Hormoz
Pourtaher
a,
Yasaman
Mohammadi
bc,
Alireza
Hasaninejad
*a and
Aida
Iraji
*bc
aDepartment of Chemistry, Faculty of Sciences, Persian Gulf University, Bushehr, Iran. E-mail: alirezahasaninejad@gmail.com; a_hasaninejad@yahoo.com
bResearch Center for Traditional Medicine and History of Medicine, Department of Persian Medicine, School of Medicine, Shiraz University of Medical Sciences, Shiraz 7134845794, Iran. E-mail: aida.iraji@gmail.com; iraji@sums.ac.ir
cStem Cells Technology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
First published on 4th December 2023
Alzheimer's disease is a neurodegenerative disorder that impacts memory, thinking, and behavior, and currently, there is no effective cure available for its treatment. This study explored a one-pot strategy for synthesizing spiroindolinone-pyrazole derivatives through a sequential four-component condensation reaction. These derivatives were further investigated for their potential as anti-Alzheimer's disease agents. The developed synthetic procedure provides remarkable advantages, including a clean reaction profile, abundant starting materials, operational simplicity, and easy purification without traditional methods with good to excellent yields (84–96%). Next, the biological potencies of the newly synthesized spiroindolinone-pyrazole derivatives against AChE and BChE as Alzheimer's disease-related targets were determined. Also, the kinetic study and cytotoxicity of the most potent derivative were investigated. Furthermore, molecular docking and molecular dynamics evaluations were performed employing in silico tools to investigate the interaction, orientation, and conformation of the potent analog over the active site of the enzyme.
The pathogenesis of AD is still inconclusive and undefined, and different proposed mechanisms, including amyloid beta (Aβ), hyperphosphorylation of T-protein, protein deposits, oxidative stress, and metal dyshomeostasis, were defined. The consistent loss of cholinergic neurons and a considerable decline in choline acetyltransferase activity are the most prominent phenotypes of AD progression.3,4 As a result, cholinergic system dysfunction happens with synaptic damage accompanied by neuronal loss in the brain, particularly in the hippocampus and cerebral cortex.5
Acetylcholine (ACh) is known as one of the main neurotransmitters in the central nervous system (CNS), synthesized from acetyl coenzyme A and choline by the enzyme choline acetyltransferase. It regulates many processes, including memory, learning, attention, and behavior.6 In detail, ACh exerts excitatory effects at the neuromuscular junction by binding to either nicotinic or muscarinic ACh receptors, thereby initiating its action. The termination of ACh's activity within the synaptic cleft is facilitated by two primary cholinesterases (ChEs), namely acetylcholinesterase (AChE) and butyrylcholinesterase (BChE). These enzymes hydrolyze ACh into choline and acetate, halting synaptic transmission.7,8
The loss of cholinergic neurons and the reduction of ACh in patients with AD make AChE and BChE key therapeutic targets to modify the condition of the patients. It was reported that as the disease progresses, AChE activity decreases and BChE activity increases, making it an ideal target for the late stage of the disease.7 Approved ChE inhibitors are tacrine (withdrawal), donepezil, rivastigmine, galantamine, and huperzine A (approved by CFDA). However, these drugs are associated with severe side effects, including nausea, vomiting, diarrhea, muscle weakness, and weight loss. As a result, excessive efforts have been made to design novel Che inhibitors.9
Multicomponent reactions (MCRs) are versatile protocols in which multiple reactions are combined in one synthetic operation and are widely used to synthesize a variety of complex heterocycles and natural products.10 These reactions are characterized by convergence, ease of execution, efficiency, reducing waste, high yields, and atom economy.11,12 With the rising interest in generating heterocyclic compound libraries, exploring fresh multicomponent and synthetic reactions for academic and industrial research is an engaging research endeavor.
Pyrazolines are one of the important classes of nitrogen heterocyclic compounds, and their analogs are of great importance in medicinal chemistry.13–15 They are one of the groups of studied compounds among the azole family. Indeed, various synthesis methods and synthetic analogs have been reported over the years. The presence of the pyrazole core in different structures leads to various applications in different fields such as technology, agriculture, and medicine. These kinds of compounds possess a broad spectrum of biological activity, such as anticancer,16 antimicrobial,17 anti-inflammatory,18 anticonvulsant19 antitumor,20 and antiviral21 activities.
Isatin, also known as 1H-indole-2,3-dione, was initially synthesized by Erdmann and Laurent through the oxidation of indigo using nitric acid and/or chromic acid.22,23 Isatin and its derivatives occur naturally in certain plants like the Isatis genus, Calanthe discolor LINDL,24 and Couroupita guianensis Aubl.25 It has also been studied in the parotid gland of Bufo frogs.26 In humans, isatin is a metabolic byproduct of adrenaline.27–29 Isatin and its derivatives are fascinating and versatile building blocks widely used to synthesize important and bioactive heterocyclic compounds.30–35
The spirooxindole framework36,37 is a significant structural arrangement found in various bioactive natural compounds, including horsfiline, coerulescine, spirotryprostatin A, welwitindolinone A, elacomine, and alstonisine. Spirotryprostatin A, a natural alkaloid obtained from the fermentation broth of Aspergillus fumigatus, has been recognized as a new inhibitor of microtubule assembly. Additionally, pteropodine and isopteropodine have demonstrated the ability to regulate the function of muscarinic serotonin receptors38–40 (Fig. 1).
The significance of the indole core in medicinal and organic chemistry has led to a heightened focus on synthesizing oxo-indole derivatives. Various methods for crafting spiroxindole derivatives have been documented.41–44
Most of these synthetic routes can be categorized based on the following key reactions: (1) Mannich/Pictet–Spengler;45,46 (2) 1,3-dipolar cycloaddition;47,48 (3) Morita–Baylis–Hillman,49,50 intermolecular alkylation;51,52 (4) electrocyclization;53 (5) sigmatropic rearrangement reactions.54,55 For instance, Hongyu Guo and coworkers reported the synthesis of spirooxindole-pyrazolines and pyrazolones via P(NMe2)3-mediated substrate-controlled annulations of azoalkenes with α-dicarbonyl compounds.56 Assem Barakat and coworkers reported a new series of functionalized spirooxindoles linked with the 3-acylindole scaffold in methanol solvent.57 Alizadeh et al. have also reported the synthesis of these compounds using isatin derivatives, BMTN, ammonia, 1,3-dicarbonyl, and p-TSA as catalysts in water.19
In continuation of our research on multicomponent reaction and synthesis of spirooxindole derivatives and also considering the possible biological effects of pyrazoline and spiroxindole parts in an organic compound, synthesizing a series of new spiropyrazoline derivatives can be useful. In line with our ongoing interest in synthesizing biologically active heterocyclic compounds as anti-AD agents, we present a concise and efficient method for synthesizing novel spiro pyrazoline derivatives. This one-pot, sequential four-component synthesis involves the reaction of 1,1-bis(methylthio)-2-nitroethylene (BMTNE), arylamines, hydrazine hydrate, and isatine derivatives, all under catalyst-free conditions in EtOH at reflux. Next, all the derivatives were screened for their anti-AChE and BuChE activities. A kinetic study was also performed on the most potent compound against the respective enzyme. Molecular docking and molecular dynamics simulations were carried out on the active analogs to gain insights into the binding interactions. Furthermore, the neurotoxicity of these compounds was evaluated against the SH-SY5Y neuroblastoma cell line.
:
4, Rf = 0.272); IR (KBr): 3359, 3286, 3055, 2973, 1714, 1641, 1619, 1598, 1477, 1355, 1226, 1199, 1108, 1077, 871, 630; 1H NMR (300 MHz, DMSO-d6) δ: 10.60 (1H, s, NH), 9.90 (1H, s, NH), 7.64–7.52 (2H, m, Ar), 7.42–7.28 (3H, m, Ar), 7.22 (1H, td, J = 7.7, 1.2 Hz, Ar), 6.80 (1H, d, J = 7.8 Hz, Ar), 6.68 (1H, t, J = 7.6 Hz, Ar), 5.95 (2H, s, NH), 2.32 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.7, 159.0, 146.1, 143.7, 136.6, 133.5, 132.0, 131.1, 127.4, 127.1, 126.7, 126.4, 121.8, 117.6, 110.4, 71.6, 18.2; anal. calcd for C17H15N5O3: C, 60.53; H, 4.48; N, 20.76. Found: C, 60.88; H, 4.64; N, 20.93.
:
4, Rf = 0.269); IR (KBr): 3326, 3026, 3162, 1722, 1644, 1573, 1475, 1353, 1299, 1255, 1203, 1153, 1106, 877, 815, 626. 1H NMR (300 MHz, DMSO-d6) δ: 10.69 (1H, s, NH), 10.36 (1H, s, NH), 8.24 (1H, d, J = 7.5 Hz, Ar), 7.72 (2H, d, J = 8.2 Hz, Ar), 7.35–7.28 (3H, m, Ar), 6.97 (1H, t, J = 7.6 Hz, Ar), 6.88 (1H, d, J = 7.7 Hz, Ar), 5.89 (2H, s, NH), 2.35 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.7, 157.4, 145.7, 144.0, 136.4, 134.4, 132.4, 129.9, 126.6, 122.2, 121.5, 117.4, 110.7, 72.8, 21.0.
:
4, Rf = 0.265); IR (KBr): 3289, 3261, 3170, 3077, 2952, 1716, 1635, 1590, 1514, 1494, 1427, 1259, 1106, 1018, 941, 854, 800, 713; 1H NMR (300 MHz, DMSO-d6) δ: 13.42 (1H, s, OH), 11.27 (1H, s, NH), 10.86 (1H, s, NH), 8.22 (1H, d, J = 7.6 Hz, Ar), 7.45–735 (3H, m, Ar), 7.10 (1H, t, J = 7.6 Hz, Ar), 6.93 (2H, dd, J = 15.7, 7.7 Hz, Ar), 6.98–6.75 (3H, m, Ar), 6.17 (2H, s, NH); 13C NMR (75 MHz, DMSO-d6) δ: 163.0, 159.3, 151.7, 145.5, 142.9, 135.9, 134.3, 132.1, 129.6, 122.9, 122.5, 119.9, 117.1, 111.7, 74.9; anal. calcd for C16H13N5O4: C, 56.64; H, 3.86; N, 20.64. Found: C, 56.23; H, 3.65; N, 20.85.
:
4, Rf = 0.265); IR (KBr): 3293, 3218, 3075, 2971, 1716, 1645, 1508, 1477, 1334, 1218, 1108, 1068, 900, 815, 732; 1H NMR (300 MHz, DMSO-d6) δ: 10.65 (1H, s, NH), 10.32 (1H, s, NH), 8.19 (1H, dd, J = 7.7, 1.3 Hz, Ar), 7.78–7.67 (2H, m, Ar), 7.31 (1H, td, J = 7.7, 1.3 Hz, Ar), 7.10–7.05 (2H, m, Ar), 6.97 (1H, td, J = 7.6, 1.0 Hz, Ar), 6.86 (1H, d, J = 7.7 Hz, Ar), 5.86 (2H, s, NH), 3.82 (3H, s, OMe); 13C NMR (76 MHz, DMSO-d6) δ: 165.7, 157.5, 156.8, 145.3, 143.9, 132.2, 131.8, 126.7, 123.3, 122.2, 117.5, 114.6, 110.6, 72.7, 55.8; anal. calcd for C17H15N5O4: C, 57.79; H, 4.28; N, 19.82. Found: C, 57.85; H, 4.10; N, 19.88. Found: C, 57.53; H, 4.10; N, 19.66.
:
4, Rf = 0.268); IR (KBr): 3322, 3265, 3162, 3027, 1725, 1644, 1299, 1260, 1205, 1106, 813, 688, 625; 1H NMR (300 MHz, DMSO-d6) δ: 10.68 (1H, s, NH), 10.32 (1H, s, NH), 8.32 (1H, dd, J = 7.7, 1.2 Hz, Ar), 7.83 (1H, d, J = 2.3 Hz, Ar), 7.43–7.27 (2H, m, Ar), 7.23 (1H, d, J = 8.2 Hz, Ar), 6.96 (1H, td, J = 7.6, 1.0 Hz, Ar), 6.88 (1H, d, J = 7.8 Hz, Ar), 5.88 (2H, s, NH), 2.31 (3H, s, Me), 2.27 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.7, 157.6, 145.6, 144.0, 137.2, 136.6, 133.2, 132.4, 130.3, 126.5, 122.7, 122.0, 118.9, 117.4, 110.7, 72.8, 19.9, 19.4; anal. calcd for C18H17N5O3: C, 61.53; H, 4.88; N, 19.93. Found: C, 61.04; H, 4.56; N, 20.21.
:
4, Rf = 0.272); IR (KBr): 3361, 3288, 3170, 3075, 2977, 1722, 1640, 1600, 1523, 1482, 1336, 1228, 1130, 1073, 918, 835, 634; 1H NMR (300 MHz, DMSO-d6) δ: 10.70 (1H, s, NH), 10.40 (1H, s, NH), 8.24 (1H, d, J = 7.6 Hz, Ar), 7.81 (1H, s, Ar), 7.50 (2H, t, J = 7.8 Hz, Ar), 7.32 (1H, td, J = 7.7, 1.3 Hz, Ar), 7.24 (1H, t, J = 7.4 Hz, Ar), 6.95 (1H, t, J = 7.6 Hz, Ar), 6.88 (1H, d, J = 7.8 Hz, Ar), 5.90 (2H, s, NH); 13C NMR (75 MHz, DMSO-d6) δ: 165.6, 157.5, 146.1, 144.1, 138.9, 132.6, 129.5, 126.7, 125.1, 122.2, 121.6, 117.3, 110.8, 72.8; anal. calcd for C16H12ClN5O3: C, 53.72; H, 3.38; N, 19.58. Found: C, 53.49; H, 3.45; N, 19.25.
:
4, Rf = 0.269); IR (KBr): 3307, 3261, 3120, 3062, 2970, 1735, 1644, 1604, 1508, 1477,1388, 1245, 1216, 1184, 1066, 905, 845, 777, 628; 1H NMR (300 MHz, DMSO-d6) δ: 10.71 (1H, s, NH), 10.48 (1H, s, NH), 8.17 (1H, dd, J = 7.6, 1.2 Hz, Ar), 7.90–7.82 (2H, m, Ar), 7.60–7.54 (2H, m, Ar), 7.34 (1H, td, J = 7.7, 1.3 Hz, Ar), 7.01 (1H, td, J = 7.7, 1.1 Hz, Ar), 6.88 (1H, d, J = 7.7 Hz, Ar), 5.88 (2H, s, NH); 13C NMR (75 MHz, DMSO-d6) δ: 165.5, 157.2, 146.5, 144.2, 137.9, 132.7, 129.4, 128.7, 126.7, 123.0, 122.4, 117.2, 110.8, 62.5.
:
4, Rf = 0.255); IR (KBr): 3313, 3253, 3080, 2992, 1722, 1633, 1513, 1426, 1344, 1261, 1072, 850, 808; 1H NMR (300 MHz, DMSO-d6) δ: 10.47 (1H, s, NH), 10.27 (1H, s, NH), 7.53 (2H, d, J = 8.1 Hz, Ar), 7.25–7.19 (2H, m, Ar), 6.98 (1H, d, J = 2.4 Hz, Ar), 6.81–6.66 (2H, m, Ar), 5.68 (2H, s, NH), 3.88 (3H, s, OMe), 3.74 (3H, s, OMe); 13C NMR (76 MHz, DMSO-d6) δ: 177.7, 161.3, 155.6, 153.3, 150.6, 136.0, 135.0, 131.9, 124.7, 118.6, 116.7, 112.8, 110.7, 109.6, 60.6, 56.0, 55.9; anal. calcd for C18H17N5O5: C, 56.39; H, 4.47; N, 18.27. Found: C, 56.69; H, 4.41; N, 18.63.
:
4, Rf = 0.262); IR (KBr): 3345, 3288, 3166, 3096, 2992, 1722, 1644, 1608, 1504, 1357, 1292, 1236, 1201, 1139, 1020, 730, 568; 1H NMR (300 MHz, DMSO-d6) δ: 10.46 (1H, s, NH), 10.28 (1H, s, NH), 7.88 (1H, d, J = 2.6 Hz, Ar), 7.61 (1H, s, Ar), 7.48 (1H, dd, J = 8.1, 2.3 Hz, Ar), 7.20 (1H, d, J = 8.1 Hz, Ar), 6.91 (1H, dd, J = 8.5, 2.7 Hz, Ar), 6.77 (1H, d, J = 8.4 Hz, Ar), 5.87 (2H, s, NH), 3.59 (3H, s, OMe), 2.28 (3H, s, Me), 2.25 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.8, 157.7, 155.0, 145.8, 137.6, 137.4, 136.5, 133.4, 130.4, 122.9, 119.3, 118.0, 117.8, 112.9, 111.0, 72.7, 55.9, 19.8, 19.3; anal. calcd for C19H19N5O4: C, 59.84; H, 5.02; N, 18.36. Found: C, 59.21; H, 4.97; N, 18.66.
:
4, Rf = 0.272); IR (KBr): 3396, 3360, 3268, 1741, 1646, 1506, 1479, 1335, 1191, 1106, 1066, 898, 644; 1H NMR (300 MHz, DMSO-d6) δ: 11.35 (1H, s, NH), 10.10 (1H, s, NH), 8.92 (1H, d, J = 2.5 Hz, Ar), 8.22 (1H, dd, J = 8.7, 2.5 Hz, Ar), 7.73 (1H, d, J = 3.0 Hz, Ar), 7.14 (1H, d, J = 9.1 Hz, Ar), 7.03 (1H, d, J = 8.6 Hz, Ar), 6.87 (1H, dd, J = 9.0, 3.1 Hz, Ar), 6.04 (2H, s, NH), 3.88 (3H, s, OMe), 3.62 (3H, s, OMe); 13C NMR (75 MHz, DMSO-d6) δ: 165.8, 159.2, 153.6, 149.0, 145.3, 143.5, 142.4, 128.4, 127.0, 121.9, 117.2, 113.1, 111.4, 110.8, 110.6, 72.3, 56.1, 55.5; anal. calcd for C18H16N6O7: C, 50.47; H, 3.76; N, 19.62. Found: C, 50.68; H, 3.97; N, 19.21.
:
4, Rf = 0.270); IR (KBr): 3343, 3282, 3143, 2923, 1716, 1644, 1504, 1349, 1191, 1016, 887, 757; 1H NMR (300 MHz, DMSO) δ: 11.40 (1H, s, NH), 10.82 (1H, s, NH), 9.00 (1H, d, J = 2.4 Hz, Ar), 8.29–8.21 (1H, m, Ar), 7.91–7.80 (2H, m, Ar), 7.60–7.51 (2H, m, Ar), 7.04 (1H, d, J = 8.7 Hz, Ar), 5.92 (2H, s, NH); 13C NMR (75 MHz, DMSO) δ: 165.7, 158.9, 149.4, 143.9, 142.5, 137.3, 129.7, 129.3, 128.7, 123.4, 121.8, 116.8, 110.9, 72.9; anal. calcd for C16H11ClN6O5: C, 47.71; H, 2.75; N, 20.87. Found: 48.09; H, 2.62; N, 20.51.
:
4, Rf = 0.270); IR (KBr): 3315, 3289, 3162, 3052, 2960, 1712, 1641, 1550, 1348, 1297, 1249, 1114, 1031, 890, 817; 1H NMR (300 MHz, DMSO-d6) δ: 11.09 (1H, s, NH), 10.21 (1H, s, NH), 7.84 (1H, d, J = 7.6 Hz, Ar), 7.54–7.46 (2H, m, Ar), 7.44–7.31 (3H, m, Ar), 6.83 (1H, t, J = 7.8 Hz, Ar), 5.98 (2H, s, NH), 2.31 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 166.0, 160.1, 143.4, 140.5, 140.5, 136.4, 133.7, 131.2, 130.6, 127.5, 126.9, 126.6, 121.8, 119.0, 111.5, 111.0, 71.6, 18.1; anal. calcd for C18H14F3N5O3: C, 53.34; H, 3.48; N, 17.28. Found: C, 52.89; H, 3.30; N, 17.13.
:
4, Rf = 0.262); IR (KBr): 3396, 3366, 3265, 1731, 1646, 1508, 1475, 1332, 1191, 1108, 1066, 890, 634; 1H NMR (300 MHz, DMSO-d6) δ: 11.23 (1H, s, NH), 10.77 (1H, s, NH), 8.53 (1H, d, J = 7.6 Hz, Ar), 8.24 (1H, t, J = 2.0 Hz, Ar), 7.64 (1H, d, J = 8.1 Hz, Ar), 7.58–7.46 (2H, m, Ar), 7.34 (1H, dt, J = 7.2, 1.9 Hz, Ar), 7.16 (1H, t, J = 7.8 Hz, Ar), 5.92 (2H, s, NH); 13C NMR (75 MHz, DMSO-d6) δ: 165.8, 158.5, 152.3, 144.2, 141.3, 140.0, 138.1, 133.8, 131.3, 129.8, 127.1, 125.9, 125.0, 121.4, 120.1, 118.6, 72.7; anal. calcd for C17H11ClF3N5O3: C, 47.96; H, 2.60; N, 16.45; O, 11.27. Found: C, 48.55; H, 2.78; N, 16.79.
:
4, Rf = 0.265); 1H NMR (300 MHz, DMSO-d6) δ: 11.05 (1H, s, NH), 10.75 (1H, s, NH), 8.20–8.06 (2H, m, Ar), 8.02 (1H, d, J = 8.1 Hz, Ar), 7.79 (1H, d, J = 7.3 Hz, Ar), 7.72–7.56 (3H, m, Ar), 7.40 (1H, d, J = 8.1 Hz, Ar), 7.31 (1H, d, J = 7.6 Hz, Ar), 6.56 (1H, t, J = 7.8 Hz, Ar), 6.10 (2H, s, NH); 13C NMR (75 MHz, DMSO-d6) δ: 165.9, 160.6, 143.7, 140.5, 134.3, 133.9, 130.6, 128.7, 127.7, 127.0, 126.9, 126.0, 123.9, 123.5, 121.2, 118.7, 111.4, 110.9, 71.8; anal. calcd for C21H14 F3N5O3: C, 57.15; H, 3.20; F, 12.91; N, 15.87. Found: C, 57.44; H, 3.63; N, 15.88.
:
4, Rf = 0.282); IR (KBr): 3380, 3320, 3215, 3093, 2967, 1735, 1714, 1650, 1585, 1480, 1360, 1240, 1216, 1070, 934, 734, 588; 1H NMR (300 MHz, DMSO-d6) δ: 10.78 (1H, s, NH), 10.51 (1H, s, NH), 8.22 (1H, d, J = 2.2 Hz, Ar), 7.64 (2H, d, J = 8.2 Hz, Ar), 7.39–7.25 (3H, m, Ar), 6.85 (1H, d, J = 8.3 Hz, Ar), 5.90 (2H, s, NH), 2.35 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.4, 158.4, 144.6, 142.4, 137.7, 135.9, 135.0, 131.5, 129.9, 126.3, 126.0, 122.3, 118.5, 114.2, 112.0, 72.5, 21.1; anal. calcd for C17H14ClN5O3: C, 54.92; H, 3.80; N, 18.84. Found: 54.49; H, 3.82; N, 19.11.
:
4, Rf = 0.282); IR (KBr): 3378, 3338, 3261, 1741, 1716, 1650, 1481, 1334, 1194, 1097, 1068, 838, 694; 1H NMR (300 MHz, DMSO-d6) δ: 10.57 (1H, s, NH), 9.88 (1H, s, NH), 7.60 (1H, d, J = 7.6 Hz, Ar), 7.43–7.16 (4H, m, Ar), 6.80 (1H, d, J = 7.7 Hz, Ar), 6.68 (1H, t, J = 7.6 Hz, Ar), 5.95 (2H, s, NH), 2.32 (3H, s, Me); 13C NMR (75 MHz, DMSO-d6) δ: 165.7, 159.0, 146.1, 143.7, 136.7, 133.5, 132.0, 131.1, 127.4, 127.1, 126.7, 126.5, 121.8, 117.7, 110.4, 71.6, 18.2; anal. calcd for: C16H13N5O4.
Indolinone-bearing pyridine derivatives were designed (Fig. 2, compound B) as dual-binding inhibitors of AChE, and the most potent derivative was 32-fold more potent than donepezil as a reference drug.62 A library of indolinone-based hydrazinecarbothioamide derivatives (Fig. 2, compound C) was synthesized and tested for their anti-ChE activities in the past year. The most active analog exhibited Ki = 0.52 ± 0.11 μM with a selectivity of SI = 37.69 for AChE over BuChE.63 In another study, a series of benzyl-indolinones (Fig. 2, compound D) were designed using molecular modeling. In vitro evaluations exhibited significant inhibition of derivatives, in which the most potent analog exhibited more than 2-fold potency compared with donepezil.64 The structure–activity relationship (SAR) also demonstrated that substitution at the different positions of the indolidinone ring significantly affects the potency.
It has been reported in the literature that various compounds carrying the pyrazole skeleton have ChE inhibitory effects.65 Gutti et al. presented a linear pyrazole derivative as a ChE inhibitor (compound E). The most potent compound demonstrated significant inhibition of ChE activity and effectively reduced metal-induced aggregation of Aβ1–42 at a concentration of 20 μM. Furthermore, the compound exhibited a high cell viability of nearly 90%.66 A set of hybrid derivatives bearing a pyrazole and coumarin scaffold and the most potent entry, compound F, showed high potential AChE inhibitory activities with IC50 values of 4.41 ± 0.53 μg ml−1.67 Another study in 2020 reported that compound G was the most potent mixed-type inhibitor acting as a dual site inhibitor by occupying the CAS and PAS, which was further supported by enzyme kinetic study. The compounds did not show any cytotoxicity against HEK-293 cells.68 In a review, the limited SAR of pyrazole was developed, and it was exhibited that the smaller groups attached to the pyrazole ring promote ChE inhibition compared to bulky ones. Also, electron-withdrawing atoms increase activity.69
In light of this information, we aimed to develop and synthesize an efficient and convenient one-pot reaction of novel spiroindolinone-pyrazole derivatives in the present study. To investigate the structure–activity relationships (SARs) of ChE inhibition, a substituted phenyl ring (small ring) was coupled with the pyrazole group. Additionally, the designed scaffold featured a nitro moiety known for its strong electron-withdrawing properties, which could enhance interactions with the enzyme's binding site. This incorporation provided an added value to the scaffold, potentially contributing to increased potency in ChE inhibition. All the synthesized compounds were evaluated for their ChE activities, and the kinetic study of the most potent derivative was executed. In addition, docking studies and molecular dynamic simulations of the most potent compound were performed. The present work aimed to identify agents that may lead to further development as potential anti-Alzheimer drugs.
| Entry | Solvent | T (°C) | Yieldb (%) |
|---|---|---|---|
| a Reaction conditions: 2-methyl-N-(1-(methylthio)-2-nitrovinyl)aniline (1 mmol), NH2NH2 (80% aq.) (1.2 mmol), isatin (1 mmol), solvent 5 mL. b Isolated yield. | |||
| 1 | H2O | 80 | 25 |
| 2 | CH3CN | Reflux | — |
| 3 | THF | Reflux | 30 |
| 4 | Toluene | 80 | 45 |
| 5 | EtOH | Reflux | 93 |
| 6 | EtOH | r.t | 30 |
| 7 | EtOH | 40 | 55 |
| 8 | EtOH | 60 | 80 |
The scope and efficiency of the reaction were discovered using a range of structurally diverse aryl amine and isatin derivatives to form the corresponding products 5a–q.
With the optimal reaction conditions, the substrate scope of N-aryl-1-(methylthio)-2-nitroethenamine 3 and isatin derivatives 4 was investigated. As shown in Table 1, the results showed that various substituent groups of N-aryl-1-(methylthio)-2-nitroethenamine 3 usually had a slight effect on the yields, and we could not ascertain the effect of any specific substituent. All the N-aryl-1-(methylthio)-2-nitroethenamine substrates can be used in the reaction, producing compound 5 in good to excellent yields. The effect of substituted groups (R1) of isatins was also evaluated. The results revealed that different isatin substrates 4 could be transformed into the desired product 5 (Table 1). The substrates with electron-donating groups (R1 = OMe) or electron-withdrawing groups (R1 = Cl, Br, NO2, CF3) and isatin were well-tolerated during this transformation. The substrates with electron-donating groups usually provided the target compounds in higher yields than isatin or substrates with electron-withdrawing groups (Table 2).
According to a literature survey,71 a plausible mechanism for forming product 5 is shown in Scheme 1. The first synthetic pathway to produce 5 is initiated with intermediate 6 formed from the nucleophilic substitution of the NH2 group of arylamine and the NH2 group of the hydrazine molecule with two methylsulfanyl groups of BMTNE 1. Then, the one-component 1,1-enediamines 6 and the isatin derivatives 4 undergo an aza-ene reaction to give intermediate 7, resulting in the formation of product 5.
| Compound | R1 | R2 | AChE mean ± S.E | BChE | ||
|---|---|---|---|---|---|---|
| % inhibition at 50 μM | IC50 (μM) | % inhibition at 50 μM | IC50 (μM) | |||
| a Data presented here are mean ± S.E. b Positive control. | ||||||
| 5a | H | 2-CH3 | 35.38 ± 4.61 | — | 60.07 ± 4.62 | 19.95 ± 2.23 |
| 5b | H | 4-CH3 | 30.48 ± 5.82 | — | 56.49 ± 2.53 | 25.08 ± 1.59 |
| 5c | H | 4-OH | 40.96 ± 4.22 | — | 12.91 ± 1.79 | — |
| 5d | H | 4-OCH3 | 47.77 ± 3.29 | — | 53.35 ± 8.21 | 34.67 ± 3.68 |
| 5e | H | 3,4-diCH3 | 29.44 ± 3.89 | — | 31.08 ± 1.08 | — |
| 5f | H | 3-Cl | 75.47 ± 3.68 | 6.02 ± 2.59 | 13.94 ± 3.68 | — |
| 5g | H | 4-Cl | 13.95 ± 2.18 | — | 14.90 ± 5.73 | — |
| 5h | 5-OCH3 | 4-OCH3 | 29.74 ± 1.19 | — | Not active | |
| 5i | 5-OCH3 | 3,4-diCH3 | Not active | — | 52.29 ± 5.76 | 47.30 ± 5.75 |
| 5j | 5-NO2 | 2-CH3 | 71.57 ± 8.94 | 15.48 ± 2.69 | 38.94 ± 7.36 | — |
| 5k | 5-NO2 | 2,5-diOCH3 | 55.15 ± 6.84 | 42.55 ± 4.11 | 25.13 ± 1.58 | — |
| 5l | 5-NO2 | 4-Cl | 65.89 ± 4.73 | 37.15 ± 3.52 | 21.84 ± 2.10 | — |
| 5m | 7-CF3 | 2-CH3 | 63.13 ± 4.32 | 16.98 ± 2.43 | 37.53 ± 7.53 | |
| 5n | 7-CF3 | 3-Cl | 20.63 ± 1.57 | — | 18.8 ± 4.58 | |
| 5o | 7-CF3 | Naphtyl | 39.07 ± 4.73 | — | Not active | — |
| 5p | 5-Cl | 2-CH3 | 21.92 ± 1.71 | — | 73.76 ± 1.95 | 9.13 ± 1.82 |
| 5q | 5-Br | 2-CH3 | 51.76 ± 2.21 | 41.68 ± 6.93 | 34.00 ± 6.37 | |
| Donepezilb | 0.079 ± 0.05 | 10.6 ± 2.1 | ||||
Among 5a–e bearing H at the R1 position and an electron-donating group at R2, it was understood that 5d (R2 = 4-OCH3) recorded 47.77% inhibition at 50 μM and bioestric replacement of methoxy with hydroxyl resulted in 5c with a slight reduction in the activity (inhibition at 50 μM = 40.96%). Ortho (5a) and para methyl (5b) substitution, as well as 3,4-diCH3 (5e) substitution, did not significantly improve the activity compared with 5d. Contrarily, among analogs featuring halogen substitutions at the R2 position, the compound bearing a 3-Cl substitution at R2 (5f) demonstrated the highest potency, with an IC50 value of 6.02 ± 2.59 μM. However, when the substitution was shifted from the meta to the para position (5g), the potency considerably decreased to 13.95 ± 2.18% inhibition at 50 μM, indicating a significant deterioration in activity.
As can be seen in 5h and 5i, the introduction of 5-OCH3 as an electron-donating group at the R1 position, regardless of the type of substitution at R2, brought a reduction in the inhibitory activities compared to unsubstituted derivatives (5a–g; R1 = H).
A notable enhancement in potency was observed in compounds 5j, 5k, and 5l upon replacing the OCH3 group at the R1 position with the strong electron-withdrawing group NO2, possessing both resonance and inductive effects. Comparatively, these substitutions exhibited higher potencies than others at the same position. Additionally, the trend observed for R2 substitutions was as follows: 2-CH3 (5j, IC50 = 15.48 ± 2.69 μM) > 4-Cl (5l, IC50 = 37.15 ± 3.52 μM) > 2,5-diOCH3 (5k, IC50 = 42.55 ± 4.11 μM). This indicates that the presence of a methyl group at the 2-position (R2) resulted in the highest potency, followed by a chlorine substitution at the 4-position, while the presence of two methoxy groups at the 2 and 5 positions displayed slightly lower potency.
The trifluoromethyl (–CF3) group, one of the most powerful electron-withdrawing groups, was substituted at the 7 position of the indolinone ring (5m–o). Among –CF3 containing derivatives, 2-methyl substitution recorded better potency (5m; IC50 = 16.98 ± 2.43 μM) in comparison with chlorine (5n) as electron-withdrawing and naphthyl (5o) as bulk moieties.
It was observed that the presence of a 2-methyl group at the R2 position exhibited better potency when combined with electron-donating groups such as NO2 and CF3 at the R1 position. Building upon this observation, the 2-methyl moiety was retained, and chlorine (5p) and bromine (5q) halogen groups were introduced at the R1 position. Interestingly, the bulkier bromine moiety was more favorable than the chlorine group. This suggests that the size and steric properties of the substituents play a crucial role in the overall activity and interaction of the compound with the target site.
The results obtained from the investigation of compound 5h (R2: 4-OCH3) and compound 5i (R2: 3,4-diCH3), both possessing a 5-OCH3 substituent at R1, revealed that the introduction of the 3,4-diCH3 substitution resulted in a more potent BChE inhibitor with an IC50 value of 47.30 ± 5.75 μM. These findings suggest that increased lipophilicity, conferred by the 3,4-diCH3 substitution, improves BChE inhibition.
Relative to the activity of 5j–l with a 5-nitro substituent at the R1 position, similar to R1 = H derivatives, the introduction of 2-CH3 substitution increased the activity in comparison with 2,5-diOCH3 (5k) and 4-Cl (5l).
Among 7-CF3 containing derivatives (5m–o), similar results were recorded in which the 2-CH3 moiety was identified as a potent analog followed by 5n (R2: 3-Cl; 18.8% inhibition at 50 μM). Also, 5o was completely inactive.
Moreover, 5-Cl (5p) and 5-Br (5q) groups as halogen-substituted derivatives did function positively in the anti-BChE assay, and the best biological results were seen in 5p (R1: 5-Cl, R2: 2-CH3) with an IC50 value of 9.13 ± 1.82 μM.
First, the validity and reliability of molecular docking were assessed by redocking the AChE and BChE natural ligands inside the binding site of this relevant enzyme. RMSD less than 2 Å was recorded as the ideal value.
In the pursuit of identifying the most potent AChE inhibitor, compound 5f has emerged as the primary candidate, warranting further investigation. It is worth noting that 5f exists as an enantiomeric mixture, necessitating a comprehensive analysis of both its R and S isomers within the AChE active site. Molecular docking assessments were conducted on both the S and R enantiomers of compound 5f to elucidate their respective modes of action. This research aimed to uncover these enantiomers' binding orientations and poses within the AChE binding pocket. The results of the molecular docking calculations yielded significant insights. The S enantiomer exhibited a binding energy of −9.87 kcal mol−1, while the R enantiomer displayed a binding energy of −7.63 kcal mol−1. These findings were derived from a detailed examination of the binding interactions and their associated energetics within the AChE binding site.
The interactions of S and R isomers of 5f and in the AChE binding pocket are presented in Fig. 4 and 5, respectively.
The molecular docking study showed that the S enantiomer of 5f was appropriately oriented in the active site of AChE (Fig. 4). The indolineone moiety participated in H-bound interaction with Tyr124 (2.94 Å) and pi–pi stacking interaction with Trp86 (3.78 Å). Pyrazole recorded two H-bound interactions with Asp74 (2.60 Å) and Tyr337 (2.28 Å) and one pi–pi stacking interaction with Tyr337 (4.20 Å). The nitro moiety of 5f also participated in pi–cation interaction with Tyr341 (6.10 Å), and the 3-Cl substituted group displayed a halogen bond with Phe295 (3.51 Å).
On the other hand, the R isomer of 5f against the AChE binding site (Fig. 5) displayed notable interactions with key residues, including Phe295 (3.46 Å, halogen interaction), Ser203 (2.97 Å, hydrogen bond), Tyr341 (3.76 Å, pi–pi stacking), and His447 (4.10 Å, pi–cation) and His447 (4.36 Å, pi–pi stacking).
Furthermore, the molecular docking study results involving all derivatives against both AChE and BChE, along with details regarding the types of interactions and corresponding distances, were comprehensively presented in the ESI within Tables S1 and S2.†
To study the stability of the system's dynamic behavior, the best IFD pose of R and S enantiomers of compound 5f and apo enzyme was implemented to predict the motion of complex systems at an atomistic level. Root mean square deviation (RMSD) values indicate the conformational stability and perturbations of the system, and RMSD value changes around 1–3 Å are optimum values for small globular protein and the complex has reached equilibrium.21
The RMSD plot for AChE (in blue) displayed a notable initial increase followed by fluctuations around 1.5 Å. Meanwhile, the AChE-R isomer of complex 5f (in green) exhibited a slightly lower RMSD value of 1.2 Å. It is worth noting that the R isomer displayed comparatively lower stability. In contrast, the AChE-S isomer of complex 5f (in orange) displayed remarkable stability throughout the simulation, with an RMSD value of 0.7 Å maintained over the entire 100 ns duration.
These observations suggest that the simulation time employed was sufficient to attain an equilibrium structure during the simulations. Additionally, it appears that the S isomer exhibited greater stability compared to the R isomer (Fig. 6).
![]() | ||
| Fig. 6 RMSD values of the AChE-S isomer of complex 5f (orange), the AChE-R isomer of complex 5f (green), and AChE (blue) throughout the simulation time. | ||
RMSF values illustrate the protein backbone flexibility throughout the simulation time. Notably, the RMSF values indicate that the S isomer of compound 5f plays a substantial role in stabilizing crucial regions, including the PAS pocket (indicated by the blue dashed line), the catalytic triad (highlighted by the green dashed line), and the anionic subsite (represented by the red dashed line), as illustrated in Fig. 7.
![]() | ||
| Fig. 7 RMSF values of the AChE-S isomer of complex 5f (orange) and the AChE-R isomer of complex 5f (green) in angstroms throughout the simulation. | ||
Furthermore, the 2D interaction diagram of the S isomer of compound 5f in complex with the enzyme is depicted in Fig. 8. These interactions happened for at least 30% of the duration of the MD simulation time. Fig. 8 shows that the carbonyl oxygen of the indolinone moiety participated in two H-bound interactions with Tyr72 (32% of MD simulation time) and Asn87 (63% of MD simulation time) of the anionic subsite. Also, NH of indolinone interacted with Ser125 through hydrogen bonds for about 82% of the MD simulation time. The pyrazole ring demonstrated two H-bound interactions with Tyr337 (95% of the simulation time) and Tyr 341 (74% of the MD simulation time) of the PAS. Also, the 3-chlorophenyl group stabilized through hydrophobic π–π stacking non-bonding interaction by the Tyr341 residue for about 34% of MD simulation time. All these results aligned with the kinetic study confirming mix-type inhibition of the 5f derivative.
![]() | ||
| Fig. 8 2D interaction diagram of the S isomer of compound 5f within the AChE binding site occurring over 30% of MD simulation time. | ||
Furthermore, the 2D interaction diagram of the R isomer of compound 5f in complex with the enzyme is depicted in Fig. 9. Briefly, indolinone demonstrated pi–cation interaction for around 81% of MD run plus pi–pi stacking interaction (48% of MD simulation time) with His447. The C
O moiety of indolinone also recorded H-bound interaction with Ser203 mediated with water (35% of MD duration time). The nitro moiety also participates in another H-bound interaction with Tyr133 (35% of MD duration time). Another pi–pi stacking interaction was also seen between imidazole and Tyr337 (31% of MD duration time).
![]() | ||
| Fig. 9 2D interaction diagram of the R isomer of compound 5f within the AChE binding site occurring over 30% of MD simulation time. | ||
| Compound | Molecular weight | Log P |
Rotatable bonds | Acceptors | Donors | Surface area |
|---|---|---|---|---|---|---|
| 5a | 337.339 | 1.80812 | 3 | 6 | 4 | 142.596 |
| 5b | 337.339 | 1.80812 | 3 | 6 | 4 | 142.596 |
| 5c | 339.311 | 1.2053 | 3 | 7 | 5 | 141.025 |
| 5d | 353.338 | 1.5083 | 4 | 7 | 4 | 147.710 |
| 5e | 351.366 | 2.11654 | 3 | 6 | 4 | 148.961 |
| 5f | 357.757 | 2.1531 | 3 | 6 | 4 | 146.534 |
| 5g | 357.757 | 2.1531 | 3 | 6 | 4 | 146.534 |
| 5h | 383.364 | 1.5169 | 5 | 8 | 4 | 159.188 |
| 5i | 381.392 | 2.12514 | 4 | 7 | 4 | 160.439 |
| 5j | 382.336 | 1.71632 | 4 | 8 | 4 | 157.249 |
| 5k | 428.361 | 1.4251 | 6 | 10 | 4 | 173.841 |
| 5l | 402.754 | 2.0613 | 4 | 8 | 4 | 161.187 |
| 5m | 405.336 | 2.82692 | 3 | 6 | 4 | 161.458 |
| 5n | 425.754 | 3.1719 | 3 | 6 | 4 | 165.396 |
| 5o | 441.369 | 3.6717 | 3 | 6 | 4 | 177.774 |
| 5p | 371.784 | 2.46152 | 3 | 6 | 4 | 152.899 |
| 5q | 416.235 | 2.57062 | 3 | 6 | 4 | 156.464 |
| Compd. | Absorptiona | Distributiona | Metabolisma | Excretiona | Toxicitya | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HIA% | Caco2 permeability | VDss (log L kg−1) | BBB permeability | CYP3A4 inhibition | CYP2D6 inhibition | CYP2C9 inhibition | CYP2C19 inhibition | Total clearance | Oral rat acute toxicity (LD50) | Oral rat chronic toxicity (LOAEL) | hERG1 inhibitor | |
| a HIA (human intestinal absorption): >80% is high and <30% is poor; VDss (steady-state volume of distribution): log L kg−1: >0.45 is high and <−0.15 is low. The software could not predict parameters for these compounds (−). | ||||||||||||
| 5a | 81.109 | 0.137 | 0.048 | −0.492 | No | No | No | No | 0.509 | 2.127 | 1.877 | No |
| 5b | 81.109 | 0.137 | 0.048 | −0.492 | No | No | No | No | 0.509 | 2.127 | 1.877 | No |
| 5c | 77.373 | −0.253 | 0.238 | −0.663 | No | No | No | No | 0.371 | 2.308 | 2.411 | No |
| 5d | 81.98 | −0.117 | −0.065 | −0.681 | No | No | No | No | 0.437 | 2.076 | 1.971 | No |
| 5e | 81.578 | 0.2 | 0.074 | −0.504 | No | No | No | No | 0.509 | 2.154 | 1.759 | No |
| 5f | 81.817 | 0.024 | −0.01 | −0.646 | No | No | No | No | −0.375 | 2.112 | 1.924 | No |
| 5g | 81.817 | 0.024 | −0.01 | −0.646 | No | No | No | No | −0.375 | 2.112 | 1.924 | No |
| 5h | 78.877 | −0.057 | −0.235 | −0.677 | No | No | No | No | 0.427 | 2.003 | 1.483 | No |
| 5i | 78.475 | 0.112 | −0.082 | −0.5 | No | No | No | No | 0.458 | 2.082 | 1.241 | No |
| 5j | 78.490 | −0.05 | −0.316 | −0.594 | No | No | No | No | 0.453 | 2.704 | 2.187 | No |
| 5k | 75.561 | −0.175 | −0.495 | −0.981 | No | No | No | No | 0.461 | 2.795 | 2.058 | No |
| 5l | 79.198 | −0.07 | −0.362 | −0.747 | No | No | No | No | −0.417 | 2.737 | 2.233 | No |
| 5m | 83.776 | 0.164 | −0.105 | −0.681 | Yes | No | Yes | Yes | 0.124 | 2.036 | 1.403 | No |
| 5n | 84.484 | 0.052 | −0.161 | −0.835 | Yes | No | Yes | Yes | −0.256 | 2.023 | 1.45 | No |
| 5o | 90.348 | −0.081 | −0.328 | −0.676 | Yes | No | Yes | Yes | 0.142 | 2.294 | 1.329 | No |
| 5p | 82.467 | 0.11 | 0.038 | −0.542 | No | No | No | Yes | −0.477 | 2.066 | 1.715 | No |
| 5q | 82.203 | 0.115 | 0.048 | −0.563 | Yes | No | Yes | Yes | −0.499 | 2.074 | 1.698 | No |
Furthermore, based on the MD studies, the S enantiomer of compound 5f depicted noticeable interactions with Tyr72 (H-bound) and Asn87 (H-bound) of the anionic subsite plus Tyr337 (H-bound) and Tyr 341 (H-bound & pi–pi stacking) of the PAS confirming its high potency. Also, 5f was tested against the SHSY-5Y cell line, exhibiting no significant toxicity at 25 μM. It can be understood that this set of compounds can serve as structural outlines to design and expand potential anti-AD agents.
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d3md00255a |
| This journal is © The Royal Society of Chemistry 2024 |