Laura
Bereczki
*ab,
Amit
Zodge
c,
Márton
Kőrösi
c,
Tamás
Holczbauer
ad,
Sourav
De
a,
Edit
Székely
c and
Petra
Bombicz
a
aChemical Crystallography Research Laboratory, Research Centre for Natural Sciences, Hungary. E-mail: nagyne.bereczki.laura@ttk.hu
bPlasma Chemistry Research Group, Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Hungary
cDepartment of Chemical and Environmental Process Engineering, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Budapest, Hungary
dOrganocatalysis Research Group, Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary
First published on 7th July 2021
The number of crystal structures of diastereomeric salt pairs and especially of double salts is limited in the literature. This work exceptionally presents the structures of two constitutional isomer double salts along with their related diastereomeric salt pairs, which were successfully crystallized and their structures elucidated presenting two complete sets of chiral systems. These results provide a deeper insight into chiral recognition and contribute to the mastery of synthon engineering. The investigated systems are 1-cyclohexylethylammonium 2-chloromandelate (S–S, R–S, SS–SR) and 1-cyclohexylethylammonium 4-chloromandelate (R–R, S–R, SS–SR). The crystal structures and the thermal properties of all diastereomers (including the less stable diastereomers) and double salts have been determined and comparatively analysed. In the crystal of five of the six chiral salts, hydrogen bonded layers are formed with the participation of the ionic groups and the hydroxyl group of the mandelate anion. In one structure, the hydrogen bond layers are closed to form tubes. Due to the different position of the chlorine substituent in the two compound families, the halogen interactions are oriented towards the inside of the hydrogen-bonded structures or positioned between the layers and establish a relatively strong connection between them. The two different halogen positions and every possible combinations of configurations in the six investigated salts provide a quite detailed landscape of the effect of stereochemistry on the solid-state structure of the salts.
In the case of a racemic mixture of enantiomers, the crystalline phase may contain a 1 to 1 mixture of the crystals of the pure enantiomers, that is a conglomerate or the 1 to 1 ratio of the enantiomers in a crystal called a racemate.1–5 The formation of the racemate is much more probable than that of the enantiomeric crystals. The pure enantiomers can only crystallize in one of the 65 non-enantiogenic Sohncke space groups which contain only rotations, rototranslations and translations that is a notable restriction. Meanwhile the racemate crystals may have mirror plains or inversion centres which are statistically much preferred during the crystal formation.
In an optical resolution procedure via diastereomeric salt formation an optically active resolving agent is also present beside the racemic mixture of the targeted compound. During the resolution experiment two diastereomeric salts may be formed in different ratios. In addition, by analogy of the above, there is also the possibility to obtain a crystalline salt that contains both enantiomers of the starting compound in 1 to 1 ratio and the resolving agent in optically pure form. Formation of such a so called double salt6–8 is not so favoured by symmetry considerations, however other factors may promote its formation. The presence of the double salt during the optical resolution process practically sets the enantiomeric excess to zero in the product.
The detection of the double salt is possible using DSC technique by the analysis of the crystals received by the evaporation of the solvent from the resolution mixture. The double salt is an independent compound that has only one sharp individual melting peak on the DSC curve. On the other hand, the 1 to 1 mixture of the crystals of the diastereomers gives two melting peaks on the DSC curve. Powder X-ray diffraction is also a suitable method for the investigation of the 1:
1 ratio phase. The powder X-ray diffractogram of the 1
:
1 ratio physical mixture of the two diastereomers is the sum of the diffractograms of the diastereomers. In case of the double salt, an entirely different powder diffractogram is measured. Nonetheless, the most unambiguous evidence for the existence of the double salt is when one has its crystal structure in hand.
Racemic 1-cyclohexylethylamine can be successfully resolved with mandelic acid,9O-methylmandelic acid with 1-cyclohexylethylamine10 and para-chloromandelic acid with phenylethylamine.11,12 Therefore, it could be presumed that 1-cyclohexylethylamine would be a suitable resolving agent for the optical resolutions of 2- and 4-chloromandelic acids (the interchange of the resolving agent and the racemic compound leads to a mirrored system and therefore the experimental results are comparable). Both of them are intermediates in the production of important bioactive or medical compounds. 2-Chloromandelic acid is a key intermediate for the anti-thrombotic agent clopidogrel which is an antiplatelet agent to treat coronary artery and vascular diseases.11–14 4-Chloromandelic acid is an important intermediate in the synthesis of drugs against diabetes and lipid disorders.15
We found that practically there was no enantiomer discrimination in neither of the two chloromandelic acid resolutions with 1-cyclohexylethylamine resolving agent. In both cases a double salt at 1 to 1 R- and S-chloromandelic acid ratio was found. The crystal structures of the diastereomers and the double salts have been determined and the structural data used for the explanation of the crystallization properties of the substances. The number of crystal structures of diastereomeric salt pairs16–18 or double salts19 is limited in the literature. The extensive structural study of the isomeric 1-cyclohexylethylammonium chloromandelate salts fills a niche in this field and gives a deeper insight in chiral recognition during crystallization.
The directed manipulation of the supramolecular packing architecture, e.g. synthon engineering harmonises electrostatic interactions and spatial requirements as far as it is possible. A chiral centre in a molecule introduces barriers to molecular flexibility, limits the formation of supramolecular interactions of functional groups by spatial restrictions to the given molecular configuration. The origin of the difficulty of the formation of diastereomeric crystals can be traced back to the role of the molecular shape which hampers the formation of structural patterns. In case of the presented 1-cyclohexylethylammonium 2-chloromandelate [(S)-(1-cyclohexylethyl)ammonium (S)-2-chloromandelate (HOM-2), (R)-(1-cyclohexylethyl)ammonium (S)-2-chloromandelate (HET-2) and (S)-(1-cyclohexylethyl)ammonium (R,S)-2-chloromandelate (DOB-2)] as well as of 1-cyclohexylethylammonium 4-chloromandelate [(R)-(1-cyclohexylethyl)ammonium (R)-4-chloromandelate (HOM-4), (S)-(1-cyclohexylethyl)ammonium (R)-4-chloromandelate (HET-4) and (S)-(1-cyclohexylethyl)ammonium (R,S)-4-chloromandelate (DOB-4)] salts we uniquely have in hand two completed series, the structures of the two diastereomers and the double salt of an organic salt in both cases, thus all the three possible combinations of the molecular configurations were available for the comparison (Scheme 1).
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Scheme 1 Formulae diagrams and configurations of 2-chloromandelic acid, 4-chloromandelic acid and 1-cyclohexylethylamine in the salts. |
Diastereomeric salts were prepared from an equimolar mixture of 60 mg (S)-(−)-2-chloromandelic acid and 40 mg (S)-(+)- or (R)-(−)-1-cyclohexylethylamine and from an equimolar mixture of 60 mg (R)-(+)-4-chloromandelic acid and 40 mg (S)-(+)- or (R)-(−)-1-cyclohexylethylamine from a saturated dichloromethane solution by precipitation with hexane. The precipitates were filtered out and washed with hexane.
The double salts were crystallized from an equimolar mixture of 60 mg racemic 2- or 4-chloromandelic acid and 40 mg (S)-(+)-1-cyclohexylethylamine from a saturated dichloromethane solution by precipitation with hexane. The precipitates were filtered out and washed with hexane.
2-Chloromandelic acid | 4-Chloromandelic acid | |
---|---|---|
Solvent | ee% | ee% |
Methanol | 0.0 | 1.8 |
n-Propanol | 3.2 | 1.5 |
Toluene–ACN 1![]() ![]() |
5.7 | 2.2 |
Sample | HOM- 2 | HET- 2 | DOB- 2 | HOM- 4 | HET- 4 | DOB- 4 |
---|---|---|---|---|---|---|
Solubility in DCM mg sample/ml DCM | 300(20) | 440(50) | 10.4(6) | 4.6(2) | 9.0(4) | 3.2(1) |
What is surprising in the solubility data is that the solubility of HOM-2 and HET-2 is by two orders of magnitude larger than that of the other isomers. All investigated compounds are constitutional or optical isomers with ionic interactions in their solid phase and such a difference in the solubility is not foreseeable. However, these results are in very good agreement with the thermoanalytical data since the melting enthalpy of the same compounds (HOM-2 and HET-2) is unusually low (Table 3) taking into account that these are ionic compounds. The trends of the solubility data are in very good agreement with the melting enthalpies especially within one set of compounds. The melting points do not correlate with the solubility data.
Sample | HOM- 2 | HET- 2 | DOB- 2 | HOM- 4 | HET- 4 | DOB- 4 |
---|---|---|---|---|---|---|
Melting point/°C | 137.0(2) | 124.8(2) | 146.6(2) | 156.3(2) | 153.0(2) | 137.6(2) |
Melting enthalpy/kJ per mole | 13.2 | 13.7 | 36.9 | 30.4 | 25.7 | 39.8 |
The melting enthalpies of HOM-2 and HET-2 are particularly low showing the weakness of the secondary intermolecular interactions in the diastereomeric crystals as compared to the double salt (DOB-2) or to the para-substituted isomers.
The melting point of the less soluble diastereomer (HOM-2 and HOM-4) is higher than that of the more soluble diastereomer (HET-2 and HET-4) in both cases, as it was expected. The melting enthalpy of the HOM-2 and HET-2 diastereomers is unusually low which is in good agreement with the outstandingly high solubility of HOM-2 and HET-2.
The melting point of DOB-2 is higher whereas the melting point of DOB-4 is lower than the melting points of the diastereomers. The melting enthalpy of the double salt is considerably higher than that of the related diastereomers in both cases.
The homochiral and less soluble diastereomers (HOM-2 and HOM-4) crystallize in the orthorhombic crystal system in P212121 space group. The heterochiral diastereomers (HET-2 and HET-4) and the double salts (DOB-2 and DOB-4) crystallize in the lower symmetry monoclinic system in space groups P21 or C2. HOM-2 has considerably higher crystal density than its optical isomers. The crystal density is not significantly different in case of HOM-4, HET-4 and DOB-4 isomeric salts.
The asymmetric units of the less soluble diastereomers (HOM-2 and HOM-4) contain the minimal one ion pair, Z′ = 1. On the other hand, the asymmetric units of the more soluble HET-2 and HET-4 contain four ion pairs (Z′ = 4) (Fig. 3). The molecular geometries of the four different ion pairs are slightly different and in HET-2, the rings are disordered. The multiplication of the ion pairs in the asymmetric unit and the disordered apolar molecular parts reveal difficulties in the crystal packing of the heterochiral diastereomers.
In the case of the double salts, at least two ion pairs are necessarily present in the asymmetric unit, a homochiral and a heterochiral one. In the case of the diastereomers, the crystals are built up of homochiral cations and of homochiral anions. The chirality of the anion and cation can be identical (homochiral diastereomer) or different (heterochiral diastereomer). While in the double salt the anions are present in both configurations. In the crystals of DOB-4, the minimal 2 ion pairs are observed in the asymmetric unit. However, in the asymmetric unit of DOB-2, four ion pairs are present (increased Z′) and some of the cyclohexyl rings are disordered (Fig. 4).
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Fig. 4 Asymmetric units of DOB-2 and DOB-4 (chirality of the ion pairs is marked on the figure, hydrogens are omitted for clarity). |
In some combinations of the configurations, the crystal packing is less favourable, the positions of the anions and cations may become uncertain (disorder in HET-2 and DOB-2) and diversified (increased Z′ in HET-2, HET-4 and DOB-2) concerning mainly the apolar rings of the ions. Indeed, the crystallization of the heterochiral diastereomers was difficult and their crystals had low rigidity.
The packing arrangements of the heterochiral salts are more complicated. In the HET-2 structure, the columns are built up of alternately placed anion–cation pairs. Four columns are connected together by hydrogen bonds to form one-dimensional hydrogen-bonded units. In the HET-4 structure, similarly to the homochiral structures, anion and cation columns are formed parallel to the a axis and hydrogen bonded 2D layers parallel in the ab plane are also formed. In the case of the heterochiral salts, every second anion and cation have different conformation since HET-2 and HET-4 have four ionpairs in their asymmetric units.
DOB- 2 and DOB-4 have similar crystal packings. Here, we can find again the anion and cation columns, which are present as well in the structure of the homochiral salts. In the case of the double salts, the columns run along the c crystallographic axis and hydrogen-bonded planes are formed in DOB-2 in the ac plane and in DOB-4 in the bc plane. Within the columns, every second anion has opposite chirality and every second cation with the same chirality has different conformation. The main difference in the structures is that in DOB-2, two-fold screw axes are running perpendicular to the hydrogen-bonded 2D layers while in DOB-4, two-fold screw axes and two-fold rotation axes are in the 2D layers or parallel to them, between the layers.
The arrangement of the ions in the crystal lattice and the hydrogen-bond network is basically changed in the homochiral HOM-2 and HOM-4 salts with the chlorine substitution as compared to the homochiral corresponding non-halogenated derivative (S)-1-cyclohexylethylammonium (S)-2-chloromandelate (QEMZIS9). QEMZIS has one dimensional hydrogen bonded chains which incorporate only the ionic functional groups of the ions. The complexity of the hydrogen bond pattern is much reduced as compared to the chlorinated derivatives, only R24(8) rings (which appear in the double salts as well) and R12(4) rings of secondary interactions and intramolecular hydrogen bonds of the hydroxyl group are present (Fig. S1†). This polar core is then covered with an apolar shell consisting of phenyl and cyclohexyl rings. In the case of QEMZIS, the hydroxyl group of the mandelic acid does not take part in the main hydrogen bond network of the structure. The cohesion of these one-dimensional units is supported by C–H⋯O hydrogen bonds between the hydroxyl and cyclohexyl groups and C–H⋯π aromatic interactions between the chains. In the case of HOM-2 and HOM-4, the polar groups are arranged in two dimensional layers and the participation of the hydroxyl groups in the hydrogen bond system is increased (Fig. 6). In HOM-2, no notable secondary interactions can be found between the hydrogen bonded layers. In HOM-4, due to the para position of the chlorines, inter-layer C–H⋯Cl bonds (C14–H14B⋯Cl1, symm. op. 1/2 − x, −y, 1/2 + z) are formed.
In HOM-2, the hydrogen bond network is built up of R35(13), R23(9) and small R12(4) rings (Fig. S2†). In HET-2, unlike in any other chlorinated isomers, one-dimensional hydrogen bonded columns are formed. Symmetric R44(12) (Fig. S3†) and R24(8) rings (Fig. S4†) connecting two anions and two cations are characteristic patterns and additionally the R32(6) rings appear. The anions form dimers via R22(10) rings (Fig. S3†). In the HOM-4 structure, the main hydrogen bond pattern is again different and consists of R34(10) and R34(11)rings. Small R21(5) rings are also present (Fig. S5†). In HET-4, the hydrogen bond pattern consists of one large ring, R35(13) (similar to HOM-2) and several small and slightly different hydrogen bonded rings R23(7), R23(8), R33(8), R34(8) (Fig. S6†) as well as R12(4) and R21(5) rings similar to those in the other structures.
In the DOB-2 structure, the main characteristics of the hydrogen bond pattern are large R46(18) rings (Fig. S7†) formed with the participation of four anions and two cations. The large rings are connected by R24(8) rings including two anions and two cations. The R21(5) ring, R32(6) ring and R12(4) ring mentioned at the diastereomeric salts are also present in this structure. In the DOB-4 structure, a very similar hydrogen bond network is formed that is built up of the same hydrogen bonded rings. The chirality of the DOB-2 and DOB-4 double salts is the same and they form similar hydrogen bond pattern in spite of the different spatial position of the chlorine substituent (ortho or para). In the crystal lattice of the double salts, R46(18) rings form 2 dimensional honeycomb-like hydrogen bond structures which are very similar for DOB-2 and DOB-4 (Fig. 7).
It can be seen based on the graph-set analysis of the hydrogen bond interactions of the optical isomers that very different patterns are evolved depending on the spatial position of the hydrogen donor and acceptor groups within the ions. The functional groups of the ions are the same in all of the structures however, the hydrogen bond interactions and thus, the supramolecular synthons that are formed in the different structures and that can be efficiently described by the different graph-set descriptors, are very diversified depending on the spatial arrangement of the functional groups within the ions.
In HOM-4, the para-chlorine atoms form chlorine rich layers between the 2D hydrogen bonded polar layers however, chlorine⋯chlorine interactions are not formed. C(14)–H(14A)⋯Cl1 (3.04 Å) and C(16)–H(16A)⋯Cl1 (3.14 Å) hydrogen bonds stabilize the layered structure. In HET-4, chlorine–chlorine halogen bonds (Cl1A⋯Cl1D 3.397(6) Å, 168.7° and Cl1B⋯Cl1C 3.562(7) Å, 147.5(5)°) contribute to the stability of the parallel hydrogen bonded layers.
The main difference of the DOB-2 and DOB-4 double salts can be traced back to the halogen interactions of the ortho- and para-chlorine substituent (Fig. 9). In DOB-2, the chlorine atoms turn back to the hydrogen bond system and strengthen it by a O(1)⋯Cl(1) interaction (O(1B)⋯Cl(1A) 3.193(10) Å, O(1C)⋯Cl(1D) 3.378(10) Å) formed with a carboxylate oxygen. In DOB-4, the chlorine atoms form a chlorine rich layer on the outer apolar surfaces of the 2D hydrogen bonded units allowing the formation of Cl(1)⋯Cl(1) halogen bonds (3.341(2) Å, 164.21(18)°) between the layers.
Φ 1 | Φ 2 | Φ 3 | |
---|---|---|---|
QEMZIS | −39 | 74 | 61 |
HOM- 2 | 39.2(3) | −71.2(3) | 52.9(3) |
HET- 2 | 86(1) | −83(1) | −48(1) |
45(2) | −100(1) | −50(1) | |
62(2) | −80(1) | −52(1) | |
49(2) | −90(1) | −50(2) | |
DOB- 2 | 45(2) | −64(2) | −63(2) |
−28(2) | 69(2) | −66(2) | |
42(2) | −58(2) | −62(2) | |
−31(2) | 69(2) | 25(4) | |
HOM- 4 | −31(2) | 70(2) | 73(2) |
HET- 4 | −14(2) | 83(2) | −70(2) |
−7(2) | 78(2) | −66(2) | |
−39(2) | 69(2) | 70(2) | |
−60(2) | 84(2) | 59(2) | |
DOB- 4 | 31.7(5) | −49.9(5) | −83.5(4) |
−25.7(5) | 31.9(5) | 76.6(4) |
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Fig. 10 Hirshfeld surfaces and fingerprint plots calculated for ion pairs in the diastereomeric salts (the Hirshfeld surfaces were mapped over dnorm which is the contact distance of the atoms normalised by their van der Waals radii, calculated by Crystal Explorer software,40 the ionpairs are represented in the way that the carboxylate and ammonium moieties are placed in the same position). |
In HET-2, the spatial positions of the intermolecular interactions showed by the Hirshfeld surfaces are rather similar in the cases of the four ionpairs however, differences can be observed in the shapes of the surfaces. In HET-2, the spatial arrangements of the strong interactions remain similar in all four ionpairs, the differences show up mainly in the position of the apolar molecular moieties. In HET-2 and HOM-2, the steric arrangements of the strong interactions are quite different.
In case of DOB-2 and DOB-4, Hirshfeld surfaces have been calculated for a homochiral and a heterochiral ionpair in each structure (Fig. 11b and 12b) and additionally for the two ionpairs together (Fig. 11a and 12b). The positions of the close contacts showed by the Hirshfeld surfaces in the case of the two double salts are quite similar which could be expected on the basis of the very similar hydrogen bonded systems. However, there are some slight differences. The fingerprint plots are much more symmetric in DOB-4, the internal (di) and external (de) distances are similar whereas in DOB-2, marked differences can be observed between these values. In DOB-4, the light blue regions in the fingerprint plots are more marked than in DOB-2 thus, the number of short interactions is higher in the DOB-4 structure.
In both structures, the Hirshfeld surfaces of the two diastereomeric ionpairs are nearly mirror images of each other. Their interactions in the double salts are not similar to those of the ionpairs in the diastereomeric salts.
Properties of the Hirshfeld surfaces of the optical isomers (Table S3†) and the percentage of the total Hirshfeld surface area of the short interactions of the different atom types (Table S4) are listed in the ESI.†
The halogen substitution has unexpectedly and ultimately changed the outcome of the optical resolution. The ortho-chloro substitution strengthen the polar region of the crystal lattice with its interactions. The para-chloro substitution makes possible to form halogen bonds between the apolar layers of the crystal lattice. The different chirality of the molecules and thus the different molecular shapes directly influence the system of secondary interactions and the interaction strengths in the crystal lattice. These differences then appear on the macroscopic level as well. Depending on the position of the chlorine substituent, large difference in the solubility and melting enthalpy data is experienced.
Hirshfeld surface analysis was used to get a graphic description of the molecular shapes and the strength and spatial arrangement of the intramolecular interactions.
Halogen substitution of a chiral compound, and thus the possibility of the formation of halogen bonds in the crystal lattice import a determining factor in the crystal formation during optical resolution via diastereomeric salt formation. The halogen interactions overwrite even the main hydrogen bonding pattern and a basically different structure may be produced. It can be deduced, that in the case of halogenated compounds, the selection of the resolving agent should not be carried out solely based on hydrogen bonding considerations.
The supramolecular synthons in the case of the salts with the same constitution but variable configuration are the same. In the two diastereomeric and the double salt, all possible mutual spatial arrangement of the synthons is realised. The different spatial arrangement of the synthons leads to the realization of different solid phase properties. The diversity of the isomeric structures comes from the different ability of the given combination of mirror image molecules to form strong intermolecular interactions and close packed structures. In the case of some combinations of the configurations, the crystal formation is hampered and disordered molecular fragments or multiple ion pairs appear in the asymmetric unit.
Structure–property relationship could be established in the two sets of compounds. The structural analyses correspond well with thermal and solubility properties. The structural features and supramolecular interactions reveal the reason of the poor enantiomer discrimination in the optical resolution experiments and differences in macroscopic properties, like solubility, melting temperature and enthalpy of the salts.
Footnote |
† Electronic supplementary information (ESI) available. CCDC 2059730–2059735. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d1ce00145k |
This journal is © The Royal Society of Chemistry 2021 |