Anand N.
Narayanappa
a,
Supreeth
Nagendran
*b and
P. Vishnu
Kamath
a
aDepartment of Chemistry, Central College, Bangalore University, Bangalore 560 001, India. E-mail: supreethn4@gmail.com
bDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
First published on 16th March 2021
Rapid precipitation of the hydroxide phase from a mixed metal nitrate solution comprising Ca2+ and Al3+ ions leads to the formation of a one-layered hexagonal polytype of [Ca–Al] layered double hydroxide. In contrast, slow precipitation results in a three-layered polytype of rhombohedral symmetry. Both polytypes comprise a stacking of positively charged metal hydroxide layers having the composition [Ca2Al(OH)6(H2O)2]+. The Ca2+ ions are seven coordinated with water molecules providing the seventh coordination. In the absence of any prior knowledge of the structure of the 1H polytype, translationengleiche and klassengleiche graphs were used to arrive at the space group and atom positions of the 1H polytype. Rietveld refinements of the structures of the two polytypes show that nitrate ions are intercalated in the interlayer gallery with its molecular plane inclined to the metal hydroxide layer. The angle of inclination in the 1H polytype (∼61°) is greater than that in the 3R polytype (∼30°). When the 1H polytype is completely dehydrated, the metal hydroxide layers undergo a rigid translation relative to one another resulting in (i) a 1H → 3R interpolytype transition, and (ii) the grafting of the nitrate ion to the metal hydroxide layer to satisfy the seventh coordination of the Ca2+ ion. The as-prepared 3R polytype has a mixed anion interlayer comprising nitrate and hydroxyl ions. On heating, this phase progressively loses crystallinity before decomposition.
Evidence from NMR spectroscopy5,6 and powder diffraction7,8 showed that the trivalent cation (M) is ordered with respect to Mg2+ ions in the metal hydroxide layers. Cation ordering reduces the symmetry of the metal hydroxide layer (layer group P1m). Using the cation-ordered metal hydroxide layer as the building block, the three-layered polytypes of rhombohedral symmetry (3R1 and 3R2), were shown to be one-layered polytypes of monoclinic symmetry (1M1/1M2) (space group C2/m) in which the stacking of the metal hydroxide layers is non-orthogonal (β ∼ 96°–106°), and the layers are translated by (±a/3, 0, z) relative to one another.9,10
The Ca2+-containing hydrocalumite-like LDHs are different from the better known hydrotalcite-like LDHs, as the Ca2+ ion is seven-coordinated. The seventh coordination is with the intercalated water molecule in the interlayer. To facilitate bonding with the intercalated water molecule, the Ca2+ ion is displaced to an acentric position away from the plane of the Al3+ ions. The resulting metal hydroxide layer [Ca2M(OH)6(H2O)2]+ is puckered. Although the layer group is the same as that in the cation-ordered hydrotalcite-like layer, not all stacking sequences are valid for the [Ca–Al] layer, as the puckered structure offers steric hindrance. The restriction on translation severely limits the diversity of polytypes in the [Ca–Al] LDHs. The best known hydrocalumite-like LDH with intercalated Cl− ions, also known as Friedel's salt, crystallizes as a three-layered rhombohedral polytype (space group R), in which the metal hydroxide layers are translated by (1/3, 2/3, z) relative to one another.11 The composition of Friedel's salt is [Ca2Al(OH)6(H2O)2]Cl. Hydrocalumite-like LDHs with other anions such as Br−, I−, ClO4−, and SO42−-hereinafter abbreviated to the symbol [Ca–Al–A] (A = anion), have also been assigned to the structure of the 3R polytype (space group R
).12–14
Among all the anions, the NO3− ion is unique in that its orientation depends on the layer charge as well as the degree of hydration. In the hydrotalcite-like LDH system, the NO3− ion is intercalated with its molecular plane parallel to the metal hydroxide layer when the layer charge is low (x ≤ 0.25). At high layer charge (x = 0.33), the nitrate ion orients itself with its molecular plane nearly perpendicular to the metal hydroxide layer.15 A similar change in the orientation of the intercalated nitrate ion is also brought about with a variation in the degree of hydration of the interlayer.16 Within the hydrocalumite system, there is relatively less work reported on the nitrate-intercalated LDHs, possibly due to the poor affinity of the metal hydroxide layer for the NO3− ion. In an earlier study, the [Ca–Al–NO3] LDH has been reported to be a two-layered polytype (space group Pc1).17 In this work, the synthesis and structure refinement of the [Ca–Al–NO3] LDH is undertaken to study the polytypism if any, inherent to this system, and study the structural changes induced as a function of temperature and humidity.
The 3R polytype of [Ca–Al–NO3] LDH was synthesized by slow addition (0.1 mL min−1) of the mixed metal nitrate solution ([Ca]/[Al] = 2, total concentration = 0.39 M) to a reservoir of NaNO3 solution (80 mL) containing ten times the stoichiometric excess of NO3− ions. A solution of NaOH (2 M) was dispensed using a Metrohm Model 836 Titrando, operating in the pH STAT mode. The pH of the reaction mixture was maintained at 11.5 at 60 °C. N2 gas was bubbled during precipitation and ageing to minimize carbonate contamination. At the end of the precipitation, the slurry was aged in the mother liquor under N2 blanket for 18 h under stirring. The precipitates were centrifuged, washed with boiled Type II water (specific resistance 15 MΩ cm, Millipore Academic water purification system), and dried in a hot air oven at 60 °C.
As the first step in the structure refinement procedure, the layer to layer relationship was established by the simulation of the major Bragg reflections using code DIFFaX. These simulations facilitated the construction of a partial structure model comprising the most probable stacking sequence of the metal hydroxide layers. In the next step, the position and orientation of the intercalated nitrate anions were determined using Code FOX (Free Objects for Crystallography). Within the formalism employed in Code FOX, the nitrate anion is introduced as a free molecule into interlayer space and is permitted to randomly translate and rotate. After each step, the PXRD pattern is calculated and compared with the observed pattern. A Monte Carlo process is used to minimize the error. The various R parameters are used as error functions. A sufficient number of steps are carried out to fully explore the entire volume of the interlayer space. The position and orientation of the nitrate ion are periodically visualized to monitor the nonbonding contact distances between the nitrate ion and the metal hydroxide layer. In this process, the structure is optimized in direct space and a structure model is generated. This structure model is exported into code GSAS (General Structure Analysis System) to complete the refinement conventionally in reciprocal space. Where required difference Fourier maps are evaluated to account for the missing electron density and locate water molecules. CSD-1991917 (1H polytype), -1991904 (dehydrated 3R polytype), and -1991916 (as-prepared 3R polytype) contain the supplementary crystallographic data for this manuscript. These data can be obtained free of charge from “The Cambridge Crystallographic Data Center” through http://www.ccdc.cam.ac.uk/structures.
![]() | ||
Fig. 1 A schematic representation of the synthesis, structure, and temperature/humidity induced polytypism in (a) 1H, and (b) 3R polytypes of [Ca–Al–NO3] LDH. |
Chemical analysis of the two phases carried out by a combination of different independent techniques showed that the [Ca2+]/[Al3+] ∼ 2, the nominal value in both the phases. The 1H polytype showed a [Al3+]/[NO3−] ∼ 1, close to the nominal value, whereas this ratio was ∼0.5 in the 3R polytype. In the absence of any other anion, as evidenced by ion chromatography and infrared spectroscopy (see Fig. S2 for IR spectra, ESI†), the nitrate deficiency was compensated by the inclusion of hydroxyl ions in the interlayer. Taken together with intercalated water content estimated by TGA (Fig. S3, ESI†), the approximate formulae of the two LDHs were found to be [Ca2Al(OH)6]NO3·2H2O and [Ca2Al(OH)6](NO3)0.5(OH)0.5·2H2O for 1H and 3R polytypes respectively (Table 1). The morphology of both the 1H and 3R polytypes comprises hexagonal platelets with a small degree of edge deformation (Fig. S4, ESI†).
Polytype | Ca2+ (mol%) | Al3+ (mol%) | NO3− (mol%) | Total mass loss (%) | Approximate formula |
---|---|---|---|---|---|
Values in the parentheses correspond to the nominal composition. | |||||
1H | 0.67 (0.67) | 0.33 (0.33) | 0.33 (0.33) | 48.0 (46.9) | [Ca2Al(OH)6]NO3·2H2O |
3R | 0.67 (0.67) | 0.33 (0.33) | 0.17 (0.33) | 47.0 (42.7) | [Ca2Al(OH)6](NO3)0.5(OH)0.5·2H2O |
(i) What is the plausible space group?
(ii) Since the structure of the metal hydroxide layer is known, can a partial structure model be constructed?
(iii) How are the intercalated nitrate ions and water molecules packed in the interlayer?
Among the hydrotalcite-like LDHs, the cation ordered mineral pyroaurite [Mg–Fe–CO3] was found to crystallize in the P63/mcm space group.2 This structure is a 2H1 polytype in which successive metal hydroxide layers are related by a mirror plane. If a single metal hydroxide layer is represented by the symbol P and its mirror image by , the stacking sequence in mineral pyroaurite is ⋯P
P
⋯. In an earlier study, the nitrate-intercalated hydrocalumite-like LDH was also assigned to a two-layered polytype of hexagonal symmetry within the space group P
c1.17 In the P
c1 space group, the successive layers are related by inversion symmetry. The P
c1 space group appears as a subgroup in the translationengleiche graphs of two hexagonal summits, namely, P63/mcm, and P6/mcc.18
The PXRD pattern of the 1H polytype reported here could be simulated by stacking the [Ca–Al] metal hydroxide layer using the stacking vector (0, 0, 1) (see Fig. S5, ESI†). This shows the stacking sequence is ⋯PPP⋯ and successive layers are not related to one another either by reflection or by inversion. The space group of the 1H polytype should therefore be a subgroup of Pc1. Elimination of the c-glide yields the P
space group (Scheme 1) in both summits.
The hydrocalumite-like LDHs with intercalated Cl−, Br−, or ClO4− anions have been assigned to R space group. The P
is related to R
by the klassengleiche relationship18 due to the common crystal class. The following transformations in the special positions are observed.
R![]() |
P![]() |
|
---|---|---|
Ca, H2O | 6c (0, 0, z) | 2c (0, 0, z), 2d (1/3, 2/3, z) |
Al | 3a (0, 0, 0) | 1a (0, 0, 0) |
In the R space group, Al3+ occupies the 3a (0, 0, 0) position while Ca2+ occupies the 6c (2/3, 1/3, z) position (symmetry equivalent to (0, 0, z)). In the P
space group, the rhombohedral 3a reduces to a site of lower degeneracy of 1a (0, 0, 0), and the rhombohedral 6c (0, 0, z) splits into two sites of lower degeneracy of 2c (0, 0, z) and 2d (1/3, 2/3, z). The placement of Al3+ at 1a (0, 0, 0) and Ca at 2d (1/3, 2/3, z) in P
provides for the correct composition. The O atom of the intercalated water molecule is also placed at 2d (1/3, 2/3, z) to satisfy its relationship with the position of the Ca2+ ion. The O atom of the OH− ion was placed in the general 6g (x, y, z) site and the coordinates were refined to generate the approximate bond lengths and bond angles of the metal hydroxide layer.
In this manner, a partial structure model for the 1H polytype was constructed, and input into code FOX.19 The nitrate ion was introduced into the interlayer space as a free molecule (N–O bond length 1.26 Å; bond angle 120°) and allowed to translate and rotate. The N atom of the nitrate ion was confined midway in the interlayer space (z = 0.5) to eliminate crystal chemically unphysical positions. After each step, the powder diffraction pattern was computed and compared with the observed pattern and the error was minimized using a Monte Carlo procedure. The goodness of fit parameters, Rp and Rwp were used as error functions. This procedure amounts to structure optimization in direct space and provides an approximate structure model in situations where none exists. The structure optimization was terminated at Rp = 0.07, and Rwp = 0.15. The structure model obtained at this stage was exported to code GSAS20 for completing the refinement in the reciprocal space. An orientation parameter was introduced to correct for the residual intensity under the basal reflections (00l). The resulting Rietveld fit obtained after refining the position of Ca2+, hydroxyl O atom (Oh), and intercalated water (Ow) yields a featureless difference profile (Fig. 2 and Tables 2, 3). The refined structure (Fig. 3) shows that the nitrate ion is oriented with its molecular plane inclined at ∼61° to the metal hydroxide layer. The bond lengths and bond angles (Table S2, ESI†) show that two of the three oxygen atoms of the nitrate ion (ON2 and ON3) are strongly hydrogen-bonded to the metal hydroxide layer (ON2–Oh 2.59 Å; ON3–Oh 2.66 Å). ON3 is also strongly hydrogen-bonded to the intercalated water (ON3–Ow 2.36 Å).
As-prepared | Dehydrated | |
---|---|---|
a March–Dollase orientation parameters along 001a, 200b, 003c and 2-10d planes respectively. | ||
Molecular formula | [Ca2Al(OH)6][NO3]·2H2O | [Ca6Al3(OH)6][NO3]3 |
Crystal symmetry | Trigonal | Rhombohedral |
Space group |
P![]() |
R![]() |
Cell parameters | a = 5.74 Å; c = 8.62 Å | a = 5.75 Å; c = 23.98 Å |
Volume of the cell (Å3) | 246.95 | 685.96 |
Data points | 3750 | 3652 |
Parameters refined | 35 | 42 |
Orientation parametera | 0.41a, 0.48b | 0.68c, 1.94d |
R wp | 0.13 | 0.12 |
R p | 0.10 | 0.10 |
R(F2) | 0.16 | 0.14 |
χ 2 | 2.1 | 3.1 |
Atom type | Wyckoff position | x | y | z | Occupancy |
---|---|---|---|---|---|
Ca | 2d | 1/3 | 2/3 | 0.06542 | 1.0 |
Al | 1a | 0 | 0 | 0 | 1.0 |
Oh | 6g | −0.05528 | 0.24071 | 0.12113 | 1.0 |
Ow | 2d | 1/3 | 2/3 | 0.36265 | 1.0 |
N | 6g | 0.53146 | 0.36294 | 0.5 | 0.167 |
ON1 | 6g | 0.72582 | 0.34849 | 0.46385 | 0.167 |
ON2 | 6g | 0.53637 | 0.48380 | 0.63231 | 0.167 |
ON3 | 6g | 0.32777 | 0.25787 | 0.40300 | 0.167 |
![]() | ||
Fig. 4 A Rietveld fit of the PXRD pattern of the 3R polytype obtained by the dehydration of the 1H polytype of [Ca–Al–NO3] LDH. |
Atom type | Wyckoff position | x | y | z | Occupancy |
---|---|---|---|---|---|
Ca | 6c | 1/3 | 2/3 | 0.02305 | 1.0 |
Al | 3a | 0 | 0 | 0 | 1.0 |
Oh | 18f | 0.30494 | 0.06787 | 0.04376 | 1.0 |
N | 18f | 0.16021 | 0.04897 | 0.51814 | 0.167 |
ON1 | 18f | 0.42726 | 0.15943 | 0.51963 | 0.167 |
ON2 | 18f | 0.03469 | −0.07875 | 0.47833 | 0.167 |
ON3 | 18f | 0.04655 | 0.12311 | 0.54944 | 0.167 |
(i) The slow precipitation was carried out at high pH (11.5) thus exposing the LDH slurry to a preponderance of OH− ions in the mother liquor.
(ii) The intercalated nitrate ion is known to be a good leaving group in anion exchange reactions.
(iii) The intercalated OH− ions form strong hydrogen bonds with the metal hydroxide layer and have the capacity to exchange protons with intercalated water.
All these factors operate synergistically to promote nitrate exchange for hydroxyl ions from the solution. The total mass loss observed in the TGA profile (observed 47%, expected 42.7%) supports the NO3−–OH− mixed anion composition of the interlayer. Structure refinement was carried out by the methodology already described using a combination of codes FOX and GSAS, by fixing the anion site occupancy to the experimentally determined anion composition. The resulting Rietveld fit (Fig. 6 and Table 5) is satisfactory with acceptable R values. The molecular plane of the nitrate ion is inclined to the plane of the metal hydroxide layer at ∼30° (Fig. 7 and Table 6). One of the oxygen atoms of the intercalated nitrate ion (ON2) is within H-bonding distances of the metal hydroxide layer (Table S4, ESI†).
Molecular formula | [Ca2Al(OH)6][NO3]0.5(OH)0.5·2H2O |
---|---|
a March–Dollase orientation parameters along 003a, and 202b planes respectively. | |
Crystal symmetry | Rhombohedral |
Space group | R 3 |
Cell parameters | a = 5.75 Å; c = 25.46 Å |
Volume of the cell (Å3) | 729.80 |
Data points | 3546 |
Parameters refined | 35 |
Orientation parametera | 0.38a, 0.5b |
R wp | 0.14 |
R p | 0.11 |
R(F2) | 0.10 |
χ 2 | 5.3 |
Atom type | Wyckoff position | x | y | z | Occupancy |
---|---|---|---|---|---|
Ca | 6c | 2/3 | 1/3 | 0.0203 | 1.0 |
Al | 3a | 0 | 0 | 0 | 1.0 |
Oh | 18f | 0.24503 | −0.03009 | 0.03361 | 1.0 |
Ow | 6c | 2/3 | 1/3 | 0.11865 | 1.0 |
N | 18f | 0.63117 | 0.05927 | 0.17018 | 0.083 |
O1 | 18f | 0.57481 | 0.19306 | 0.14388 | 0.111 |
O2 | 18f | 0.45803 | −0.19091 | 0.17143 | 0.111 |
O3 | 18f | 0.85657 | 0.12686 | 0.18301 | 0.111 |
On heating the LDH, the PXRD pattern shows a steady compression of the non-00l reflections, showing turbostratic disorder, before the complete breakdown of the structure (Fig. S8 (ESI†) and Fig. 1b).
The 1H and 3R polytypes differ from one another in the stacking sequence of the metal hydroxide layers. While in the 1H polytype, the metal hydroxide layers stacked one above another [stacking vector (0, 0, 1)], in the 3R polytype, successive layers are rigidly translated relative to one another by (1/3, 2/3, z)/(2/3, 1/3, z). The choice of the stacking sequence, from among the complete universe of possibilities is determined by the symmetry of the anions and the strength of their interaction with the metal hydroxide layers. Anions generally mediate the stacking, by choosing a stacking sequence which provides interlayer sites of local symmetry which match their molecular symmetry.23
Within the hydrocalumite-like structure, the local symmetry of the interlayer sites is determined by the six closely spaced hydroxyl ions, three each chosen from adjacent metal hydroxyl layers lining the interlayer gallery is the same in both the 1H and 3R polytypes (C3 and D3d). Thereby, the strength of bonding between the metal hydroxide layers and the interlayer atoms is comparable in both polytypes, so that the nucleation of one in preference to the other is determined by kinetic rather than thermodynamic factors. This also generates the possibility of interpolytype transitions driven by small changes in temperature and/or humidity. This work demonstrates the conversion of 1H → 3R polytype, upon temperature-induced dehydration involving a rigid translation of the metal hydroxide layers relative to one another. Rigid translation of the layers requires relatively less energy. Consequently, the 1H polytype on temperature-induced dehydration gives the 3R polytype. This transformation is reversible and occurs on rehydration in the ambient condition. The as-prepared 3R polytype on heating loses crystallinity and decomposes without undergoing any interpolytype transition. This behaviour is attributed to the presence of intercalated OH− ions in a mixed anion interlayer. The strong hydrogen bonding of the intercalated hydroxyl ions anchors the metal hydroxide layer, thereby preventing rigid translation of the layers.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d1nj00148e |
This journal is © The Royal Society of Chemistry and the Centre National de la Recherche Scientifique 2021 |