Suchismita
Saha
a,
Amit
Ghosh
a,
Thomas
Paululat
b and
Michael
Schmittel
*a
aCenter of Micro- and Nanochemistry and Engineering, Department Chemie – Biologie, Organische Chemie I, Adolf–Reichwein–Str. 2, D-57068 Siegen, Germany. E-mail: schmittel@chemie.uni-siegen.de
bDepartment Chemie – Biologie, Organische Chemie II, Adolf–Reichwein–Str. 2, D-57068 Siegen, Germany
First published on 18th June 2020
The reversible transformation of multicomponent nanorotors (ROT-1, k298 = 44 kHz or ROT-2, k298 = 61 kHz) to the “dimeric” supramolecular structures (DS-1 or DS-2, k298 = 0.60 kHz) was triggered by a stoichiometric chemical stimulus. Simple coordination changes at the central phenanthroline of the molecular device by altering metal ions (Cu+ → Zn2+) or stoichiometry (Cu+, 1 equiv. → 0.5 equiv.) affected the terminal zinc(II) porphyrin units, the active sites within the machinery, changing rotational, catalytic and optical properties. In presence of added pyrrolidine, the nanorotor ROT-1 was inactive for catalysis whereas formation of the dimeric supramolecular structures DS-1 initiated a Michael addition reaction by releasing the organocatalyst from the porphyrin sites. This catalytic machinery (ROT-1 ⇄ DS-1) proved to reproducibly work over two full cycles using allosteric OFF/ON control of catalysis.
Most of the literature-known allosteric regulation has been performed using covalent receptors.20,25,26 However, in biological systems, a remarkable amount of proteins showing allosteric regulation of their enzymatic activity are multicomponent in nature.27,28 Some of these cases demonstrate that small molecular effectors allow or inhibit allosteric enzymatic regulation through control of dimerization (Fig. 1). For instance, the enzyme ATP phosphoribosyltransferase is active in its dimeric state and allosterically inhibited by added histidine triggering a transformation of the active dimeric into an inactive hexameric form.27,29
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Fig. 1 Formation of the active site by the dimerization of two protein molecules.27 |
Herein, we demonstrate how reversible allosteric regulation30 allows parallel control of three functions: ON/OFF catalysis, OFF/ON rotor operation and UP/DOWN fluorescence changes upon moving from a multicomponent monomeric assembly to a dimeric system by addition of small molecular effectors. The key to reach such multifunctional control is the stoichiometric and reversible coordination-driven transformation of a three-component nanorotor (2 equiv.) into a three-component dimeric and dynamic supramolecule (1 equiv.). The main components of both supramolecular self-assemblies are ligand 1, a phenanthroline carrying two distal zinc(II) porphyrin units, and the bis-pyridine bipeds 2a,b (Fig. 2). Indeed, this seems to be the first example of allosterically controlling multiple functions in parallel within a multicomponent machinery requiring dimerization of structures.
In detail, either by changing the stoichiometry of the metal ion (Cu+) or the metal ion itself (Cu+ → Zn2+) the coordinative situation at the central phenanthroline site in [Cu(1)(2a)]+ (ROT-1) or [Cu(1)(2b)]+ (ROT-2) was changed which regulated the binding mode at the terminal zinc(II) porphyrin (ZnPor) units providing quantitative and reversible interconversion of nanorotor (ROT-1/ROT-2) ⇄ “dimeric” supramolecule (DS-1/DS-2) (Fig. 3). This device-to-dimer transformation was used for controlling the liberation of a catalyst from the ZnPor binding site into the solution hence regulating OFF/ON catalysis. The switchable ensemble thus constitutes catalytic machinery.
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Fig. 3 Cartoon representation of the reversible transformations between nanorotor ROT-1/ROT-2 → dimeric supramolecules DS-1/DS-2. |
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Fig. 4 (a) Orthogonality between complexes [Cu(3)2]+ and 4·5. (b) Partial 1H NMR (400 MHz, CD2Cl2, 295 K) of 5, 4, [Cu(3)]+, [Cu(3)2]+, [Cu(3)(5)]+, 4·5 and 4·5 + [Cu(3)2]+. |
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Fig. 5 (a) Partial 1H NMR (400 MHz, CD2Cl2, 295 K) of 2a, 1, [Cu(1)]+, [Cu(1)2]+, ROT-1 and DS-1. (b) UV-vis spectra of 1, ROT-1 and DS-1 in CH2Cl2 at 298 K (c = 10−5 M). |
Due to the precise stoichiometry-dependent self-sorting, ROT-1 = [Cu(1)(2a)]+ (Fig. 3a) was quantitatively formed by mixing 1, 2a and [Cu(CH3CN)4]PF6 (1:
1
:
1) in CD2Cl2, irrespective of the sequence. In nanorotor ROT-1, [Cu(1)]+ acts as the stator holding the rotator 2avia Npy → [Cu(phenAr2)]+ (= HETPYP-I:
eroleptic
ridine and
henanthroline complexation)33 and Npy → ZnPor binding. Upfield shifts of proton signals i-H, 6-H and l-H from 10.34 to 10.28 ppm, 6.40 to 6.32 ppm and 6.70 to 6.64 ppm in the 1H NMR unambiguously attested the binding of 2a to [Cu(1)]+ (Fig. 5a). As monitored in the UV-vis spectrum, the red shift of the Q-band of the ZnPor from 537 to 540 nm when going from 1 to ROT-1 = [Cu(1)(2a)]+ manifested the axial binding of one pyridine foot of 2a to the ZnPor units of [Cu(1)]+ (Fig. 5b). Moreover, a single peak in the ESI-MS at m/z = 1457.8 and a single set of 1H-DOSY signals corroborated the formation of ROT-1 (ESI, Fig. S76 & S60†).
Quantitative formation of the dimeric supramolecular structure DS-1 = [Cu(1)2(2a)2]+ was achieved by mixing 1, 2a and [Cu(CH3CN)4]PF6 in a 1:
1
:
0.5 ratio in CD2Cl2 (Fig. 3a). In the 1H NMR, protons 6-H and l-H along with all other phenanthroline protons appeared at the same position as in the homoleptic complex [Cu(1)2]+ that represents the deck for both bipeds in DS-1 (Fig. 5a). Upfield shift of proton signal i-H (10.34 to 10.22 ppm), d-H (8.60 to 2.35 ppm) and c-H (7.41 to 5.52 ppm) when going from [Cu(1)2]+ to DS-1 confirmed binding of 2a (Npy → ZnPor) (Fig. 5a and ESI, Fig. S49†). In the UV-vis the red shift of the Q-band of the ZnPor unit from 537 to 543 nm (for 1 → DS-1) supported the Npy → ZnPor axial binding of 2a in [Cu(1)2]+ (Fig. 5b). Formation of DS-1 was further confirmed by ESI-MS and 1H DOSY NMR (ESI, Fig. S77 and S61†).
In ROT-1, one of the pyridine feet of the rotating biped is always attached to the central copper(I) phenanthroline thereby representing an axle for the other pyridine site that oscillates between both degenerate zinc porphyrins of the stator (cf. 50% loading of the ZnPor units). In contrast, in DS-1 all ZnPor sites are constantly occupied by the pyridine sites of the bipeds due to the pyridine:
ZnPor ratio of 1
:
1. The strong Npy → ZnPor axial binding in DS-1 was clearly supported by the upfield shift of proton signal i-H (10.28 to 10.22 ppm) in the 1H NMR and the red shift of the Q-band (Fig. 5) of the ZnPor sites (540 → 543 nm) in the UV-vis when going from ROT-1 (50% loading of the ZnPor sites by the pyridine foot of 2a) to DS-1 (full loading of the ZnPor sites by the pyridine foot of 2a).
Similarly, the 1:
1
:
1 mixture of 1, [Cu(CH3CN)4]PF6 and 2b led to quantitative formation of ROT-2 = [Cu(1)(2b)]+ where the picoline site of 2b was bound selectively to the copper(I) phenanthroline unit of [Cu(1)]+ through HETPYP-I33 interaction (Fig. 3b). The selective binding originated from the ortho-methyl substitution at the pyridine which increased the strength of the HETPYP-coordination to log
Kpic = 5.86 (ESI, Fig. S83†) and weakened the Npic → ZnPor interaction (log
Kpic = 2.72) due to steric crowding.8b,34 The upfield shift in the 1H NMR of proton signals 6-H, l-H and i-H from [Cu(1)]+ → [Cu(1)(2b)]+ proved the interaction between 2b and [Cu(1)]+ which was further verified by the red-shift of the Q-band (from 537 to 540 nm) (Fig. 6 and ESI, Fig. S86†). Formation of ROT-2 was additionally confirmed by 1H DOSY and ESI-MS data (ESI, Fig. S62 and S78†).
Unlike DS-1, mixing of 1, 2b and Cu+ in 1:
1
:
0.5 ratio did not quantitatively furnish the dimeric supramolecular structure [Cu(1)2(2b)2]+. Alike, using the model ligands there was no 100% orthogonality between [Cu(3)2]+ and Npic → ZnPor binding. In comparison with ROT-2, the picoline group of biped 2b has to sacrifice in [Cu(1)2(2b)2]+ the strong HETPYP binding at the [Cu(phenAr2)]+ unit in ROT-2 (log
Kpic = 5.86) for the weak one at the ZnPor site in [Cu(1)2(2b)2]+ (log
Kpic = 2.72). Such loss in driving force cannot be compensated by formation of the central [Cu(1)2]+ unit. The thermodynamics, however, can be remedied by using Zn2+ instead of Cu+ owing to its stronger bishomoleptic complexes with ligands of type 3 (ESI, Fig. S41†). The self-assembly DS-2 = [Zn(1)2(2b)2]2+ was indeed quantitatively furnished by mixing 1, 2b and Zn2+ in 1
:
1
:
0.5 ratio (Fig. 3b). Its formation was unambiguously proved by 1H NMR, ESI-MS and elemental analysis (ESI, page S29–30†). For instance, in the 1H NMR (CD2Cl2), the splitting of proton signal 6-H into four singlets (6′, 6′′, 6′′′ and 6′′′′-H) and l-H into two singlets (l′ and l′′-H) like [Zn(1)2]2+, the upfield shifts of c′′-H (7.22 to 6.15 ppm) and c′-H (7.42 to 5.63 ppm) from free 2b verified the formation of DS-2 (Fig. 6).
VT 1H NMR of ROT-1 was performed from 25 °C to −70 °C and changes in the signal of proton i-H served for analyzing the kinetic data (Fig. 7a). It appeared as a sharp singlet at 25 °C (10.28 ppm) but split into a 1:
1 set at −70 °C (10.33 and 10.22 ppm). The signal at 10.22 ppm was assigned to the pyridine-coordinated ZnPor whereas the signal at 10.33 ppm was allocated to the free ZnPor unit. Rotational exchange frequencies (k) at different temperatures were calculated using WinDNMR35 which provided the exchange frequency at room temperature k298 = 44 kHz. Activation parameters were derived from the Eyring plot (ESI, Fig. S57†) and are provided in Table 1.
Nanomachines | k 298/kHz | ΔH‡/kJ mol−1 | ΔS‡/J mol−1 K−1 | ΔG‡298/kJ mol−1 |
---|---|---|---|---|
ROT-1 | 44 | 46.5 ± 1.2 | 0.6 ± 0.2 | 46.3 ± 1.2 |
ROT-2 | 61 | 46.1 ± 0.5 | 1.4 ± 0.9 | 45.7 ± 0.2 |
DS-2 | 0.60 | 68.9 ± 3.6 | 43.1 ± 3.6 | 57.2 ± 0.2 |
The VT 1H NMR of ROT-2, recorded from 25 °C to −50 °C, exhibited a splitting of the sharp singlet of proton i-H into a set of two singlets (1:
1) with a coalescence temperature at −30 °C (Fig. 7b). As before, the corresponding activation parameters were determined (Table 1). The exchange frequency at room temperature was calculated as k298 = 61 kHz.
As in DS-1 all binding sites (Npy → ZnPor) are identical, even after freezing, the exchange cannot be monitored. To determine the kinetic parameters of such a process, the dissymmetric arm 2b was used in DS-2 with pyridine at one terminal and picoline at the other end.
The single set of all porphyrin protons in DS-2 manifested fast exchange on the NMR time scale at room temperature. Upon lowering the temperature, the VT 1H-NMR of DS-2 (Fig. 7c) exhibited a splitting of proton signal β-H (1:
1). Exchange frequencies (k) at different temperatures provided the activation parameters (Table 1) and k298 = 0.60 kHz.
The much lower speed in the dynamic dimeric supramolecule than that of the rotors can be easily understood by their distinct mechanisms. In the rotors ROT-1 and ROT-2, the rate determining step for rotation comprises the single detachment of the Npy axial coordination from the ZnPor unit,8c leading to an exchange rate kex = ½kdiss (½ is a statistical factor recognizing that one out of two re-attachments will lead to exchange of both site). In contrast, the mechanism of exchange in DS-2 is quite different. Firstly, in DS-2 all sites are loaded and, secondly, only the exchange of pyridine by a picoline at a given ZnPor site or vice versa is detected by NMR. Based on the highly positive activation entropy and the high activation enthalpy there is a possibility that the exchange proceeds by full dissociation/re-association of one biped.
At first, the dimeric supramolecule DS-1 was prepared by mixing ligands 1, 2a and Cu+ (1:
1
:
0.5). Its formation was confirmed by 1H NMR and fluorescence spectroscopy. Further addition of 0.5 equiv. of [Cu(CH3CN)4]PF6 to DS-1, hence changing the stoichiometry of Cu+
:
1 from 0.5
:
1 to 1
:
1, quantitatively generated nanorotor ROT-1 as validated by spectroscopic data. The transformation of the dimeric supramolecule to a “monomeric” rotor was possible by changing the tetracoordinated homoleptic copper(I) center at the central phenanthroline to a tricoordinated HETPYP-I center. Addition of 0.5 equiv. of cyclam to ROT-1 regenerated DS-1 by removing a stoichiometric amount of Cu+ as cyclam is a stronger chelating agent for Cu+ than phenanthroline.3b,8b Three complete cycles interconverting DS-1 ⇄ ROT-1 were performed and monitored by fluorescence and NMR spectroscopy (Fig. 8a, c and ESI, Fig. S50†).
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Fig. 8 Fluorescence spectra of (a) 1, ROT-1, DS-1 and (b) 1, ROT-2, DS-2 in CH2Cl2 at 298 K (λexc = 540 nm, c = 10−5 M). Fluorescence intensity changes (λem = 631 nm) vs. time over three cycles for (c) DS-1 → ROT-1 and (d) DS-2 → ROT-2 in CH2Cl2 at 298 K (λexc = 540 nm, c = 10−5 M). Copper(I) and cyclam additions are shown by red and indigo asterisk, respectively, in Fig. 8c. Additions of hexacyclen + Cu+ (1![]() ![]() ![]() ![]() |
The kinetics of the interconversion was followed by fluorescence. Ligand 1, DS-1 and ROT-1 exhibit typical ZnPor emission patterns with different intensity. In the free ligand, the fluorescence intensity is highest followed by that in DS-1 and in ROT-1 (Fig. 8a). Conversion of DS-1 to ROT-1 took 12 min whereas ROT-1 to DS-1 was finished within 6 min at room temperature, c = 10−5 M (Fig. 8c).
In order to investigate the interconversion of DS-2 → ROT-2, we first prepared DS-2 by mixing 1, 2b and Zn2+ (1:
1
:
0.5). Addition of 0.5 equiv. of hexacyclen and 1.0 equiv. of Cu+ transformed the dimeric supramolecule DS-2 into the monomeric nanorotor ROT-2 by selective interchange of the metal ion at the central phenanthroline station.8a,c,22 Now, addition of 1.0 equiv. of cyclam and 0.5 equiv. of Zn2+ regenerated DS-2 by “dimerization” of the nanorotor. Three complete interconversion cycles were successfully carried out in a highly reproducible manner as demonstrated by fluorescence and 1H NMR data (Fig. 8b, d and ESI, Fig. S56†).
Equally, the kinetic course of the interconversion was evaluated by fluorescence (Fig. 8d). The conversion of DS-2 to ROT-2, triggered by addition of 0.5 equiv. of hexacyclen and 1.0 equiv. of Cu+, took around 85 min whereas the transformation ROT-2 → DS-2 was completed within 6 min after addition of 1.0 equiv. of cyclam and 0.5 equiv. of Zn2+ at room temperature.
After testing in separate steps the function of the catalytic ON and OFF states, allosteric catalytic cycles were performed starting with the OFF state composed of 10 mol% 6·ROT-1, 7 (100 mol%) and 8 (2000 mol%) affording no product 9 after 4 h at 50 °C (Fig. 9b and ESI, Fig. S93†). Addition of cyclam (5 mol%) should remove an equimolar amount of Cu+ from the system furnishing 5 mol% of DS-1 which was expected to allosterically release the guest catalyst 6 from the ZnPor stations into solution because all ZnPor sites are now intrasupramolecularly loaded with biped 2a. Indeed, addition of 5 mol% of cyclam to the OFF state provided 39% of product 9 after 4 h at 50 °C. After realizing this ON catalytic state, consumed amount of substrates and 5 mol% of [Cu(CH3CN)4]PF6 were added. Heating at 50 °C for 4 h did not provide any further product formation, hence proving that this is an OFF state. Addition of 5 mol% of [Cu(CH3CN)4]PF6 to the ON state converted the dimeric supramolecule DS-1 to nanorotor ROT-1 with one ZnPor station free to capture all the guest catalyst 6, making it unavailable for the catalytic reaction. Two complete OFF/ON catalytic cycles were performed to demonstrate the ability of the full catalytic machinery in allosterically controlling the uptake/release of the guest catalyst (Fig. 9b).
In conclusion we have demonstrated the stoichiometry and coordination-driven reversible transformation of a multicomponent nanorotor to dimeric supramolecule by changing the coordination mode at the central phenanthroline unit. As a result of this interconversion within the machinery, allosteric tuning of OFF/ON rotor formation, UP/DOWN fluorescence and ON/OFF of Michael addition catalysis was achieved over two cycles.
This work demonstrates that self-sorting36 in combination with allosteric tuning of binding events is a powerful tool for realizing multifunctional machinery.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d0dt01961e |
This journal is © The Royal Society of Chemistry 2020 |