Nathan
Horst
a,
Srikanth
Nayak
b,
Wenjie
Wang
c,
Surya
Mallapragada
ab,
David
Vaknin
d and
Alex
Travesset
*ad
aAmes Laboratory, and Iowa State University Department of Materials Science and Engineering, Ames, Iowa 50011, USA. E-mail: trvsst@ameslab.gov
bAmes Laboratory, and Iowa State University Department of Chemical and Biological Engineering, Ames, Iowa 50011, USA
cDivision of Materials Science and Engineering Ames Laboratory, USDOE, Ames, Iowa 50011, USA
dAmes Laboratory, and Iowa State University Department of Physics and Astronomy, Ames, Iowa 50011, USA
First published on 5th November 2019
We present a coarse grained model for a system where nanocrystals are functionalized with a polymer that is a hydrogen bond acceptor, such as polyethylene glycol (PEG), and are dispersed in a solution with a polymer whose monomers consist of a hydrogen bond donor, such as polyacrylic acid (PAA) at low pH (interpolymer complexation). We determine the minimum concentration of the polymer donor to induce aggregation and the structure and dynamics of the induced (fcc) superlattice. Our results are compared to previous and new experiments.
Interpolymer Complexation (IPC), where two different polymers interact through noncovalent interactions, such as hydrogen bonds,9 has been suggested as a possible strategy to direct SL assembly.10,11 Only very recently,12 however, have the first SLs been reported, consisting of PEG-ylated gold NCs and polyacrylic acid (PAA) in solution at sufficiently low pH such that the latter is electrically neutral. Hereon, we will define a generic interpolymer complex as consisting of generic hydrogen bond acceptor (PA) and donor (PD) polymers. Our model will be such that the PA (=PEG in the experimental system) is grafted to the NC core, as shown in Fig. 1.
Fig. 1 Illustrated example of interpolymer complexation (IPC), where hydrogen bonds drive the complexation of PEG and PAA chains. |
In addition to reporting the first successful SLs by IPC, the results in ref. 12 concluded that although crystallization of NCs is initiated by hydrogen bonds, the final equilibrium state is almost solvent free, suggesting that van der Waals forces play a significant role in overall stability. Thus, although both IPC and DNA-mediated assembly are driven by hydrogen bonding, the resultant structures are completely different; while DNA SLs consist of 90% water,7 little to no water is present in the final structure induced by IPC, which more closely resembles SLs obtained from solvent evaporation.1 Hence, the potential advantage of IPC as an assembly strategy is that it shares the (a) versatility of the programmability often associated with DNA, (b) cost-effectiveness and bio-compatibility of polymers and (c) high stability typical of hydrocarbon systems, where SLs retain their structure after being removed from solution and completely dried.
The goal of this study is to develop a rigorous coarse-grained (CG) model that complements experimental observations of IPC-mediated assemblies, such as Fig. 2, answers structural questions not accessible in experiments and predicts new phenomena associated with IPC-mediated self-assembly. It is our expectation that it will become the standard model for the prediction of other general assembly methods involving hydrogen bonding. As it relates to the experiments presented here and from ref. 12, the following questions will be addressed: (1) Is there a critical concentration of PD necessary to bridge NCs and drive assembly? (2) What is the structure and composition of IPCs in the assemblies? and (3) how dynamics of assembly occur; how critical is the exchange of PD bound to the assemblies with the PD in solution in order to reach equilibrium?
Drawing from our previous experience modeling hydrogen bonding,13 it is clear that a balance must be found between the strength of a hybridization and its lifetime, which allows our system to sample the energy landscape without quenching, while making efficient use of computational resources. To explore this interaction, we first consider a solution of PA and PD chains (without NCs) where we vary the strength of the hybridization interaction, εH as shown in Fig. 4a.
We define a hybridization event as an interaction between complementary hybridizers within 1.5σH, where hybridizers have a diameter σH = 0.5, and all other CG beads in the system have a diameter σAB = 1.0. As expected, there is an increase in the number of hybridization events as εH increases, but additionally, we discover εH has clear correlation with system stoichiometry, such that an excess of one CG monomer species leads to increased hybridization of the other CG monomer, see Fig. S2 in the ESI.†
In fact, we find that for sufficiently high PD concentrations, the average number of hybridizations per CG PA bead exceeds one, with some typical situations discussed in detail in the supporting information (Fig. S3, ESI†). However, we note that each CG bead in our model represents many monomeric units of the polymer, so we interpret these situations as reflecting that many hybridizations have been established among two CG beads.
For the remainder of this work, we consider NCs of radius Rc = 2σAB grafted with NA = 35 PA chains consisting of nA = 10 monomers that serve as acceptors in the hydrogen bond interaction, see Fig. 3. PD chains consist of nD = 5 monomers (h-bond donors), and in light of the results discussed above, where hybridization is dependent on system stoichiometry, all ligand lengths are kept fixed in this study to address the primary goal of characterizing hybridization quality. The relevant parameters varied in this work are εH (hydrogen bonding strength) and PD concentration, expressed as
(1) |
We determine the value of (the coarse-grained parameter) hydrogen bonding energy εH, by establishing under what conditions hybridizations result in an attractive interaction between NCs. As shown in Fig. 4b, the PMF is repulsive for εH ≤ 11, indicating that hybridization attraction is not yet strong enough to induce aggregation. Considering all the results compiled in Fig. 4, we need to choose a value of εH where the PMF energy well is sufficiently deep that the NC pair is stable against thermal fluctuations, the number of hybridization events is high enough to induce aggregation, and the directional, short-ranged nature of hybridization interactions is preserved. To this end, all simulations are hereon performed with εH = 15, as marked by orange lines in Fig. 4. We emphasize that this coarse-grained energy represents many simultaneous single hydrogen bonds at the molecular level.
Fig. 6 (a) Percentage of CG PA beads involved in hybridization events increases with ξ but (inset) total hybridizations remain constant as NCs approach one another. (b) Cartoon representation shows intra-particle hybridizations transitioning to bridging events (BE) as NCs approach. (c) Internal energy for the entire system decreases with NC separation (r) due to more efficient packing of complementary hybridizers. (d) The number of bridging events (BE) is proportional to the depth of the PMF in Fig. 5. |
We query the polymer species present in the corona during a pair interaction, by observing all occupants of a prescribed cylinder with radius σ = 1 along the pair axis (Fig. 7a), and reporting the ratio of the species found within (Fig. 7b). This analysis clearly shows the homogeneity of the PD distribution, as this quantity does not differ between isolated NCs at large r and NCs at the PMF minimum. This effect is also independent of ξ.
Hybridization lifetimes τH play a very important role; if they exceed the simulation time, the system is quenched into an out of equilibrium state. In Fig. 8a we show hybridization lifetime as a function of ξ at the minimum of the PMF. Short lifetimes at low concentrations imply a drastic reduction in entropy, while the reduction in lifetime at larger concentrations reflects the competition among different PDs to bind to PA. In Fig. 8b we show that even in an isolated NC, hybridizations are highly dynamic and are being exchanged between different regions of the corona, depicted in Fig. 8c. We ran our simulations more than 100 times the mean hybridization lifetime to ensure proper equilibration.
An instance where a single PD chain hybridizes to PA chains which are grafted to at least two distinct NCs is defined as a bridging event (BE). These type of hybridizations are very important as they drive attraction between NCs. In Fig. 6d we show the number of BE as a function of NC separation for varying ξ. As expected, the number of BE increases with ξ. Note that, according to Fig. 6a the number of hybridizations per PA is constant, thus, Fig. 6d implies that a number of hybridized PD beads transition from intra-NC hybridizations to BE as the NCs become closer, as shown in Fig. 6b.
τOPM = (1 + 3λν)1/3 | (2) |
Fig. 9 (a) Fcc lattice free energy shows a non-monotonic dependence on ξ. (inset) Osmotic repulsion at large ξ and large aNN is evident for otherwise isolated NCs. (b) OPM prediction agrees well with the experimental IPC results presented above, experimental results in ref. 12, and our simulated lattice systems at varied ξ. |
The depth of the free energy eventually decreases as a function of ξ, a behaviour that we also observed in the analysis of the PMF. To understand this decrease, it is paramount to first note the difference in the variable ξ for the lattice and pair cases. During a pair interaction there can exist a large excess of PD even after full saturation of the corona. Indeed, to calculate the PMF, ξ must be sufficiently high that absorption into the corona is likely to occur along the interaction axis, as NCs have no local coordination in other directions. Therefore, direct comparisons with the periodic lattice are not meaningful, as local coordination is high and such PD excess cannot exist. However, non-monotonic dependence of the interaction energy on the variable ξ can be attributed to excess PD absorption in both cases, despite the difference in absolute value of ξ. In fact, the effect of PD excess is on full display in the lattice, where repulsion arises from the osmotic pressure exerted by non-hybridized PD, as shown in Fig. 11 and 12, where for small values of ξ, PD is completely absorbed into the corona, but with increasing ξ fills the voids absent of PA and exerts a significant osmotic pressure, also noticeable in the long distance tail of the free energy, Fig. 9a.
Fig. 11 Snapshots of systems for aNN = 18 with varying ξ. PD (orange) is absorbed into the NC corona until fully saturated, then occupies remaining interstitial space. |
Fig. 12 Snapshots of systems for aNN = 10 (around free energy minima). PD (orange) is well-dispersed in the SL. |
In our previous work,16 we calculated many body effects in the lattice by subtracting from the free energy the collection of calculated pair PMFs. Unfortunately, this cannot be done here as different values of ξ in periodic lattices and pair systems correspond to number densities that are not easily related. Instead, we find that the PMF serves as a case study for an isolated interaction, clearly displaying the relationship between linker-mediated hybridizations and interaction energy, as well as the non-monotonic dependence of linker-mediated interactions on the quantity ξ.
It should be noted that a single PD chain may bridge more than 2 NCs. Therefore, we define the “order” of the bridging event by O = Nteth − 1, where Nteth is the number of NCs tethered to a unique PD chain (Fig. 14b). Here, O = 1 corresponds to PD connecting just two NCs (simple bridge). Unsurprisingly, due to geometric constraints, high ordered bridging events form at small aNN, and are absent at large aNN, as shown in Fig. 14a. High ordered bridging events also seem to come at an entropic cost, as O = 1 bridges make up a higher percentage of the total bridges at large ξ, see Fig. 14c. The configurational characteristics elucidated by our analysis persist regardless of PD concentration, as evident by Fig. S5–S15 in the ESI,† clearly indicating general configurational behavior in the systems studied.
1. There is a PD concentration in the lattice where NC attractions are optimal (ξ ≈ 76); small and large values of ξ prevent attraction through absorption and osmotic pressure, respectively, see Fig. 5 and 9.
2. Interpolymer complexation is driven by characteristic bridging events consisting of PD linkers that bridge two or more NCs in a largely homogeneous distribution and the number of these events is directly related with the strength of NC interaction, see Fig. 6d, 10, 13 and 14.
3. PD is very mobile during IPC, leading to dynamic configurations that can efficiently break and re-establish hydrogen bonds, see Fig. 8.
As shown in Fig. 2, the position of the Bragg peaks is approximately independent of PAA length for molecular weights between 2k and 5k, at least. This implies that the lattice constant is also independent of PAA length, a result that is consistent with our theoretical calculations, as shown in Fig. 9b. In addition, we find very good agreement with the OPM and OTM models,17,20 both from theory and experiment, which reaffirms that IPC, although apparently similar to DNA driven assembly, results in an equilibrium structure closer to solvent evaporation, characterized by the high packing efficiency of the ligands.
We note that agreement of experimental and simulation results with OPM/OTM models, see Fig. 9b, is approximate. There is a noticeable deviation towards larger lattice constants for longer PAA (in experiments) or for higher PD concentrations (simulation). This is indicative of the presence of significant amounts of PAA/PD that make the lattice expand. Experiments for much longer lengths such as 100k, see Fig. 2, show a much larger lattice constant (peak at lower values of q), consistent with this observation, even though the structure itself is more disordered, as evidenced from the width of the Bragg peaks. Varying the length of PD would facilitate more direct comparison of experiment and simulation, but require a more extensive study that is outside the scope of this work.
We have also conducted experiments with the shortest possible PAA chains, i.e. propionic acid, which consists of a single monomer. Rather surprisingly, assembly of a high quality FCC superlattice is observed. The lattice constant, however, is clearly very large, larger than even the 100k PAA chain, see Fig. 2, thus pointing to a different form of assembly, as propionic acid cannot form bridging events, as described in this study. We may speculate that a different type of bridging events, assisted by water molecules may drive assembly. This will require a model where solvent is considered explicitly. In summary, we have provided a predictive coarse-grained model and shown that interpolymer complexation is a very robust strategy for engineering superlattices, with properties intermediate between DNA assembly and those obtained by solvent evaporation.
Non-bonded interactions were treated through Lennard-Jones interactions where most pairs interacted through Sigma repulsions with a cut-off of . The hybridization interaction was the only extended-range potential in our system, with rcut = 10σH to ensure timely NC aggregation. Intra-chain bonds were treated as harmonic oscillators, with r0 = 0.84.
Pair PMF simulations were carried out in similar fashion to our prior work,14 where final data collection was carried out over 106–107 timesteps, depending on system size. Lattice PMF simulations were carried out by the following method: a fully coordinated 2 × 2 × 2 fcc lattice of NCs, held together by harmonic bonds, was initialized at aNN large enough so that no NCs interact through non-bonded potentials. PD chains were then added to the interstitial space of the lattice, at the appropriate concentration. This lattice was gradually reduced in size, maintaining periodicity, and stopping for system equilibration at a range of aNN values for which configurations were saved. These configurations were used to run further simulations, where equilibrium data for that configuration was taken. Using this compression routine gave us confidence that we had avoided metastable minima, and allowed for free diffusion of PD through the lattice at large lattice constant.
Small angle X-ray scattering measurements were carried out at sector 12-ID B of Advanced Photon Source, Argonne National Laboratory. Samples were contained in 2 mm OD quartz capillaries and the measurements were done at room temperature. Measurements were made in transmission mode with photon energy, E = 13.3 keV using 2D Pilatus2m detector. Scattering angle was calibrated with silver behenate powder standard. Standard data reduction techniques were used to obtain the structure factor curves for the samples.12
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c9sm01659g |
This journal is © The Royal Society of Chemistry 2019 |