Sotaro
Kusumoto
a,
Youssef
Atoini
b,
Yoshihiro
Koide
a,
Shinya
Hayami
*c,
Yang
Kim
*c,
Jack
Harrowfield
*d and
Pierre
Thuéry
*e
aDepartment of Material & Life Chemistry, Kanagawa University, 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
bTechnical University of Munich, Campus Straubing, Schulgasse 22, 94315 Straubing, Germany
cDepartment of Chemistry, Graduate School of Science and Technology, Institute of Industrial Nanomaterials (IINa), Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto 860-8555, Japan. E-mail: hayami@kumamoto-u.ac.jp; ykim@kumamoto-u.ac.jp
dUniversité de Strasbourg, ISIS, 8 allée Gaspard Monge, 67083 Strasbourg, France. E-mail: harrowfield@unistra.fr
eUniversité Paris-Saclay, CEA, CNRS, NIMBE, 91191 Gif-sur-Yvette, France. E-mail: pierre.thuery@cea.fr
First published on 12th September 2023
Four uranyl ion mixed-ligand complexes involving anionic and zwitterionic carboxylate donors have been synthesized under solvo-hydrothermal conditions. [(UO2)2(pda)2(bet)2] (1), where pda2− is 1,3-phenylenediacetate and bet is betaine, crystallizes as a monoperiodic coordination polymer in which all ligands are κ2O,O′-chelated and UO2(pda)(bet)2 units are decorating groups to the UO2(pda) chain. In [bcebpH2][UO2(bcebp)(H2O)2][UO2(tcenm)]4·2H2O (2), where tcenm3− is tris(2-carboxylatoethyl)nitromethane and bcebp is 4,4′-bis(2-carboxylatoethyl)-4,4′-bipyridinium, the two ligands are separated into different polymeric units, di- (hcb) and monoperiodic, respectively, and hydrogen bonding of the bcebpH22+ counterions to chains results in heteropolycatenation, with the counterions crossing four hexagonal networks. [(UO2)2(pht)2(bcpmb)] (3), where pht2− is phthalate and bcpmb is 1,4-bis(4′-carbonylatopyridiniomethyl)benzene, is a diperiodic network with V2O5 topology, while [(UO2)4(O)2(kpim)2(bcpmb)] (4), where kpim2− is 4-ketopimelate, is a diperiodic network with bis(μ3-oxo)-bridged U4O2 secondary building units as nodes and sql topology. In this last case, the large size of the rings allows for 2D + 2D → 3D inclined polycatenation to occur. The relative strength of anionic and zwitterionic carboxylate donors and the importance of weak interactions in the structures are discussed.
Three different zwitterionic carboxylates have been used (Scheme 1), the simplest being betaine (trimethylammonioacetate, bet), which is involved in only a small number of uranyl ion complexes5 reported in the Cambridge Structural Database (CSD, version 5.44),6 generally investigated in the context of ionic liquid studies. The second zwitterionic ligand is 4,4′-bis(2-carboxylatoethyl)-4,4′-bipyridinium (bcebp), which has been shown to give mixed-ligand species with the uranyl ion when associated with either isophthalate or 1,2-, 1,3- and 1,4-phenylenediacetates, with these complexes displaying woven, polycatenated or cage-like structures.2d The third ligand is 1,4-bis(4′-carboxylatopyridiniomethyl)benzene (bcpmb) which, associated with the tricarballylate coligand, has been shown to give a complex in which the two ligands are segregated into different polymeric units, one a cationic, six-fold interpenetrated framework, and the other an anionic nanotubular assembly included in the channels defined by the former.2e These ligands have been associated with anionic polycarboxylate coligands, 1,3-phenylenediacetate (pda2−) for bet, tris(2-carboxylatoethyl)nitromethane (tcenm3−) for bcebp, and phthalate (pht2−) or 4-ketopimelate (kpim2−) for bcpmb. The four resulting complexes, which have been characterized by their crystal structure and their emission spectrum in the solid state, provide further evidence of the versatility of such anionic/zwitterionic carboxylate systems, which makes this approach very promising in the field of uranyl-based coordination polymer studies.7
[UO2(NO3)2(H2O)2]·4H2O (RP Normapur, 99%) was purchased from Prolabo. Betaine (bet), 1,3-phenylenediacetic acid (pdaH2), tris(2-carboxyethyl)nitromethane (tcenmH3), phthalic acid (phtH2) and 4-ketopimelic acid (kpimH2) were from Sigma-Aldrich. 4,4′-Bis(2-hydroxycarbonylethyl)-4,4′-bipyridinium dichloride (bcebpH2Cl2) and 1,4-bis(4′-hydroxycarbonylpyridiniomethyl)benzene dihexafluorophosphate (bcpmbH2(PF6)2) were synthesized as previously reported.2d,e Elemental analyses were performed by MEDAC Ltd. For all syntheses, the solutions were placed in 10 mL tightly closed glass vessels (Pyrex culture tubes with SVL15 stoppers and Teflon-coated seals, provided by VWR) and heated at 140 °C in a sand bath (Harry Gestigkeit ST72). The crystals were grown in the hot, pressurized solutions and not as a result of a final return to ambient conditions, as apparent from direct observation.
1 | 2 | 3 | 4 | |
---|---|---|---|---|
Chemical formula | C30H38N2O16U2 | C72H90N8O54U5 | C36H24N2O16U2 | C34H32N2O24U4 |
M/g mol−1 | 1158.68 | 3121.66 | 1216.63 | 1804.73 |
Crystal system | Monoclinic | Triclinic | Triclinic | Triclinic |
Space group | P21/n | P | P | P |
a/Å | 19.7847(6) | 11.3984(3) | 9.7035(6) | 11.6695(4) |
b/Å | 10.1109(3) | 11.4010(4) | 9.7140(6) | 12.5806(5) |
c/Å | 35.7831(12) | 21.9898(9) | 10.6933(7) | 14.2442(4) |
α/° | 90 | 88.8056(15) | 79.359(4) | 87.1650(13) |
β/° | 90.6793(16) | 79.8563(13) | 75.201(3) | 88.3831(12) |
γ/° | 90 | 60.8371(10) | 71.662(3) | 84.6902(15) |
V/Å3 | 7157.6(4) | 2449.37(15) | 919.03(10) | 2079.07(12) |
Z | 8 | 1 | 1 | 2 |
Reflections collected | 80597 | 117605 | 22763 | 93483 |
Independent reflections | 13583 | 9279 | 3482 | 7902 |
Observed reflections [I > 2σ(I)] | 11497 | 8406 | 3277 | 7573 |
R int | 0.064 | 0.077 | 0.060 | 0.050 |
Parameters refined | 932 | 676 | 253 | 577 |
R 1 | 0.044 | 0.025 | 0.030 | 0.022 |
wR2 | 0.093 | 0.052 | 0.077 | 0.053 |
S | 1.123 | 1.049 | 1.069 | 1.102 |
Δρmin/e Å−3 | −1.85 | −1.74 | −0.72 | −2.44 |
Δρmax/e Å−3 | 2.09 | 0.94 | 3.45 | 1.09 |
Compound 1. The aromatic ring of one pda2− ligand is disordered over two positions which have been refined as idealized hexagons with occupancy parameters constrained to sum to unity and restraints on displacement parameters. The SQUEEZE software added about 4 electrons per formula unit, possibly corresponding to approximately 0.5 water molecule, a number smaller than that found from chemical analysis (see above).
Compound 2. The two aromatic rings of the central part of the zwitterionic ligand are rotationally disordered, and one complete diaromatic model containing both positions has been refined with an occupancy of 0.5. 2-Component twinning was taken into account. The SQUEEZE software added 73 electrons per formula unit, possibly corresponding to approximately 7 water molecules, a number in excess of that found from chemical analysis (see above), probably due to water loss upon drying.
UVI centre | Ligand | U–O (Å) | <U–O> (Å) | <BVcarb> | BVaxial sum | BVtot sum |
---|---|---|---|---|---|---|
a As in all following tables, values separated by a slash correspond to the two bond lengths of a chelated carboxylate group, and the estimated standard deviation (esd) on mean bond length values measures the dispersion of individual values and does not take into account the individual esds. | ||||||
U1 | pda2− | 2.482(5)/2.449(6) | 2.47(2) | 0.440(17) | 3.456 | 6.097 |
2.495(5)/2.470(5) | ||||||
2.439(6)/2.485(5) | ||||||
U2 | pda2− | 2.499(5)/2.450(6) | 2.47(2) | 0.44(2) | 3.433 | 6.087 |
2.489(6)/2.451(5) | ||||||
2.481(5)/2.433(6) | ||||||
U3 | pda2− | 2.439(6)/2.452(7) | 2.446(6) | 0.461(6) | 3.588 | 6.241 |
bet | 2.479(7)/2.470(6) | 2.479(12) | 0.433(10) | |||
2.498(6)/2.467(6) | ||||||
U4 | pda2− | 2.443(6)/2.450(6) | 2.447(3) | 0.461(3) | 3.521 | 6.154 |
bet | 2.475(6)/2.498(6) | 2.484(14) | 0.428(13) | |||
2.465(5)/2.497(6) |
The complex [bcebpH2][UO2(bcebp)(H2O)2][UO2(tcenm)]4·2H2O (2) contains both the protonated zwitterion precursor as a counter-cation and the zwitterion itself as a ligand. Complete separation of the complex subunits formed by the anionic and zwitterionic ligands is found here, as in some previous cases.1a,2a,c,e Atoms U1 and U2 are tris(κ2O,O′)-chelated by three tcenm3− ligands, while atom U3, located on an inversion centre, is chelated by two zwitterionic ligands and bound to two additional water molecules (Fig. 2). Here also, although the U–O bond lengths involving bcebp are within the range defined by those with tcenm3−, calculation of BV parameters fits the trend previously found (Table 3). As in complexes where the zwitterion is not present,20 the two independent UO2(tcenm)− units, with both the metal and ligand being 3-c nodes, form inequivalent but almost identical, close-to-planar diperiodic polymer sheets parallel to (001), which have the point symbol {63} and the hcb topological type. The nitro groups project at an angle of near 80° to the mean plane, all being located on the same side of a given sheet. The inequivalence of the diperiodic sheets arises from the fact that two sheets involving U1 centres lie adjacent with the nitro substituents projecting into the intervening space; on each side of this double sheet lies a sheet incorporating U2 where the nitro groups project away from the U1 sheet and towards a third sheet composed of strands of the monoperiodic polymer incorporating U3 lying side by side. This stacking of the sheets in the order U3–U2–U1–U1–U2 repeats down [001] and is complicated by the fact that bcebpH22+ cations penetrate the sheets at an angle of close to 55° to [001] in such a way as to link consecutive U3 sheets through hydrogen bonding of coordinated water molecules (on U3) to the carboxylic acid groups of bcebpH22+ [O24⋯O25, 2.801(5) Å; O24–H⋯O25, 154(7)°]. There is also a strong hydrogen bonding interaction of the carboxylic acid proton of each terminus with carboxylate oxygen atoms of the U2 sheets [O25⋯O15, 2.613(4) Å; O25–H⋯O15, 177(5)°], supported by CH(methylene)⋯O(carboxylate) interactions involving both U1 and U2 sheets [C⋯O, 3.202(6) and 3.231(5) Å]. There are presumably hydrogen bonding interactions involving the uncoordinated water molecules but as the water hydrogen atoms were not located, these cannot be defined with certainty. Similarly, partial disorder of the bound bcebp phenyl groups (see Experimental) renders the significance of an approach of nitro groups uncertain and prevents a detailed description of aromatic interactions. Each bcebpH22+ cation crosses two hexagonal rings pertaining to the two central anionic sheets, and the hydrogen bonds to the coordinated water molecules at both ends cross the hexagonal rings of the outermost anionic sheets, with the carboxylic oxygen atom being very close to the ring. The cations thus link the chains through the intervening space of four anionic layers, and the whole may be seen as a 2D + 2D → 3D hydrogen-bonded heteropolycatenated triperiodic assembly.
UVI centre | Ligand | U–O (Å) | <U–O> (Å) | <BVcarb> | BVaxial sum | BVtot sum |
---|---|---|---|---|---|---|
U1 | tcenm3− | 2.430(3)/2.503(3) | 2.46(3) | 0.45(2) | 3.463 | 6.138 |
2.440(3)/2.473(3) | ||||||
2.455(3)/2.483(3) | ||||||
U2 | tcenm3− | 2.500(3)/2.454(3) | 2.46(2) | 0.45(2) | 3.453 | 6.147 |
2.457(3)/2.434(3) | ||||||
2.483(3)/2.433(3) | ||||||
U3 | bcebp | 2.480(4)/2.496(3) | 2.488(8) | 0.424(7) | 3.539 | 6.132 |
The complex [(UO2)2(pht)2(bcpmb)] (3) marks a return to a true mixed-ligand species where each UVI centre is bound to both ligands, although the interactions of the two with the metal ion differ rather markedly. Phthalate is a ligand which has been widely studied in its uranyl ion complexes21 and while its coordination modes vary considerably, chelation and multiple bridging interactions are very commonly seen. This is the case in 3, where the pentagonal-bipyramidal UVI centre has a phthalate ligand bound in a 7-membered chelate ring and is also bound to two other phthalate anions by κ1O coordination of the carboxylate oxygen atoms not involved in the chelation, and to one oxygen atom from bcpmb (Fig. 3). The large chelate ring appears to limit the interactions of the zwitterion to κ1O donation rather than the κ2O,O′ chelation found in 1 and 2. As seen in Table 4, this compound gives no hint of a difference between anionic and zwitterionic donors. The metal centre and pht2− are 4- and 3-c nodes, respectively, and bcpmb is a simple edge in the diperiodic network formed parallel to (01), which has the {42·63·8}{42·6} point symbol and the V2O5 topological type. This topology is quite frequent in uranyl ion coordination polymers involving one large linker, and it has been found in isophthalate complexes21j as well as in several mixed-ligand species involving zwitterionic coligands (and one of them isophthalate also).2b,c One probably significant parallel-displaced π-stacking interaction involves pht2− ligands in adjacent layers [centroid⋯centroid, 3.824(3) Å; dihedral angle, 0°; slippage, 1.14 Å]. The sheets are nearly planar and the packing contains some solvent-accessible voids (KPI, 0.68). It is notable that association of bcpmb with pht2− leads to a very different complex to that found for [NH4]2[UO2(bcpmb)2][UO2(tca)]4·2H2O, where tca is tricarballylate,2e though one with perhaps more familiar features.
UVI centre | Ligand | U–O (Å) | <U–O> (Å) | <BVcarb> | BVaxial sum | BVtot sum |
---|---|---|---|---|---|---|
U1 | pht2− | 2.360(4) | 2.38(2) | 0.53(2) | 3.409 | 6.042 |
2.354(4) | ||||||
2.390(4) | ||||||
2.402(4) | ||||||
bcpmb | 2.387(3) | 0.517 |
Partial hydrolysis of the uranyl ion is not an unusual feature of solvothermal syntheses of uranyl coordination polymers,7 and UVI in [(UO2)4(O)2(kpim)2(bcpmb)] (4) is present as a bis(μ3-oxo)-bridged U4O2 cluster to which both kpim2− and bcpmb are bound through μ2-κ2O,O′:κ1O chelating-bridging and μ2-κ1O:κ1O′ bridging for the former, and κ2O,O′ chelating for the latter (Fig. 4). The asymmetric unit contains two independent but similar complex units, each with two uranium atoms, all in somewhat irregular pentagonal-bipyramidal environments, and the U4O2 secondary building units (SBUs) are of the common type (i) in the classification of Loiseau et al.7c The U–O bond lengths and bond valence parameters are given in Table 5: atoms U1 and U3 show most clearly the trend previously found, with bond lengths significantly (for U1 at least) larger, and in consequence bond valence parameters smaller, for zwitterionic than for anionic donors. The bond lengths for U2 and U4, only bound to kpim2− and oxo bridges, display a very large dispersion due to the very large values associated with the chelating (and bridging) carboxylate groups (the mean value for chelating carboxylate groups on pentagonal-bipyramidal uranium centres from the CSD is 2.47(4) Å). However, here also, the bond valence parameter of axial donors is larger for the zwitterion-bound metal ions. The mean U–O(μ3-oxo) bond length over all metal centres is 2.26(3) Å, in agreement with the value of 2.26(6) Å from the CSD, and the mean bond valence parameter is 0.66(4), larger than for any carboxylate donor, as expected (the BV sums for these groups are 2.015 and 1.958, thus confirming their oxo, and not hydroxo, nature); the planarity around the μ3-oxo bridges is shown by the sum of the three U–O–U angles being 358.6 and 360.0° for O16 and O24, respectively. In that both ligands are bound to the cluster, it can be considered as a “true” mixed-ligand species, although only kpim2− interacts with both inequivalent metal ions. While only one other uranyl ion complex of kpim2− has been structurally characterized,2b the ligand appears to have some resemblance to tcenm3− in that the central functionality is not involved in uranyl ion coordination in either of the now known structures. The flexibility of kpim2− is apparent in conformations where the carboxylate donors are essentially divergent in the known species2b and more convergent in the two inequivalent but very similar presently defined forms. Considering only the interactions of kpim2− with the tetranuclear SBU, the full structure can be dissected into two inequivalent but closely similar, double-stranded, monoperiodic polymer chains running along [100]. These chains are linked through bridging by the dizwitterions to form diperiodic networks which have the {44·62} point symbol and sql topological type, with however a double kpim2− edge (simple [(U4O2)(kpim)]2 ring). The sheets containing U1 and U2 lie parallel to (010) while those containing U3 and U4 lie parallel to (001), meaning that the different sheets are near orthogonal (∼87.2°). The rings having bcpmb as edges are sufficiently large (∼8 × 9 Å in the central part) to allow for 2D + 2D → 3D inclined polycatenation with [100] as the zone axis to occur (Fig. 5). This and other large dizwitterions have previously been shown to give entangled structures with the uranyl ion, when associated with anionic coligands.1c,2b,c,d,e,22 It is also notable that, while entangled uranyl-based coordination polymers have frequently been reported lately, those containing large polynuclear SBUs as nodes remain quite unusual.2c,23 The central regions of the zwitterions project upon one another where the different sheets cross each other, in such a way that terminal rings of two zwitterions involving N2 sandwich the central ring of another involving N1, implying significant parallel-displaced π-stacking interactions [centroid⋯centroid, 3.817(3) Å; dihedral angle, 10.1(2)°; slippage, 1.27 Å] (Fig. 6). As expected for such an intricate structure, there is no solvent-accessible void (KPI, 0.72).
UVI centre | Ligand | U–O (Å) | <U–O> (Å) | <BVcarb> | BVaxial sum | BVtot sum |
---|---|---|---|---|---|---|
U1 | kpim2− | 2.366(4) | 2.35(2) | 0.56(2) | 3.406 | 6.063 |
2.327(4) | ||||||
bcpmb | 2.487(4)/2.505(4) | 2.496(9) | 0.418(7) | |||
U2 | kpim2− | 2.535(4)/2.582(4) | 2.50(8) | 0.42(7) | 3.356 | 5.930 |
2.388(4) | ||||||
U3 | kpim2− | 2.385(4) | 2.35(4) | 0.56(4) | 3.426 | 6.073 |
2.313(5) | ||||||
bcpmb | 2.485(4)/2.473(4) | 2.479(6) | 0.432(6) | |||
U4 | kpim2− | 2.548(4)/2.543(4) | 2.49(9) | 0.43(8) | 3.353 | 5.943 |
2.365(4) |
Fig. 6 π-Stacking interactions (dotted line) between bcpmb molecules at the crossing point between polycatenated networks in 4. |
While bond valence values of the present complexes offer some evidence for differences in the bonding capacity between anionic and zwitterionic carboxylates, it may be noted that the coordination modes of the zwitterion ligands further exemplify what has been seen generally in our studies, i.e. that these are very largely of either κ1O or κ2O,O′ forms, with bridging modes rather rare and of the form μ2-κ1O:κ1O′ only, all indicative of a diminished capacity compared to anionic donors. The monodentate κ1O mode leaves one carboxylate oxygen atom available for interactions other than coordination to UVI, seen in complex 3 to be a CH⋯O interaction involving a relatively acidic N+-methylene group proton [C⋯O, 3.284(8) Å; C–H⋯O, 143°], indicating that any U–O interaction energy gained by rearrangement to a κ2O,O′ form must be less than that of the hydrogen bond. Significantly, in the rather few examples known of uranyl ion complexes of zwitterionic ligands where the charge on nitrogen is due to its protonation, thus providing a rather strong hydrogen bond donor site, the ligand binding mode is exclusively κ1O.24 The ligand 1,4-bis(iminiodiacetatomethyl)-2,3,5,6-tetramethylbenzene,24d for example, behaves as a tetrakis(κ1O) species where each NH proton only has close contacts (∼2.1–2.3 Å) to the two uncoordinated oxygen atoms of its iminodiacetate unit, indicative of weak, possibly fluxional, hydrogen bonding even though the N–H⋯O bond angles (∼110°) are far from 180°. This interaction is supported by those of O⋯HO(water) and O⋯HC, perhaps indicating that it is the sum of these interactions that determines the observations. Indeed, in the structure of the uranyl ion complex of the dizwitterion of DOTA (1,4,7,10-tetraazacyclododecane-N,N′,N′′,N′′′-tetraacetic acid) and oxalate,24c the closest contacts to the NH units are to intra-annular nitrogen atoms, and the uncoordinated carboxylate oxygen atoms are strongly hydrogen bonded to uranyl-coordinated water, so that other than possibly through their influence on the zwitterion conformation, the NH units do not directly affect the carboxylate bonding mode.
Fig. 7 Emission spectra of complexes 1, 3 and 4, and uranyl nitrate hexahydrate in the crystalline state upon excitation at 420 nm. |
Another interesting aspect of this work is to provide some new insight on the difference in coordination strength between anionic and zwitterionic carboxylates. While the range of U–O(anionic carboxylate) bond lengths in 1 encompasses that of the U–O(zwitterion carboxylate) bond lengths, the latter all lie towards the longer end of the former and on the true mixed-ligand centres U3 and U4, in particular, those of the former are slightly shorter than those of the latter, which could perhaps be interpreted as indicating a slight preference for the anionic donors. The bond valence parameters for anionic and zwitterionic donors in 1, 2 and 4 confirm the slightly greater donor strength of the former, as well as their stronger effect on the strength of the axial bonds. These results would offer at least a partial explanation of the increasing frequency with which our efforts, including the present examples, to generate mixed-ligand complexes have resulted in crystal structures where anionic- and zwitterionic-carboxylate donors are present in separate components. It need not be considered disadvantageous and indeed adds a new theme to our simple initial objective of using polyanionic donors to increase the periodicity of coordination polymers obtained with polyzwitterionic donors. The present structures provide evidence that these two families of ligands do tend to differ in regard to bonding via chelation and further bridging, with differences possibly associated with the capacity of the cationic centres of the zwitterions to be involved in their particular interactions. As is evident in general for uranyl ion coordination polymer structures, hydrogen bonding can be an important influence, especially when it is in competition with the weak equatorial coordination interactions of the uranyl ion.
Footnote |
† CCDC 2289765–2289768. For crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d3ce00845b |
This journal is © The Royal Society of Chemistry 2023 |