Open Access Article
Naghmana Kausar
*a,
Shahzad Murtaza*a,
Muhammad Nadeem Arshadbc,
Rahman Shah Zaib Saleem
d,
Abdullah M. Asiri
bc,
Samia Kausarah,
Ataf Ali Altaf
e,
Adina Tatheera,
Ashraf Y. Elnaggar
f and
Salah M. El-Bahyg
aDepartment of Chemistry, University of Gujrat, Gujrat, 50700, Pakistan. E-mail: naghmana.kousar@uog.edu.pk
bChemistry Department, Faculty of Science, King Abdulaziz University, P. O. Box 80203, Jeddah 21589, Saudi Arabia
cCenter of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, P. O. Box 80203, Jeddah 21589, Saudi Arabia
dLahore University of Management Sciences (LUMS), Lahore, Pakistan
eDepartment of Chemistry, University of Okara, Okara 56300, Pakistan
fDepartment of Food Nutrition Science, College of Science, Taif University, P. O. Box 11099, Taif 21944, Saudi Arabia
gDepartment of Chemistry, Turabah University College, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia
hCatalysis Research Center, Department of Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747 Garching, Germany
First published on 24th December 2021
A series of hydrazone derivatives of 2-(benzamido) benzohydrazide was designed, synthesized, and characterized utilizing FTIR, NMR and UV spectroscopic techniques along with mass spectrometry. Compound 10 was also characterized through X-ray crystallography. These synthesized compounds were assessed for their potential as anti-Alzheimer's agents by checking their AChE and BChE inhibition properties by in vitro analysis. The synthesized derivatives were also evaluated for their antioxidant potential along with cytotoxicity studies. The results clearly indicated that dual inhibition of both the enzymes acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) was achieved by most of the compounds (03–13), showing varying IC50values. Remarkably, compound 06 (IC50 = 0.09 ± 0.05 for AChE and 0.14 ± 0.05 for BChE) and compound 13 (IC50 = 0.11 ± 0.03 for AChE and 0.10 ± 0.06 for BChE) from the series showed IC50 values comparable to the standard donepezil (IC50 = 0.10 ± 0.02 for AChE and 0.14 ± 0.03 for BChE). Moreover, the derivative 11 also exhibited selective inhibition against BChE with IC50 = 0.12 ± 0.09. Meanwhile, compounds 04 and 10 exhibited good anti-oxidant activities, showing % scavenging of 95.06% and 82.55%, respectively. Cytotoxicity studies showed that the synthesized compounds showed cell viability greater than 80%; thus, these compounds can be safely used as drugs. DFT and molecular docking studies also supported the experimental findings.
Under this situation, it is very crucial to continue working for the development of highly efficient and more potent inhibitors for these cholinesterases (ChEs). Benzohydrazide derivatives are found to possess broad biological and medicinal importance, thus providing a basic nucleus for the construction of inhibitors against these hydrolyzing enzymes. The compounds bearing benzohydrazide nucleus has been continuously explored for the treatment of many diseases, including AD. They have been found to act as analgesics,18 antimicrobial agents,19 and anticancerous agents.20 In addition, the benzohydrazide derivatives also possess good antiHIV21 and antitubercular22 activities along with significant AChE and BChE inhibition activities.23,24 Recent studies have been carried out to synthesize benzohydrazide derivatives, possessing the ortho-substituted sulfonamide moiety, which displayed potential inhibitory profile against BChE and AChE enzyme.25 In this context, we developed both amide- and sulfonamide-derived benzohydrazide derivatives and found that the amide derivatives possessed good inhibitory activity against both AChE and BChE enzymes.26 Keeping in view the previous efforts that were put to find good inhibitors for AChE and BChE, more benzohydrazide derivatives with thiophene-2-carboxamide moiety attached at the ortho position were synthesized, which showed comparatively good potency against both these enzymes.27
To further elucidate the importance of amide-derived benzohydrazide derivatives, we synthesized a series of 2-(benzamido) benzohydrazide derivatives. The characterization of the synthesized compounds was done utilizing UV, FTIR, and NMR spectroscopic techniques along with mass spectrometry and X-ray crystallographic analysis. The inhibitory activity of the synthesized compounds was assessed against human AChE and BChE. Furthermore, the experimental findings were validated by carrying out DFT analysis and molecular docking studies.
units. Tandem Mass Spectrometric analysis (LTQ XL Linear Ion Trap Mass Spectrophotometer, Thermo Scientific, USA) was utilized to record the mass spectra using electrospray (ESI) ionization probe.
![]() | ||
| Scheme 1 Synthetic scheme of methyl-2-(benzamido) benzoate (03), 2-(benzamido) benzohydrazide (04) and Schiff base derivatives of 2-(benzamido) benzohydrazide (05–13). | ||
The X–H (X = C, N, and O) hydrogen atoms for aromatic and methyl hydrogen atoms were positioned geometrically and treated as the riding atoms with C–H = 0.93 Å and Uiso(H) = 1.2 Ueq(C) for aromatic carbon atoms, C–H = 0.96 Å and Uiso(H) = 1.2 Ueq(C) for methyl carbon atom. The N–H and O–H hydrogen for N1/N2/O4/O5 with N–H = 0.86 Å, O–H = 0.82 Å were positioned geometrically and treated as the riding atoms with Uiso(H) = 1.2 Ueq(N) for nitrogen atoms, and Uiso(H) = 1.5 Ueq(O) for oxygen atom. The hydrogen atom for O3 was positioned using Fourier map with O–H = 1.00 Å and Uiso(H) = 1.5 Ueq(O). The crystal data were deposited at the Cambridge Crystallographic Data Centre and the deposition number 2108057† was assigned, which is known as the CCDC number for compound 10.
CH, stretch), 1651 (C
O, stretch), 3057 (C–H, stretch), 3327 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 7.29 (t, J = 7.6 Hz, 1H, H-4), 7.54 (d, J = 8.4 Hz, 2H, H-18, H-20), 7.58–7.67 (m, 4H, H-5, H-10, H-11, H-12), 7.79 (d, J = 8.4 Hz, 2H, H-21, H-17), 7.91 (d, J = 7.7 Hz, 1H, H-6), 7.97 (d, J = 6.6 Hz, 2H, H-9, H-13), 8.45 (1H, s, N
CH), 8.57 (d, J = 8.3 Hz, 1H, H-3), 11.92 (1H, s, NH–CO), 12.21 (1H, s, NH–N). 13C NMR (75 MHz, DMSO-d6): δ = 120.95 (C-6), 121.56 (C-2), 123.63(C-4), 127.52 (2C, C-9, C-13), 129.10 (C-3), 129.39 (4C, C-10, C-12, C-18, C-20), 129.46 (2C, C-17, C-21), 132.60 (C-11), 133.15 (C-5), 133.44 (C-16), 134.83 (C-8), 135.29 (C-19), 139.77(C-1), 148.10 (C-15, CH
N), 165.00 (C-14), (
N–NHCO), 165.49 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 376 (20, [M]−), 239 (45), 221 (30), 153 (100), 125 (15).
CH, stretch), 1650 (C
O, stretch), 3055 (C–H, stretch), 3328 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 7.3 (t, J = 7.6 Hz, 1H, H-4), 7.61 (t, J = 7.4 Hz, 2H, H-10, H-12), 7.63–7.67 (m, 2H, H-5, H-11), 7.7 (dd, J = 21.9 Hz, 8.5 Hz, 4H, H-17, H-18, H-20, H-21), 7.91 (d, J = 7.0 Hz, 1H, H-6), 7.97 (d, J = 7.2 Hz, 2H, H-9, H-13), 8.44 (1H, s, N
CH), 8.56 (d, J = 8.2 Hz, 1H, H-3), 11.90 (1H, s, NH–N), 12.20 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 121.01 (C-6), 121.60 (C-2), 123.66 (C-4), 124.12 (C-19), 127.53 (2C, C-9, C-13), 129.11 (C-3), 129.42 (2C, C-10, C-12), 129.61 (2C, C-17, C-21), 132.39 (2C, C-18, C-20), C-132.61 (C-11), 133.16 (C-5), 133.80 (C-16), 134.86 (C-8), 139.77 (C-1), 148.23 (C-15, CH
N), 165.03 (C-14,
N–NHCO), 165.50 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 420 (30, [M]−), 239 (55), 221 (30), 197 (100), 169 (15).
CH, stretch), 1648 (C
O, stretch), 3057 (C–H, stretch), 3317 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 3.00 (6H, s, 2CH3, CH3–N), 6.78 (d, J = 8.9 Hz, 2H, H-18, H-20), 7.24 (t, J = 7.5 Hz, 1H, H-4), 7.48 (d, J = 7.6 Hz, 1H, H-5), 7.52 (t, J = 8.0 Hz, 1H, H-11), 7.53–7.61 (m, 5H, H-3, H-10, H-12, H-17, H-21), 7.71 (d, J = 7.1 Hz, 1H, H-6), 7.75 (m, 2H, H-9, H-13), 8.21 (1H, s, N
CH), 10.94 (1H, s, NH–N), 11.60 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 40.0 (CH3N), 112.25 (2C, C-18, C-20), 121.57 (C-6), 121.72 (C-2), 123.19 (C-4), 124.78 (C-16), 129.08 (C-3), 129.19 (2C, C-9, C-13), 129.28 (2C, C-10, C-12), 129.99 (2C, C-17, C-21), 132.85 (C-11), 137.68 (C-5), 138.02 (C-8), 138.70 (C-1), 150.53 (C-15, CH
N), 152.22 (C-19), 163.99 (2C, C-7, C-14, NHCO,
N–NHCO). MS (ESI), 70 eV: m/z (%), 385 (20, [M]−), 239 (35), 221 (20), 162 (100), 134 (05).
CH, stretch), 1649 (C
O, stretch), 3058 (C–H, stretch), 3256 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 7.31 (t, J = 7.4 Hz, 1H, H-4), 7.6 (t, J = 7.3 Hz, 2H, C-10, C-12), 7.62–7.70 (m, 2H, C-5, C-11), 7.92 (d, J = 7.7 Hz 1H, C-6), 7.97 (d, J = 7.4 Hz, 2H, C-9, C-13), 8.02 (d, J = 8.5 Hz, 2H, C-17, C-21), 8.31 (d, J = 8.5 Hz, 2H, C-18, C-20), 8.54 (d, J = 8.4 Hz, 1H, H-3), 8.56 (1H, s, N
CH), 11.81 (1H, s, NH–N), 12.40 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 121.10 (C-6), 121.78 (C-2), 123.71 (C-4), 124.55 (2C, C-18, C-20), 127.56 (2C, C-17, C-21), 128.67, (2C, C-9, C-13), 129.19 (C-3), 129.39 (2C, C-10, C-12), 132.60 (C-11), 133.30 (C-5), 134.84 (C-8), 139.76 (C-1), 140.80 (C-16), 146.81 (C-15, CH
N), 148.48 (C-19),165.09 (C-14,
N–NHCO), 165.71 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 387 (40, [M]−), 239 (65), 221 (20), 178 (20), 164 (100).
CH, stretch), 1657 (C
O, stretch), 3030 (C–H, stretch), 3200 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 1.23 (6H, d, 2CH3–CH), 2.95 (1H, sep, CH–CH3), 7.29 (dd, J = 11.1 Hz, 4 Hz, 1H, H-4), 7.36 (d, J = 8.1 Hz, 2H, H-18, H-20), 7.62 (dd, J = 12.5 Hz, 4.8 Hz, 2H, H-5, H-11), 7.63–7.66 (m, 2H, H-10, H-12), 7.68 (d, J = 8.2 Hz, 2H, H-21, H-17), 7.92 (dd, J = 7.8 Hz, 1.1 Hz, 1H, H-9, H-13), 7.95–7.98 (m, 1H, H-6), 8.58 (d, J = 8.1 Hz, 1H, H-3), 8.44 (1H, s, N
CH), 11.96 (1H, s, NH–N), 12.07 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 24.12 (2C, 2CH3C), 33.87 (1C, CH–(CH3)2), 120.96 (C-6), 121.49 (C-2), 123.62 (C-4), 127.35 (2C, C-18, C-20), 127.52 (2C, C-9, C-13), 127.88 (2C, C-17, C-21), 129.07 (C-3), 129.43 (2C, C-10, C-12) 132.18 (C-11), 132.61 (C-16), 133.06 (C-5), 134.88 (C-8), 139.79 (C-1), 149.64 (C-15, CH
N), 151.53 (C-19), 165.00 (C-14,
N–NHCO), 165.36 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 384 (20, [M]−), 239 (45), 221 (30), 161 (100).
CH, stretch), 1629 (C
O, stretch), 3052 (C–H, stretch), 3200 (NH, stretch), 3526 (OH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 6.41–6.33 (m, 2H, H-18, H-20), 7.28 (t, J = 7.4 Hz, 1H, H-4), 7.37 (d, J = 8.4 Hz, 1H, H-17), 7.62 (m, 4H, H-5, H-10, H-11, H-12), 7.91 (d, J = 7.1 Hz, 1H, H-6), 7.93.7.98 (m, 2H, H-9, H-13), 8.55 (1H, s, N
CH), 8.57 (d, J = 8.6 Hz, 1H, H-3), 10.02 (1H, p-OH), 11.30 (1H, o-OH), 11.98 (1H, s, NH–N), 12.16 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 103.08 (C-18), 108.32 (C-20), 110.97 (C-16), 120.61 (C-6), 121.50 (C-2), 123.61 (C-4), 127.50 (2C, C-9, C-13), 128.98 (C-3), 129.42 (2C, C-10, C-12), 131.56 (C-21), 132.60 (C-11), 133.07 (C-5), 134.90 (C-8), 139.79 (C-1), 150.33 (C-15), 159.95 (C-19), 161.48 (C-17), 164.80 (C-14,
N–NHCO), 166.03 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 374 (30, [M]−), 356 (10), 239 (65), 221 (45), 151 (90), 123 (100).
CH, stretch), 1648 (C
O, stretch), 3053 (C–H, stretch), 3195 (HN, stretch), 3286 (OH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 6.90–6.96 (m, 2H, H-18, H-20), 7.27–7.34 (m, 2H, H-4, H-19), 7.57–7.67 (m, 5H, H-5, H-10, H-11, H-12, H-21), 7.91–7.98 (m, 3H, H-6, H-9, H-13), 8.56 (d, J = 8.4 Hz, 1H, H-3), 8.69 (1H, s, N
CH), 11.12 (1H, s, 1OH), 11.89 (1H, s, NH–N), 12.32 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 116.89 (C-18), 119.22 (C-20), 119.89 (C-16), 120.75 (C-6), 121.66 (C-2), 123.67 (C-4), 127.53 (2C, C-9, C-13), 129.10 (C-3), 129.41 (2C, C-10, C-12), 129.58 (C-21), 132.17 (C-19), 132.60 (C-11), 133.20 (C-5), 134.89 (C-8), 139.78 (C-1), 149.29 (C-15), 157.90 (C-17), 165.08 (C-14,
N–NHCO), 165.16 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 358 (20, [M]−), 239 (25), 221 (20), 135 (100), 107 (10).
CH, stretch), 1649 (C
O, stretch), 3055 (C–H, stretch), 3309 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 3.78 (3H, s, OCH3), 7.08 (m, 2H, H-18, H-20), 7.29 (t, J = 7.6 Hz, 1H, H-4), 7.58–7.66 (m, 5H, H-5, H-10, H-12, H-17, H-21), 7.79 (dd, J = 7.7 Hz, 1H, H-11), 7.91–7.98 (m, 3H, H-6, H-9, H-13), 8.60 (d, J = 8.3 Hz, 1H, H-3), 8.73 (1H, s, N
CH), 12.03 (1H, s, NH–N), 12.03 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 57.4 (CH3O), 116.10 (2C, C-18, C-20), 120.80 (C-6), 121.42 (C-2), 123.56 (C-4), 127.50 (2C, C-9, C-13), 128.97 (C-3), 129.42 (4C, C-10, C-12), 129.73 (C-16), 131.95 (2C, C-17, C-21), 132.61 (C-11), 133.08 (C-5), 134.86 (C-8), 140.34 (C-1), 148.24 (C-15, CH
N), 164.97 (C-19), 165.22 (C-14,
N–NHCO), 165.22 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 372 (40, [M]−), 239 (50), 221 (35), 149 (100), 121 (15).
CH, stretch), 1643 (C
O, stretch), 3056 (C–H, stretch), 3212 (NH, stretch). 1H NMR (300 MHz, DMSO-d6): δ = 7.3 (t, J = 7.5 Hz, 1H, H-4), 7.46–7.52 (m, 3H, H-18, H-19, H-20), 7.61 (t, J = 7.4 Hz, 2H, H-10, H-12), 7.63–7.68 (m, 2H, H-5, H-11), 7.75–7.79 (m, 2H, H-21, H-17), 7.93 (d, J = 7.3 Hz, 1H, H-6), 7.97 (d, J = 7.3 Hz, 2H, H-9, H-13), 8.58 (d, J = 8.3 Hz, 1H, H-3), 8.48 (1H, s, N
CH), 11.95 (1H, s, NH–N), 12.13 (1H, s, NH–CO). 13C NMR (75 MHz, DMSO-d6): δ = 120.97 (C-6), 121.53 (C-2), 123.63 (C-4), 127.53 (2C, C-18, C-20), 127.77 (2C, C-9, C-13), 129.09 (C-3), 129.37 (2C, C-17, C-21), 129.42 (2C, C-10, C-12) 130.87 (C-19), 132.60 (C-11), 133.11 (C-16), 134.50 (C-5), 134.87 (C-8), 139.80 (C-1), 149.56 (C-15, CH
N), 165.02 (C-14, (
N–NHCO), 165.46 (C-7, NHCO). MS (ESI), 70 eV: m/z (%), 342 (30, [M]−), 239 (35), 221 (20), 119 (100), 91 (10).
![]() | (1) |
Every experiment was conducted in triplicate with average values used for calculations Donepezil was taken as the reference drug. Inhibition was also assessed by computing the IC50 values, which were calculated from the dose–effect curves by linear regression.
![]() | (2) |
Resazurin assay was performed as an oxidation-reduction indicator to determine the in vitro cytotoxicity of the compounds (05–08). When the cells were approximately 80% confluent (80% of the surface of flask covered by the cell monolayer after 8–10 days), they were washed twice with PBS pre-warmed at 37 °C. The test solutions including the sample compounds (10 mM), positive control prepared in white MEM, and negative control (0.5% v/v Triton X-100) were added in 500 μL volumes in triplicate to the cell culture. Then, the treated cells were incubated at 37 °C in 5% CO2 environment for 3 and 24 h. Afterward, the test solutions were removed and the cells were washed twice with prewarmed phosphate buffer saline (PBS). A diluted resazurin solution (2.2 μM) in 500 μL volume was added to each well and the cells were incubated for 3 h. The supernatant (100 μL) was afterward transferred to a black 96-well plate and the fluorescence intensity was measured using a microplate reader at a wavelength of 540 nm with background subtraction at 590 nm.34 The percentage of the viable cells was calculated using the following equation eqn (3).
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N) groups with the phenyl ring in these compounds (05–13). The variation in the absorption maxima (λmax) of these compounds (05–13) was associated with the attachment of different substituents in the phenyl ring attached to the azomethine group. Unsubstituted benzylidene group showed λmax at 304 nm. EWGs such as p-chloro and p-bromo showed a slight bathochromic shift (05 and 06) in comparison to EDGs such as p-N(CH3)2, o-OH, p-OH, and p-OCH3 groups (08, 10, 11, and 12). Maximum red shift was attributed to the presence of the p-NO2 group in compound 07 (Fig. 1).
N) group and the disappearance of the signal at 3316 cm−1 for the (–NH2) group in the IR spectrum clearly confirms the conversion of 2-(benzamido) benzohydrazide (04) to its Schiff bases (05–13). All these derivatives have shown significant peaks for C
O stretching frequencies in the range of 1629–1657 cm−1. Furthermore, the peaks for the N–H bond appeared in the range of 3195–3328 cm−1. In addition, the peaks for the C–H stretch attached to the aromatic system appeared at 3030–3057 cm−1. The broader peaks for the –OH groups were observed for compounds (10) and (11) in the range of 3286–3526 cm−1. All the FTIR data approved the synthesis of the compounds (05–13).
N) protons confirmed the formation of the imine linkage. Similarly, in the 13C spectra, the signals appearing in the range of 146.8–150.5 ppm for the imine carbon atom (HC
N) in all these compounds reinforced the results. While the signals of the aromatic protons varied in the range between 6.34 ppm and 8.61 ppm in the 1H NMR spectrum, which is related to the nature of the substituents present on the aromatic ring in all the Schiff base derivatives (05–13). In compounds (07, 10, 11, and 12), the signals for aromatic protons were shifted upfield (6.34–7.08 ppm) due to the attachment of the electron donating groups (EDG), i.e., dimethylamino, hydroxyl, and methoxyl groups. These EDG groups caused a increase in the electron density at the ortho and para positions of the benzene ring in these compounds, thereby changing the position of the peaks of the corresponding protons up field in contrast to the peak of proton (7.29 ppm) in compound 13, which has the non-substituted benzylidene ring. In compound 12, the methoxyl groups attached to the aromatic ring showed proton signals at 3.78 ppm. Likewise, the signals of aromatic carbons in the 13C NMR spectra also varied in accordance with the substituents attached to the benzylidene ring in compounds (05–13) in the range of 103.0–161.4 ppm, thus approving the structures of the synthesized hydrazone derivatives. All the spectral data for 1H NMR and 13C NMR are in accordance with the structures of the synthesized compounds.
C15
N3
) functionality of N-[2-(2,4-dihydroxy-benzylidene-hydrazinocarbonyl)-phenyl]benzamide adopted the most stable trans geometry. The central aromatic ring (C1–C6) is occupied by the benzamide at position 1, while the C2 atom is bonded with 2,4-dihydroxy-benzylidene-hydrazinocarbonyl. The three available aromatic rings were twisted at different angles with each other, i.e., the ring (C1–C6) was oriented by 54.05(8) and 31.83(11) with respect to the (C8–C13) and (C16–C21). The dihedral angle between the rings (C8–C13) and (C16–C21) is 75.20(8). The hydrazinocarbonyl system is connected to 2,4-dihydroxyphenyl (C16–C21) and an aromatic ring (C1–C6) at its each end. The plane of the hydrazinocarbonyl system is almost planar (dihedral angle = 3.14(2)°) with 2,4-dihydroxyphenyl (C16–C21) and twisted by 32.58(9)° with respect to the aromatic ring (C1–C6). The presence of the methanol molecule as the solvent in the crystal system supports the additional hydrogen bonding interactions. Two different six-membered ring motifs were S(6) generated via the intramolecular interactions of N1–H1n⋯O2 and O3–H1O⋯N3. The N2–H2N of the hydrazine functionality is connected with the O1 of other molecule to generate a sixteen-membered ring motif R22(16),37 following the symmetry equation as 2 − X, 2 − Y, 2 − Z.
| CCDC number | 2108057 |
| Empirical formula | C22H21N3O5Ho |
| Formula weight | 407.42 |
| Temperature/K | 296(2) |
| Crystal system | Triclinic |
| Space group | P![]() |
| a/Å | 8.6661(9) |
| b/Å | 11.0426(8) |
| c/Å | 12.2572(12) |
| α/° | 108.672(7) |
| β/° | 102.099(8) |
| γ/° | 108.033(8) |
| Volume/Å3 | 992.66(17) |
| Z | 2 |
| ρcalc/g cm−3 | 1.363 |
| μ/mm−1 | 0.098 |
| F(000) | 428.0 |
| Crystal size/mm3 | 0.41 × 0.22 × 0.19 |
| Radiation | MoKα (λ = 0.7107) |
| 2Θ range for data collection/° | 6.426 to 58.372 |
| Index ranges | −10 ≤ h ≤ 11, −14 ≤ k ≤ 14, −16 ≤ l ≤ 16 |
| Reflections collected | 7704 |
| Independent reflections | 4628 [Rint = 0.0252, Rsigma = 0.0516] |
| Data/restraints/parameters | 4628/0/286 |
| Goodness-of-fit on F2 | 1.036 |
| Final R indexes [I ≥ 2σ(I)] | R1 = 0.0560, wR2 = 0.1203 |
| Final R indexes [all data] | R1 = 0.1014, wR2 = 0.1462 |
| Largest diff. peak/hole/e Å−3 | 0.20/−0.20 |
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| Fig. 2 (a) ORTEP diagram of compound 10; thermal ellipsoids were drawn at 50% probability level. (b) A view showing the formation of the two-dimensional network along the ab-plane. | ||
The hydroxyl group of methanol is taking part both as the donor and the acceptor for hydrogen bonding interactions. On the one hand, it is connected with the molecule via O5–H3O⋯O3 and on the other hand, it binds with the interaction of O4–H2O⋯O5, following the symmetry equations 1 − X, 1 − Y, 1 − Z and 2 − X, 1 − Y, 1 − Z, respectively Table 2. All these interactions connect the molecules and produce a two-dimensional network along the ab-plane (Fig. 2(b)). Intramolecular and inter-molecular hydrogen bonding interactions in crystal structure of compound 10 have been presented in (Fig. 3).
| Compound # | Absorbance | Scavenging (%) |
|---|---|---|
| 3 | 1.570 | 37.17 |
| 4 | 0.123 | 95.07 |
| 5 | 1.615 | 35.37 |
| 6 | 2.102 | 15.88 |
| 7 | 1.400 | 43.97 |
| 8 | 1.994 | 20.20 |
| 9 | 1.656 | 33.73 |
| 10 | 0.436 | 82.55 |
| 11 | 2.003 | 67.54 |
| 12 | 1.747 | 30.09 |
| 13 | 1.744 | 30.21 |
| +ve control (AA) | 0.090 | 96.39 |
| DPPH | 2.499 |
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| Fig. 3 Two different views showing the intra- and inter-molecular hydrogen bonding interactions in the crystal structure of compound 10. | ||
| Compounds | AChE IC50 values ±SEMa (μM) | BChE IC50 values ±SEMa (μM) |
|---|---|---|
| a IC50 values (mean ± standard error of mean).b NA: inactive. | ||
| 3 | 0.25 ± 0.06 | 0.21 ± 0.06 |
| 4 | 27.65 ± 0.14 | 0.17 ± 0.12 |
| 5 | 1.03 ± 0.12 | 1.24 ± 0.12 |
| 6 | 0.09 ± 0.05 | 0.14 ± 0.05 |
| 7 | 25.20 ± 0.21 | NAb |
| 8 | 14.8 ± 0.29 | 0.19 ± 0.12 |
| 9 | 23.12 ± 0.25 | NAb |
| 10 | 18.5 ± 0.19 | 2.15 ± 0.26 |
| 11 | 01.14 ± 0.35 | 0.12 ± 0.09 |
| 12 | 20.43 ± 0.23 | 18.34 ± 0.14 |
| 13 | 0.11 ± 0.03 | 0.10 ± 0.06 |
| Donepezil | 0.10 ± 0.02 | 0.14 ± 0.03 |
Noteworthily, the most potent compound 06 having bromo substituent at the para position in the benzylidene ring showed dual inhibitory potential against both AChE and BChE, showing IC50 = 0.09 μM against AChE and IC50 = 0.14 μM against BChE. This is due to the presence of many important interactions with the bromo group inside the active pocket of both the enzymes, which is attributed to the presence of lone pairs of electrons on it.27 Furthermore, compound 13 showed good inhibition against both the enzymes AChE and BChE with IC50 = 0.11 μM (AChE) and IC50 = 0.10 μM (BChE). This is because of the ability of this compound to form additional hydrophobic π–π stacked interactions using its unimpeded pi-electron cloud in addition to other type of associations inside the active pockets of both the enzymes. In addition, compound 11 having hydroxyl group substituted at the ortho and para positions have shown selective inhibitory potential against BChE as compared to AChE with IC50 = 0.12 μM (BChE). We noted that all the compounds except compounds 07, 09, and 12 showed more inhibitory activity against BChE as compared to AChE.
Overall, it was found that the 2-benzamido derivatives of benzohydrazide have shown inhibitory activity against both the enzymes AChE and BChE, possessing more potency against BChE as compared to AChE. However, the inhibitory activity is mainly controlled by all the structural features present in a compound. However, the variation of the substituents on the key structural motif was actually accountable for the variation in the inhibition potential. Since the common skeleton of 2-(benzamido) benzohydrazide is present in the structures of all the synthesized compounds; therefore, the activity is mainly controlled by the type of the substituent attached to the benzylidene ring. The abovementioned findings suggest that these multi-functional hydrazone derivatives of anthranilic acid (05–13) can be used as the lead compounds for the further development toward the design and synthesis of new inhibitors against AChE and BChE enzymes. The outcome of the SAR studies are precisely presented in Fig. 4.
| Compounds | h AChE lowest binding energy ΔG in kJ mol−1 | h BChE lowest binding energy ΔG in kJ mol−1 |
|---|---|---|
| 05 | −10.34 | −9.80 |
| 06 | −10.63 | −9.89 |
| 07 | −9.55 | −9.34 |
| 08 | −9.35 | −9.05 |
| 09 | −10.27 | −10.06 |
| 10 | −10.29 | −8.93 |
| 11 | −9.47 | −9.29 |
| 12 | −10.15 | −9.37 |
| 13 | −11.51 | −10.51 |
| 14 | −10 (HUW) | −6.83 (THA) |
Different substitutions attached to different inhibitors caused a variation in the type of the interactions between the ligand and the proteins. A very potent inhibitor (13) is stabilized inside the active pocket of AChE by making significant associations with the amino acid residues, as depicted in Fig. 6. All the three amino acid residues (TYR-337, TRP-86, and GLU-202) of the choline binding site are involved for making important interactions with the ligand. GLU-202 made electrostatic interaction with a distance of 4.5 Å with the –NH group from the carbohydrazide part of the ligand, while the hydroxyl group of TYR-337 developed two hydrogen bond interactions, one with the amide oxygen atom (2.4 Å) and the second with the pi electrons of the aromatic system (3.5 Å). In addition, TYR-337 makes two π–π stacked interactions and TRP-86 forms 4π–π stacking with the pi electron cloud of the benzene rings, which further contribute to the stabilization of the ligand. GLY-121 from the oxyanion hole also plays a part by hydrogen bonding (3.3 Å) with the carbonyl oxygen of the carbohydrazide part of the ligand.
In addition, HIS-447 and SER-125 both cooperate toward ligand stability inside AChE by forming hydrogen bonds with distances of 2.96 Å and 3.7 Å.
Furthermore, this inhibitor (13) resides very well inside the active pocket of BChE by establishing potent interactions with the enzyme active site residues, as depicted in Fig. 7. Hydrogen bond interactions of the ligand with the active pocket of the enzyme play an important role in its stabilization inside the active pocket such as the hydrogen atom from the NH–CO group of the hydrazone linkage is involved in the formation of two very strong H-bonds, one with oxygen atom of SER-198 from the catalytic triad of BChE with a bond distance 2.45 Å and another with the GLU-197 amino acid residue with a bond distance of 1.9 Å. In addition, SER-198 is establishes H-bond with the imine nitrogen having a bond distance of 2.7 Å. In the same way, GLY-116 and GLY-117 from the oxyanion hole of the enzyme form amide π-stacked bonding with the aromatic ring of the ligand with the bond distance of 4.3 Å. Two more hydrogen bond associations were shown by the ligand with HIS-348 and GLY-439 with bond lengths 3.4 Å and 3.3 Å, respectively. TRP-82 from the anionic site contributes to the stabilization of the ligand inside the active pocket of the enzyme by establishing two π–π stacked interactions with the π–electrons of the aromatic portion of the inhibitor (4.2 Å and 5.4 Å). Similarly, π–π T-shaped interactions were formed by PHE-329 from the anionic site (5.3 Å). ALA-328 established pi–alkyl interactions (4.2 Å) with the benzene rings of the compound 13, thus further enhancing its stabilization inside the active site of the enzyme.
The most potent ligand (06) showed very good accommodation inside the active pocket of AChE by forming many important interactions, as shown in Fig. 8. Compound 06 shows conserved interactions with the choline binding site of the AChE enzyme, similar to that of compound 13, i.e., it makes H-bond interactions (3.32 Å) with the hydroxyl group of TYR-337 utilizing its π-electron cloud from the aromatic system. Similarly, TRP-86 also established H-bond (2.5 Å) with the hydrogen atom of the –NH group from the hydrazone part of the molecule. SER-125 also makes H-bond with the π-electrons of the benzamide part of the ligand with the bond distance of 3.98 Å. Likewise, TRP-86 contributes to the stabilization of the ligand inside the active pocket of AChE by making electrostatic π-cation interaction (3.25 Å) with the nitrogen atom of the –NH group from the hydrazone part along with one π-alkyl interaction (4.87 Å) with the aromatic portion of the benzylidene ring. Similarly, TYR-337 forms two π-alkyl interactions with bond distances of 3.5 Å and 4.9 Å along with one π–π T-shaped interaction (5.4 Å) with the π-electron cloud of the benzohydrazide ring. TRP-439 also plays its role in the stabilization of ligand 06 inside the active pocket by forming four π-alkyl interactions, two with the bromo substituent with distances of 3.5 Å and 4.1 Å, along with two π-alkyl interactions (4.6 Å and 4.8 Å) with the benzylidene ring of the ligand. The additional contribution of the bromo substituent attached at the para position of the benzylidene ring of ligand 06 is also significant because it makes two more hydrophobic alkyl interactions with MET-443 (4.2 Å) and PRO-446 (3.7 Å) along with one hydrophobic π-alkyl interaction with TYR-449 (5.2 Å).
Likewise, ligand 06 finds its best accommodation inside the active pocket of the BChE enzyme by making many important binding associations with the amino acid residues of the enzyme, as shown in Fig. 9. It forms conserved H-bond interactions with SER-198 from the catalytic triad (2.6 Å) and GLU-197 (2.1 Å) with the hydrogen atom from the NH–CO group of the hydrazone linkage similar to inhibitor 13. Similarly, GLY-439 established H-bond interaction with the oxygen atom of the carbonyl group of the hydrazone linkage (3.6 Å). TRP-82 from the anionic site established π–π T-shaped interaction (4.3 Å) with the phenyl ring of the benzamide part of the inhibitor. The bromine substituent at the para position of the benzylidene ring also contributes to the stabilization of the ligand by forming π–alkyl interactions with LEU-286 (4.6 Å) and VAL-288 (4.9 Å) from acyl pocket of BChE along with one more π–alkyl bonding with TRP-231 (4.7 Å) amino acid residue. ALA-328 is also making its contribution by establishing π–alkyl interaction with aromatic portion of the compound 06 with a bond distance of 4.2 Å.
The binding modes of the known selective inhibitor (AChE), i.e., donepezil has been reported previously.41,42 The redocking of the previously known inhibitor, i.e., donepezil, was performed against the active pocket of AChE to validate the docking results and is presented in Fig. S1.† The most potent inhibitors 13 and 06 have shown hydrophobic binding interactions with TRP-86 and TYR-337 similar to the interactions shown by donepezil. The additional conserved binding interaction of compound 06 inside the AChE active pocket was with PHE-338. TYR-337 also establishes hydrogen bonding inside the AChE active pocket for compound 13, thereby further enhancing its stabilization inside AChE. Conclusively, molecular docking results have very well supported the good inhibition activities of the compounds against AChE and BChE enzymes in comparison to the standard taken, i.e., donepezil.
N) groups with the phenyl ring. The red shift observed for 13 was associated with the attachment of different substituent to the azomethine group.
N) signal at 1580–1610 cm−1 in the IR spectrum unambiguously authenticates the formation of compounds, which agrees well with the theoretical spectra as well. Compound 13 shows a significant peak for C
O stretching frequencies in the range of 1630–1660 cm−1. Furthermore, the peaks for the N–H bond appeared in the range of 3200–3330 cm−1. In addition, the peaks for C–H stretching attached with the aromatic system appeared at 3030–3060 cm−1. The experimental FTIR spectra agree well with the calculated theoretical spectra, as shown in Fig. 10(b).
| Compounds | ELUMO (Hartree) | EHOMO (Hartree) | ELUMO–EHOMO gap ΔE (Hartree) |
|---|---|---|---|
| 04 | −0.1933 | −0.3153 | 0.1220 |
| 05 | −0.1931 | −0.3039 | 0.1108 |
| 06 | −0.1929 | −0.2909 | 0.0980 |
| 07 | −0.1926 | −0.2871 | 0.0950 |
| 08 | −0.2065 | −0.3051 | 0.0986 |
| 09 | −0.1985 | −0.3101 | 0.1116 |
| 10 | −0.1935 | −0.3001 | 0.1066 |
| 11 | −0.1934 | −0.3033 | 0.1099 |
| 12 | −0.1931 | −0.3072 | 0.1141 |
| 13 | −0.1993 | −0.3106 | 0.1113 |
![]() | (4) |
![]() | (5) |
![]() | (6) |
![]() | (7) |
![]() | (8) |
| Samples | Electron affinity (EA) | Ionization potential (IP) | Electronegativity (x) | Electrophilicity (ω) | Chemical potential (μ) | Global hardness (η) | Global softness (σ) |
|---|---|---|---|---|---|---|---|
| 04 | 0.1933 | 0.3153 | 0.2543 | 0.5301 | −0.2543 | 0.0610 | 8.1967 |
| 05 | 0.1931 | 0.3039 | 0.2485 | 0.5573 | −0.2485 | 0.0554 | 9.0253 |
| 06 | 0.1929 | 0.2909 | 0.2419 | 0.5971 | −0.2419 | 0.0490 | 10.204 |
| 07 | 0.1926 | 0.2871 | 0.23985 | 0.6088 | −0.2399 | 0.0473 | 10.582 |
| 08 | 0.2065 | 0.3051 | 0.2558 | 0.6636 | −0.2558 | 0.0493 | 10.1412 |
| 09 | 0.1985 | 0.3101 | 0.2543 | 0.5795 | −0.2543 | 0.0558 | 8.9606 |
| 10 | 0.1935 | 0.3001 | 0.2468 | 0.5714 | −0.2468 | 0.0533 | 9.3809 |
| 11 | 0.1934 | 0.3033 | 0.24835 | 0.5612 | −0.2484 | 0.0549 | 9.0992 |
| 12 | 0.1931 | 0.3072 | 0.25015 | 0.5484 | −0.2502 | 0.0571 | 8.7642 |
| 13 | 0.1993 | 0.3106 | 0.25495 | 0.5840 | −0.2549 | 0.0557 | 8.9847 |
The chemical reactivity of a compound specifies its capability to be stabilized by attracting the charge from the environment.48 The chemical reactivity characteristics of the compounds can be elucidated by the parameters, i.e., ionization potential, electron affinity, electronegativity, electrophilicity, chemical potential, global hardness, and global softness. These parameters were calculated for all compounds (04–13) and are reported in Table 7.
The small energy gap specifies the compound to be soft and reactive while the large energy gap indicates that the molecule is hard and does not react easily.49 Compound 06 has shown greater softness characteristics (Table 7), making it the most reactive, which can be attributed to the inclusion of –Br, the functional group in its structure. The high value of global hardness compared to the softness proposed the less reactivity and high stability of the compounds, as given in Table 7. From the calculated values of chemical potential and global hardness of the synthesized compounds, the most thermally and kinetically stable compound was found to be 04. The calculated negative value of the chemical potential showed that it is comparatively easy for the compounds to gain electrons from the environment. However, the compounds found to have greater charge transfer ability and most of the compounds are more reactive. On the basis of the chemical reactivity characteristics, these compounds can be proved to be efficient antifungal and antibacterial candidates.
These charges have a very important role in quantum chemical approach and also affect the polarizability, dipole moment, and electronic structure of the molecule, and hence the reactivity of the biological targets. The measured values of the atomic charges showed the presence of highly electronegative atoms such as O, N, Cl, and Br. From this, it is clear that the positive charge is distributed on the carbon atoms, while all types of hydrogen atoms possess positive charge.
Footnote |
| † Electronic supplementary information (ESI) available. CCDC 2108057. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d1ra07221h |
| This journal is © The Royal Society of Chemistry 2022 |