Charles
Lochenie
a,
Alberto
Insuasty
a,
Tommaso
Battisti
a,
Luca
Pesce
b,
Andrea
Gardin
d,
Claudio
Perego
b,
Mike
Dentinger
a,
Di
Wang
c,
Giovanni M.
Pavan
*bd,
Alessandro
Aliprandi
*a and
Luisa
De Cola
*ae
aLaboratoire de Chimie et des Biomatériaux Supramoléculaires, Institut de Science et d'Ingénierie Supramoléculaires (UMR 7006), Université de Strasbourg & CNRS, 8, allée Gaspard Monge, 67000 Strasbourg, France. E-mail: decola@unistra.fr; aliprandi@unistra.fr
bDepartment of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, CH-6928 Manno, Switzerland
cKarlsruhe Nano Micro Facility (KNMF), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldschaffen, Germany
dDepartment of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, 10129 Torino, Italy. E-mail: giovanni.pavan@polito.it
eInstitut für Nanotechnologie (INT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldschaffen, Germany
First published on 16th October 2020
We describe, for a single platinum complex bearing a dipeptide moiety, a solvent-driven interconversion from twisted to straight micrometric assembled structures with different chirality. The photophysical and morphological properties of the aggregates have been investigated as well as the role of the media and concentration. A real-time visualization of the solvent-driven interconversion processes has been achieved by confocal microscopy. Finally, atomistic and coarse-grained simulations, providing results consistent with the experimental observations, allow to obtain a molecular-level insight into the interesting solvent-responsive behavior of this system.
In natural systems self-assembly is a constant motif for life. Many biological molecules tend to assembly in functional structures and amongst them peptides have been heavily investigated due to the resulting stable structure that can also cause severe disease such as Alzheimer, Parkinson, or Creutzfeldt–Jakob disease.18–21 Even short peptides sequences can be used to trigger self-assembly, create chiral objects and small molecules allow an easier control of the desired morphologies.22–25 Not only the chemical design of the peptide is relevant but as has been shown different supramolecular structures can be obtained depending on the preparation protocol. For example Stupp, Meijer, and co-workers have described how an amphiphilic peptide can form either long filaments containing β-sheets or smaller aggregates containing peptide segments in random coil conformation.26 In addition, thermodynamic and kinetic studies have revealed the presence of competing pathways in the self-assembly, which can lead to a switch in chirality of the resulting aggregate27 such as an opposite helicity.28 An “artificial infection” that mimic the nucleation–elongation mechanisms, observed in misfolded proteins such as amyloid-β, has been reported by Takeuchi et al., who described two aggregation pathways of a porphyrin as model system.29
Following in real-time the folding or assembly of biomolecules is always challenging experimentally, while the use of fluorescent dyes can furnish some information on the static assembly. Much more interesting would be the employment of a “reporter template” that could participate or not in the assembly process but would be able to change the properties of the assembly.30 In this perspective, an assembler that can follow in real time the peptides assembly or disassembly through a change in the absorption or emission properties can offer an interesting experimental hang to study the assembly. Herein we demonstrate that luminescent Pt(II) complexes can be used to probe supramolecular self-assembly pathways of peptides and even to observe the switching behavior from nanoribbons to chiral twisted fibers as a function of the media, revealing a key effect of the solvent in triggering major structural transitions in the system. A molecular-level understanding of the behavior of such self-assembling systems which is typically difficult to reach has been obtain by molecular models.
Upon recrystallization from ACN, a blue emitting yellow material was obtained. Scanning Electron Microscopy (SEM) study has revealed that the complex Pt-PyAG aggregates as ribbon-like fibres, as shown in Fig. 2A, B and Fig. S6.†
Annular dark field (ADF) scanning transmission electron microscopy (STEM) images of the nanoribbons were recorded and show that the ribbons are composed of several layers, with an interlayer distance of ≈2.4 nm (Fig. S17†). The fibres could also be observed with confocal fluorescence microscopy in solution, as shown in Fig. S15.† The aggregates have a length ranging from 5 to 200 μm, and a width of 300–500 nm. The photophysical properties of the monomeric species in ACN in dilute solution (10−5 M) have been studied and the emission is not detectable at this concentration (see below for the study of the concentration dependent emission). The behaviour at higher concentration, where nanoribbons in (aerated) ACN are formed, is summarized in the absorption, excitation, and emission spectra, depicted in Fig. 3, and the photophysical parameters are reported in Table 1. The aggregates present the typical structured-emission pattern corresponding to a Ligand-Centered (3LC) transition with a triplet character with maxima at 460, 490, and 521 nm.16,17,33 The long excited-state lifetime (see Fig. S8†) of 2.33 μs confirms the triplet nature of the transition.6,14,17,38–40 The photoluminescence quantum yield (ΦPL) of the nanoribbons was measured to be 0.065. We must note that the emission quantum yield is affected by the absorption of the monomeric species, always present in solution which however does not display emission except in TCE where the luminescence is extremely weak (see Fig. S11†). Indeed, the emission quantum yield of the crystalline fibers was determined to be 0.22. The absence of characteristic signal in the CD spectra in the region around 220 nm (Fig. 4),41 indicate the absence of β-sheet domains. On the other hand, an interaction between the metal complexes, and most likely the coordinated ligands, is observed in the excited state (see excitation spectrum) that increases the emission quantum yield and elongate the excited state lifetime (3LC) as reported above.
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Fig. 3 Absorption, excitation, and emission spectra of Pt-PyAG in ACN at 10−4 M (top) and in TCE at 10−3 M (bottom). |
If the nanoribbons of Pt-PyAG are dissolved in 1,1,2,2-tetrachloroethane (TCE) at 65 °C at a concentration of 10−3 M, and cool down to room temperature, the complex aggregates as twisted fibres. SEM images of the aggregates are presented in Fig. 2C, D and Fig. S7.† Interestingly, the observed fibres consist of only left-handed helixes, suggesting that the chirality present at the molecular level is now transcribed into the mesoscale. ADF-STEM images of the twisted fibres were also recorded and are shown in Fig. S17,† however, no packing structure could be observed due to the high beam sensitivity of the fibres. The twisted fibres have a length ranging from 5 to 50 μm, a width of 75–100 nm, and a height of ≈25 nm, and therefore are much smaller than the ribbons. Indeed 1,1,2,2-tetrachloroethane (TCE) is known to favour H-bonds formations and consequently the formation of β-sheet domains.31,42 It is important to note that the dipeptide pyridine ligand in the same conditions do not form aggregates, demonstrating the need of the platinum complex to initiate the self-assembly process. The absorption, excitation, and emission spectra of the twisted fibres are presented in Fig. 3 and the photophysical parameters are reported in Table 1. They display a slightly red-shifted emission if compared to the nanoribbons peaking at 468, 498, and 522 nm and a more marked difference in terms of relative intensity. In contrast to the ACN nanoribbons that are characterized by a single mono exponential decay, the excited-state lifetime of twisted fibres obtained in TCE is biexponential with a 4.41 μs and a 0.75 μs components. These two excited state lifetimes are due to different excited states: the first one referred to the highest energy structured emission, is ligand centred in nature (3LC), similarly to the ACN nanoribbons, while the shortest component is due to the low lying 3MMLCT emissive state rising from Pt–Pt interactions as already observed for this class of compounds.17 Such assignment has been corroborated by recording the excited state lifetimes at different wavelength of the emission spectrum (Fig. S8†). The photoluminescence quantum yields of a suspension of the fibres in air-equilibrated TCE at room temperature at 10−3 M and of the filtered fibres were measured to be 0.06 and 0.34, respectively. The circular dichroism (CD) in solution of suspended nanoribbons in ACN (10−4 M) showed no CD signal, while the twisted fibres in TCE (10−3 M) showed a CD positive band with an onset at 450 nm (Fig. S9†). The sharpness of the peak and the absence of features below 400 nm is due to the saturation of the detector that occurs because of the strong absorption of the monomeric form whose electronic transitions involve the achiral tridentate ligand and the metal (1LC and 1MLCT) as already reported in a previous paper.32 The CD spectrum of the isolated twisted fibres film shows two features, one broad band from 225 to 370 nm, and one band centred at 425 nm, which corresponds to the transitions of the aggregated complexes. Such result suggests that the CD arise from the supramolecular structure and not from the ancillary ligand, which presents a different CD signal and does not absorb above 400 nm (Fig. 4). Powder X-ray diffraction on the drop-casted has further confirmed that ribbons and twisted fibres are structurally different (see Fig. S14†) even if it was not possible to determine the actual packing of the system.
In order to understand the mechanism of formation of the supramolecular structures we have performed temperature-dependent emission spectroscopy at different concentration (either ACN or TCE).43 Starting from a hot solution of the monomer Pt-PyAG, the cooling curve was recorded at a rate of 1 °C min−1 and emission spectrum measured every 5 °C, with an equilibration time of 20 min. The ribbons were measured at 4 different concentrations (5 × 10−4 M, 2.5 × 10−4 M, 10–4 M, and 7.5 × 10−5 M). In Fig. S12A,† the integrated emission intensity is plotted against the temperature, and it can be seen that upon cooling the emission intensity is constant until reaching a critical temperature at which the intensity grows exponentially suggesting a cooperative process. This was observed for all concentrations except at the lowest (7.5 × 10−5 M) where this phenomenon is either not happening, or could not be measured. For the other concentrations, the integrated emission intensity was normalized, and an exponential fit was applied to the data sets, with a rather good agreement (see Fig. S12B†). For the twisted fibres, it was noticed that upon aggregation, the relative intensities of the emission maxima are changing; in particular the band at 575 nm becomes more and more intense as the temperature is lowered (see normalized temperature-dependent spectra in Fig. S10D†). Such band can be ascribed to 3MMLCT transition of interacting Pt centres. If the emission intensity at 575 nm is plotted against the temperature, Fig. S12C,† a non-linear increase of the emission intensity is observed suggesting the absence of cooperativity.44 Unfortunately we could not confirm such hypothesis by temperature dependent UV-Vis spectroscopy due to the large scattering of the fibres (see Fig. S16†). To prove that it is possible to convert one structure into the other a suspension of the twisted fibres (10−3 M) in TCE was diluted stepwise with ACN. The conversion of the fibres was followed by measuring the photoluminescence quantum yield (ΦPL) of the system using an integrating sphere setup. After each addition of the solvent, the mixture was stirred until ΦPL was stable indicating that the system had equilibrated. In Fig. 5, the ΦPL is plotted against the solvent composition (indicated as percentage of ACN in TCE) as well as the variation in concentration. It is important to note that the starting emission quantum yield is lower than the solid state measurements (0.34) and is function of the aggregation degree that depends on the total concentration. Upon addition of the second solvent, dissolution of the fibres is observed and the value reach zero when 40% of ACN is added. The disassembly of the fibres can be only marginally correlated to the dilution effect (see Fig. S13†). Above 50% ACN the ΦPL starts to rise again, and the molecularly dissolved complexes begin to aggregate as ribbons. The abrupt increase of the emission further points toward a cooperative mechanism in the self-assembly of the ribbon. Those experiments allow us to state that, at equilibrium, the two aggregates cannot coexist because for a range of solvent composition (ACN/TCE) no aggregate formation is observed (molecularly dissolved state).
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Fig. 5 Emission quantum yield (λexc = 350 nm) vs. solvent composition (TCE/ACN) upon dilution (upper plot); snapshots at 0, 45, and 90 min of the Movie 1† visualizing the real time conversion from chiral to achiral structures. |
A similar experiment has been performed using instead of the pure acetonitrile solvent an equimolar dispersion of the ribbons to the TCE fibres suspension. The results shown in Fig. S13† are consistent with the previous observations.
The visualization of the above reported experiment was realized observing the transition from twisted fibres to nanoribbons in real time, using confocal fluorescence microscopy. A suspension of twisted fibres in TCE was suddenly diluted with ACN, leading to the simultaneous dissolution of the twisted fibres and growth of the nanoribbons. The phenomenon is presented in Fig. 5 and in the ESI Movie 1.† At t = 0, an aggregate of twisted fibres is shown, and after addition of ACN, it is observed that the aggregates dissolve while, at the same time, ribbons grow. In the movie, the two different colours, green for the chiral structures and blue for the crystalline ribbons, are related to the different emission spectra. After a lag time of about 45 min, the growth of the ribbons suddenly started, and after another approximatively 35 min, the system reached equilibrium and no more changes were observed. The observed lag time and the rapid growth of the ribbons are also typical features of a cooperative growth mechanism as described above. To gain a multiscale molecular view of the assembly process, molecular simulations have been performed in different solvents.45 We started from building a fully atomistic (all atom: AA) model for monomer Pt-PyAG (Fig. 6A). We inserted 20 initially disassembled AA-monomers into two simulation boxes filled respectively with TCE or ACN explicit solvent molecules. AA molecular dynamics simulations (AA-MD) provided a first insight into the key type of interactions involved in the self-assembly in the two environments. As seen in Fig. 6B (left), the number of molecular clusters in the system decreases over time in both cases, indicating self-assembly. However, during self-assembly the tail–tail H-bonding increases in time in TCE (Fig. 6B, right: green), while in ACN this is found substantially negligible. This is consistent with the fact that ACN molecules can form H-bonds with the monomer tails, preventing the H-bonding network between the monomer tails, similar to what seen recently in the case of benzene-1,3,5-tricarboxamide self-assembly in water–ACN co-solvents.46 The core–core interactions are present in both cases, although relatively stronger in ACN (see also below). As AA models are limited in size of the system that can be effectively simulated, we also developed consistent coarse-grained (CG) model for Pt-PyAG monomers (Fig. 6C), which allowed us to study self-assembly on a larger scale (see Methods and the ESI†).47 We inserted 400 initially dispersed Pt-PyAG CG-monomers in a simulation box filled with different types of solvents. Together with TCE and ACN, we also found interesting to simulate, for comparison, the self-assembly of the monomer in a case where the solvophobic interactions are increased, such as in octane (OCT). Starting from this latter case, during the CG-MD simulation, the CG-monomers were seen to self-assemble forming helical fibres resulting from the hierarchical aggregation of ∼5–6 stacks (Fig. 6D). The monomers interact both via core–core stacking and via interaction between the peptidic tails. Shown in Fig. S18,† the core–core interactions are found to be a stronger primary interaction between the monomers, present in all cases (stronger in ACN). On the other hands, the tail–tail interaction (stronger in OCT and TCE) dictates as a secondary interaction the structure of the fibres, where the monomer tails are gathered in the helix interior and surrounded by the monomer cores (see e.g., Fig. 6E, in red). The tilting angle between the stacked monomers gives rise to a helical assembly with pitch p ∼ 30 nm. The stability of such an arrangement was also proven by replicating one of the self-assembled helices into a long helix that has been then relaxed in OCT solvent by means of CG-MD simulation. Interestingly, when changing the solvent from OCT to TCE, the CG-MD simulation provides similar helices of ∼5 stacks, but having increased helical pitch of p ∼ 120 nm, which is in good qualitative agreement with the pitch seen in the experimental images (Fig. 2D: ∼9 helical turns per 1 μm of fibre length). Considering the reduced/increased solvophobic interaction between the Pt-PyAG monomers in TCE/OCT solvents, these results suggest that solvophobic effects play a major role in the helical arrangement of these fibres, where the helicity of the assembly may increase as a result of the stronger tendency to reduce the interactions between the hydrophilic tails and the hydrophobic solvent. This is consistent with the folding behaviour seen recently in other types of supramolecular polymers in water.48
Analogous CG-MD simulations in a CG-ACN (see Methods for details) showed the formation of very long fibres in solution, while the individual fibres tend to interact in a mirror fashion via the cores exposed to the ACN solvent (Fig. 6F). The hierarchical lateral self-assembly of such fibre pairs could give rise to the 2D growth of ribbons similar to those seen in the experiments. To test this hypothesis in a more efficient way, we took one of these fibre pairs and replicated it both along the main axis and laterally, obtaining a preformed 2D bilayer of Pt-PyAG CG-monomers. This system was proved very stable during a CG-MD simulation, supporting the hypothesis that the spontaneous formation of flat ribbons in ACN may be due to similar types of aggregates, thus also controlled by solvophobic effects.
1H-NMR (400 MHz, CDCl3, ppm): δ = 5.09–4.92 (m, 1H, >CH–), 4.23 (q, 3J = 7.1 Hz, 2H, –CH2–), 4.10–3.98 (m, 2H, –CH2–), 1.47 (s, 9H, –C(CH3)3), 1.40 (d, 3J = 7 Hz, 3H, –CH3), 1.30 (t, 3J = 7.1 Hz, 3H, –CH3).
1H-NMR (400 MHz, MeOD, ppm): δ = 8.69 (d, J = 6.1 Hz, 2H, Ar–H), 7.83 (d, J = 6.1 Hz, 2H, Ar–H), 4.64 (q, J = 7.3 Hz, 1H, >CH–), 4.19 (q, J = 7.1 Hz, 2H, –CH2–), 4.02–3.90 (m, 2H, –CH2–), 1.51 (d, J = 7.3 Hz, 3H, –CH3), 1.25 (t, J = 7.1 Hz, 3H, –CH3). 13C-NMR (100 MHz, MeOD, ppm): δ = 175.1, 174.8, 171.3, 148.2, 143.6, 124.7, 61.9, 50.8, 42.1, 18.7, 14.3. ESI-MS (m/z): 279.1 ([M]+, C13H17N3O4).
1H-NMR (400 MHz, C2D2Cl4, ppm): δ = 9.11 (d, J = 6.7 Hz, 2H), 7.44 (t, J = 8.1 Hz, 1H), 7.26 (d, J = 6.7 Hz, 2H), 7.18 (d, J = 8.1 Hz, 2H), 6.90 (d, J = 7.1 Hz, 1H), 5.90 (t, J = 5.7 Hz, 1H), 4.18–4.09 (m, 1H), 3.60 (q, J = 7.0 Hz, 2H), 3.63–3.42 (m, 2H), 0.96 (d, J = 7.2 Hz, 3H), 0.67 (t, J = 7.0 Hz, 3H). 19F-NMR (400 MHz, C2D2Cl4, ppm): δ = −65.2 (s, –CF3). HR-MS (ESI-TOF, m/z): 822.1290 (calcd 822.1299, [M + H]+. Elemental analysis: calcd (found) C 35.09% (35.17%), H 2.45% (2.65%), N 17.05% (16.95%).
The CG-MD self-assembly simulation started from 400 initially disassembled Pt-PyAG molecules immersed into explicit OCT, TCE and ACN solvent molecules. Details on the CG parameters are provided in the ESI.† All CG-systems were run for at least 1 μs of CG-MD using a timestep of 20 fs and isotropic pressure scaling at room temperature. The helical pitch of the twisted fibers in OCT and ACN was estimated by quantifying the average rotation angle of neighbor stacked Pt atoms around the main axis of the longer self-assembled filament obtained during the self-assembling CG-MD runs. The stability of supramolecular helical fibers (TCE and OCT) was tested by replicating such twisted aggregate along its main axis – until reaching a complete helix composed of 432 Pt-PyAG monomers – and equilibrating the helices by CG-MD simulations. The stability of the bilayer configuration of the system in ACN was tested in a similar way. We built a preformed bilayer composed by the lateral packing of mirror-assembled fibers pairs – for a total of 800 monomers – which was then equilibrated in explicit ACN CG-molecules (see Fig. 6G). All these preformed configurations were found stable/persistent over 2.5 μs of CG-MD simulations. Due to the shape of these assemblies, semi-isotropic pressure scaling was used in all these NPT CG-MD simulations.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d0nr04524a |
This journal is © The Royal Society of Chemistry 2020 |