Open Access Article
Ondřej Baszczyňski‡
b,
Joanna M. Watt
ab,
Monika D. Rozewitzc,
Ralf Fliegertc,
Andreas H. Gusec and
Barry V. L. Potter
*ab
aMedicinal Chemistry and Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford, OX1 3QT, UK
bWolfson Laboratory of Medicinal Chemistry, Department of Pharmacy and Pharmacology, University of Bath, Bath, BA2 7AY, UK. E-mail: barry.potter@pharm.ox.ac.uk
cThe Calcium Signalling Group, Department of Biochemistry and Molecular Cell Biology, University Medical Center Hamburg-Eppendorf, Martinistrasse 52, 20246 Hamburg, Germany
First published on 9th January 2020
Adenosine 5′-diphosphate ribose (ADPR) is an intracellular signalling molecule generated from nicotinamide adenine dinucleotide (NAD+). Synthetic ADPR analogues can shed light on the mechanism of activation of ADPR targets and their downstream effects. Such chemical biology studies, however, are often challenging due to the negatively charged pyrophosphate that is also sensitive to cellular pyrophosphatases. Prior work on an initial ADPR target, the transient receptor potential cation channel TRPM2, showed complete pyrophosphate group replacement to be a step too far in maintaining biological activity. Thus, we designed ADPR analogues with just one of the negatively charged phosphate groups removed, by employing a phosphonoacetate linker. Synthesis of two novel phosphonoacetate ADPR analogues is described via tandem N,N′-dicyclohexylcarbodiimide coupling to phosphonoacetic acid. Neither analogue, however, showed significant agonist or antagonist activity towards TRPM2, underlining the importance of a complete pyrophosphate motif in activation of this particular receptor.
1 or via the sequential action of poly-ADPR polymerase (PARP) and poly-ADPR glycohydrolase (PARG).2 PARP inhibitors are currently highly topical as drugs in oncology.3 ADPR's cyclic incarnation as cyclic ADP-ribose (cADPR) is a second messenger in cellular calcium signalling.4,5 cADPR is also hydrolysed to ADPR as a deactivation mechanism. ADPR targets include widespread macro domains6 and the non-selective cation channel, transient receptor potential cation channel, subfamily M, member 2 (TRPM2).7,8 They are associated with a diverse range of physiological processes that are still not yet fully understood. However, chemical biological studies of ADPR-mediated processes in whole cells are often hampered by ADPR's negative charges and lack of membrane permeability. Studies of these processes often require technically demanding and time-consuming patch clamp or microinjection experiments on single cells to deliver charged species physically through the cell membrane. Furthermore, ADPR is subject to hydrolysis of the pyrophosphate by enzymes (intracellular enzymes, ectoenzymes in the plasma membrane and enzymes present in biological fluids), including hydrolases of the NUDIX family. This means that ADPR itself is unlikely to be stable for any length of time in a biological setting, complicating the direct study of its effects. Thus, synthetic ADPR analogues that are both membrane permeant and stable in the biological environment would be valuable tools to unravel the downstream mechanisms and function of this ligand. Stable ADPR analogues may also be useful when clarification of the precise second messenger that is acting under physiological conditions has proved challenging.9,10
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| Fig. 1 (a) ADPR; (b–e) ADPR analogues modified in the pyrophosphate motif and (f) the targets 1 and 2 of the present work. | ||
Small changes to the structure of ADPR have demonstrated profound effects on activity and, as a result, synthetic analogues closely based on the ADPR structure have been very informative.11–13 Analogues with modifications in the adenosine11,13 and terminal ribose14–17 motifs have been prepared via coupling of a modified 5′-O-phosphoryl adenosine or ribose to its 5′-O-phosphoryl counterpart using morpholidate, diphenylphosphonate or imidazolide methods to activate one phosphate towards nucleophilic attack and thus generate the pyrophosphate. Notwithstanding their utility for studying ADPR processes using single cell techniques such as patch clamping, further studies even with many of these designed analogues are limited by the negative charge and potential biological instability of the pyrophosphate moiety. Such pyrophosphate-containing ADPR analogues are thus not suitable for use in whole cell studies or for in vivo applications. The cell permeable peptide tat-M2NX has been shown to inhibit TRPM2 and reduce ischemic injury in male mice,18 suggesting that membrane permeable analogues closely related to ADPR in structure would find similar utility.
The negative charge of ADPR may be reduced by masking the charged phosphate groups. Indeed, ADPR that was acetylated and bioreversibly masked with a lipophilic group on the adenosine phosphate has been reported.19 However, pyrophosphates masked in this way can be more unstable towards hydrolysis by nucleophiles than their negatively charged counterparts, and this does not address the issue of degradation due to cellular pyrophosphatases. The use of phosphate bioisosteres in medicinal chemistry is an alternative method to improve cellular stability and potentially also improve membrane permeability.20 Previous studies using pyrophosphate replacement in ADPR have provided some new insights into ADPR binding. The methylene bis-phosphonate analogue of ADPR (α-β methylene ADPR, AMPCPR, Fig. 1b) contains a non-hydrolysable P–C–P pyrophosphate substitution that is stable towards pyrophosphatases and has therefore generated a number of crystal structures of ADPR targets bound to AMPCPR.21 Tóth et al. showed that AMPCPR still supports TRPM2 channel gating, albeit as a lower affinity partial agonist.22 AMPCPR has been used to uncouple the TRPM2 channel gating mechanism from its enzymatic activity by virtue of its pyrophosphatase resistant methylene bis-phosphonate linker.22,23 Two further ADPR analogues with similarly modified pyrophosphates (one methylene bisphosphate and one difluoromethylene bisphosphate, see Fig. 1e) that were also protected on some or all of the ADPR hydroxyl groups selectively inhibited TRPM2.24 These hydrolysis resistant analogues demonstrate that modification of the pyrophosphate can impart valuable attributes to the ADPR analogue. However, such methylene bis-phosphonate analogues still carry two negative charges at physiological pH, and thus are not membrane permeable.
Our previous highly ambitious complete replacements of the pyrophosphate group in ADPR (Fig. 1c and d), that are unlikely to be charged at physiological pH, unfortunately did not show TRPM2 agonist or antagonist activity.11,13 We therefore pursued a more conservative approach in this study, designing two ADPR analogues 1 and 2 with only one phosphorus centre replaced (Fig. 1f). We chose the isosteric phosphonoacetate group as a pyrophosphate mimic between the adenosine and the terminal ribose of ADPR, as this analogue would only carry a single negative charge at physiological pH. A phosphonoacetate motif should also be resistant to the intrinsic cellular pyrophosphatase activity of some ADPR targets as the P–C bond is more chemically stable than the pyrophosphate P–O bond.25 Therefore, such analogues could potentially be used to probe ADPR-mediated activities in isolation from pyrophosphatase activity. The first phosphonoacetate analogues of the 5-O-pyrophosphate in diphosphoinositol polyphosphates (PP-InsPs) were recognised and phosphorylated by the kinase domain of diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), showing that such substitution of a pyrophosphate did not prevent recognition of the analogue by its target enzyme and allowing downstream effects unrelated to dephosphorylation to be studied.26
We therefore report here the synthesis of phosphonoacetate ADPR analogues 1 and 2, studies on the stability of both analogues and their initial biological evaluation at TRPM2.
:
2
:
1 v/v/v) containing 0.1% triethylamine. The desired product 6 was then eluted by switching to a second isocratic solvent system of isopropyl alcohol, water and aqueous ammonia (7
:
2
:
1 v/v/v) containing 0.1% triethylamine. First attempts to obtain compound 7 via DCC mediated coupling to 1′-O-methyl-2′, 3′-O-isopropylidene-β-D-ribofuranoside 12 were unsuccessful. However, after a short optimization, we found that at elevated temperature (50–70 °C) compound 6 forms a mixture of anhydrides, including most likely adenosine phosphonoacetate anhydride28 which only reacts with 12 at temperatures above 100 °C. Thus, the higher temperature of 120 °C (compared to the DCC mediated reaction of 4 and 11 that occurred at rt) plays a crucial role in the conversion of 6 to 7. Finally, with the optimized conditions, the DCC mediated coupling of 6 with 1′-O-methyl-2′, 3′-O-isopropylidene-β-D-ribofuranoside 12 generated the desired ADPR analogue 7 (best yield 57%). Deprotection of 7 led to target compound 1, which was obtained after HPLC purification in 0.1 M TEAB buffer with a gradient of acetonitrile as the triethylammonium salt (36%). Until deprotection of analogue 7, all reactions are stereospecific. The final ADPR analogue 1 is a mixture of α and β anomers at the terminal ribose (ratio α
:
β = 2
:
3, as detailed in the Experimental section).
Synthesis of adenosine-5′-phosphonoacetyl ribose (Fig. 1f, 2) started from diethylphosphonoacetic acid 4 (Scheme 2), that was coupled to 1′-O-methyl-2′,3′-O-isopropylidene-β-D-ribofuranoside 12 using DCC, to give compound 8 (best yield 74%). Trans-silylation and hydrolysis of 8, followed by silica gel chromatography gave phosphonic acid 9 (68%) contaminated with trace impurities. Compound 9 was directly coupled to 2′,3′-O-isopropylidene adenosine 11 via previously optimized DCC coupling at elevated temperature 120 °C to give compound 10 (56%). Deprotection of 10 led to the final compound 2, which was purified several times using HPLC in 0.1 M TEAB buffer with a gradient of acetonitrile as the triethylammonium salt (best yield 67%). Until deprotection of analogue 10, all reactions are stereospecific. The final ADPR analogue 2 is a mixture of α and β anomers at the terminal ribose (ratio α
:
β = 2
:
3, as detailed in the Experimental section).
We then measured the stability of phosphonoacetate 2 under various aqueous conditions (Fig. 2). According to these findings, analogue 2 was stable in pure MilliQ water (pH 7) as the triethylammonium salt when stored in the fridge. Importantly, this should be sufficient for biological assays using the pure phosphonoacetate 2 when used immediately from a frozen sample. Increased pH 8–9 (in 0.1 M TEAB buffer) resulted in slow decomposition of 2 either at room temperature or when stored in the fridge. We prepared the sodium salt of analogue 2 in an attempt to overcome the possibility of triethylammonium counter ions generating a basic solution and thus causing the decomposition of 2. The triethylammonium salt of 2 was stirred with Chelex (Na+ form) resin, which was removed by filtration to generate the sodium salt of 2. However, we were surprised to find that the corresponding sodium salt of 2 was even more unstable and degraded completely either at room temperature or when stored in the fridge (Fig. 2).
It was rather unexpected that ADPR analogue 1 is stable under various aqueous conditions whereas ADPR analogue 2 is not. This led us to consider which feature of 2 might be responsible for the observed degradation. Our observations suggest that 2 is sensitive to basic hydrolysis of the phosphonoacetate ester in TEAB buffer but that, under the same conditions, the phosphonoacetate ester of 1 is stable. This suggests that the terminal ribose 5′′-O-ester may influence the stability in a way that is not observed with the adenosine ribose 5′-O-ester. The triethylamine base present in TEAB buffer may catalyse hydrolysis of the ester bond between the phosphonoacetate ester and the 5′′-O-terminal ribose. Indeed, we have previously observed that modifications to the terminal ribose can generate ADPR analogues that are particularly prone to instability.14 Analogue 1 is not susceptible to hydrolysis because the more stable phosphonate monoester is adjacent to the terminal ribose. Phosphate monoesters are stable under basic conditions due to the negative charge on the phosphonate oxygen preventing nucleophilic attack. Presumably, the 5′-O-ester in analogue 1 is more sterically hindered, due to its proximity to the less flexible adenosine, and thus is less susceptible to hydrolysis under mildly basic conditions. In future, synthesis of the attractive corresponding phosphonamide ADPR analogues in which the ester is replaced by an amide linker, may be one method to ensure stable analogues are generated, as exemplified in a recent synthesis of an inositol polyphosphate pyrophosphate analogue.29
ADPR analogues 1 and 2 were tested for their agonist and antagonist activity on human TRPM2 (hTRPM2) using patch clamp experiments in HEK293 clones with stable expression of hTRPM2.13 Because the compound is infused into the cytoplasm of the cell via the patch-pipette, this method allows evaluation of the activity of the compounds independently of their membrane permeability. Following the results of our stability testing, phosphonoacetate 2 was stored as a lyophilized dry solid at −20 °C and made up in fresh MilliQ water immediately before testing to ensure that decomposition did not occur (vide supra). When applied at 100 μM or 1000 μM, neither 1 nor 2 had significant agonist effects at hTRPM2 (Fig. 3a). When applied with ADPR in the patch pipette (100 μM of ADPR with 300 μM or 900 μM 1 or 2), neither analogue showed significant antagonist effects on the ADPR-induced TRPM2 current (Fig. 3b). If activity was observed, we would have determined the membrane permeability of 1 and 2 by applying them extracellularly to whole cells, however this was not possible.
These results highlight the sensitivity of hTRPM2 channel activation to modifications of the ADPR molecular structure. It is possible that both phosphate motifs of the pyrophosphate bridge are required for binding and activation or inhibition of the channel, so that even a subtle change in this part of the molecule may lead to the complete loss of activity. The single atom substitution in the methylene bis-phosphonate analogue AMPCPR corresponded to a roughly 40 fold reduction in potency at hTRPM2 and AMPCPR is also only a partial hTRPM2 agonist.22 Alternatively the substitution of the pyrophosphate with the phosphonoacetate bioisostere may alter the presentation of other critical binding partners in the hTRPM2 binding pocket. Our molecular modelling suggests the phosphonoacetate linker theoretically seems to be a very good spatial mimic of the pyrophosphate unit, with sufficient flexibility to allow the adenosine and terminal ribose binding partners to position themselves in the same orientation as ADPR (ESI, Fig. S2†), but this may not reflect the reality once solvent effects and binding interactions are taken into account.
Cryo-EM structures of hTRPM2 have recently improved understanding of the zebrafish hTRPM2 apo and ADPR-bound states30 importantly for hTRPM2 also in the presence of bound ligands.31,32 However, only recently has their resolution become detailed enough to place ADPR in the binding pocket and has revealed, for the first time, ADPR binding sites in hTRPM2 that may act synergistically.32 The requirement for an ADPR mimic to bind to both sites, which possess very distinct shapes,30 may explain why very few synthetic ADPR analogues have activated the channel.11,15 Despite this recent advance, the structure activity relationship for hTRPM2 is not fully understood, and ADPR analogues remain essential for ligand-based drug design.
The crystal structure of the macro domain of thermophilic protein Af1521 bound to ADPR was solved in high resolution (1.5 Å, PDB 2BFQ).6 With the exception of the adenosine ribose, each ADPR structural feature interacts closely with the macro domain structure. The adenosine 5′-O-phosphate has two hydrogen bonds to the backbone N–H of valine 43 and glycine 143. The ribose 5′-O-phosphate has hydrogen bonds to the backbone N–H of serine 141 and tyrosine 145. Furthermore, the pyrophosphate is stabilized by the helix dipole. Thus, the demonstrated highly specific binding interactions of macro domains and apparent similar selectivity of hTRPM2 binding require very specific ADPR binding partners. Our initial results with hTRPM2 suggest that phosphonoacetate analogues 1 and 2 may not be able to fulfil all these demands, but 1 and 2 may potentially find applicability in other systems that bind ADPR.
:
4 v/v) and a gradient of MeOH (0–10%). This procedure afforded the title compound 5 as colourless glass (0.98 g, 62%). 1H NMR (400 MHz, d6-DMSO) δ 8.34 (s, H-8), 8.16 (s, H-2), 7.34 (s, 2H, NH2), 6.19 (d, 1H, J = 2.68 Hz, H-1′), 5.47 (dd, 1H, J = 6.0 Hz, J = 2.96 Hz, H-2′), 5.04 (dd, 1H, J = 6.4 Hz, J = 3.09 Hz, H-3′), 4.39–4.35 (m, 1H, H-4′), 4.31–4.27
4.23–4.18
4.04–3.95 (m, 4H, CH2CH3), 3.11 (d, 2H, JH–P = 21.36 Hz, CH2P), 1.54 (s, 3H, C(CH3)2), 1.33 (s, 3H, C(CH3)2), 1.18 (m, 6H, J = 3.16 Hz, CH2CH3). 31P NMR (161 MHz, d6-DMSO) δ 19.64 (s). 13C NMR (100 MHz, d6-DMSO) δ 165.44 (COO), 156.14 (C-6), 152.75 (C-2), 148.81 (C-4), 139.83 (C-8), 119.08 (C-5), 113.49 (C(CH3)2), 89.00 (C-1′), 83.31 (C-4′), 83.08 (C-2′), 81.02 (C-3′), 64.56 (C-5′), 62.05 and 61.99 (CH2CH3), 33.22 (d, JC–P = 130.57 Hz, C–P), 26.99 and 25.19 (C(CH3)2), 16.06 and 16.01 (CH2CH3). HRMS (ES+) calcd for C19H29N5O8P 486.1748, found [M + H]+ 486.1789.
:
2
:
1 v/v/v + 0.1% Et3N) and the product was eluted using iPrOH–H2O–aq. ammonia (7
:
2
:
1 v/v/v + 0.1% Et3N). This procedure afforded the title compound 6 as a white foam, as the mono-triethylammonium salt (179 mg, 30%). 1H NMR (400 MHz, d6-DMSO) δ 8.59 (s, 1H, H-8), 8.16 (s, 1H, H-2), 7.33 (s, 2H, NH2), 6.13 (d, 1H, J = 3.16 Hz, H-1′), 5.54 (dd, 1H, J = 6.4 Hz, J = 3.2 Hz, H-2′), 5.10 (dd, 1H, J = 6.0 Hz, J = 3.0 Hz, H-3′), 4.39 (m, 1H, H-4′), 4.22
4.06
2.89 (q, 6H, J = 7.25, NCH2CH3), 2.53 (dq, 2H, JH–P = 22.4 Hz, Jgem = 8.0 Hz, CH2P), 1.53 (s, 3H, C(CH3)2), 1.18 (s, 3H, C(CH3)2), 1.11 (t, 6H, J = 7.26 Hz, NCH2CH3). 31P NMR (161 MHz, d6-DMSO) δ 8.14 (s). 13C NMR (100 MHz, d6-DMSO) δ 176.66 (COO) HMBC, 156.06 (C-6), 152.76 (C-2), 149.13 (C-4), 139.84 (C-8), 118.79 (C-5), 113.27 (C(CH3)2), 88.69 (C-1′), 83.40 (C-4′), 83.16 (C-2′), 81.01 (C-3′), 63.52 (C-5′), 45.05 (NCH2CH3), (d, 38.52 and 38.02, very low intensity, CH2P signal partially hidden by the DMSO signal, estimated from HSQC), 27.02 and 25.20 (C(CH3)2), 8.70 (NCH2CH3). HRMS (ES−) calcd for C15H19N5O8P 428.0977, found [M − H]− 428.0985.
4.15–4.11 (m, 1H, H-4′′), 4.06–4.02
3.66–3.57
3.53 (q, 0.7H, J = 6.32 Hz, NCH2CH3), 3.19 (s, 3H, CH3O), 2.60–2.47 (m, 2H, CH2P), 1.53 and 1.33 (2 × s, 2 × 3H, C(CH3)2-Adn), 1.36 and 1.23 (2 × s, 2 × 3H, C(CH3)2-Rib). 31P NMR (161 MHz, d6-DMSO) δ 7.60 (s). 13C NMR (100 MHz, d6-DMSO) δ 169.60 (COO) HMBC, 156.04 (C-6), 152.76 (C-2), 149.13 (C-4), 140.15 (C-8), 118.75 (C-5), 113.23 (Adn C(CH3)2), 111.22 (Rib C(CH3)2), 108.45 (C-1′′), 88.75 (C-1′), 85.18 (C-4′′), 84.42 (C-3′′), 83.52 (C-4′), 83.30 (C-2′), 81.46 (C-2′′), 81.04 (C-3′), 64.00 (C-5′′), 63.50 (C-5′), 54.15 (CH3O), 36.32 (d, J = 112.0 Hz, CH2P a and b, HMBC), 27.03 and 25.21 (C(CH3)2-Adn), 26.22 and 24.61 (C(CH3)2-Rib). HRMS (ES−) calcd for C24H33N5O12P 614.1869, found [M − H]− 614.1885. Analytical HPLC, Rt = 8.62 min.
:
5 → 35/65 v/v). The title compound 1 was afforded as colourless glass, as a mixture of α and β anomers in the ratio α
:
β = 2
:
3, (3.1 mg, 36%, ⅓ Et3N salt). DOSY 1H NMR (water suppression, 500 MHz, D2O) δ 8.32 (s, 1H, H-8), 8.18 (s, 1H, H-2), 6.03 (d, 1H, J = 4.5 Hz, H-1′), 5.16 (d, 0.4H, J = 4.0 Hz, H-1′′α), 5.10 (d, 0.6H, J = 2.5 Hz, H-1′′β), 4.77 (t, 1H, obscured by D2O peak, J = 2.5 Hz, H-2′), 4.45 (t, 1H, J = 5.0 Hz, H-3′), 4.41–4.32 (m, 3H, H-4′, 5′), 4.12 (t, 0.6H, J = 5.0 Hz, H-3′′β), 4.07–4.04 (m, 0.4H, H-4′′α), 4.01–3.75
3.12 (q, 2H, J = 7.0 Hz, NCH2CH3), 2.81 and 2.79 (2 × dd, 2H, JH–P = 15.5 and 16 Hz, Jgem = 5.0 and 4.5 Hz, CH2P α, β), 1.20 (t, 3H, J = 7.0 Hz, NCH2CH3). 31P NMR (203 MHz, D2O) δ 14.40 (s), 14.30 (s). 13C NMR (126 MHz, D2O) δ 169.70 (COO) HMBC, 155.53 (C-6), 152.73 (C-2), 149.02 (C-4), 139.99 (C-8), 118.87 (C-5), 101.05 (C-1′′β), 96.28 (C-1′′α), 87.58 (C-1′), 81.85 and 81.16 (C-4′, 4′′α and β), 75.06 (C-2′′β), 73.44 (C-2′), 70.65, 70.44, 70.00, 69.85 (C-2′′α, 3′′α/β, 3′), 65.31 (d, J = 4.5 Hz, C-5′′), 64.00 (d, J = 5.5 Hz, C-5′), 46.65 (NCH2CH3), 35.03 and 34.34 (d, JC–P = 121.4 Hz, CH2P), 35.27 and 34.29 (d, JC–P = 122.1 Hz, CH2P), 8.19 (NCH2CH3). HRMS (ES−) calcd for C17H23N5O12P 520.1086, found [M − H]− 520.1097. Analytical HPLC: Rt = 4.14 min.
:
0 → 0
:
1 v/v) to afford the title compound 8 as a colourless glass (112 mg, 60%). 1H NMR (400 MHz, CDCl3) δ 4.96 (s, 1H, H-1), 4.67 (d, 1H, J = 6.0 Hz, H-2), 4.59 (d, 1H, J = 6.0 Hz, H-3), 4.35 (t, 1H, J = 7.2 Hz, H-4), 4.21–4.13 (m, 6H, H-5, CH2CH3), 3.31 (s, 3H, OCH3), 2.98 (d, 2H, J = 21.6, CH2P), 1.46 (s, 3H, C(CH3)2), 1.34 (t, 6H, J = 7.2 Hz, CH2CH3), 1.30 (s, 3H, C(CH3)2). 31P NMR (161 MHz, CDCl3) δ 19.22. 13C NMR (100 MHz, CDCl3) δ 165.72 (COO), 112.90 (C-(CH3)2), 109.79 (C-1), 85.50 (C-3), 84.29 (C-4), 82.15 (C-2), 65.88 (C-5), 63.19 (d, JC–P = 6.06 Hz, CH2CH3), 55.34 (OCH3), 34.67 (d, JC–P = 133.79 Hz, CH2P), 26.73 (CH3), 25.29 (CH3), 16.70 (CH2CH3). HRMS (ES+) calcd for C15H28O9P 383.1465, found [M + H]+ 383.1474.
:
2
:
1 v/v/v + 0.1% Et3N) and the product was eluted using iPrOH–H2O–aq. ammonia (7
:
2
:
1 v/v/v + 0.1% Et3N) to afford phosphonic acid 9 (603 mg, 68%, mono-triethylammonium salt) which was used for the next reaction without any further purification. 1H NMR (400 MHz, d6-DMSO) δ 4.91 (s, 1H, H-1), 4.75 (d, 1H, J = 7.5 Hz, H-2), 4.57 (d, 1H, J = 7.5 Hz, H-3), 4.22 (t, 1H, J = 9.0 Hz, H-4), 3.98–3.86 (m, 2H, H-5), 3.22 (s, 3H, MeO), 2.78 (q, 2H, J = 9.0 Hz, CH2P), 1.37 (s, 3H, C(CH3)2), 1.25 (s, 3H, C(CH3)2). 31P NMR (161 MHz, d6-DMSO) δ 8.36 (s). 13C NMR (400 MHz, d6-DMSO) δ 168.51 (d, J = 6.5 Hz, COO), 111.44 (C(CH3)2), 108.73 (C-1), 84.44 (C-3), 83.37 (C-4), 81.23 (C-2), 64.03 (C-5), 54.23 (MeO), 44.82 (CH2P), 26.20 and 24.63 (2 × C(CH3)2). HRMS (ES−) calcd for C11H18O9P 325.0694, found [M − H]− 325.0702.
:
1 → 6
:
4 v/v + 0.1% Et3N) to afford the title compound 10 as a white solid (52 mg, 56%). 1H NMR (500 MHz, D2O) δ 8.41 (s, 1H, H-8), 8.24 (s, 1H, H-2), 6.27 (d, 1H, J = 3.0 Hz, H-1′), 5.43–5.41 (m, 1H, H-2′), 5.20 (dd, 1H, J = 5.0 Hz, J = 2.0 Hz, H-3′), 4.93 (s, 1H, H-1′′), 4.71–4.66 (m, 1H, H-4′), 4.58 (d, J = 6.0 Hz, H-2′′), 4.43 (d, 1H, J = 6.0 Hz, H-3′′), 4.18–4.12 (m, 3H, H-4′′, 5′), 4.00–32.96 (m, 1H, H-5′′a), 3.86–3.81 (m, 1H, H-5′′b), 3.23 (s, 3H, CH3O), 2.84 (dq, 2H, JH–P = 20.5 Hz, J = 13.5 Hz, Jgem = 5.0 Hz, CH2P), 1.68 (s, 3H, C(CH3)2-Adn), 1.40 (s, 3H, C(CH3)2-Adn), 1.46 (s, 3H, C(CH3)2-Rib), 1.27 (s, 3H, C(CH3)2-Rib). 31P NMR (161 MHz, D2O) δ 14.11 (s). 13C NMR (126 MHz, D2O) δ 169.17 (d, J = 6.8 Hz, COO), 155.56 (C-6), 152.79 (C-2), 148.78 (C-4), 139.86 (C-8), 118.55 (C-5), 114.76 (C(CH3)2-Adn), 112.96 (C(CH3)2-Rib), 108.69 (C-1′′), 90.16 (C-1′), 84.90 (d, J = 8.78 Hz, C-4′), 84.06 (C-3′′), 83.96 (C-2′), 83.40 (C-4′′), 81.46 (C-3′), 80.94 (C-2′′), 65.17 (C-5′′), 64.80 (d, J = 5.41 Hz, C-5′), 54.69 (CH3O), 34.89 and 33.93 (d, JC–P = 120.5 Hz, CH2P), 26.14 and 24.35 (2 × C(CH3)2-Adn), 25.06 and 23.41 (2 × C(CH3)2-Rib); HRMS (ES−) calcd for C24H33N5O12P 614.1869, found [M − H]− 614.1889.
:
5 → 35
:
65 v/v) to afford the title compound 2 as a colourless glass, as a mixture of α and β anomers α/β = 2/3 (7.6 mg, 60%, ⅓ Et3N salt). DOSY 1H NMR (water suppression, 500 MHz, D2O) δ 8.37 (s, 1H, H-8), 8.15 (s, 1H, H-2), 6.04 (d, 1H, J = 5.5 Hz, H-1′), 5.21–5.19 (m, 0.4H, H-1′′α), 5.11 (d, 0.6H, J = 1.5 Hz, H-1′′β), 4.67 (t, 1H, J = 5.0 Hz, H-2′), 4.44–4.40 (m, 1H, H-3′), 4.31–4.27 (m, 1H, H-4′), 4.24
4.71–3.96
3.90–3.88 (m, 0.6H, H-2′′β), 3.11 (q, 2H, J = 7.0 Hz, NCH2CH3), 2.87–2.79 (m, 2H, CH2P), 1.19 (t, 3H, J = 7.5, NCH2CH3). 31P NMR (203 MHz, D2O) δ 14.61 (s), 14.50 (s). 13C NMR (126 MHz, D2O) δ 169.72 (COO), 155.52 (C-6), 152.77 (C-2), 149.1 (C-4), 139.74 (C-8), 118.69 (C-5), 101.18 (C-1′′β), 96.34 (C-1′′α), 87.02 (C-1′), 83.76 (C-4′), 79.83 and 79.44 (C-3′′α/β, 4′′α/β), 74.93 (C-2′′β), 74.20 (C-2′), 70.50 and 70.28 and 70.10 (C-3′′α/β, 2′′α, 3′), 65.30
64.58 and 63.84 (C-5′′α/β), 46.63 (NCH2CH3), 35.14 and 34.18 (d, JC–P = 121.1 Hz, CH2P a and b), 8.18 (NCH2CH3). HRMS (ES−) calcd for C17H23N5O12P 520.1086, found [M − H]− 520.1086. Analytical HPLC: RT = 3.68 min.Footnotes |
| † Electronic supplementary information (ESI) available: 1H-NMR, 13C-NMR and 31P-NMR spectra for compounds 1, 2 and 5–10. See DOI: 10.1039/c9ra09284f |
| ‡ Present address: Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 2030/8, 128 43 Prague 2, Czech Republic. |
| This journal is © The Royal Society of Chemistry 2020 |