
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Scheme 7 Pd-catalyzed carboamination reaction and ring contraction: plausible zwitterionic mechanism, in comparison with the di-radical alternative. |
To investigate the synthetic versatility of the obtained spirocyclopropyloxindoles, some post-transformations were evaluated. We considered first the amazing conversion of cyclopropyl rings into different heteroatom-containing five-membered rings via MgI2-catalysed [3 + 2] cycloaddition with carbonyl compounds and imines, described by Carreira and co-workers some years ago,32 and applied it to the synthesis of biologically relevant compounds, such as the alkaloids (±)-horsfiline,33 (±)-strychnofoline34 and (−)-rhynchophylline.35 However, this reaction, as well as the more recently described related methodologies,36 works only with activated donor–acceptor cyclopropanes, namely compounds endowed with a specific substitution pattern at the cyclopropane ring, where the combined effects of vicinal electron-donating and electron-accepting moieties allow for particularly mild, efficient, and selective transformations.
In our case, relying on molecules that lack suitable substitution for activating [3 + 2] cycloaddition pathways, a new rearrangement reaction was explored, taking advantage of the unique presence of a reactive benzylic methylene on the cyclopropyl ring. Starting from spirocyclopropyloxindoles 5 or 7, via reaction with MgI2 in combination with triethylamine hydrochloride, acting both as a magnesium-enolate quencher and an E2BC promoter, the ring opening was achieved, leading to the formation of unprecedented 3-substituted oxindoles (Scheme 8).
Indeed, triethylamine hydrochloride, as a proton source, drives the reaction towards the intermolecular quenching of the intermediate magnesium enolate and the subsequent elimination of HI, discouraging in this way the intramolecular iodide displacement, which would regenerate the starting three-membered ring and free MgI2. No reaction was observed when the temperature was decreased to 90 °C or in the absence of one of the two reagents. Under such conditions, four different spirocyclopropyloxindoles were converted into the corresponding 3-substituted oxindoles 8, without any significant difference in reactivity and with comparable yields.
The synthetic utility of compounds 8 was illustrated through two post-transformation reactions. By electrophilic fluorination, compound 8a was converted into the highly fluorinated derivative 9, whose chemical structure resembles that of the potassium channel modulator Maxipost. Compound 8b was indeed alkylated at C-3 to afford derivative 10, which was subjected to a photoinduced dearomative [2 + 2] cyclization, leading to the densely functionalized sp3-rich spiro tetracyclic compound 11 (Scheme 9).
The remarkable selectivity in the light-promoted cyclization step could possibly be related to the favourable π–π interactions between the aromatic rings of the molecule in the transition state. The relative configuration was assigned unambiguously by 2D-NOESY-NMR, and fully confirmed by single-crystal X-ray diffraction analysis (see the ESI†). It is noteworthy that compound 11 can likely be functionalized even further, exploiting both the aryl bromide for Pd-catalysed reactions and the easily deprotectable oxindole N-position.
Efforts to apply this protocol to the synthesis of spirocyclopropyloxindoles and derivatives within programs of drug discovery are currently underway in our laboratory.
Conditions B: in a round-bottom flask, the desired compound 1 or 2 (1.50 mmol, 1 eq.) and activated zinc powder (490 mg, 7.50 mmol, 5 eq.) were suspended in dry THF (4.5 mL, 0.33 M) and cooled to 0 °C. Allyl bromide (0.30 mL, 3.30 mmol, 2.2 eq.) was added and the reaction mixture was stirred at 0 °C for 5 minutes. Saturated aqueous NH4Cl solution (4.5 mL) was added at 0 °C and the reaction mixture was stirred for 30 minutes at room temperature; it was then extracted with ethyl acetate 4 times. The combined organic phases were dried over anhydrous sodium sulphate and the solvent was removed under reduced pressure. The crude reaction mixture was purified by FC (hexane/ethyl acetate) to afford pure compound 3 or 4.
Conditions A: HCl (4 N in dioxane, 5 mL) was added and the reaction mixture was stirred at 30 °C until the newly observed two spots disappear (monitored by TLC).
Conditions B: anhydrous, finely-ground, ammonium formate (1.58 g, 25.0 mmol, 100 eq.) was added, followed by dry methanol (15 mL) and 10% palladium on carbon (121 mg). The reaction mixture was stirred at 30 °C until the newly observed two spots disappear (monitored by TLC).
After that, copper sulphate pentahydrate (370 mg, 1.50 mmol, 6 eq.) was dissolved in water (3 mL, 0.5 M) and the solution was added to the reaction mixture. The reaction mixture was stirred at 30 °C for 2 hours; then the reaction was diluted with brine (50 mL) and extracted with ethyl acetate (4 × 50 mL). The combined organic phases were dried over anhydrous sodium sulphate and the solvent removed under reduced pressure. The crude product was purified by FC (hexane/ethyl acetate) to afford pure compounds 5, as diastereoisomer a (the second one to elute) and diastereoisomer b (the first one to elute).
The same procedure was applied for the gram-scale reactions.
Footnote |
† Electronic supplementary information (ESI) available: Copies of 1H NMR, 13C NMR and 19F NMR spectra of all new compounds, the 1H NMR and NOESY studies conducted on compounds 5, 7 and 11 and CIF files for compounds 7b and 11. CCDC 2307637 and 2307638. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d3ob02115g |
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