Prasenjit
Seal
*a,
Shawon
Barua
a,
Siddharth
Iyer
a,
Avinash
Kumar
a and
Matti
Rissanen
*ab
aAerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland. E-mail: prasenjit.seal@tuni.fi; matti.rissanen@tuni.fi
bDepartment of Chemistry, University of Helsinki, P. O. Box 55, FI-00014, Helsinki, Finland
First published on 11th September 2023
A series of acyl peroxy radical H-shifts were systematically studied using computational approaches. Acyl peroxy radicals were categorized into small- (ethanal–pentanal), medium- (hexanal and heptanal) and large-sized (octanal and nonanal) molecules. The H-shifts spanning from 1,4 to 1,9 were inspected for each studied system. For all acyl peroxy radicals, it is the combination of barrier heights and quantum mechanical tunneling that explains the yield of the peracid alkyl radical product. We used the ROHF-ROCCSD(T)-F12a/VDZ-F12//ωB97X-D/aug-cc-pVTZ level of theory to estimate the barrier heights and the subsequent rate coefficients with the exception of the smallest acyl peroxy radical ethanal, for which MN15 density functional was applied. The estimated multiconformer H-shift rate coefficients were found to be in the range of 10−2 s−1 to 10−1 s−1 for the fastest H-migrations. The determined rates imply that these H-shift reactions are often competitive with other RO2 loss processes and should be considered as a path to functionalization in modelling not only rural but also urban air quality.
Only a handful of previous investigations have reported H-shift reactions in substituted –AcOO radicals of varying chain lengths.1,4,5 Knap and Jørgensen1 investigated H-shift reactions in substituted –AcOO radicals using high-level quantum chemical methods. The estimated rate coefficients reported for these –AcOO radicals were found to be 2–3 orders of magnitude higher than those of the corresponding aliphatic peroxy radicals. This illustrates the importance of the reactivity of –AcOO radicals to form more stable peracid radicals. Møller et al.10 also reported higher rate coefficients for multi-substituted acyl peroxy radicals compared to aliphatic peroxy radicals in their work. Vereecken and Nozière,5 recently, have reported a series of data sets of H migration rate coefficients in peroxy radicals and constructed a corresponding structure–activity relationship (SAR). For –AcOO radicals, they tentatively summarized the difference in the rates of –AcOO radicals and aliphatic peroxy radicals with a temperature-dependent factor of exp (900 K/T) in favor of –AcOO radicals.
Despite previous theoretical interest, no experimental data appear to be available for the H-shift reactions of pristine –AcOO radicals, i.e., species without any other functionalities on the C chain except the terminal acyl peroxy moiety. The fast H-shift rates estimated for the substituted –AcOO radicals raise the question of how much of the reactivity results from the –AcOO group, and how much is offered by the inductively coupled substituent groups. Thereby, in order to fill this gap, we performed a detailed analysis of the H-shift reactions in these pristine radicals to elucidate their potential role in atmospheric oxidation radical chain propagation, and closely related ambient SOA generation.
After the initial sorting of the conformers, two sets of optimizations were performed, the first of which was done at the B3LYP/6-31+G* (moderate-DFT) level of theory, and structures within 2.0 kcal mol−1 of the minimum were then further re-optimized at ωB97X-D/aug-cc-pVTZ (high-DFT) to get the global minimum (GM) geometry.14–16 In the case of ethanal-AcOO radicals, although we found the transition state at B3LYP/6-31+G*, reoptimizing the TS at ωB97X-D/aug-cc-pVTZ became difficult and resulted in a completely different geometry other than H-shift. Hence, we used the MN15 density functional instead of ωB97X-D that was successful in yielding an H-shifted TS. Finally, we performed energy refinement of the global minimum structure for all the species at the ROHF-ROCCSD(T)-F12a/VDZ-F12 level of theory employing MOLPRO 2021.2.17 This refinement was performed to achieve accurate and reliable energies for the estimation of the H-shift rate coefficients. The strategy is presented schematically in Fig. 1.
![]() | (1) |
![]() | (2) |
The master equation simulations use the Master Equation Solver for Multi-Energy well Reactions (MESMER) code20 to estimate the rate coefficients for these H-shift reactions. MESMER is a single-conformer implementation code. A detailed explanation of how we used MESMER here along with the results obtained from the code is presented in the ESI.†
![]() | ||
Fig. 2 (a) Possible 1,n H-shifts in –AcOO radicals, and (b) a 1,7 H-shift shown as an example for the octanal-AcOO radical. |
We categorized the acyl peroxy radicals studied here into small-, medium- and large-sized systems. The small-sized included ethanal-pentanal –AcOO radicals, the medium-sized systems included hexanal and heptanal radicals, whereas the large-sized –AcOO radicals were those obtained from octanal and nonanal.
Table 1 presents the barrier heights (global minimum TS) and energies of the global minimum structure of the product peracid radicals with respect to the corresponding global minimum reactant radicals. Both zero-point corrected (ΔE) electronic energies and Gibbs free energy (ΔG) values are provided along with the branching ratios of the peracid (–AcOOH) product radicals obtained from MESMER and the Eckart tunneling factor, κGM, for all the possible H-shifts of –AcOO radicals starting from the ethanal-AcOO radical to the nonanal-AcOO radical. The cartesian coordinates, absolute values of the energies along with frequencies for each of the systems are provided in the ESI.† This table reveals that for all the H-shifts in –AcOO radicals, it is the combination of the tunneling correction and barrier height that dictates the branching ratios of the products and hence the rate coefficients, where sometimes the tunnelling is large enough to outcompete a smaller barrier with a small tunnelling contribution. A case in point is that observed for the H-shifts in heptanal-AcOO. With an Eckart tunneling of 105 and a barrier of 19.0 kcal mol−1, the 1,6 H-shift in heptanal-AcOO yields 55% product acid radical whereas with a lower barrier of 17.4 kcal mol−1 and a tunneling of 75, the 1,7 H-shift yields 39% of the product radical. Similarly, for the 1,8 H-shift, with a barrier of 18.7 kcal mol−1 and an Eckart tunneling of 86, we can get only 5% of the peracid radical. The Eckart tunneling contributions range from 68 for the 1,8 H-shift of the octanal-AcOO radical up to 2098 in the 1,4 H-shift of the ethanal-AcOO radical. Despite large tunneling contributions, the reactions with high barriers were found to have negligible product yields. In these H-shift reactions, we considered barriers higher than 20 kcal mol−1 to be a ‘high barrier’. As an example, for the butanal-AcOO radical, although the tunneling is 372 for the primary 1,6 H-shift, the high barrier of 22.8 kcal mol−1 leads to only 9.33% product yield. Another such instance is the 1,8 H-shift of the hexanal-AcOO radical, where the branching ratio of the radical product is only 0.1%, and results from the high barrier of 22.2 kcal mol−1, notwithstanding the appreciable tunneling correction of 286. This can also be attributed to the fact that H atoms on primary carbon atoms tend to have higher bond dissociation energies than secondary.
Reactant radicals | Parameters | H-shifts | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1,4 | 1,5 | 1,6 | 1,7 | 1,8 | 1,9 | ||||||||
TS | Pdt | TS | Pdt | TS | Pdt | TS | Pdt | TS | Pdt | TS | Pdt | ||
Ethanal-AcOO | ΔE | 29.6 | 2.6 | — | — | — | — | — | — | — | — | — | — |
ΔG | 29.7 | 2.9 | |||||||||||
BR | — | — | — | — | — | — | |||||||
κ GM | 2098 | — | — | — | — | — | |||||||
Propanal-AcOO | ΔE | 26.8 | −2.8 | 24.5 | 5.2 | — | — | — | — | — | — | — | — |
ΔG | 26.9 | −2.8 | 25.4 | 4.7 | |||||||||
BR | 3.2 | 96.8 | — | — | — | — | |||||||
κ GM | 136 | 257 | — | — | — | — | |||||||
Butanal-AcOO | ΔE | 26.5 | −2.2 | 21.0 | 2.4 | 22.8 | 4.6 | — | — | — | — | — | — |
ΔG | 26.7 | −2.7 | 21.9 | 1.8 | 23.9 | 3.9 | |||||||
BR | 0.03 | 90.64 | 9.33 | — | — | — | |||||||
κ GM | 124 | 114 | 372 | — | — | — | |||||||
Pentanal-AcOO | ΔE | 26.5 | −2.3 | 20.6 | 2.7 | 19.5 | 1.7 | 20.7 | 4.3 | — | — | — | — |
ΔG | 26.6 | −2.4 | 21.6 | 2.1 | 20.7 | 0.8 | 22.6 | 3.8 | |||||
BR | 0.0 | 11.0 | 82.8 | 6.2 | — | — | |||||||
κ GM | 130 | 95 | 150 | 281 | — | — | |||||||
Hexanal-AcOO | ΔE | 27.1 | −2.1 | 20.5 | 2.9 | 19.1 | 1.8 | 18.1 | 1.4 | 22.2 | 4.7 | — | — |
ΔG | 27.8 | −1.8 | 21.4 | 2.8 | 20.1 | 0.5 | 20.1 | 1.7 | 24.2 | 4.5 | |||
BR | 0.0 | 5.1 | 52.7 | 42.1 | 0.1 | — | |||||||
κ GM | 147 | 95 | 112 | 94 | 286 | — | |||||||
Heptanal-AcOO | ΔE | 27.0 | −2.2 | 20.9 | 2.8 | 19.0 | 1.9 | 17.4 | 1.4 | 18.7 | 1.5 | 20.9 | 4.7 |
ΔG | 27.5 | −1.9 | 22.5 | 3.0 | 19.7 | 2.6 | 19.7 | 2.2 | 21.0 | 1.0 | 23.6 | 5.0 | |
BR | 0.0 | 0.5 | 55.3 | 39.2 | 4.8 | 0.2 | |||||||
κ GM | 158 | 102 | 105 | 75 | 86 | 239 | |||||||
Octanal-AcOO | ΔE | 26.9 | −2.3 | 20.5 | 2.9 | 19.5 | 1.5 | 17.7 | 1.6 | 18.4 | 1.7 | 19.9 | 1.9 |
ΔG | 27.6 | −2.2 | 21.4 | 4.2 | 21.3 | 2.7 | 19.8 | 2.8 | 20.7 | 1.0 | 22.6 | 1.8 | |
BR | 0.0 | 4.9 | 8.5 | 76.3 | 9.7 | 0.6 | |||||||
κ GM | 123 | 86 | 129 | 107 | 68 | 98 | |||||||
Nonanal-AcOO | ΔE | 26.9 | −2.3 | 20.5 | 2.5 | 19.1 | 1.0 | 17.6 | 1.4 | 18.1 | 1.8 | 20.7 | 2.3 |
ΔG | 27.6 | −1.8 | 21.4 | 3.8 | 21.2 | 2.4 | 20.0 | 2.8 | 20.5 | 2.3 | 23.9 | 3.3 | |
BR | 0.0 | 4.5 | 10.7 | 68.7 | 16.0 | 0.1 | |||||||
κ GM | 134 | 86 | 130 | 107 | 69 | 166 |
We computed the IRC-MC-TST unimolecular rate coefficients, kIRC-MC-TST, for all the –AcOO radicals studied, and presented them in Table 2. These values correspond to the current best estimates of –AcOO radical H-shift isomerization rates. We also provide the SAR-derived rate coefficients by Vereecken and Nozière5 for typical peroxy radical H-shift schemes for comparison. The rate coefficients obtained from the GM-MC-TST approach, the SS-TST (eqn (2) with κIRC), and MESMER simulations are provided in Table S2 of the ESI.† The ratio between the SS-TST and MC-TST rate coefficients, i.e., kSS-TST:
kIRC-MC-TST is found to be 3.5 when averaged over all the H-shift reactions. This implies the fact that ignoring the presence of multiple conformers has the potential to give overestimated rates. However, since the higher energy conformers are similar in geometry to the lowest, this overestimation is within a factor of 5.
Reactant radicals | Rate coefficients (s−1) | H-shifts | |||||
---|---|---|---|---|---|---|---|
1,4 | 1,5 | 1,6 | 1,7 | 1,8 | 1,9 | ||
Ethanal-AcOO | k IRC-MC-TST | 7.3 × 10−8 | |||||
k
VN![]() |
4.0 × 10−10 | — | — | — | — | — | |
Propanal-AcOO | k IRC-MC-TST | 5.7 × 10−6 | 8.4 × 10−5 | ||||
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−4 | — | — | — | — | |
Butanal-AcOO | k IRC-MC-TST | 5.2 × 10−6 | 9.3 × 10−3 | 6.7 × 10−4 | |||
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 8.1 × 10−5 | — | — | — | |
Pentanal-AcOO | k IRC-MC-TST | 4.2 × 10−6 | 1.3 × 10−2 | 5.2 × 10−2 | 4.4 × 10−3 | ||
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 1.8 × 10−2 | 2.1 × 10−5 | — | — | |
Hexanal-AcOO | k IRC-MC-TST | 3.4 × 10−7 | 1.9 × 10−2 | 9.7 × 10−2 | 8.8 × 10−2 | 1.8 × 10−4 | |
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 1.8 × 10−2 | 1.8 × 10−3 | 1.7 × 10−6 | — | |
Heptanal-AcOO | k IRC-MC-TST | 8.9 × 10−7 | 1.0 × 10−2 | 2.4 × 10−1 | 1.5 × 10−1 | 2.0 × 10−2 | 4.2 × 10−4 |
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 1.8 × 10−2 | 1.8 × 10−3 | 2.1 × 10−5 | — | |
Octanal-AcOO | k IRC-MC-TST | 1.5 × 10−6 | 1.3 × 10−2 | 1.1 × 10−1 | 9.5 × 10−2 | 2.6 × 10−2 | 1.3 × 10−3 |
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 1.8 × 10−2 | 1.8 × 10−3 | 2.1 × 10−5 | — | |
Nonanal-AcOO | k IRC-MC-TST | 3.3 × 10−6 | 2.4 × 10−2 | 2.1 × 10−1 | 1.8 × 10−1 | 3.6 × 10−2 | 5.2 × 10−4 |
k
VN![]() |
1.2 × 10−7 | 1.6 × 10−2 | 1.8 × 10−2 | 1.8 × 10−3 | 2.1 × 10−5 | — |
For the MC-TST method, we estimated the unimolecular rate coefficients using the IRC and GM approaches as mentioned in the methodology section. As the IRC-MC-TST approach connects the correct reactant and product wells, it inherently results in a more realistic description of the rate coefficients than the GM-MC-TST approach, which only connects the global minima. Yet here, the high-DFT conformers of reactants, products, and TSs all lie within 2.0 kcal mol−1 with respect to their corresponding GM geometries, and thus one can expect that the IRC-obtained structural orientations should not differ much compared to their GM geometries. However, while computing the energies, we observed that although the forward barrier heights between the two approaches didn’t change as such, the reverse barriers, on the other hand, changed considerably. This difference in the barrier heights is attributed to the geometries of the IRC-obtained products that differ from the corresponding GM geometries. The reactants obtained by IRC have similar structural orientations to that of their corresponding GM. The zero-point corrected forward barrier heights (FBH) and reverse barrier heights (RBH) from the two approaches, along with the corresponding Eckart tunneling factors for different H-shift reactions of –AcOO radical series, are presented in Table S3 (ESI†). The difference in FBH between GM and IRC approaches ranges from 0.0 kcal mol−1 in the case of the 1,4 H-shift of ethanal-AcOO and the 1,6 H-shift of heptanal-AcOO to 3.7 kcal mol−1 for 1,9 H-shift of nonanal-AcOO radicals. In contrast, for the RBH, the difference ranges from 5.2 kcal mol−1 in the case of the 1,9 H-shift of heptanal-AcOO to 15.9 kcal mol−1 for the 1,4 H-shift of ethanal-AcOO radicals. This reduction in RBH for the IRC approach reduces the Eckart tunneling factor, κIRC considerably compared to the GM-MC-TST (κGM), and therefore, the computed kIRC-MC-TST value is always lower than kGM-MC-TST as seen in Table S2 of the ESI.† In the case of tunneling factor, this appreciable reduction in the κIRC value is mainly observed for the primary H-shifts. The obtained IRC Eckart tunneling factor is 2.6 times lower than the GM Eckart tunneling factor for 1,9 H-shift of heptanal-AcOO while the same is lowered by 4.4 times for 1,7 H-shift of pentanal-AcOO. It is to be noted here that while obtaining the kIRC-MC-TST and kGM-MC-TST values from eqn (1), only the tunnelling factor differs, whereas all the other terms remain the same. Hence, this lowering of the rate coefficients is directly proportional to the lowering of the Eckart tunneling factor, κIRC with respect to κGM.
The estimated kIRC-MC-TST values presented in Table 2 are shown in Fig. 3–5 for clarity. Since the other approaches discussed in this work were used mainly to see the sensitivity of the methodologies and how the rates derived using them differ, we present graphically the variation of k with the H-shift span in Figs. S1-S4 of the ESI.† Comparing the current results with the only previous data, the SAR formulation of Vereecken and Nozière,5 we find that our H-shift rates obtained from different sources show a similar trend to the function of the H-shift span yet are higher by one to two orders of magnitude than the SAR data. An exception is provided by the 1,5 H-shifts where the SAR rate coefficients are systematically higher than the kIRC-MC-TST rates for all but the hexanal- and nonanal-derived-AcOO radicals (Table 2). The current kIRC-MC-TST and kVNdata agree well for the 1,5 and 1,6 H-shift spans (the VN data based on their predictions for the acyl peroxy on data for 1,5 and 1,6H-shifts) with an average factor of 3 that is well within the indicated uncertainty of the present work and the SAR formulation. Large deviations, however, were observed for the 1,4/1,7/1,8 H-shift spans where the factors are as high as 45, 99, and 1003, respectively. The geometric mean of the kIRC-MC-TST
:
kVN
data ratio across all the values is about 16. These are tabulated in Table S4 of the ESI.† The deviations observed are likely due to the scarceness of the experimental rate data, and thus on the lack of representative systems to base the SAR on.
Vereecken and Nozière derived an empirical correction factor of exp (900 K/T) (i.e., about a factor of 20 at 298 K) in favor of the –AcOO radical H-shift rates over the corresponding aliphatic peroxy radical H-shifts:5
![]() | (3) |
![]() | (4) |
![]() | (5) |
A close inspection of kIRC-MC-TST in Table 2 deciphers the role of inductive effects influencing the rate coefficients of these H-shift reactions. We observed this effect between the primary 1,n H-shift in a particular –AcOO radical and a corresponding secondary 1,n H-shifts in the next two higher –AcOO radical series when –CH3 and –CH2CH3 groups, respectively, were added to that radical. For instance, the secondary 1,6 H-shift kIRC-MC-TST in pentanal-AcOO radical (i.e., the –CH3 group added to the butanal-AcOO radical), is 78 times higher than the primary 1,6 H-shift of butanal-AcOO. In the case of the hexanal-AcOO radical (when a –CH2CH3 group is added to the butanal-AcOO radical), the 1,6 H-shift kIRC-MC-TST is 145 times higher than in butanal-AcOO. When comparing the 1,9 H-shifts for the three highest –AcOO radicals (i.e., heptanal-, octanal- and nonanal-), in heptanal-AcOO the 1,9 H-shift corresponds to a primary H-shift while in octanal- and nonanal-AcOO radicals, they correspond to secondary H-shifts. In the octanal-AcOO radical (i.e., adding a –CH3 group to the heptanal-AcOO radical), there is a 3-fold increase in kIRC-MC-TST whereas the 1,9 H-shift rate in the nonanal-AcOO radical (adding –CH2CH3 group to heptanal-AcOO) increases kIRC-MC-TST only by 1.2-fold. The magnitude of the inductive effect appears substantial also for the 1,8 H-shifts in octanal-, heptanal, and hexanal-AcOO radicals. The 1,8 H-shift in heptanal-AcOO radical is 111 times faster than that of hexanal-AcOO radical and the 1,8 H-shift for octanal-AcOO radical is yet a factor of 144 higher. A detailed description of the H-shift reactions for the –AcOO radicals is provided in Table S5 (ESI†) along with the ksecondaryIRC-MC-TST/kprimaryIRC-MC-TST ratio.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d3cp01833d |
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