Patryk
Obstarczyk
a,
Maciej
Lipok
a,
Andrzej
Żak
b,
Paweł
Cwynar
a and
Joanna
Olesiak-Bańska
*a
aAdvanced Materials Engineering and Modelling Group, Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspaińskiego 27, 50-370 Wrocław, Poland. E-mail: joanna.olesiak@pwr.edu.pl
bElectron Microscopy Laboratory, Faculty of Mechanical Engineering, Wrocław University of Science and Technology, Wybrzeże Wyspaińskiego 27, 50-370 Wrocław, Poland
First published on 28th January 2022
Protein misfolding products – amyloids – tend to form distinct fibrillar structures of the characteristic fold for a given neurodegenerative disease or pathology. Moreover, amyloids (also in the intermediate or distorted state) can act as secondary nuclei for de novo fibrillation. Such secondary nucleation amplifies plaque development correlated with various diseases. Therefore, a versatile and non-destructive method of detection and differentiation between distinct fibrillar structures is of great importance. Amyloids exhibit unique optical properties, i.e. green-blue autofluorescence, which can also be induced by two-photon excitation. Herein, we use this label-free technique to resolve local fibrillar ordering in amyloid superstructures – spherulites. With polarization-dependent two-photon excited amyloid autofluorescence, we resolved fibrillar orientation in the spherulite corona and discussed the presence of amorphous aggregates, distorted fibrils or amyloid intermediate species within the spherulite core. Our polarization sensitive two-photon microscopy investigations are supported by TEM imaging and provide a promising tool for the detection and differentiation between well-developed amyloid fibrils and amorphous/distorted structures present at different stages of the formation of amyloid superstructures and plaques.
Two-photon fluorescence microscopy (2PFM) provides high axial resolution because fluorophores outside of the focal plane are not excited, and it has lower scattering, reduced angular selection, lower phototoxicity of imaging and deeper optical penetration in comparison to one-photon excitation fluorescence microscopy techniques.10,11 Therefore, 2PFM is indispensable for in vivo imaging and has been already implemented in an AD mouse model, where the significance of near-infrared probes (NIR) for deep-tissue imaging was demonstrated.12 Moreover, polarization sensitive two-photon fluorescence microscopy (ps-2PFM) was already proven to be successful in the determination of the orientational ordering of thioflavin-T (ThT) stained amyloid fibrils by our group,13 being in good agreement with the one-photon polarization analysis of the Brasselet group.4 However, well known amyloid staining dyes ThT and Congo red (CR) as well as many new fluorophores designed to stain amyloids display increased fluorescence due to hindrance in the free rotation of the dyes upon binding or molecular-docking to β-sheet structures.14 Thus, the binding mechanism hinders the sensitivity of ThT and CR for fibrillar intermediates. Therefore, the development of new probes for the detection of various forms of amyloids other than fully developed fibrils is of great importance.15
Amyloids, even in protein systems devoid of aromatic amino acids, possess unique optical properties, i.e. blue-green autofluorescence (AF), with a mechanism which is still not fully understood.16,17 This autofluorescence in amyloids can also be induced by two-photon excitation, which provides new opportunities for in vivo bio-imaging.18,19 Imaging based on the intrinsic fluorescence of amyloids is beneficial, since it is highly dependent on the aggregation state and may contain structural information, disturbed or not detected by fluorescent probes.20 Our group has already contributed to the field and reported two-photon excited polarized amyloid autofluorescence (2PAF) in bovine insulin fibrils.13 Herein, we further explore 2PAF as a versatile tool for resolving three-dimensional fibrillar organization and most importantly – ordering in amyloid spherulites, which are spherical structures (from 5 to 150 μm in diameter) built from β-sheet rich amyloidogenic protein aggregates, whose origin and biological role are still poorly described.18,21 Amyloid spherulites were found in the post-mortem brains of AD, PD and Creutzfeldt–Jakob disease patients.21 Moreover, due to the tissue preparative methodology (thin sectioning) spherulites may be overlooked in ex vivo samples.22 They present a unique structure, where the non-birefringent core is radially decorated by highly ordered fibrils.23,24 Thus, they contain amyloid fibrils at various stages of organization. Herein, we show that ps-2PFM can provide information about fibril orientation and ordering in individual spherulites, which are complex and densely packed and have a wet environment, which is important in the translation of the technique to in vivo conditions. We present the aberrations of the conical distribution of the emission dipole of 2PAF in amyloid spherulites as a novel means to detect amyloid fibrils and amyloid intermediate state orientation and molecular ordering.
Cones constructed from black (Φ) and green arrows (Ψ + ΔΨ, where Ψ is set to 29° and is constant and ΔΨ is ranging from 15° to 31°) are plotted in Fig. 2a and point the position of amyloid fibrils in the XY microscopic plane which corresponds to spots starting from the structure core and localized along the spherulite radius (as denoted by a white arrow on the grey scale I2PF map). The presented results confirm the radial orientation of amyloid fibrils in the highly organized areas of spherulites (cones no. 5–9), being consistent with the observations of Krebs et al.23 However, the differences in the direction (Φ) and size of plotted cones (Ψ + ΔΨ) are visible between points no. 1–4, 5–7 and 8–9. Thus, three regions of distinct organization were observed on the spherulite radius (Fig. 1b). The first (cones no. 1–3) is located within the spherulite core, and two (cones no. 5–7, and 8–9) in the spherulite inner and outer corona, respectively. The possibility to measure highly polarized 2PAF within the spherulite core, where fibrils are not expected to be present, raises a question about the origin of autofluorescence and will be addressed in further paragraphs.
In order to quantitatively determine the degree of ordering in various regions of a spherulite, we extracted ΔΨ values from the polarization analysis in selected points across un-labeled spherulite radii and compared them with the data from the polarization analysis of the 2PF of ThT-labeled spherulites (Fig. 2b). As previously reported, ThT binds perpendicularly to the β-strands of amyloid fibrillar structures (i.e. parallel to the amyloid fibril long axis), and thus it reproduces fibril orientation.25,26
Based on 2PF intensity profiles and the sigmoidal shape of ΔΨ value plots (black curves, Fig. 2b), three regions of distinct fibrillar orientation can be observed, corresponding to the core- (yellow shading – R1), inner- (red shading – R2) and outer-corona (blue shading – R3) for ThT-labeled and label-free spherulites. ΔΨ values decrease radially from the core to the periphery, i.e. the outer-corona region, as presented in Fig. 2b. The degree of fibril organization is inversely proportional to ΔΨ, and thus we can indicate the unorganized core and highly organized periphery of a spherulite. High disorder in the R1 region is clearly visible, with the Ψ + ΔΨ average value equal to 70° and 64.5° for 2PAF and ThT 2PF, respectively. Ordering increases between the R2 and R3 regions, where Ψ + ΔΨ values are equal to 51.5° and 53° for 2PAF and ThT 2PF, respectively. Moreover, the ΔΨ values of 2PAF seem to change more drastically in the R2 region, in comparison to ΔΨ assigned to the 2PF of ThT. The sigmoidal shape of the ΔΨ (R) plots in both cases reveals the complex structure of amyloid spherulites where a transition from the unorganized core (R1) to the highly organized outer corona (R3) is preceded by the intermediate state with fibrils at various states of organization (R2).
Intensity profiles across the unlabeled and ThT-stained spherulites of similar sizes are presented in Fig. 3. The ThT 2PF intensity clearly decreases by ∼80% near to the amorphous core, where the 2PAF intensity decreases only by ∼60%. Amyloid spherulites may grow from the nucleus, which is in the form of amorphous aggregates, or starting from the collapse and disorganization of the fibrils.23 As all fibrils present autofluorescence, disorganized fibrils in the spherulite core are probably well detected by 2PAF in our experiments. However, disorganization and collapse of the fibrils may be responsible for the significant decrease of ThT fluorescence intensity in the core. Due to the binding modes of ThT, the intermediate states of fibrils cannot be properly stained,27 which is further confirmed by extensive research on the improvement of imaging agents to detect amyloid accumulation.9 High 2PAF allowing the estimation of the molecular ordering degree in the spherulite core might also be assigned to amorphous and distorted structures or even oligomeric species present in the initial stages of the formation of amyloid fibrils and superstructures.28
In order to support our findings, we decided to compare the fibrillar structure of spherulites probed via ps-2PFM and transmission electron microscopy (TEM). The amyloid spherulite solution for TEM imaging was fixed, dehydrated, embedded in a resin and cut in ultra-thin (80 nm) sections. Detailed TEM sample preparation description is available in the Experimental section. At low magnifications, the spherulite outer border did not stand out sharply from the background. However, it can be determined whether the observed cross-section runs through the center of the spherulite or only through its edge. In the case of an eccentric cross-section, the fibrous structure and amorphous structures of the core are not clearly visible. The correct structure of the diameter cross-section through the spherulite can be observed in Fig. 4a. Larger magnifications allowed for a precise description of the ultrastructure (Fig. 4b), where four regions can be distinguished. The characteristic structural regions are marked as I–IV in Fig. 4b. The core (I) consists of tightly entangled and disorganized fibrils which are arranged in micrometric-wide, parallel strands. Moreover, highly contrasted areas consisting of non-fibrillar shapes are also clearly visible (Fig. 4f), which may be identified as amorphous aggregates. The tightest packing on the scale of the entire TEM imaged spherulite has a radius of around 5 μm. As the fibers move away from the core, they form a radial, but partially tangled and densely packed structure (II), which gives way to a loosely packed and more organized fibrillar structure (III). The rising degree of organization may be explained by secondary nucleation on or between the already grown fibrils, which raises questions about spherulite formation mechanisms. In the spherulite outer region fibrils bend by 45° (IV). The parallel arrangement of the fibrils is present together with fibrils oriented in multiple directions. Region no. IV of the spherulite is about 1.5 μm thick, and its outer surface is about 300 nm thick. It can be concluded that the core is tightly packed (Fig. 4f) and the density of the radially organized structures (Fig. 1e) decreases with the distance from the core. The density increases again only after the fibrils fold parallel to the outer surface (Fig. 4d) and increases even more in the outer shell, separating the interior from the environment (Fig. 4c). One should note that TEM sample preparation, including dehydration, influences the observed structures despite fixation. Removal of water may contribute to the formation of a shell. An intense fibril twist should be easily detected by varying the polarization of incident light. However, fibrillar bending near the spherulite edge was not observed in the samples under investigation with ps-2PFM, which supports the hypothesis of structural changes induced only in TEM imaging by fixation and dehydration.
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Fig. 4 (a) TEM macroscopic view of spherulites in the central cross-section. (b) Cross-section fragment with an example of a fibril course (arrows) and characteristic elements of the structure: I – a densely packed core consisting of a micrometric width of bundles of tangled fibrils and intermediate states, II – a tightly packed area of tangled fibrils, III – a loosely packed area of fibrils, and IV – shell forming fibrils. Magnified view of (c) IV, (d) III, (e) II, and (f) I regions. The panoramic TEM image of the entire structure is available in the ESI (Fig. S2†). |
The spherulite core observed by TEM (region I) is densely packed and consists of a micrometric width of bundles of tangled fibrils and intermediate states. Fibrils from the core are disorganized and probably distorted structurally, which explains a high decrease of ThT 2PF in this region. However, the distortion of the fibrils and the presence of intermediate states still allow autofluorescence, and thus high 2PAF is detected for the corresponding region under ps-2PFM (i.e. R1). Previous results of optical microscopy correlated with the Raman scattering spectroscopy of spherulites published by the A. M. Donald group29 show that the β-sheet content in the spherulites varies from 75% near the edge to 60% in the core. The random coil content is ranging from 15% to 25% near the edge and in the core, respectively, and the remaining percentage is assigned to α-helix structures. Our experiments are in good agreement with these observations since a significant β-sheet percentage content in the spherulite core may be assigned to the fibrils detected by TEM imaging and the high values of ΔΨ observed for this region may originate from the amorphous structures or intermediate fibrillar structures, and therefore distinguish these states from the fully developed fibrils.
Observations of the spherulite inner and outer corona under TEM are in agreement with ps-2PFM, where two regions of slightly different fibril orientation (Φ angle) were detected (R2 and R3, which correspond to region no. II, and III from TEM imaging, respectively). Region no. III, of the lowest density (R3 from ps-2PFM), is characterized by the highest degree of organization where clearly visible fibrils are radially oriented. Region II, of high density, corresponds to the inner-corona region (R2 from ps-2PFM) and is more disordered, therefore fibril presence and orientation are harder to determine from the TEM image, which is in good agreement with the higher ΔΨ values (in comparison to III, R3) from ps-2PFM.
The structural diversity of amyloid fibrils is nowadays linked to different pathologies, as the amount of evidence is rapidly growing.30 Recognition of the intermediate states of protein aggregates, at various stages of organization, is limited due to the insufficiency of current methodologies, usually based on the staining procedure further dependent on the dye to fibril binding mechanisms. Numerous intermediate states and amorphous structures can induce distortion detected by polarization analysis, being simultaneously non-reflected by the interaction with staining agents, which is advantageous if structure dependent two-photon excited autofluorescence is used. Based on sedimentation experiments and the constant density of the spherulites with respect to their radius, Rogers et al.31 suggested that the space in the spherulite corona must be filled by branched structures, otherwise a constant density over the entire structure cannot be maintained. However, in our results amyloid branching is not observed via TEM or ps-2PFM imaging. Both imaging techniques revealed radial orientation of fibrils within superstructures, which corresponds well to the results obtained by T. Hiramatsu et al. based on the coincided direction of the dark sections and that of the analyzer axis under a polarized light microscope.32
To further discuss the observed variations of ΔΨ within the radius of a single aggregate, we suggest that spherulites should be considered as dense and heterogenous structures filled with amyloids at various states of aggregation, concentration and organization. Differences between the core and superstructure corona revealed by our ps-2PAF analysis correspond well to the combined FLIM and micro-FTIR studies by G. De Luca et al., where H-bond coupling differed and changed in dependence of the position within a single spherulite indicating its intrinsic heterogeneity.33 Moreover, in situ Raman imaging of amyloid aggregates by M. Ishigaki et al. confirmed the presence of various polymorphs within insulin spherulite-like structures, based on the analysis of the relative proportion of β-sheet structures, the intensity ratio of the tyrosine doublet and the signal intensity arising from the disulfide bonds.34 A drastic drop of the ThT fluorescence intensity near the core suggests that even though mature fibrils may be present there, the dye is not capable of properly staining them. We hypothesize that the aforementioned limitation may arise from the lack of accessibility of ThT molecules to fibrils formed de novo inside the core, or due to distortion of the binding sites of polymorphs formed in the initial state of superstructure growth. Therefore, non-negligible heterogeneity of the spherulites detected within sub-micron spatial resolution may arise from multiple interconnected aggregation pathways. The coherent ps-2PFM and TEM images of the bovine insulin spherulite structure suggest a secondary nucleation event in the amyloid superstructure formation process. Differences between the inner- and outer-corona regions distinguished by ΔΨ, as well as the packing density visible under TEM imaging, may arise from colinear fibril growth between the initially formed ones or the de novo formation from fibril derived oligomers. What is more, TEM observations confirmed the presence of unorganized and probably highly distorted fibrillar structures in the spherulite core, which correspond to high 2PAF and the decrease of ThT 2PF.
PD | Parkinson's disease |
AD | Alzheimer's disease |
ThT | Thioflavin-T |
AF | Autofluorescence |
ps-2PFM | Polarization-sensitive two-photon fluorescence microscopy |
TEM | Transmission electron microscopy |
2PF | Two-photon fluorescence |
ND | Neurodegenerative diseases |
2PFM | Two-photon fluorescence microscopy |
CR | Congo red |
2PAF | Two-photon autofluorescence |
Footnote |
† Electronic supplementary information (ESI) available: Polarized light optical microscopy images of unlabeled and ThT-labelled spherulites with crossed polarizers and the panoramic TEM image of the entire spherulite structure (PDF). See DOI: 10.1039/d1bm01768c |
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