Noritaka
Shimosaraya
a,
Taichi
Sotani
a,
Yu
Miyagi
a,
Evan Angelo Quimada
Mondarte
b,
Kasinan
Suthiwanich
b,
Tomohiro
Hayashi
b,
Yuuya
Nagata
c,
Hiromitsu
Sogawa
a and
Fumio
Sanda
*a
aDepartment of Chemistry and Materials Engineering, Faculty of Chemistry, Materials and Bioengineering, Kansai University, 3-3-35 Yamate-cho, Suita, Osaka 564-8680, Japan. E-mail: sanda@kansai-u.ac.jp
bDepartment of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8503, Japan
cInstitute for Chemical Reaction Design and Discovery, Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo, Hokkaido 001-0021, Japan
First published on 15th November 2021
L-Tyrosine diketopiperazine (DKP) derivative 1 was synthesized, and the aggregation and photoluminescence behaviors were examined. A solution of 1 in tetrahydrofuran (THF) gradually became viscous at room temperature, and turned into the gel state 5 hours after preparation, as confirmed by dynamic viscoelasticity measurement. A solution of 1 in THF exhibited photoluminescence. Fibrous patterns were observed by transmission electron, atomic force and fluorescence microscopies. Dynamic light scattering, semiempirical molecular orbital and density functional theory calculations, as well as molecular dynamics simulations, indicated aggregate formation. This was attributed to intermolecular hydrogen bonding, mainly between the DKP moieties and partly between the urethane moieties, resulting in π-orbital overlap of the terminal phenyl groups leading to photoluminescence.
DKPs are poorly soluble in organic solvents due to their rigid cyclic amide structure. N-Alkylation of one amide group effectively increases the solubility of DKPs due to the collapse of hydrogen-bonding strands, resulting in a change in aggregation state.12 DKPs having long alkyl groups are aggregated based on van der Waals interaction between the alkyl groups, as well as hydrogen bonding between the amide groups.13D-Hydroxyphenylglycine- and sarcosine-derived DKPs form cyclic supramolecular structures.14 DKPs are regularly arranged based on noncovalent (hydrophobic and electrostatic) interactions, in addition to hydrogen bonding between the amide groups. Thus, DKPs find application in liquid crystalline materials,15 microcapsules16 and oil gelling agents,17–22 and the resulting networks are promising building blocks for molecular assemblies.
Various attempts have been made to utilize DKPs as key components of functional polymers.23,24 We previously synthesized several polymers containing DKP moieties in the main and side chains, and examined the properties based on the interactions between the DKP moieties.25–27 Polyamides and polyesters containing aspartic and glutamic acid DKP moieties in the main chain are associated with each other depending on temperature and concentration.25 The acyclic diene metathesis polycondensation of glutamic acid DKP ω-alkenyl esters gives polymers forming regular crystal structures based on intermolecular interactions between the DKP moieties.26 Poly(phenylacetylene)s substituted with DKPs adopt helical conformations with predominantly one-handed screw sense, which are stabilized by intramolecular hydrogen bonding between the DKP s-cis amide groups on the side chains.27 DKP is also useful as a component which enables polymeric materials as well as supramolecules to adopt regular structures.
Organic photoluminescent materials are widely utilized in chemosensors,28 marking dyes for live cells and tissues,29,30 and solid state laser dyes.31 The most common conventional organic luminescent compounds are polycyclic aromatic hydrocarbons, such as naphthalene, anthracene, pyrene and fluorene derivatives. Recently, several non-conventional organic luminescent compounds have been developed, including benzene with push–pull substituents,32–34 terephthalic acid, dimethyl terephthalate and poly(ethylene terephthalate) in the crystalline and regularly aggregated states,35 as well as polyacrylonitrile clusters36 in a manner similar to aggregation-induced emission.37 Other than these sophisticated examples, benzene derivatives rarely exhibit bright luminescence due to their low quantum yields in solution except at very low temperatures.38,39
In the course of our study on DKP-containing molecules, we coincidentally found that a DKP bearing phenylene and urethane moieties self-assembles to emit photoluminescence, even though the DKP contains neither polycyclic aromatic hydrocarbons nor push–pull substituents on the benzene ring. We herein report the aggregation and photoluminescence of an L-tyrosine-derived DKP, and the mechanistic aspects of the intermolecular interactions of the DKP and urethane moieties by quantum mechanics (QM) calculations and molecular dynamics (MD) simulations.
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| Fig. 3 Photographs of a solution of 1 in THF (10 mg mL−1). Left: Sol state just after preparing the solution. Right: Gel state after leaving the solution at room temperature for 5 hours. | ||
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| Fig. 6 Height image obtained by AFM showing the twisting of the ribbon-like structure of 1. The graphs on the right are the height profiles of the line sections shown in the image. | ||
A THF solution of 1 unexpectedly showed luminescence under black light (λ = 254 nm), even though no remarkable photoluminophore is present. As shown in Fig. 7, 1 emitted light around 300 nm upon excitation at the λmax (280 nm). Fluorescence microscopic observation of a solid sample of 1 was carried out to obtain information on the photoluminescence in conjunction with the solid-state morphology. Fibrous patterns were observed in the sample, as shown in Fig. 8, top, in a fashion similar to the TEM (Fig. 5) and AFM (Fig. 6) images mentioned above. On the contrary, 2p, a compound analogous to 1, did not luminesce under black light and exhibited no fluorescence microscopic image, as shown in Fig. 8, bottom. The photoluminescence quantum yields of 1 were 4–9% in THF, as listed in Table 1. As mentioned above, 1 showed photoluminescence in spite of the absence of typical luminophores. The photoluminescence lifetime was 4 ns (Fig. S5, ESI†). On the other hand, benzene and 2 as the reference compounds of 1, exhibited negligibly small photoluminescence in THF (Fig. S6, ESI†). These results strongly support the importance of aggregation of benzene moieties for photoluminescence.
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| Fig. 7 Absorption (blue) and emission (red, excited at 280 nm) spectra of 1 measured in THF (c = 0.04 mM) at 25 °C. | ||
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| Fig. 9 Relationship between the relative energy per unit for the association of 1 and degree of association calculated by the M06-2X/6-31G*, B3LYP-D3/6-31G* and PM7 methods. | ||
Fig. 10 illustrates a possible aggregated structure consisting of 32 molecules of 1, whose geometries were optimized by the DFT method (M06-2X/6-31G*). The 32-mer forms a helical supramolecular structure with a diameter of 40 Å and a pitch of 42 Å.52 One turn of the helix consists of 21 molecules of 1. Intermolecular hydrogen bonding strands exist between the DKP-amide moieties, and also between the urethane moieties. The average interatomic distances between the oxygen and hydrogen atoms (>C
O⋯H–N<) of the DKP-amide and urethane moieties were 1.89 Å and 2.25 Å, respectively. Natural bond orbital (NBO) analysis53 of dimeric 1 (Fig. 11) revealed that the average energies of the hydrogen bonds at the DKP-amide and urethane moieties were 27.9 and 29.9 kJ mol−1, respectively. Usually, a larger distance (here in the H-bond with urethane) leads to a weaker bond energy, but in this case the bond energy is greater. This seeming contradiction between the interatomic distance and hydrogen-bonding energy is attributable to the relative angle at the hydrogen-bonding sites. The average angles of C
O⋯H– of DKP-amide and urethane moieties are 104.5° and 124.6°, respectively. The average angle of the urethane moiety is closer to 120°, the ideal angle for hydrogen-bond formation by sp2 lone pair electrons. Consequently, the energy is rather large compared with that at the DKP-amide moiety in spite of the longer distance. It is considered that hydrogen bonding strands exist between the DKP-amide moieties and urethane moieties. Such hydrogen-bonding strands were observed in all the 2–64-mers. The terminal phenyl groups were located at a distance of 3.2 Å on average, indicating the presence of π-interactions, possibly leading to photoluminescence. Fig. 11 visualizes the reduced density gradient isosurface representing intermolecular interaction using NCIPLOT,54 which supports the presence of π-interaction between the benzene rings as well as hydrogen bonding.
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| Fig. 10 Top and side views of a possible aggregated 32-mer of 1. The geometries were optimized by the DFT method (M06-2X/6-31G*). | ||
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| Fig. 11 Reduced density gradient isosurfaces (green) representing the non-covalent intermolecular interactions in dimeric 1, whose geometries were optimized by the DFT method (M06-2X/6-31G*). | ||
Vibrational calculations of 1- and 8-mers were carried out in vacuum and THF using the self-consistent reaction field-integral equation formalism polarized continuum model (SCRF-IEFPCM) method in order to estimate the free energy change upon association and the solvent effect. The energies were normalized per monomeric unit (1-mer) for comparison. The ΔH° and ΔG° values of the associated 8-mer were more negative than those of the 1-mer both in vacuum and THF, as listed in Table 2, likely due to the formation of hydrogen-bonding strands between the DKP-amide and urethane moieties, as described above. The relative absolute values of ΔG° were smaller than those of ΔH°, indicating that formation of the associated octamer is entropically unfavorable due to the decrease of mobility. It is considered that the stabilization by hydrogen-bond formation exceeds the entropic loss upon association, resulting in the negative ΔG° in the present system. The absolute ΔH° and ΔG° values of the 8-mer are smaller in THF than those in vacuum, suggesting that the decrease of stabilization effect by hydrogen bonding is due to solvation with THF molecules.
The phenylene groups of the 8-mer of 1 are present at so-called “slipped parallel positions”, which are favorable for π-stacking.55 The terminal phenyl groups are present in a similar fashion due to the conformation restricted by the intermolecular hydrogen bonding at the DKP-amide moieties. In fact, some sp2 orbitals of the benzene rings overlap, as shown in Fig. 12. The energy of intermolecular interaction of a slipped parallel benzene dimer is estimated to be 2.48 kcal mol−1 (=10.4 kJ mol−1) by the coupled cluster calculations with single and double substitutions with noniterative triple excitations [CCSD(T)] at the basis set,55 in good agreement with the value experimentally obtained (2.4 kcal mol−1).56 It is therefore assumed that the π-stacking at the four benzene rings of 1 contribute to aggregation with a maximum of 40 kJ mol−1 per unit by dispersion interaction, and that hydrogen bonding further promotes aggregation.56 Widely used density functional B3LYP cannot estimate dispersion interaction differently from the CCSD(T), and therefore B3LYP results are unsuitable for investigation of non-covalent interactions such as hydrogen bonding and π-stacking, while B3LYP-D348,49 and M06-2X50,51 functionals are better in this respect.57
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| Fig. 12 Overlap of MOs of an aggregated 8-mer of 1 obtained by the DFT method (M06-2X/6-31G*). Top: LUMO. Bottom: HOMO−9. | ||
The photoluminescence behaviors of a single molecule and two molecules of 1 were examined by the TD-DFT method using the M06-2X functional and 6-31+G* basis set at nstates = 3, root = 1, with SCRF-IEFPCM (solvent = THF). The first excited states of single and two molecules of 1 were simulated at 255 and 267 nm with oscillator strengths (f) of 0.0650 and 0.1140, respectively (Fig. S7 and S9, ESI†). The simulated emission wavelength and f of dimeric 1 were longer and larger than those of monomeric 1. Compound 1 emitted light around 300 nm, as shown in Fig. 7. It is likely that many more molecules of 1 interact with each other, resulting in further red shift of emission and increase of f. The transition from MO #298 (LUMO+1) to #296 (HOMO) of the dimer mainly contributes to the emission. The LUMO+1 possesses π-electrons at both the terminal and internal phenyl groups. It should be noted that the atomic orbitals partly overlap between the two molecules, as shown in Fig. S10.4 (ESI†), supporting the proposal that the luminescence of 1 is caused by intermolecular interaction between the molecules of 1. The HOMO of 1 dimer mainly possesses π-electrons at one terminal phenyl group.
000 Å3, Fig. S11, (C), ESI†]. The density plot showed a mirror image of the volume plot [Fig. S11, (C), ESI†]. The system equilibrated at a density of approximately 0.92 g cm−3. It is likely that the density of the system increases by 4.5% compared to pure THF (0.88 g cm−3 at 300 K) due to the presence a 32-mer of 1. Thus, the smooth transitions in the plots followed by the oscillations about mean values indicate successful equilibration. The mass-weighted root-mean-square deviation (RMSD) fit to the initial structure increased as the 32-mer of 1 relaxed in the THF box, as shown in Fig. 13(A). The representative RMSD for the distance between the DKP ring atoms of units #16 and #17 was almost stable accompanying no large oscillation, as shown in Fig. 13(B). The representative interatomic distances between the oxygen and hydrogen atoms (>C
O⋯H–N<) of DKP units #16 and #17 equilibrated at ca. 2.0–2.1 Å, as shown in Fig. 13(C), 0.1–0.2 Å longer than the values obtained by the geometry optimization using the DFT method described above. It is quite reasonable that the MD method estimates the hydrogen-bonding distance longer than the DFT method, because of the difference between the dynamic and static calculation methods.
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Fig. 13 (A) Mass-weighted RMSD, (B) RMSD results for the distance between the DKP ring atoms of units #16 and #17, (C) hydrogen atoms (>C O⋯H–N<) of DKP units #16 and #17 in the MD simulation of a 32-mer of 1 in a solvent box consisting of 2662 THF molecules at 300 K for 0–10 ns, AMBER 16 using the ff14SB force field.58 | ||
Fig. 14 shows the snapshots of a 32-mer of 1 in the trajectory obtained by the MD simulation in a THF box at 300 K for 0–10 ns, which give information on the dynamical aggregation behavior. The DKP moieties remain aligned because the hydrogen-bonding strands between the DKP-amide moieties are macroscopically intact during dynamic formation/fission. On the other hand, the urethane moieties lose the aligned structures due to the smaller population of hydrogen-bonded urethanes compared with that of non-hydrogen-bonded moieties. The difference of alignment between the DKP and urethane moieties is reasonable, because the mobility of the DKP-amide groups is much smaller compared with that of the urethane groups, due to the motion-constrained ring-structure and location of the DKP moieties (center of molecule). The DFT calculations estimated that the average interatomic distances of oxygen and hydrogen atoms (>C
O⋯H–N<) of the DKP moieties were 1.89 Å, closer than those of the urethane moieties (2.25 Å), as mentioned above, coinciding with the trend obtained by the MD simulation.
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| Fig. 14 Snapshots of a 32-mer of 1 in the trajectory obtained by the MD simulation performed in a solvent box consisting of 2662 THF molecules at 300 K for 0–10 ns. For clarity, THF molecules are omitted in the snapshots except the left top (0 ns). A movie is available in ESI.† | ||
The diameters of the fibrils observed by TEM and the heights of the patterns observed by AFM are comparable to the diameter of the helical supramolecular structure of 1 optimized by the DFT method. It is suggested that the hydrogen bonds between the DKP moieties and those between the urethane moieties play an important role in the formation of fibrous objects and networks in a manner similar to that in the solution state. Fig. 15 depicts the image of formation of nanoscale fibrils by hierarchical self-assembly of 1. A helical tube with 24 helix turns consisting of 504 molecules of 1 corresponds to a 100 nm fiber according to the DFT-optimized helical tube structure shown in Fig. 10.
O⋯H–N< hydrogen bonding, because many atoms participated in stacking around the benzene rings as shown in Fig. 11.Footnote |
| † Electronic supplementary information (ESI) available: Experimental procedure, additional AFM images, photoluminescence decay, absorption/emission spectra, conformers optimized by the TD-DFT method, representative MO shapes, MD simulation data, and CD/UV-vis absorption spectra. See DOI: 10.1039/d1sm01206a |
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