Open Access Article
This Open Access Article is licensed under a
Creative Commons Attribution 3.0 Unported Licence

Facile approach to benzo[d]imidazole-pyrrolo[1,2-a]pyrazine hybrid structures through double cyclodehydration and aromatization and their unique optical properties with blue emission

Gi Hun Bae a, Suzi Kimb, Na Keum Leeb, Anuradha Dagara, Jeong Hwa Leea, Jeeyeon Lee*b and Ikyon Kim*a
aCollege of Pharmacy, Yonsei Institute of Pharmaceutical Sciences, Yonsei University, 85 Songdogwahak-ro, Yeonsu-gu, Incheon, 21983, Republic of Korea. E-mail: ikyonkim@yonsei.ac.kr; Fax: +82 32 749 4105; Tel: +82 32 749 4515
bCollege of Pharmacy, Research Institute of Pharmaceutical Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea. E-mail: jyleeut@snu.ac.kr; Fax: +82 2 884 8334; Tel: +82 2 880 2471

Received 27th January 2020 , Accepted 10th February 2020

First published on 18th February 2020


Abstract

A modular approach to polycyclic N-fused heteroaromatics is described. Acid-catalyzed reactions of various 1-(2-oxo-2-arylethyl)-1H-pyrrole-2-carbaldehydes with several o-phenylenediamines provided facile access to a number of new benzo[d]imidazole-pyrrolo[1,2-a]pyrazine hybrid structures through double cyclodehydration and aromatization. Optical characterization of the synthesized compounds revealed unique emission properties, with deep blue emission in the aggregated and solid states, and a dramatic substituent effect was observed. Fusion of an additional benzene ring into the benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine scaffold resulted in a remarkable increase in the intensity of blue fluorescence from the solution along with good cell permeability and negligible phototoxicity, indicating the potential for bioimaging applications.


Introduction

Novel organic fluorophores are critical tools in biomedical research and play an important role in disease diagnosis and bioimaging applications.1–4 Due to the detrimental aggregation-caused quenching (ACQ) effects of conventional fluorophores, various approaches to achieve stable and efficient emission have been explored.5,6 Along this line, aggregation-induced emission (AIE) and aggregation-induced emission enhancement (AIEE) have drawn much attention recently, as dramatic enhancements of emission in the aggregated or solid state have been observed.7–9 Although AIE luminogens have shown the potential to prevent quenching at high concentrations or in the solid state, practical issues remain, such as solubility and cell permeability, which need to be overcome to facilitate practical applications, particularly in various bioassays.6 Furthermore, the AIE effect has challenged our current understanding of the photophysical properties of photoluminescence. Therefore, novel fluorophores with unique photophysical features are of great significance in practical applications. Blue or deep-blue emissive materials are particularly valuable in organic light-emitting diodes (OLEDs), but good blue or deep-blue emitters (AIEgens) are still rare due to their wide energy gaps.10–13

Among the approaches reported to date, combinatorial synthesis approaches with high content imaging screening systems have shown great advantages to effectively accelerate the development of novel emissive materials, since the context of the cellular system is unpredictable in terms of the permeability, photostability and cytotoxicity of fluorophores.14,15

Nitrogen-fused heterocycles are an important structural motif frequently found in a number of natural products, pharmaceuticals, and dyes. Among them, a number of N-fused 5,6-ring systems, such as imidazo[1,2-a]pyridine,16 indolizine,17 and pyrazolo[1,5-a]pyrimidine,18 have received much attention, as shown in Fig. 1.


image file: d0ra01140a-f1.tif
Fig. 1 Nitrogen-fused heteroaromatics.

Accordingly, numerous synthetic methods for these scaffolds have been well established, including ring annulation and intermolecular cross-coupling.19–22 Although a number of medicinal agents based on pyrrolo[1,2-a]pyrazine, another N-fused heterobicyclic system, have been disclosed in the literature, synthetic approaches to prepare this scaffold have been relatively underdeveloped, which prompted us to investigate the chemistry of pyrrolo[1,2-a]pyrazine. In this context, we have been involved in the design and synthesis of new chemical spaces based on the pyrrolo[1,2-a]pyrazine core (Scheme 1). As a means to decorate the basic skeleton via intermolecular cross-coupling reactions, we have studied Pd-catalyzed direct (hetero)arylation23,24 and electrophilic acetylation/formylation25,26 of various pyrrolo[1,2-a]pyrazines (2), which were easily prepared by double cyclodehydration of 1 in the presence of NH4OAc (Scheme 1a). More recently, we have developed atom-economical synthetic routes to prepare novel pyrrolo[1,2-a]pyrazine derivatives (6–7) from 5 via tandem ring cyclization sequences (Scheme 1b).27 Ammonium acetate was used as an amine source for 2, 6, and 7. As an extension, we hypothesized that o-phenylenediamine might be employed in the reaction with 5 as an alternative amine source, leading to pyrrolo[1,2-a]pyrazine-fused polycyclic heteroaromatic compound 8 (Scheme 1c). There is only one literature example, by Nagarajan and coworkers, on the synthesis of this heterocyclic core in which N-propargyl-substituted pyrrole-2-carboxaldehydes were used under Cu catalysis.28 While this method gave rise to the desired products with a methyl group at the C6 position, reactions with unsymmetrical o-phenylenediamines resulted in a mixture of regioisomers. Moreover, regioisomeric mixtures were obtained with arylpropargyl-substituted substrates as a result of incomplete isomerization. In contrast, our strategy could lead to the target skeleton with not only methyl but also various aryl moieties at the C6 site, demonstrating versatility of our method. Since an additional functional group can be introduced to the α position of the ketone of our substrate 5, we deemed that our approach to this skeleton would be more flexible, affording a wide variety of derivatives with substituent(s) at the C5 and/or C6 site(s). Mechanistically, dehydrative condensation of o-phenylenediamine with the aldehyde of 5 would form dihydrobenzo[d]imidazole, which would further react with other carbonyl moieties in 5 to give rise to tetracyclic compound 8 after air oxidation. Overall, we anticipated that a polycyclic heteroaromatic ring system would be constructed by a one-pot domino protocol consisting of double cyclodehydration and aromatization.


image file: d0ra01140a-s1.tif
Scheme 1 Synthetic approaches to N-fused heterocycles.

Furthermore, as we expected that the tetracyclic skeleton formed as a hybrid structure of benzo[d]imidazole and pyrrolo[1,2-a]pyrazine,29–32 two versatile pharmacophores in medicinal chemistry, might exhibit intriguing photophysical properties, we decided to embark on the synthesis and optical characterization of this scaffold, which is described herein.

Results and discussion

Design and synthesis

The reaction was optimized with 5a33 and o-phenylenediamine (Table 1). Reactions in AcOH or AcOH/toluene (1[thin space (1/6-em)]:[thin space (1/6-em)]1) at 90 °C gave 8a in 54–55% yields (entries 1 and 2). While the use of DBSA (dodecylbenzenesulfonic acid) or PTSA as a catalyst improved the yield of 8a (entries 3–5), reactions in the presence of a Lewis acid furnished the product at a yield of 32–55% (entries 6–8). Finally, we were pleased to find that desired product 8a was obtained in 80% yield by initial treatment of 5a and o-phenylenediamine in TFA/DMSO at room temperature for 8 h followed by warming at 65 °C for an additional 3 h (entry 9).34 The reaction in a closed vial gave similar results as that in open air. Intermediate I was identified at room temperature, and subsequent heating facilitated dehydrative cyclization to furnish 8a.
Table 1 Reaction optimizationa

image file: d0ra01140a-u1.tif

Entry Catalyst (equiv.) Solvent Temperature (°C) Yieldb (%)
a A mixture of 5a (0.188 mmol) and o-phenylenediamine (0.244 mmol, 1.3 equiv.) in solvent (1 mL) was stirred at the indicated temperature for 12 h. The reaction mixture was stirred at rt for 16 h.b Isolated yield (%).c After a mixture of 5 (0.188 mmol) and o-phenylenediamine (0.244 mmol, 1.3 equiv.) in TFA (0.056 mmol, 0.3 equiv.)/DMSO (1 mL) was stirred at rt for 8 h, the reaction mixture was stirred at 65 °C for an additional 3 h.
1 AcOH 90 54
2 AcOH/toluene (1[thin space (1/6-em)]:[thin space (1/6-em)]1) 90 55
3 DBSA (0.1) DMF 150 60
4 DBSA (0.1) Toluene 130 63
5 PTSA (0.1) Toluene 130 62
6 In(OTf)3 (0.1) DCE 90 47
7 Sc(OTf)3 (0.1) DCE 90 32
8 Bi(OTf)3 (0.1) DCE 90 55
9c TFA (0.3) DMSO rt to 65 80


As shown in Table 2, reactions of 5a with several o-phenylenediamines were performed under optimized conditions to furnish the corresponding 6-arylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazines (8a–8g) in good to excellent yields. Notably, the use of unsymmetrical o-phenylenediamines such as 4-fluoro-o-phenylenediamine and 4-chloro-o-phenylenediamine under these conditions gave rise to regioisomers 8c and 8e, respectively. The structure of 8c was unambiguously confirmed by X-ray crystallographic analysis (CCDC number: 1919367, Fig. 2). 6-Phenylnaphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8h) was obtained from the reaction with 2,3-diaminonaphthalene.

Table 2 Synthesis of 8a–8ha,b

image file: d0ra01140a-u2.tif

a After a mixture of 5a (0.188 mmol) and o-phenylenediamine (0.244 mmol, 1.3 equiv.) in TFA (0.056 mmol, 0.3 equiv.)/DMSO (1 mL) was stirred at rt for 8 h, the reaction mixture was stirred at 65 °C for an additional 3 h.b Isolated yield (%).
image file: d0ra01140a-u3.tif image file: d0ra01140a-u4.tif image file: d0ra01140a-u5.tif
image file: d0ra01140a-u6.tif image file: d0ra01140a-u7.tif image file: d0ra01140a-u8.tif
image file: d0ra01140a-u9.tif image file: d0ra01140a-u10.tif  



image file: d0ra01140a-f2.tif
Fig. 2 Crystal structure of 8c.

More diverse benzo[d]imidazole-pyrrolo[1,2-a]pyrazine hybrids (8i–8ai) were synthesized with 5b–i. The results are shown in Table 3, exhibiting a wide range of functional group tolerances under these reaction conditions. DBSA/toluene was used in some cases where TFA/DMSO afforded low chemical yields (8n, 8p, 8v, 8x, and 8y).

Table 3 Synthesis of 8i–8aia

image file: d0ra01140a-u11.tif

5 8 Yieldb (%)
a After a mixture of 5 (0.188 mmol) and o-phenylenediamine (0.244 mmol, 1.3 equiv.) in TFA (0.056 mmol, 0.3 equiv.)/DMSO (1 mL) was stirred at rt for 8 h, the reaction mixture was stirred at 65 °C for an additional 3 h.b Isolated yield (%).c After a mixture of 5 (0.188 mmol), o-phenylenediamine (0.244 mmol, 1.3 equiv.), and DBSA (0.0188 mmol, 0.1 equiv.) in toluene (1 mL) was stirred at 130 °C for 12 h.
5b (R2 = 4-FC6H4) image file: d0ra01140a-u12.tif 8i 65
5b image file: d0ra01140a-u13.tif 8j 45
5b image file: d0ra01140a-u14.tif 8k 87
5c (R2 = 4-ClC6H4) image file: d0ra01140a-u15.tif 8m 86
5c image file: d0ra01140a-u16.tif 8n 70c
5c image file: d0ra01140a-u17.tif 8o 81
5c image file: d0ra01140a-u18.tif 8p 63c
5c image file: d0ra01140a-u19.tif 8q 72
5d (R2 = 4-BrC6H4) image file: d0ra01140a-u20.tif 8r 68
5d image file: d0ra01140a-u21.tif 8s 78
5d image file: d0ra01140a-u22.tif 8t 84
5e (R2 = 4-MeOC6H4) image file: d0ra01140a-u23.tif 8u 73
5e image file: d0ra01140a-u24.tif 8v 54c
5e image file: d0ra01140a-u25.tif 8w 91
5e image file: d0ra01140a-u26.tif 8x 51c
5e image file: d0ra01140a-u27.tif 8y 63c
5e image file: d0ra01140a-u28.tif 8z 81
5f (R2 = 2,5-(MeO)2C6H3) image file: d0ra01140a-u29.tif 8aa 78
5f image file: d0ra01140a-u30.tif 8ab 81
5g (R2 = 4-PhC6H4) image file: d0ra01140a-u31.tif 8ac 85
5g image file: d0ra01140a-u32.tif 8ad 58
5g image file: d0ra01140a-u33.tif 8ae 63
5h (R2 = 2-naphthalene) image file: d0ra01140a-u34.tif 8af 75
5h image file: d0ra01140a-u35.tif 8ag 57
5h image file: d0ra01140a-u36.tif 8ah 79
5i (R2 = Me) image file: d0ra01140a-u37.tif 8ai 80


The basic tetracyclic hybrid skeleton 9 was also obtained, although conversion of 5g to 9 required a higher reaction temperature (Scheme 2). When 10, derived from indole-2-carbaldehyde, was allowed to react with o-phenylenediamine, the corresponding hexacyclic 11 was obtained in quantitative yield. As noted in the Introduction, benzo[d]imidazole-pyrrolo[1,2-a]pyrazines 13a–b bearing two substituents at the C5 and C6 sites were constructed upon exposure of 12a–b to the optimal reaction conditions, demonstrating the benefits of our protocol over the previous approach. In addition, further elaboration of the resulting 8a was conducted: N-alkylation of 8a with methyl iodide delivered the corresponding salt 14 in quantitative yield.


image file: d0ra01140a-s2.tif
Scheme 2 Synthesis of 9, 11, 13, and 14.

Optical properties and structure–property relationship analysis

We examined the optical properties of the synthesized compounds, as shown in Fig. 3 and Table S1. The compounds exhibited absorption maxima at approximately 320–360 nm and emission maxima at 400–450 nm in DMSO. Based on the optical properties, the compounds were categorized into two groups. Group A compounds possess a benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine scaffold (named 4BP), whereas Group B compounds include 6-phenylnaphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazines and 7-phenylbenzo[4′,5′]imidazo[2′,1′:3,4]pyrazino[1,2-a]indoles (named 5BP). Representative compounds are shown in Fig. 3 along with their absorption and emission spectra. In Group A, pyrrolo[1,2-a]pyrazines without an aromatic ring at the C6 position showed strong blue emission in solution (8ai), but they were not emissive in the solid state due to the ACQ effect. The addition of benzene or naphthalene groups at the C6 position decreased the emission intensity, but the emission maxima were red-shifted (Table S1).
image file: d0ra01140a-f3.tif
Fig. 3 Absorption spectra (a) of 10 μM and emission spectra (b) of 1 μM 8c, 8g, 8h, 8i, 8z, 8ai, and 11 measured in DMSO.

Further structure–property relationship analysis revealed that the fluorescence intensity and emission maxima were significantly affected by attaching different substituents to the R1 and R2 positions of the benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine scaffold (Fig. S1a). When attaching an electron-withdrawing halide to the R1 position (8d, Fig. S1b), the fluorescence intensity increased, and a hypsochromic shift was observed relative to 8a (Fig. S1a). However, by attaching an electron-donating –CH3 group to R1, as shown for 8g (Fig. S1c), the opposite effect occurred, that is, a bathochromic shift. 8m with 4-ClC6H4 group at the C6 position (Fig. S1d) exhibited a slight bathochromic shift (∼10 nm) compared to 8a, while 8u with 4-MeOC6H4 group at R2 (Fig. S1e) showed blue-shifted emission with increased intensity. Overall, the electronic effect from the electron-withdrawing R1 and the electron-donating substituent on the phenyl ring of R2 was found to be important for enhancing the fluorescence intensity in Group A.

Extension with an additional benzene ring in Group B, which includes 6-phenylnaphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazines (8h) and 7-phenylbenzo[4′,5′]imidazo[2′,1′:3,4]pyrazino[1,2-a]indole (11, Fig. S2), remarkably enhanced the fluorescence intensity compared to that from Group A.

Aggregation induced blue-shifted emission from Group A

Interestingly, 8c, 8g, and 8i showed an unusual hyposochromic shift in water. By increasing the water content in THF, blue-shifted emission at 362 nm was observed as the emission at 435 nm gradually decreased (Fig. 4a, b and S3). As shown in Fig. 4c and d, the absorption and emission spectra of 8g were insensitive to solvent polarity. Therefore, the observed hyposochromic shift in aqueous solutions was suggested to be more related to the aggregated state emission. Indeed, the intensity of deep-blue emission at 362 nm in 95% water in THF solution increased by 12-fold compared to that in a pure THF solution (Fig. 4b, inset). The observed blue shift was interesting since a bathochromic shift in the aggregated state is more common.35 With the addition of DMSO stock to water during sonication, moderately uniform nanoparticles were formed with a diameter of 198 nm (Fig. 5). Compared to the emission of 8g in DMSO, the emission of 8g as nanoparticles exhibited a significant blue shift by approximately 80 nm.
image file: d0ra01140a-f4.tif
Fig. 4 (a) Photographs of 10 μM 8g (0–99%) under UV light (λex = 312 nm). (b) Fluorescence spectra of 10 μM 8g in THF/water mixture (0–99%) excited at 339 nm; inset: plots of fluorescence intensity at 362 nm and 435 nm. Absorption spectra of 8g in 20 μM (c) and emission spectra in 2 μM (d) measured in various solvents.

image file: d0ra01140a-f5.tif
Fig. 5 (a) Emission spectra of 8g 10 μM nanoparticles (water[thin space (1/6-em)]:[thin space (1/6-em)]THF = 99[thin space (1/6-em)]:[thin space (1/6-em)]1, v/v) and 2 μM in DMSO (λex = 339 nm); inset: photographs of 8g nanoparticles under UV light (λex = 312 nm). (b) Particle size intensity distribution of 8g nanoparticles.

Bioimaging application with highly fluorescent 5BP series (Group B)

5BP derivatives with an additional aromatic ring exhibited strong fluorescence intensity in solution, as shown in Table 4. Their fluorescence quantum yields in solution were measured with anthracene (Φ = 0.27 in EtOH) as a standard and were as high as 56%. 7-Phenylbenzo[4′,5′]imidazo[2′,1′:3,4]pyrazino[1,2-a]indole (11, Fig. S2d) showed comparable spectral features to 6-phenylnaphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8h, Fig. S2a) but with a weaker intensity than that of 8h.
Table 4 Optical properties and quantum yield of 8h, 8k, 8z, 8ab, 8ae, 8ah, 9, and 11
Compound λabs (nm) λem (nm) εmax (M−1 cm−1) Φf
H2O EtOH DMSO
8h 360 414.0 412.5 422.0 19[thin space (1/6-em)]900 0.39
8k 361 413.5 412.5 421.5 18[thin space (1/6-em)]600 0.56
8z 360 416.5 413.0 423.0 25[thin space (1/6-em)]500 0.43
8ab 361 413.0 412.0 420.5 25[thin space (1/6-em)]900 0.42
8ae 360 415.5 416.0 425.5 16[thin space (1/6-em)]900 0.37
8ah 361 416.0 415.5 425.5 19[thin space (1/6-em)]800 0.34
9 334 355.0 353.0 356.5 29[thin space (1/6-em)]600 0.15
11 348 421.5 414.0 419.0 17[thin space (1/6-em)]300 0.25


The 5BP compounds were also tested for live cell imaging in HeLa cells using the Operetta high-content imaging system (Fig. 6). Extension with an additional aromatic ring in 8h, 8k, 8q, 8t, 8z, 8ab, 8ae, and 8ah showed bright blue fluorescence in the Operetta high-content screening system, demonstrating good cell permeability and potential for bioimaging applications. Meanwhile, extension with an additional benzene fused to the pyrrole side (11) did not induce significant cellular fluorescence. The phototoxicities of 8a, 8h, 8z, and 11 were negligible in HeLa cells, as shown in Fig. S4.


image file: d0ra01140a-f6.tif
Fig. 6 Live-cell imaging and fluorescence of HeLa cells stained with 10 μM 8h, 8k, 8q, 8t, 8z, 8ab, 8ae, 8ah and 11 for 1 h from DAPI channel. Data were collected at 410–530 nm and images were obtained by Operetta high-content imaging system. Scale bar = 100 μm.

Solid state emission and XRD analysis

As organic optoelectronic materials work in the solid state, the optical properties of BP scaffolds in the solid state were investigated and are summarized in Table 5. 8h and 11 exhibited significant red shifts of approximately 100 nm in their solid-state emission compared to those in solution, whereas 8a and 8g showed blue shifts in the solid state (Fig. 7).
Table 5 Photophysical properties of 8a, 8c, 8g, 8h, and 11 in solid state
Compound λex (nm) λem (nm) τf (ns)
8a 349 369, 495 7.11
8c 353 370, 481 5.53
8g 353 396, 496 8.31
8h 382 521 4.32
11 377 492 8.95



image file: d0ra01140a-f7.tif
Fig. 7 Fluorescence spectra of 8a (a), 8g (b), 8h (c), and 11 (d) in EtOH (2 μM, black) and solid states (blue).

Intrigued by different patterns of emission spectra induced by aggregation, we investigated the intermolecular interactions of 8c that contributed to the blue emission in the solid and nanoaggregated states. The geometry and packing arrangements were analyzed in crystal states using single-crystal X-ray diffraction (XRD) measurements (Fig. 8).


image file: d0ra01140a-f8.tif
Fig. 8 (a) Crystal structure of 8c with a torsion angle of 90.4°. (b) Antiparallel 8c molecules aligned from a side view. (c) Antiparallel molecular packing diagram with intermolecular interactions. (d) Packing structure of 8c including intermolecular interactions; yellow: CH⋯N bond (2.56 Å); purple: CH⋯N bond (2.58 Å); green: CH⋯F bond (2.73 Å).

The single crystal of 8c was depicted as a monomer, two of which were paired in an anti-parallel alignment. Notably, the torsion angle between the phenyl group and benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine was 90.4°, suppressing the conjugation between the phenyl ring and ABCD ring (Fig. 8a). As shown in Fig. 8b and c, the molecules were arranged in an antiparallel mode and columnar stacked array with an intermolecular vertical distance of 3.58 Å between two adjacent planes. Each assembled pair was separated from neighboring pairs with a contact distance of 5.09 Å between the phenyl and pyrrole plane centroids (Fig. 8d). Between the antiparallel monomers, there were intermolecular CH⋯N interactions (CH⋯N bond: 2.56 Å) with the phenyl ring and the nitrogen of the imidazole B ring (Fig. 8d), as shown by yellow lines. With the columnar stacked array, the intercolumnar contact between the imidazole (B ring) and fluorobenzene (A ring) formed intermolecular CH⋯N interactions of 2.58 Å, as shown by purple lines. Additionally, nonclassical hydrogen bonds of 8c (CH⋯F bond: 2.73 Å) incorporated the intermolecular network, rigidifying the molecular conformation, which contributed to the aggregation-induced blue shift (Fig. 8d).

Generally, in the aggregated or solid state, the emission is red-shifted by the geometry change in π-stacks from charge transfer or the formation of J-aggregates.36,37 On the other hand, solid emission at shorter wavelengths can be induced by modifying the linkage position of substituents, reducing the conjugation effect, or twisting the conformation.11 In the case of 8c, the observed blue-shifted emission was ascribed to the weakened intermolecular π–π interactions due to the longer distance between two planes in the crystal packing.38 Conformational twisting and spatial restraint also inhibited planarization. Overall, with increasing distance, the conjugation degree was reduced, which caused a blue shift in the solid and nanoparticle states of 8c.

Conclusions

In conclusion, a novel benzo[d]imidazole-pyrrolo[1,2-a]pyrazine hybrid system, benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine, was designed and synthesized via a cascade reaction consisting of double cyclodehydration and aromatization as part of our continued efforts to expand pyrrolo[1,2-a]pyrazine-based chemical space. A wide range of derivatives were readily accessed with high atom efficiency by this modular approach under mild reaction conditions. Optical characterization of the synthesized polycyclic N-fused aromatics revealed that the fluorescence intensity and emission properties were significantly affected by attaching different substituents to the R1 and R2 positions of the benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine scaffold. Among the synthesized compounds, 8c, 8g, and 8i considerably showed aggregation-induced blue-shifted emission in the solid and nanoaggregated states, which would be valuable for organic light-emitting diode (OLED) applications. Fusion with an additional benzene ring into a benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine scaffold resulted in a remarkable increase in blue fluorescence in solution along with good cell permeability, demonstrating potential for bioimaging applications.

Experimental section

General methods

Unless specified, all reagents and starting materials were purchased from commercial sources and used as received without purification. “Concentrated” refers to the removal of volatile solvents via distillation using a rotary evaporator. “Dried” refers to pouring onto, or passing through, anhydrous magnesium sulfate followed by filtration. Flash chromatography was performed using silica gel (230–400 mesh) with hexanes, ethyl acetate, and dichloromethane as the eluents. All reactions were monitored by thin-layer chromatography on 0.25 mm silica plates (F-254) visualized with UV light. Melting points were measured using a capillary melting point apparatus. 1H and 13C NMR spectra were recorded on a 400 MHz NMR spectrometer and were described as chemical shifts, multiplicity (s, singlet; d, doublet; t, triplet; q, quartet; m, multiplet), coupling constant in hertz (Hz), and number of protons. HRMS were measured with an electrospray ionization (ESI) and Q-TOF mass analyzer.

General procedure A for the synthesis of 8

After a solution of 5 (0.188 mmol) and o-phenylenediamine (0.244 mmol, 1.3 equiv.) in TFA (0.056 mmol, 0.3 equiv.)/DMSO (1 mL) was stirred at room temperature for 8 h, the reaction mixture was stirred at 65 °C for additional 3 h. The reaction mixture was quenched with H2O (10 mL) and extracted with ethyl acetate (5 mL × 3). The organic layer was dried over MgSO4 and concentrated under reduced pressure to give the crude residue, which was purified by silica gel column chromatography (hexane/EtOAc/dichloromethane = 10[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]2) to afford 8.

General procedure B for the synthesis of 8

After a solution of 5 (0.188 mmol), o-phenylenediamine (0.244 mmol, 1.3 equiv.), and DBSA (0.0188 mmol, 0.1 equiv.) in toluene (1 mL) was stirred at 130 °C for 12 h, the reaction mixture was concentrated in vacuo, diluted with H2O (10 mL), and extracted with dichloromethane (5 mL × 3). The organic layer was dried over MgSO4 and concentrated under reduced pressure to give the crude residue, which was purified by silica gel column chromatography (hexane/EtOAc/dichloromethane = 10[thin space (1/6-em)]:[thin space (1/6-em)]1[thin space (1/6-em)]:[thin space (1/6-em)]2) to afford 8.
6-Phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8a).
image file: d0ra01140a-u38.tif
White solid, mp: 219.2–220.8 °C (44.7 mg, 80%); 1H NMR (400 MHz, CDCl3) δ 7.84 (d, J = 8.0 Hz, 1H), 7.64–7.57 (m, 5H), 7.34 (d, J = 2.8 Hz, 1H), 7.29 (d, J = 7.2 Hz, 1H), 7.26 (s, 1H), 7.20 (s, 1H), 6.93 (t, J = 7.8 Hz, 1H), 6.74 (t, J = 3.0 Hz, 1H), 6.33 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.5, 143.1, 131.3, 130.5, 130.2, 130.1, 128.9, 124.4, 123.7, 121.4, 120.9, 119.4, 117.8, 113.2, 113.0, 111.7, 106.4; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H14N3 284.1182, found 284.1183.
2-(2-(1H-Benzo[d]imidazol-2-yl)-1H-pyrrol-1-yl)-1-phenylethan-1-one (I).
image file: d0ra01140a-u39.tif
Pale yellow liquid (46.5 mg, 82%); 1H NMR (400 MHz, CDCl3) δ 8.29 (s, 1H), 8.00 (d, J = 7.6 Hz, 2H), 7.60 (t, J = 7.2 Hz, 1H), 7.48 (d, J = 7.6 Hz, 2H), 6.92 (d, J = 7.6 Hz, 1H), 6.85–6.84 (m, 2H), 6.75 (d, J = 2.4 Hz, 1H), 6.66 (t, J = 7.6 Hz, 1H), 6.54 (d, J = 7.6 Hz, 1H), 6.34 (t, J = 2.8 Hz, 1H), 5.97 (s, 2H); 13C{1H} NMR (100 MHz, CDCl3) δ 193.6, 149.6, 141.3, 138.4, 134.8, 133.8, 130.3, 129.6, 128.9, 128.0, 126.4, 120.2, 118.4, 117.3, 114.9, 109.6, 55.7; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H16N3O 320.1288, found 302.1289.
9,10-Difluoro-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8b).
image file: d0ra01140a-u40.tif
White solid, mp: 223–224 °C (39.6 mg, 66%); 1H NMR (400 MHz, CDCl3) δ 7.68–7.52 (m, 6H), 7.29 (d, J = 2.8H, 1H), 7.26 (s, 1H), 7.22 (s, 1H), 6.75–6.73 (m, 1H), 6.06 (dd, J = 11,2, 7.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 149.6 (d, JC–F = 14.5 Hz), 147.4 (dd, JC–F = 37.9, 14.8 Hz), 145.1 (d, JC–F = 14.9 Hz), 144.4, 140.1 (d, JC–F = 7.9 Hz), 130.6, 130.2, 129.2, 123.3, 118.1, 117.3, 113.4, 112.1, 107.5, 106.6, 106.3 (d, JC–F = 19.8 Hz), 101.2 (d, JC–F = 24.7 Hz); HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C19H11F2N3Na 342.0813, found 342.0812.
10-Fluoro-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8c).
image file: d0ra01140a-u41.tif
Pale yellow solid, mp: 193.7–194.5 °C (34.6 mg, 61%); 1H NMR (400 MHz, CDCl3) δ 7.64–7.57 (m, 5H), 7.47 (dd, J = 9.2, 2.4 Hz, 1H), 7.33 (d, J = 3.6 Hz, 1H), 7.28 (t, J = 1.2 Hz, 1H), 7.23 (s, 1H), 6.76–6.74 (m, 1H), 6.67 (td, J = 9.2, 1.2 Hz, 1H), 6.24–6.20 (m, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 159.4 (d, JC–F = 238.5 Hz), 145.4 (d, JC–F = 12.9 Hz), 144.3, 131.0, 130.3 (d, JC–F = 5.4 Hz), 129.0, 127.1, 124.1, 120.7, 117.9, 113.3 (d, JC–F = 4.0 Hz), 113.2, 111.8, 109.6, 109.4, 106.6, 105.0 (d, JC–F = 24.0 Hz); HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C19H12FN3Na 324.0907, found 324.0912.
9,10-Dichloro-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8d).
image file: d0ra01140a-u42.tif
Yellow solid, mp: 256.2–257.1 °C (50.2 mg, 76%); 1H NMR (400 MHz, CDCl3) δ 7.87 (s, 1H), 7.68 (d, J = 7.1 Hz, 1H), 7.62 (t, J = 7.4 Hz, 2H), 7.57 (d, J = 7.2 Hz, 2H), 7.35 (d, J = 3.6 Hz, 1H), 7.30 (s, 1H), 7.27 (s, 1H), 6.75 (t, J = 7.0 Hz, 1H), 6.35 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.6, 143.9, 130.6, 130.4, 130.1, 129.5, 129.2, 127.8, 125.0, 123.9, 120.3, 120.0, 118.5, 114.2, 113.6, 112.2, 107.4; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H12Cl2N3 352.0403, found 352.0406.
10-Chloro-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8e).
image file: d0ra01140a-u43.tif
White solid, mp: 169.3–170.1 °C (35.1 mg, 56%); 1H NMR (400 MHz, CDCl3) δ 7.78 (d, J = 1.6 Hz, 1H), 7.64–7.55 (m, 5H), 7.34 (d, J = 3.6 Hz, 1H), 7.28 (d, J = 1.2 Hz, 1H), 7.24 (s, 1H), 6.89 (dd, J = 9.0, 1.8 Hz, 1H), 6.76 (t, J = 3.2 Hz, 1H), 6.21 (d, J = 9.2 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 145.5, 144.1, 131.0, 130.3, 130.2, 129.3, 129.1, 129.05, 124.1, 121.7, 120.6, 119.0, 118.1, 113.5, 113.4, 112.0, 106.9; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H13ClN3 318.0793, found 318.0791.
9,10-Dibromo-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8f).
image file: d0ra01140a-u44.tif
White solid, mp: 289.3–290.2 °C (51.5 mg, 62%); 1H NMR (400 MHz, CDCl3) δ 8.06 (s, 1H), 7.68 (t, J = 7.4 Hz, 1H), 7.62 (t, J = 7.4 Hz, 2H), 7.56 (d, J = 7.2 Hz, 2H), 7.35 (d, J = 4.0 Hz, 1H), 7.31–7.30 (m, 1H), 7.26 (s, 1H), 6.78–6.77 (m, 1H), 6.52 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.8, 144.4, 130.6, 130.2, 129.2, 123.9, 123.3, 123.29, 120.2, 119.1, 118.6, 117.3, 117.3, 116.2, 113.6, 112.3, 107.5; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H12Br2N3 439.9392, found 439.9391.
9,10-Dimethyl-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8g).
image file: d0ra01140a-u45.tif
White solid, mp: 230–231.8 °C (47.0 mg, 80%); 1H NMR (400 MHz, CDCl3) δ 7.64–7.56 (m, 6H), 7.29 (d, J = 3.6 Hz, 1H), 7.22 (d, J = 1.2 Hz, 1H), 7.16 (s, 1H), 6.72 (t, J = 3.0 Hz, 1H), 6.07 (s, 1H), 2.33 (s, 3H), 2.10 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 143.1, 142.5, 132.6, 131.5, 130.3, 130.26, 130.0, 128.9, 128.8, 124.4, 121.2, 119.4, 117.4, 113.3, 112.9, 111.3, 105.7, 20.6, 20.2; HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C21H17N3Na 334.1315, found 334.1314.
6-Phenylnaphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8h).
image file: d0ra01140a-u46.tif
White solid, mp: 232–233 °C (49.6 mg, 79%); 1H NMR (400 MHz, CDCl3) δ 8.25 (s, 1H), 7.95 (d, J = 8.4 Hz, 1H), 7.72–7.60 (m, 5H), 7.50 (d, J = 8.0 Hz, 1H), 7.44 (d, J = 3.2 Hz, 1H), 7.38 (t, J = 7.4 Hz, 1H), 7.29 (t, J = 7.2 Hz, 2H), 7.20 (s, 1H), 6.77 (t, J = 3.2 Hz, 1H), 6.70 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 146.0, 144.4, 131.3, 131.2, 130.8, 130.3, 130.2, 129.2, 129.0, 128.0, 127.8, 124.8, 124.2, 123.8, 120.5, 118.7, 115.4, 113.4, 111.0, 109.8, 108.0; HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C23H15N3Na 356.1158, found 356.1154.
6-(4-Fluorophenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8i).
image file: d0ra01140a-u47.tif
Brown solid, mp: 168–170 °C (36.9 mg, 65%); 1H NMR (400 MHz, CDCl3) δ 7.98 (d, J = 8.0 Hz, 1H), 7.63 (d, J = 4.8 Hz, 2H), 7.60 (s, 1H), 7.46 (s, 1H), 7.42–7.37 (m, 2H), 7.33 (t, J = 7.8 Hz, 2H), 7.08 (t, J = 7.8 Hz, 1H), 6.76 (s, 1H), 6.36 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 165.6 (d, JC–F = 251.1 Hz), 147.3, 140.1, 132.5 (d, JC–F = 8.5 Hz), 128.8, 126.0, 125.9, 123.5, 122.6, 120.0, 118.1, 117.2, 116.6 (d, JC–F = 21.8 Hz), 115.1, 114.1, 113.4, 110.2; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H13FN3 302.1088, found 302.1085.
9,10-Dichloro-6-(4-fluorophenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8j).
image file: d0ra01140a-u48.tif
White solid, mp: 301.4–302.5 °C (31.3 mg, 45%); 1H NMR (400 MHz, CDCl3) δ 7.88 (s, 1H), 7.58–7.55 (m, 2H), 7.35–7.30 (m, 4H), 7.24 (s, 1H), 6.78 (t, J = 3.2 Hz, 1H), 6.40 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 163.9 (d, JC–F = 250.6 Hz), 144.5, 143.9, 132.2 (d, JC–F = 8.3 Hz), 129.4, 127.9, 125.1, 122.8, 120.2, 118.6, 116.5 (d, JC–F = 21.7 Hz), 116.3, 115.8, 113.8 (d, JC–F = 2.9 Hz), 112.6, 107.5, 107.3; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H11Cl2FN3 370.0309, found 370.0311.
6-(4-Fluorophenyl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8k).
image file: d0ra01140a-u49.tif
Pale brown solid, mp: 241.5–242.2 °C (57.4 mg, 87%); 1H NMR (400 MHz, CDCl3) δ 8.25 (s, 1H), 7.50 (d, J = 8.4 Hz, 1H), 7.63 (t, J = 6.8 Hz, 2H), 7.53 (d, J = 8.4 Hz, 1H), 7.43 (d, J = 3.2 Hz, 1H), 7.39 (t, J = 7.4 Hz, 1H), 7.35–7.28 (m, 4H), 7.17 (s, 1H), 6.76 (t, J = 2.8 Hz, 1H), 6.72 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 163.8 (d, JC–F = 249.5 Hz), 145.9, 144.3, 132.3 (d, JC–F = 8.4 Hz), 131.1, 130.9, 129.2, 127.9, 127.8, 127.4, 124.3, 124.0, 123.7, 120.5, 118.8, 116.1 (d, JC–F = 21.7 Hz), 115.6, 113.5, 111.3, 109.5, 108.1; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H15FN3 352.1245, found 352.1240.
6-(4-Chlorophenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8m).
image file: d0ra01140a-u50.tif
White solid, mp: 208–209.6 °C (51.1 mg, 86%); 1H NMR (400 MHz, CDCl3) δ 7.85 (d, J = 8.0 Hz, 1H), 7.58–7.52 (m, 4H), 7.35–7.28 (m, 3H), 7.20 (s, 1H), 7.00 (t, J = 8.0 Hz, 1H), 6.76 (t, J = 6.8 Hz, 1H), 6.42 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.5, 143.0, 136.3, 131.5, 130.3, 129.8, 129.3, 123.9, 123.2, 121.6, 120.9, 119.5, 117.9, 113.4, 112.8, 112.0, 106.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H13ClN3 318.0793, found 318.0798.
6-(4-Chlorophenyl)-9,10-difluorobenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8n).
image file: d0ra01140a-u51.tif
White solid, mp: 232.7–233.4 °C (46.3 mg, 70%); 1H NMR (400 MHz, CDCl3) δ 7.60–7.51 (m, 5H), 7.30 (m, 2H), 7.21 (s, 1H), 6.76 (s, 1H), 6.20 (t, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 149.6 (d, JC–F = 14.1 Hz), 147.4 (dd, JC–F = 14.7, 14.4 Hz), 145.2 (d, JC–F = 14.9 Hz), 144.3(d, JC–F = 2.7 Hz), 140.1 (d, JC–F = 10.4 Hz), 136.8, 131.4, 129.5, 128.9, 122.6, 120.5, 118.2, 113.6, 112.4, 106.8, 106.4 (d, JC–F = 19.3 Hz), 101.0 (d, JC–F = 24.5 Hz); HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H11ClF2N3 354.0604, found 345.0608.
9,10-Dichloro-6-(4-chlorophenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8o).
image file: d0ra01140a-u52.tif
White solid, mp: 294.2–294.4 °C (58.8 mg, 81%); 1H NMR (400 MHz, CDCl3) δ 7.89 (s, 1H), 7.61 (d, J = 8.4 Hz, 2H), 7.52 (d, J = 8.4 Hz, 2H), 7.34 (d, J = 3.2 Hz, 1H), 7.30 (s, 1H), 7.22 (s, 1H), 6.78 (t, J = 3.4 Hz, 1H), 6.50 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.5, 143.9, 136.9, 131.4, 129.5, 129.3, 128.9, 128.0, 125.2, 122.7, 120.2, 118.6, 113.9, 113.8, 112.6, 107.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H11Cl3N3 386.0013, found 386.0019.
6-(4-Chlorophenyl)-9,10-dimethylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8p).
image file: d0ra01140a-u53.tif
Pale yellow solid, mp: 256.8–257.0 °C (40.8 mg, 63%); 1H NMR (400 MHz, CDCl3) δ 7.60–7.51 (m, 5H), 7.28 (d, J = 3.2 Hz, 1H), 7.23 (s, 1H), 7.15 (s, 1H), 6.73 (t, J = 3.0 Hz, 1H), 6.18 (s, 1H), 2.34 (s, 3H), 2.15 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 143.1, 142.4, 136.2, 132.8, 131.5, 130.6, 130.0, 129.1, 128.7, 123.2, 121.1, 119.6, 117.5, 113.2, 113.0, 111.6, 106.0, 20.7, 20.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C21H17ClN3 346.1106, found 346.1110.
6-(4-Chlorophenyl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8q).
image file: d0ra01140a-u54.tif
Pale brown solid, mp: 278.2–278.4 °C (49.9 mg, 72%); 1H NMR (400 MHz, CDCl3) δ 8.29 (s, 1H), 7.96 (d, J = 8.0 Hz, 1H), 7.64–7.57 (m, 5H), 7.51 (s, 1H), 7.41 (t, J = 7.2 Hz, 1H), 7.33 (s, 2H), 7.23 (s, 1H), 6.80 (s, 2H); 13C{1H} NMR (100 MHz, CDCl3) δ 136.7, 131.6, 131.0, 130.5, 129.4, 129.3, 128.3, 128.0, 127.8, 124.8, 124.7, 124.3, 123.5, 119.3, 118.3, 117.3, 115.2, 114.0, 111.9, 109.8, 109.1; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H15ClN3 368.0949, found 368.0950.
6-(4-Bromophenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8r).
image file: d0ra01140a-u55.tif
White solid, mp: 197.7–198.4 °C (46 mg, 68%); 1H NMR (400 MHz, CDCl3) δ 7.84 (d, J = 8.4 Hz, 1H), 7.72 (d, J = 8.0 Hz, 2H), 7.46 (d, J = 8.4 Hz, 2H), 7.33 (d, J = 3.2 Hz, 1H), 7.30 (d, J = 3.6 Hz, 1H), 7.26 (s, 1H), 7.19 (s, 1H), 7.00 (t, J = 7.6 Hz, 1H), 6.75 (s, 1H), 6.43 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.5, 143.0, 132.2, 131.7, 130.28, 130.27, 124.5, 123.9, 123.2, 121.6, 120.9, 119.5, 117.9, 113.4, 112.8, 112.0, 106.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H13BrN3 found 362.0287, found 362.0289.
6-(4-Bromophenyl)-9,10-dichlorobenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8s).
image file: d0ra01140a-u56.tif
Yellow solid, mp: 266.3–266.9 °C (63.2 mg, 78%); 1H NMR (400 MHz, CDCl3) δ 7.88 (s, 1H), 7.76 (d, J = 8.4 Hz, 2H), 7.46 (d, J = 8.0 Hz, 2H), 7.34 (d, J = 4.0 Hz, 1H), 7.29 (t, J = 1.2 Hz, 1H), 7.22 (s, 1H), 6.78–6.77 (m, 1H), 6.50 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.7, 144.1, 132.7, 131.7, 129.5, 128.1, 125.6, 125.4, 125.2, 122.9, 120.4, 119.2, 118.8, 114.1, 114.0, 112.8, 107.8; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C19H11BrCl2N3 429.9508, found 429.9507.
6-(4-Bromophenyl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8t).
image file: d0ra01140a-u57.tif
Brown solid, mp: 273.9–274.4 °C (64.4 mg, 84%); 1H NMR (400 MHz, CDCl3) δ 8.27 (s, 1H), 7.95 (d, J = 8.0 Hz, 1H), 7.78 (d, J = 8.4 Hz, 2H), 7.58–7.52 (m, 3H), 7.48 (d, J = 3.6 Hz, 1H), 7.40 (t, J = 7.2 Hz, 1H), 7.34 (d, J = 7.6 Hz, 1H), 7.30 (s, 1H), 7.21 (s, 1H), 6.80 (s, 1H), 6.76 (t, J = 3.2 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 132.3, 131.8, 131.0, 130.3, 129.8, 129.3, 128.1, 128.0, 127.8, 124.88, 124.86, 124.8, 124.4, 123.5, 119.5, 115.1, 114.2, 112.0, 109.9, 109.4, 109.3; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H15BrN3 412.0444, found 412.0445.
6-(4-Methoxyphenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8u).
image file: d0ra01140a-u58.tif
White solid, mp: 206.5–207.2 °C(43.0 mg, 73%); 1H NMR (400 MHz, CDCl3) δ 7.83 (d, J = 8.0 Hz, 1H), 7.47 (d, J = 8.4 Hz, 2H), 7.32–7.28 (m, 2H), 7.24 (s, 1H), 7.16 (s, 1H), 7.06 (d, J = 8.4 Hz, 2H), 6.95 (t, J = 7.8 Hz, 1H), 6.72 (t, J = 3.0 Hz, 1H), 6.39 (d, J = 8.0 Hz, 1H), 3.93 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 160.9, 144.5, 143.1, 131.6, 130.6, 124.1, 123.6, 123.5, 121.4, 120.9, 119.3, 117.7, 114.2, 113.1, 113.0, 111.7, 106.2, 55.5; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C20H16N3O 314.1288, found 314.1287.
9,10-Difluoro-6-(4-methoxyphenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8v).
image file: d0ra01140a-u59.tif
White solid, mp: 206.3–208.2 °C (35.3 mg, 54%); 1H NMR (400 MHz, CDCl3) δ 7.56–7.52 (m, 1H), 7.46 (d, J = 8.8 Hz, 2H), 7.27 (d, J = 3.6 Hz, 1H), 7.25 (s, 1H), 7.18 (s, 1H), 7.09 (d, J = 8.4 Hz, 2H), 6.72 (t, J = 3.0 Hz, 1H), 6.18–6.13 (m, 1H), 3.95 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 161.1, 149.5 (d, JC–F = 14.6 Hz), 147.2 (dd, JC–F = 39.2, 15.0 Hz), 145.1 (d, JC–F = 14.8 Hz), 144.4, 140.0 (d, JC–F = 10.5 Hz), 131.6, 125.5 (d, JC–F = 11.3 Hz), 123.5, 122.5, 120.5, 118.0, 114.5, 112.6 (d, JC–F = 120.5), 106.4, 106.1 (d, JC–F = 19.5 Hz), 101.2 (d, JC–F = 24.7 Hz), 55.5; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C20H14F2N3O 350.1099, found 350.1095.
9,10-Dichloro-6-(4-methoxyphenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8w).
image file: d0ra01140a-u60.tif
White solid, mp: 226–227.5 °C (65.1 mg, 91%); 1H NMR (400 MHz, CDCl3) δ 7.84 (s, 1H), 7.47 (d, J = 8.4 Hz, 2H), 7.30 (d, J = 3.2 Hz, 1H), 7.26 (s, 1H), 7.20 (s, 1H), 7.10 (d, J = 8.4 Hz, 2H), 6.74 (t, J = 2.8 Hz, 1H), 6.44 (s, 1H), 3.95 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 161.2, 144.5, 143.9, 131.5, 129.6, 127.6, 124.9, 123.6, 122.5, 120.2, 119.9, 118.4, 114.5, 114.2, 113.5, 112.3, 107.2, 55.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C20H14Cl2N3O 382.0508, found 382.0504.
9,10-Dibromo-6-(4-methoxyphenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8x).
image file: d0ra01140a-u61.tif
White solid, mp: 217.0–217.2 °C (44.8 mg, 51%); 1H NMR (400 MHz, CDCl3) δ 8.03 (s, 1H), 7.46 (d, J = 7.6 Hz, 2H), 7.31 (d, J = 3.6 Hz, 1H), 7.27 (s, 1H), 7.20 (s, 1H), 7.11 (d, J = 4.4 Hz, 2H), 6.75 (s, 1H), 6.61 (s, 1H), 3.95 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 161.3, 144.8, 144.4, 131.5, 130.5, 123.6, 123.2, 122.5, 120.2, 119.0, 118.4, 117.4, 116.2, 114.5, 113.5, 112.3, 107.3, 55.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C20H14Br2N3O 469.9498, found 469.9500.
6-(4-Methoxyphenyl)-9,10-dimethylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8y).
image file: d0ra01140a-u62.tif
Pale yellow solid, mp: 227.1–228.1 °C (40.7 mg, 63%); 1H NMR (400 MHz, CDCl3) δ 7.59 (s, 1H), 7.48 (d, J = 8.4 Hz, 2H), 7.28 (d, J = 3.6 Hz, 1H), 7.22 (s, 1H), 7.14 (s, 1H), 7.08 (d, J = 8.4 Hz, 2H), 6.71 (s, 1H), 6.18 (s, 1H), 3.95 (s, 3H), 2.34 (s, 3H), 2.13 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 160.8, 143.1, 142.5, 132.6, 131.6, 130.3, 129.0, 124.2, 123.8, 121.2, 119.4, 117.3, 114.1, 113.3, 112.9, 111.3, 105.6, 55.5, 20.7, 20.3; HRMS (ESI-QTOF) m/z [M + H]+calcd for C22H20N3O 342.1601, found 342.1606.
6-(4-Methoxyphenyl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8z).
image file: d0ra01140a-u63.tif
Brown solid, mp: 230.2–231.2 °C (55.3 mg, 81%); 1H NMR (400 MHz, CDCl3) δ 8.24 (s, 1H), 7.95 (d, J = 8.4 Hz, 1H), 7.55 (t, J = 8.2 Hz, 3H), 7.42 (d, J = 2.8 Hz, 1H), 7.38 (t, J = 8.4 Hz, 1H), 7.31 (d, J = 7.2 Hz, 1H), 7.28 (s, 1H), 7.16 (s, 1H), 7.12 (d, J = 8.0 Hz, 2H), 6.80 (s, 1H), 6.75 (s, 1H), 3.98 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 161.0, 146.1, 144.3, 131.7, 131.3, 130.8, 129.2, 128.0, 127.8, 124.6, 124.1, 123.8, 123.4, 120.5, 118.6, 115.4, 114.3, 113.3, 111.0, 109.8, 107.9, 55.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C24H18N3O 364.1444, found 364.1448.
6-(2,5-Dimethoxyphenyl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8aa).
image file: d0ra01140a-u64.tif
White solid, mp: 187.3–188.2 °C (50.6 mg, 78%); 1H NMR (400 MHz, CDCl3) δ 7.83 (d, J = 8.0 Hz, 1H), 7.34–7.28 (m, 2H), 7.26 (s, 1H), 7.23 (s, 1H), 7.16–7.15 (m, 1H), 7.04–6.94 (m, 3H), 6.74 (t, J = 3.2 Hz, 1H), 6.44 (d, J = 8.0 Hz, 1H), 3.83 (s, 3H), 3.58 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 153.6, 153.0, 144.3, 142.9, 130.9, 123.5, 121.6, 121.4, 121.1, 120.9, 119.2, 117.7, 117.6, 116.6, 113.0, 112.1, 111.9, 111.86, 106.1, 55.9, 55.88; HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C21H17N3NaO2 366.1213, found 366.1211.
6-(2,5-Dimethoxyphenyl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ab).
image file: d0ra01140a-u65.tif
Pale brown solid, mp: 186.5–187.2 °C (60.0 mg, 81%); 1H NMR (400 MHz, CDCl3) δ 8.25 (s, 1H), 7.97 (d, J = 8.4 Hz, 1H), 7.56 (d, J = 8.0 Hz, 1H), 7.44 (d, J = 3.6 Hz, 1H), 7.38 (t, J = 7.4 Hz, 1H), 7.31–7.28 (m, 2H), 7.23 (s, 1H), 7.21 (d, J = 2.8 Hz, 1H), 7.10 (d, J = 2.8 Hz, 1H), 7.05 (d, J = 9.2 Hz, 1H), 6.83 (s, 1H), 6.77 (t, J = 2.6 Hz, 1H), 3.86 (s, 3H), 3.54 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 153.7, 153.1, 145.9, 144.2, 131.6, 130.9, 129.5, 127.9, 127.8, 124.0, 123.6, 121.9, 120.8, 120.6, 118.6, 117.7, 116.8, 115.2, 113.2, 111.9, 111.2, 108.7, 107.8, 56.0, 55.9; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C25H20N3O2 394.1550, found 394.1552.
6-([1,1′-Biphenyl]-4-yl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ac).
image file: d0ra01140a-u66.tif
Pale yellow solid, mp: 177.0–177.7 °C (57.6 mg, 85%); 1H NMR (400 MHz, CDCl3) δ 7.86 (d, J = 8.4 Hz, 1H), 7.82 (d, J = 7.6 Hz, 2H), 7.75 (d, J = 8.0 Hz, 2H), 7.66 (d, J = 7.6 Hz, 2H), 7.53 (t, J = 7.6 Hz, 2H), 7.45 (d, J = 7.6 Hz, 1H), 7.36 (d, J = 4.0 Hz, 1H), 7.33–7.29 (m, 3H), 6.97 (t, J = 7.8 Hz, 1H), 6.76 (t, J = 2.8 Hz, 1H), 6.53 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.6, 143.1, 142.9, 139.9, 130.6, 130.5, 130.2, 129.0, 128.0, 127.5, 127.1, 127.0, 124.1, 123.7, 121.5, 121.0, 119.4, 117.8, 113.2, 113.1, 111.8, 106.4; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C25H18N3 360.1495, found 360.1499.
6-([1,1′-Biphenyl]-4-yl)-9,10-dichlorobenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ad).
image file: d0ra01140a-u67.tif
Pale yellow solid, mp: 253.2–254.6 °C (46.4 mg, 58%); 1H NMR (400 MHz, CDCl3) δ 7.87 (s, 1H), 7.83 (d, J = 8.0 Hz, 2H), 7.73 (d, J = 7.2 Hz, 2H), 7.63 (d, J = 8.0 Hz, 2H), 7.53 (t, J = 7.6 Hz, 2H), 7.46 (d, J = 7.2 Hz, 1H), 7.34 (d, J = 3.2 Hz, 1H), 7.28 (d, J = 8.4 Hz, 2H), 6.77 (s, 1H), 6.53 (s, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.6, 144.0, 143.5, 139.8, 130.5, 129.5, 129.2, 129.0, 128.2, 127.8, 127.2, 125.0, 123.6, 120.3, 120.1, 118.5, 114.3, 113.6, 112.4, 107.4; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C25H16Cl2N3 428.0716, found 428.0719.
6-([1,1′-biphenyl]-4-yl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ae).
image file: d0ra01140a-u68.tif
Brown solid, mp: 246.6–245.2 °C (48.3 mg, 63%); 1H NMR (400 MHz, CDCl3) δ 8.27 (s, 1H), 7.97 (d, J = 8.4 Hz, 1H), 7.86 (d, J = 7.6 Hz, 2H), 7.78 (d, J = 7.2 Hz, 2H), 7.72 (d, J = 8.0 Hz, 2H), 7.56 (t, J = 7.8 Hz, 2H), 7.52–7.45 (m, 3H), 7.38 (t, J = 7.4 Hz, 1H), 7.32 (s, 1H), 7.29 (d, J = 7.2 Hz, 1H), 7.25 (s, 1H), 6.88 (s, 1H), 6.79 (t, J = 3.2 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 146.1, 144.4, 143.0, 140.0, 131.2, 130.9, 130.6, 130.1, 129.2, 129.1, 128.1, 128.0, 127.8, 127.5, 127.2, 124.6, 124.2, 123.9, 120.6, 118.8, 115.5, 113.4, 111.2, 109.8, 108.0; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C29H20N3 410.1652, found 410.1651.
6-(Naphthalen-2-yl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8af).
image file: d0ra01140a-u69.tif
Pale yellow solid, mp: 165.9–166.3 °C (47.8 mg, 75%); 1H NMR (400 MHz, CDCl3) δ 8.13 (s, 1H), 8.06–8.00 (m, 2H) 7.94 (d, J = 9.2 Hz, 2H), 7.70–7.61 (m, 3H), 7.53 (s, 1H), 7.39 (s, 1H), 7.37 (s, 1H), 7.32 (t, J = 7.8 Hz, 1H), 6.91 (t, J = 7.8 Hz, 1H), 6.82 (s, 1H), 6.39 (d, J = 7.2 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 138.7, 133.8, 133.0, 129.9, 129.6, 128.8, 128.4, 128.17, 128.15, 128.0, 127.7, 127.3, 127.1, 127.08, 124.6, 124.59, 124.2, 122.3, 118.7, 118.5, 114.1, 113.4, 112.9; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H16N3 334.1339, found 334.1332.
9,10-Dichloro-6-(naphthalen-2-yl)benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ag).
image file: d0ra01140a-u70.tif
White solid, mp: 273.3–273.8 °C (42.7 mg, 57%); 1H NMR (400 MHz, CDCl3) δ 8.10 (s, 1H), 8.06 (d, J = 8.4 Hz, 1H), 8.02 (d, J = 7.6 Hz, 1H), 7.96 (d, J = 7.2 Hz, 1H), 7.89 (d, J = 1.6 Hz, 1H), 7.66 (t, J = 5.8 Hz, 2H), 7.59 (d, J = 8.4 Hz, 1H), 7.37 (s, 1H), 7.32 (s, 2H), 6.78 (d, J = 2.8 Hz, 1H), 6.50 (d, J = 1.2 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.6, 144.0, 133.8, 133.0, 129.6, 129.4, 128.9, 128.8, 128.3, 128.1, 127.8, 127.76, 127.7, 127.4, 126.7, 125.0, 124.0, 120.1, 118.5, 114.3, 113.7, 112.7, 107.4; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H14Cl2N3 402.0599, found 402.0593.
6-(Naphthalen-2-yl)naphtho[2′,3′:4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ah).
image file: d0ra01140a-u71.tif
Yellow solid, mp: 151–152 °C (57.0 mg, 79%); 1H NMR (400 MHz, DMSO-d6) δ 8.39 (s, 1H), 8.25 (s, 1H), 8.21 (d, J = 8.4 Hz, 1H), 8.17 (d, J = 7.6 Hz, 1H), 8.10 (d, J = 8.0 Hz, 1H), 7.99 (d, J = 8.4 Hz, 1H), 7.96 (s, 1H), 7.85 (d, J = 8.4 Hz, 1H) 7.76–7.68 (m, 3H), 7.36 (t, J = 7.2 Hz, 1H), 7.32 (d, J = 3.2 Hz, 1H), 7.28–7.21 (m, 2H), 6.84–6.82 (m, 1H), 6.70 (s, 1H); 13C{1H} NMR (100 MHz, DMSO-d6) δ 146.1, 144.6, 135.6, 133.8, 133.1, 130.7, 129.7, 129.0, 128.8, 128.79, 128.7, 128.4, 128.0, 127.9, 127.6, 124.6, 124.4, 124.3, 120.6, 120.1, 115.2, 113.6, 112.5, 109.6, 109.0, 108.9, 107.9; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C27H18N3 384.1495, found 384.1494.
6-Methylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (8ai).
image file: d0ra01140a-u72.tif
Brown solid, mp: 153.4–153.6 °C (33.6 mg, 80%); 1H NMR (400 MHz, CDCl3) δ 7.86 (d, J = 8.0 Hz, 1H), 7.81 (d, J = 8.4 Hz, 1H), 7.36 (t, J = 7.6 Hz, 1H), 7.25–7.20 (m, 2H), 7.13 (t, J = 1.2 Hz, 1H), 6.99 (s, 1H), 6.65 (t, J = 3.0 Hz, 1H), 2.75 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) δ 139.3, 137.9, 125.9, 118.5, 116.6, 115.4, 115.3, 114.3, 111.8, 107.3, 107.29, 104.5, 100.7, 12.5; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C14H12N3 222.1026, found 222.1025.

Compounds 9, 11, and 13 were synthesized by following the same procedure for the synthesis of 8 except that a higher reaction temperature was needed in case of 9.

Benzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (9).
image file: d0ra01140a-u73.tif
Pale yellow solid, mp: 148–148.9 °C (10.5 mg, 21%); 1H NMR (400 MHz, CDCl3) δ 7.87 (d, J = 8.0 Hz, 1H), 7.59 (d, J = 7.6 Hz, 1H), 7.42–7.30 (m, 6H), 6.71 (d, J = 1.6 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.1, 142.5, 141.9, 130.0, 124.1, 122.0, 119.5, 118.3, 113.0, 112.4, 109.0, 108.2, 106.6; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C13H10N3 208.0869, found 208.0868.
7-Phenylbenzo[4′,5′]imidazo[2′,1′:3,4]pyrazino[1,2-a]indole (11).
image file: d0ra01140a-u74.tif
Pale yellow solid, mp: 189.7–190.2 °C (62.7 mg, 100%); 1H NMR (400 MHz, CDCl3) δ 7.91 (t, J = 7.2 Hz, 2H), 7.71 (d, J = 5.6 Hz, 1H), 7.66–7.59 (m, 6H), 7.52 (d, J = 2.8 Hz, 1H), 7.42–7.31 (m, 3H), 7.03–6.99 (m, 1H), 6.43 (d, J = 8.4 Hz, 1H); 13C{1H} NMR (100 MHz, CDCl3) δ 144.4, 142.7, 132.4, 131.6, 130.8, 130.4, 130.1, 128.9, 128.8, 125.2, 123.8, 123.2, 122.7, 122.4, 122.3, 122.0, 119.8, 113.2, 109.8, 109.5, 99.1; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C23H16N3 334.1339, found 334.1334.
5-Methyl-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (13a).
image file: d0ra01140a-u75.tif
Pale yellow solid, mp: 188.0–188.6 °C (41.1 mg, 74%); 1H NMR (400 MHz, CDCl3) δ 7.81 (d, J = 8.0 Hz, 1H), 7.68–7.63 (m, 3H), 7.51 (d, J = 6.4 Hz, 2H), 7.43 (s, 1H), 7.34 (s, 1H), 7.24 (s, 1H), 6.88–6.82 (m, 2H), 5.87 (d, J = 8.4 Hz, 1H), 2.32 (s, 3H); 13C{1H} NMR (100 MHz, CDCl3) 144.2, 142.5, 132.0, 131.2, 130.6, 130.1, 129.4, 128.9, 126.7, 123.5, 121.3, 121.1, 120.7, 119.0, 117.8, 115.8, 113.1, 112.7, 106.8, 14.3; HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C20H15N3Na 320.1158, found 320.1157.
5-Benzyl-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine (13b).
image file: d0ra01140a-u76.tif
Yellow solid, mp: 183.1–183.5 °C (40.6 mg, 81%); 1H NMR (400 MHz, CDCl3) δ 7.86 (d, J = 8.0 Hz, 1H), 7.66 (d, J = 6.8 Hz, 1H), 7.63–7.57 (m, 4H), 7.42 (d, J = 2.8 Hz, 1H), 7.34–7.29 (m, 4H), 7.22 (d, J = 7.2 Hz, 2H), 7.13 (s, 1H), 6.91 (t, J = 7.8 Hz, 1H), 6.68 (s, 1H), 5.88 (d, J = 7.6 Hz, 1H), 4.12 (s, 2H); 13C{1H} NMR (100 MHz, CDCl3) 144.4, 142.6, 136.4, 131.6, 130.9, 130.7, 130.3, 129.5, 129.0, 127.4, 127.0, 123.6, 122.7, 121.2, 119.3, 119.2, 117.2, 113.0, 112.7, 106.6, 34.0; HRMS (ESI-QTOF) m/z [M + Na]+ calcd for C26H19N3Na 396.1471, found 396.1477.

Synthesis of 14

After a mixture of 8a (0.0388 mmol) and iodomethane (0.5 mL) in CH2Cl2 (0.5 mL) was stirred at rt for 3 h, the reaction mixture was concentrated under reduced pressure to give 14 (23.8 mg, 100%).
12-Methyl-6-phenylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazin-12-ium iodide (14).
image file: d0ra01140a-u77.tif
Yellow solid, mp: 297–298 °C (23.8 mg, 100%); 1H NMR (400 MHz, DMSO-d6) δ 8.43 (s, 1H), 8.14–8.13 (m, 2H), 7.95 (d, J = 4.0 Hz, 1H), 7.70–7.61 (m, 6H), 7.29 (t, J = 8.0 Hz, 1H), 7.20–7.18 (m, 1H), 6.24 (d, J = 8.8 Hz, 1H), 4.37 (s, 3H); 13C{1H} NMR (100 MHz, DMSO-d6) δ 139.0, 133.1, 131.6, 131.0, 129.85, 129.82, 127.7, 127.2, 125.4, 123.5, 123.3, 116.8, 116.4, 114.7, 114.2, 113.2, 112.6, 33.1; HRMS (ESI-QTOF) m/z [M + H]+ calcd for C20H16N3 298.1339, found 298.1340.

Conflicts of interest

There are no conflicts to declare.

Acknowledgements

This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIP) (NRF-2017R1A2A2A05069364 and NRF-2018R1A6A1A03023718) to I. K. and the National Research Foundation of Korea (NRF) grants funded by the Korean government (MSIP) (NRF-2018R1A2B2005535 and 2018R1A4A1021703) to J. L. We acknowledge Ounyoung Lim for contribution in Operetta High-Content imaging data.

References

  1. M. Beija, C. A. Afonso and J. M. Martinho, Chem. Soc. Rev., 2009, 38, 2410–2433 RSC.
  2. Z. Guo, S. Park, J. Yoon and I. Shin, Chem. Soc. Rev., 2014, 43, 16–29 RSC.
  3. L. Yuan, W. Lin, K. Zheng, L. He and W. Huang, Chem. Soc. Rev., 2013, 42, 622–661 RSC.
  4. T. Kowada, H. Maeda and K. Kikuchi, Chem. Soc. Rev., 2015, 44, 4953–4972 RSC.
  5. W. Z. Yuan, P. Lu, S. Chen, J. W. Y. Lam, Z. Wang, Y. Liu, H. S. Kwok, Y. Ma and B. Z. Tang, Adv. Mater., 2010, 22, 2159–2163 CrossRef CAS PubMed.
  6. M. Huang, R. Yu, K. Xu, S. Ye, S. Kuang, X. Zhu and Y. Wan, Chem. Sci., 2016, 7, 4485–4491 RSC.
  7. Y. Hong, J. W. Y. Lam and B. Z. Tang, Chem. Soc. Rev., 2011, 40, 5361–5388 RSC.
  8. J. Mei, N. L. Leung, R. T. Kwok, J. W. Lam and B. Z. Tang, Chem. Rev., 2015, 115, 11718–11940 CrossRef CAS PubMed.
  9. C. Maeda, K. Nagahata and T. Ema, Org. Biomol. Chem., 2017, 15, 7783–7788 RSC.
  10. Y. Liu, Y. Zhang, X. Wu, Q. Lan, C. Chen, S. Liu, Z. Chi, L. Jiang, X. Chen and J. Xu, J. Mater. Chem. C, 2014, 2, 1068–1075 RSC.
  11. J. Yang, J. Huang, Q. Li and Z. Li, J. Mater. Chem. C, 2016, 4, 2663–2684 RSC.
  12. D. Lo, C.-H. Chang, G. Krucaite, D. Volyniuk, J. V. Grazulevicius and S. Grigalevicius, J. Mater. Chem. C, 2017, 5, 6054–6060 RSC.
  13. J. Huang, N. Sun, P. Chen, R. Tang, Q. Li, D. Ma and Z. Li, Chem. Commun., 2014, 50, 2136–2138 RSC.
  14. S. Kwon, D. I. Kwon, Y. Jung, J. H. Kim, Y. Lee, B. Lim, I. Kim and J. Lee, Sens. Actuators, B, 2017, 252, 340–352 CrossRef CAS.
  15. D. K. Singh, K. Jang, J. Kim, J. Lee and I. Kim, ACS Comb. Sci., 2019, 21, 408–416 CrossRef CAS PubMed.
  16. D. Aakash, B. Richa Kaur, K. Ramanjot, K. Sanjiv, J. Upendra Kumar, S. Harinder, B. Sandeep, K. Dinesh and D. Pran Kishore, Curr. Top. Med. Chem., 2017, 17, 238–250 Search PubMed.
  17. V. Sharma and V. Kumar, Med. Chem. Res., 2014, 23, 3593–3606 CrossRef CAS.
  18. S. Cherukupalli, R. Karpoormath, B. Chandrasekaran, G. A. Hampannavar, N. Thapliyal and V. N. Palakollu, Eur. J. Med. Chem., 2017, 126, 298–352 CrossRef CAS PubMed.
  19. S. El Kazzouli, J. Koubachi, N. El Brahmi and G. Guillaumet, RSC Adv., 2015, 5, 15292–15327 RSC.
  20. K. Pericherla, P. Kaswan, K. Pandey and A. Kumar, Synthesis, 2015, 47, 887–912 CrossRef CAS.
  21. C. R. G. A. C. de Souza, M. F. Z. J. Amaral, A. A. Dos Santos and G. C. Clososki, Targets Heterocycl. Syst., 2016, 20, 365–392 CAS.
  22. M. A. Salem, M. H. Helal, M. A. Gouda, H. H. Abd El-Gawad, M. A. M. Shehab and A. El-Khalafawy, Synth. Commun., 2019, 49, 1750–1776 CrossRef CAS.
  23. I. Kim, S. H. Kim, Korea Patent, KR20160006050 A, 2016-01-18.
  24. S. Park, Y. Jung and I. Kim, Tetrahedron, 2014, 70, 7534–7550 CrossRef CAS.
  25. D. K. Singh and I. Kim, ARKIVOC, 2019,(part iii), 8–21 Search PubMed.
  26. J. Kim, M. Park, J. Choi, D. K. Singh, H. J. Kwon, S. H. Kim and I. Kim, Bioorg. Med. Chem. Lett., 2019, 29, 1350–1356 CrossRef CAS PubMed.
  27. A. Dagar, G. H. Bae, J. H. Lee and I. Kim, J. Org. Chem., 2019, 84, 6916–6927 CrossRef CAS PubMed.
  28. S. Ramesh, S. Kr Ghosh and R. Nagarajan, Org. Biomol. Chem., 2013, 11, 7712–7720 RSC.
  29. L. F. Tietze, H. P. Bell and S. Chandrasekhar, Angew. Chem., Int. Ed. Engl., 2003, 42, 3996–4028 CrossRef CAS PubMed.
  30. V. V. Kouznetsov and A. Gomez-Barrio, Eur. J. Med. Chem., 2009, 44, 3091–3113 CrossRef CAS PubMed.
  31. K. Nepali, S. Sharma, M. Sharma, P. M. Bedi and K. L. Dhar, Eur. J. Med. Chem., 2014, 77, 422–487 CrossRef CAS PubMed.
  32. Shaveta, S. Mishra and P. Singh, Eur. J. Med. Chem., 2016, 124, 500–536 CrossRef CAS PubMed.
  33. M. Kim, Y. Jung and I. Kim, J. Org. Chem., 2013, 78, 10395–10404 CrossRef CAS PubMed.
  34. B. Trofimov, A. Ivanov, E. Skital'tseva, A. Vasil'tsov, I. Ushakov, K. Petrushenko and A. b. Mikhaleva, Synthesis, 2009, 3603–3610 CrossRef CAS.
  35. S. Banerjee, A. K. Both and M. Sarkar, ACS Omega, 2018, 3, 15709–15724 CrossRef CAS PubMed.
  36. S. Choi, J. Bouffard and Y. Kim, Chem. Sci., 2014, 5, 751–755 RSC.
  37. X. Cao, L. Meng, Z. Li, Y. Mao, H. Lan, L. Chen, Y. Fan and T. Yi, Langmuir, 2014, 30, 11753–11760 CrossRef CAS PubMed.
  38. Y. Shen, H. Liu, J. Cao, S. Zhang, W. Li and B. Yang, Phys. Chem. Chem. Phys., 2019, 21, 14511–14515 RSC.

Footnotes

Electronic supplementary information (ESI) available: 1H and 13C NMR spectra of synthesized compounds and CIF files for 8c. CCDC 1919367. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d0ra01140a
These authors contributed equally.

This journal is © The Royal Society of Chemistry 2020