Open Access Article
Ginny
Karir‡
,
Nils O. B.
Lüttschwager
and
Martin A.
Suhm
*
Institut für Physikalische Chemie, Georg-August-Universität Göttingen, Tammannstraße 6, 37077 Göttingen, Germany. E-mail: msuhm@gwdg.de
First published on 26th March 2019
Phenylacetylene offers two similarly attractive π binding sites to OH containing solvent molecules, the phenyl ring and the acetylenic triple bond. By systematically varying the solvent molecule and by methylating aromatic or acetylenic CH groups, the docking preference can be controlled. It ranges from almost exclusive acetylene docking to predominant phenyl docking, depending on how electron density is deposited into the conjugated system and how large the London dispersion interaction is. FTIR spectroscopy of supersonic jet expansions is used to observe the competitive docking preferences in phenylacetylene and some of its methylated derivatives. A new data evaluation procedure that estimates band strength uncertainties based on a Monte Carlo approach is introduced. We test how well two density functionals (B3LYP-D3 and M06-2X) in combination with a def2-TZVP basis set are able to describe the docking switch. B3LYP-D3 is slightly biased towards acetylenic hydrogen bond docking and M06-2X is strongly biased towards phenyl hydrogen bond docking. More accurate theoretical predictions are invited and some previous experimental assignments are questioned.
CH) as a hydrogen bond donor and the π systems of the acetylene and benzene moieties as hydrogen bond acceptors. All three docking sites have been postulated and observed experimentally, depending on the solvent molecule and the environment.4,13,16–18 Matrix isolation is able to stabilize metastable docking sites as observed for water,12 methanol,13 formic acid14 and HCl,16 where higher energy structures were also detected along with the global minima, whereas the low temperature supersonic jet studies (IR/UV double resonance and microwave experiments) so far have only revealed a single π binding site for each binding partner (e.g. acetylenic π and phenyl π for water and H2S, respectively).2,4,15,18 This indicates that the interconversion barriers between the π docking sites are easily surmountable in the gas phase even under rapid cooling in supersonic jet expansions, such that already relatively low energy differences can act as a driving force for conformational switches. The trapping of metastable conformations appears to be difficult in the low temperature gas phase. This makes jet spectroscopy of phenylacetylenes an ideal benchmarking tool19,20 to investigate which quantum chemical methods are able to capture the subtle interplay of non-covalent interactions for this class of compounds in a quantitative way. N2 and Ar matrix isolation studies on phenylacetylene are less useful in benchmarking quantum chemical methods as these matrices perturb weakly bound complexes and may distort intrinsic binding preferences. The complex of phenylacetylene with water stands out because its acetylenic preference has been confirmed by MW spectroscopy.15 For others, only a single gas phase UV/IR study is currently available.4
Here, we apply the intermolecular energy balance concept21–23 to phenylacetylene and its meta-methylated derivative. Several examples of intermolecular balances have been described in a recent review.21 In one of the experiments, docking of methanol to diphenyl ether was studied. Diphenyl ether offers two hydrogen bonding sites to methanol. The π cloud of the phenyl ring can be an accepting site offering the possibility of OH⋯π interaction, while alternatively, the ether oxygen can be the site where methanol can form an OH⋯O hydrogen bond, establishing the two states of the balance.24 The competition between these two sites of diphenylether–methanol complexes can essentially be tipped to either side by chemical substitution on the ether or the alcohol.22,25,26 Aromatic ring methylation has been used before to tip the balance in anisole microsolvation experiments.26 While we have included the case of water and ethanol solvation, the main focus of this work is on methanol and tert-butyl alcohol, which differ significantly in their secondary dispersion interaction. Although phenylacetylene offers three docking sites, like the structurally somewhat related phenyl vinyl ether,22 only two are competitive towards alcohols and water. Both involve phenylacetylene as a hydrogen bond acceptor, either via its acetylenic (Ac) or its phenyl (Ph) π cloud. Fig. 1 (which contains two exemplary structures Ac, Ph) shows the different binding motifs of an alcohol R–OH to a phenylacetylene derivative. The third docking site in which phenylacetylene acts as a proton donor was not observed experimentally in the earlier UV/IR supersonic expansion study, being higher in energy as compared to the former two docking sites.1
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| Fig. 1 Acetylenic (Ac) and phenyl (Ph) docking of an alcohol R–OH (R = H, CH3, C2H5, C4H9) to the sliding intermolecular balance offered by R′-substituted phenylacetylene (R′ = H/CH3). | ||
In this FTIR study, we determine the docking site of the alcohol based on its observed OH stretching fundamental downshift relative to the alcohol monomer. This requires a quantum chemical method which is able to predict at least semi-quantitatively the band position of such complexes. If two isomer bands are observed, the same quantum chemical method is used to predict the IR band strength ratio for the docking sites, thus allowing for a semi-empirical quantification of the abundance ratio of phenyl-bound (Ph) to acetylene-bound (Ac) complexes. If only one isomer is observed, an upper threshold for the abundance of the missing isomer is estimated based on the same computed intensity data and the uncertainty of the band integral of the observed band. The B3LYP-D3/def2-TZVP method has been shown to perform reasonably well when investigating other OH⋯π and CH⋯O interactions.21,27 Although it has been experimentally demonstrated to overestimate the total interaction energy in similar van der Waals complexes,28 there are reasons to believe that much of this absolute overestimation cancels when looking at the energy difference between two similar docking sites. Once the assignment is established, a range of quantum chemical methods can be tested with respect to their ability to describe the correct energy order of the observed isomers.22 Here, we focus on the M06-2X functional and use the same basis set. It is imperative to include zero point vibrational energy (ZPVE) correction in this analysis, as the different binding sites differ in shallowness. The smaller these corrections for the energy difference between the competing docking sites are in the harmonic approximation, the more likely it is that anharmonicity does not distort the picture, as most of the modes in the two isomers are more or less identical and thus their anharmonicity largely cancels. On the other hand, ZPVE corrections can also be turned into an assignment aid. The larger the harmonic ZPVE corrections are, the more likely it is that deuteration favours one isomer over the other.21 ZPVE destabilization is expected to be more pronounced in the Ac isomer, which captures the alcohol in a more or less in-plane C–H⋯O–H⋯π arrangement, whereas the Ph isomer allows for some roaming of the OH group above the aromatic ring plane with reduced restoring forces. Deuteration is thus expected to increase the Ac docking isomer abundance at the expense of Ph docking.
In this work we show that phenylacetylene is an appropriate substrate for intermolecular balance experiments that measure the performance of quantum chemical calculations of hydrocarbon solvation. We start by testing the B3LYP-D3/def2-TZVP method for a number of phenylacetylene-donor molecule complexes in terms of downshifts and energy rankings, including also O-deuterated donors to secure the assignment. We show that analogous M06-2X predictions are in most cases in disagreement with experimental observation, with a systematic bias of about 1 kJ mol−1 in favour of phenyl docking. We comment on previous gas phase assignments based on UV/IR spectroscopy and different quantum chemical methods,5 which differ in some of the assignments and OH stretching wavenumbers.
The compounds are monitored simultaneously via their OH/OD and
CH stretching bands. By concentration variation, mixed dimers can be identified reliably and trimer impurities can be minimized. The FTIR method is not conformationally selective, but also does not rely on a well-behaved UV chromophore. Therefore, the relative abundance of two isomers in the absence of spectral overlap can be estimated without the risk of overlooking any IR-active ingredient in the expansion. To ensure the absence of larger clusters, the expansions are prepared at high dilution, compromising the signal-to-noise ratio. Frequency calibration of the spectral transitions is provided simultaneously. Reliable predictions for band positions and reliable experimental band strength ratios are imperative for the intermolecular energy balance concept, as are sufficiently low barriers between the isomers which can be overcome by the collisions in the early stage of the expansion. Because variations in the barrier height and uncertainties in the infrared band strength are unavoidable and because more variability in the investigated systems aids the evaluation of quantum chemical predictions, we find it more important to study a large number of systems, rather than to achieve a high signal-to-noise ratio for only a few systems. The latter would shift the main uncertainty to theoretical auxiliary quantities such as harmonic transition dipole ratios and variations in interconversion barrier. Spectral overlap between isomers can be an issue and has to be dealt with individually, potentially increasing the uncertainty for specific donor–acceptor combinations. Again, this calls for a large number of systems to identify outliers.
In order to better assess the uncertainty of our measurements of FTIR band strengths, we developed a new integration method which is an automation and extension of our previous data evaluation routine. Previously,23 several experimenters would integrate the same dataset several times and a mean and standard deviation would be calculated to account for the uncertainty in the placement of the integration window. The new method presented in this paper evaluates uncertainty using a Monte Carlo (MC) approach.31 The integration is repeated many (100
000) times while the integration window is modified and the noise in the spectrum is artificially altered. Therefore, we retrieve a more realistic estimate of the statistical component of our measurement uncertainty that includes the noise.
The MC integration algorithm can be summarized as follows:
1. The variance and autocorrelation of the noise in the input spectrum are estimated.
2. Random32 spectra with added noise are generated from the input spectrum, using the estimated noise variance and autocorrelation to generate noise samples.
3. Random integration window widths are generated.
4. For each random spectrum, bands are integrated using the random integration window widths.
5. Integral ratios and subsequently statistics of the resulting distribution over band integral ratios are calculated; if only a single band is observable, upper or lower bounds for the band integral ratio are estimated from the width of the integral distribution of the observed band.
More details to each step are provided in the ESI† (Fig. S1–S3). The new data evaluation routine was written in the Julia programming language.33 Random number generation was done using the Distributions.jl package.34
For our FTIR measurements, we used the following chemicals without further purification: phenylacetylene (Sigma Aldrich, 98%), 1-phenyl-1-propyne (Alpha Aesar, 98%), 3-methylphenylacetylene (Sigma Aldrich, 97%), methanol (Sigma-Aldrich, 99.98%), methanol-d1 (euriso-top, 99 atom% D), tert-butyl alcohol (Roth, ≥99%), tert-butyl alcohol-d1 (Sigma Aldrich, 99 atom% D), ethanol (Sigma-Aldrich, 99.8%), D2O (Sigma-Aldrich, 99.9 atom% D), H2O (demineralized, electrical conductance <0.2 μS cm−1) and He (Linde, 99.996%). In some cases, water impurities could be distilled out during the early stage of the experiment when flowing helium through the thermostated saturators, which were separately filled with the donor and acceptor compounds. Typically, 300 to 650 gas pulses were probed and the spectra were co-averaged after eliminating some scans with poorly compensated atmospheric water. Still, atmospheric water vapor is a source of excess noise in the relevant weakly shifted OH stretching region and may distort some of the band intensity ratios. Higher resolution spectra would allow for a better separation of water ro-vibrational lines and complex bands, but the low absorbance of these weakly bound complexes (typically less than log10(I0/I) = 10−4), which compete with donor molecule oligomers except for very high alcohol dilution, does not currently allow for such higher resolution FTIR spectra.
Quantum-chemical calculations were performed using the Gaussian09 (Rev. E01) suite of programs.35 The DFT functional B3LYP with Grimme's two-body D3 corrections and Becke–Johnson damping36,37 was used in combination with the def2-TZVP basis set. Spectral panels and tables are sorted in the sequence of expected Ac–Ph energy difference at this level of computation. For performance comparison, the M06-2X method was combined with the same basis set. Various guessed input geometries were used for geometry optimization to arrive at the reported minimum structures. The two competing docking sites in phenylacetylene and its meta-methylated derivatives are shown qualitatively in Fig. 1. Harmonic frequency calculations were performed to ensure that the optimized structures were minima on the potential energy surface and also, in case of B3LYP, to assign IR absorption bands. Optimization and harmonic frequency calculations were done using opt = tight and int = ultrafine keywords.38 The computed wavenumbers of the complexes were scaled to the experimental monomer OH band positions to facilitate the comparison with experimentally observed complex features.
CH as donor) were computed for various systems. As mentioned above we focused mainly on O–H⋯π complexes of methanol (m) and tert-butyl alcohol (t) with phenylacetylene (p) and its methylated derivative, 3-methylphenylacetylene (3mp) which are shown in Fig. 2. Complexes of ethanol (e) and water (w) as donors with p, 3mp as well as m and t complexes with 1-phenyl-1-propyne (pp) as acceptor were also investigated. In the supplement, these and other calculated structures are graphically summarized together with their relative zero-point corrected energy (ΔE0) and exceptions to the dominant binding motifs (Fig. S4, ESI†). Our nomenclature of the complexes lists the donor molecule acronym, connected by a dash to the acceptor molecule abbreviation, adding the acceptor docking site (Ac, Ph) as an index where needed. For example, the acetylene bound complex of m with p, is denoted as (m–p)Ac. The Ac bound complexes mostly adopt a structure having simultaneous O–H⋯π and C–H⋯O interactions (Fig. 2 and Fig. S4, ESI†). The C–H⋯O interaction is a weaker secondary interaction which stabilizes this structure more than the one in which the donor OH group sits in an out-of-plane orientation, offering only an O–H⋯π interaction. Furthermore, the acetylenic π system itself is anisotropic due to the attached phenyl ring, likely contributing to the difference between in-plane and out-of-plane coordination. In this work we do not attempt to separate between these two qualitative influences but rather focus on the observable in-plane preference. In the case of Ph bound structures the OH moiety of the donor prefers to point towards the phenyl carbon atom opposite to the acetylenic group of p or 3mp. Unlike p, 3mp offers two distinguishable docking sites for Ac bound and Ph bound structures due to methylation in meta position. Fig. 2 presents the most stable Ac bound and Ph bound structure for p and 3mp complexes. Higher energy isomers are labelled with index 2 and are shown in Fig. S4 (ESI†). In the Ac bound (m–3mp)Ac2 and (t–3mp)Ac2 complexes the aromatic methyl group and alcohol are positioned on opposite sides of the 3mp subunit. In the higher energy Ph bound (m–3mp)Ph2 complex, the OH group of methanol points towards another carbon atom of the phenyl ring (see Fig. S4, ESI†). Relative interaction energies, both electronic and ZPVE corrected, are given in Table 1. It can be seen from Table 1 that the lowest energy structure of tert-butyl alcohol complexes changes from Ac bound to Ph bound as the acceptor is changed from p to 3mp at B3LYP-D3 level. The methylation of the phenyl ring tips the balance towards Ph bound complexes whereas methylation of the acetylenic moiety of phenylacetylene in pp results in exclusively Ac bound complexes as global minima. The relative interaction energies of pp complexes and the jet-cooled FTIR spectra are given in Table S1 and Fig. S5, respectively, in the ESI.†
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| Fig. 2 Optimized geometries of acetylene and phenyl bound complexes of phenylacetylene (p) or 3-methylphenylacetylene (3mp) with methanol (m) or tert-butyl alcohol (t) at B3LYP-D3/def2-TZVP level. | ||
| B3LYP-D3/def2-TZVP | M06-2X/def2-TZVP | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Complex | I Ph/IAc | ΔEel | ΔE0 | σ Ac/σPh | c Ph/cAc | c Ph/(cAc + cPh) | ΔEel | ΔE0 | σ Ac/σPh | c Ph/cAc | c Ph/(cAc + cPh) |
| ΔEel = EelAc − EelPh; ΔE0 = E0Ac − E0Ph.a Including a 0.1 (20%) increase in cPh/(cAc + cPh) and enlarged error bar for the possibility of a second populated Ac isomer distorting the Boltzmann analysis. | |||||||||||
| et–p | <0.4 | −3.1 | −1.5 | 1.5 | <0.6 | <0.4 | −1.5 | 0.1 | 1.0 | <0.4 | <0.3 |
| eg–p | <0.4 | −2.1 | −0.9 | 1.7 | <0.7 | <0.4 | −0.3 | 0.7 | 1.1 | <0.5 | <0.3 |
| m–p | <0.6 | −3.1 | −1.4 | 1.7 | <1.0 | <0.5 | −1.0 | −0.1 | 1.1 | <0.7 | <0.4 |
| t–p | <0.6 | −2.6 | −1.3 | 1.5 | <0.9 | <0.5 | −1.1 | −0.1 | 1.4 | <0.8 | <0.4 |
| wd–p | <0.3 | −2.7 | −1.1 | 2.9 | <0.9 | <0.5 | −0.3 | 0.6 | 2.0 | <0.6 | <0.4 |
| md–3mp | 0.5 ± 0.4 | −1.4 | −0.7 | 1.4 | 0.8 ± 0.5 | 0.5 ± 0.3a | 0.3 | 0.9 | 1.1 | 0.6 ± 0.4 | 0.5 ± 0.3a |
| w–p | <0.5 | −2.7 | −0.6 | 3.8 | <2.0 | <0.7 | −0.3 | 0.8 | 2.7 | <1.4 | <0.6 |
| m–3mp | 0.6 ± 0.2 | −1.4 | −0.5 | 1.4 | 0.8 ± 0.3 | 0.6 ± 0.2a | 0.3 | 1.2 | 1.1 | 0.6 ± 0.3 | 0.5 ± 0.2a |
| td–3mp | >1.6 | −0.3 | 0.3 | 1.5 | >2.3 | >0.7 | 0.3 | 0.9 | 1.4 | >2.1 | >0.7 |
| t–3mp | >1.6 | −0.3 | 0.6 | 1.5 | >2.4 | >0.7 | 0.3 | 1.2 | 1.4 | >2.3 | >0.7 |
CH stretching region (Fig. S6, ESI†) but because there is heavy spectral overlap between monomeric and complexed phenylacetylene, it is very hard to detect the signature of the complex. In between the methanol monomer m (structured and broad due to overall and internal rotation around the CO axis despite a rotational temperature near 10–20 K) and the homodimer (m)2, fundamental transitions of the mixed dimers are observed. For the unsubstituted phenylacetylene (upper trace c), a single band is found at 3622 cm−1. For 3mp (bottom trace a), the corresponding transition is observed somewhat lower at 3620 cm−1, but it is now accompanied by a less downshifted second band of similar intensity at 3639 cm−1. The comparison of the complex spectra (m–3mp) with the spectrum of m alone in the OH stretching region shows that these product features were not present in the 3mp-free expansion and thus can be unambiguously attributed to the complex between m–3mp (Fig. S7, ESI†). Based on earlier studies of related compounds4,13 and approximate quantum chemical calculations, it is likely that these two signals are due to acetylene or phenyl docking of the methanol. To find out which is which, the analogous spectrum for O-deuterated methanol (md) bound to 3mp was measured (centre trace b). After linear frequency scaling to the same monomer position, it looks very similar to the non-deuterated case (bottom trace a), except for a slightly reduced intensity of the less shifted band, close to the limit of statistical significance. Deuteration reduces the hydrogen bond weakening effect of ZPVE, in particular for the more localized, stiffer interactions. It is qualitatively plausible and robustly confirmed by quantum chemical calculations for all investigated systems (Table 1) that this is always the case for the acetylenic docking site (Ac), more so than for the phenyl docking site (Ph). Therefore, the closely balanced docking situation in m–3mp is shifted slightly towards Ac by deuteration and also shifted in the same direction by removal of the methyl group in meta position at the phenyl ring. A successful quantum chemical prediction should be able to describe this switch from balanced to Ac-docking preference. As will be elaborated below, this trend is qualitatively captured by both computational methods (Table 1). For B3LYP-D3, the predicted energy advantage for Ac docking increases from 0.5 to 1.4 kJ mol−1 (from bottom to top in Fig. 3). For M06-2X, there is an even larger shift by 1.3 kJ mol−1 from the bottom to the top system, but now the m–3mp prediction is that Ph docking should be more attractive than Ac docking by 1.2 kJ mol−1. This is in quantitative disagreement with the bottom spectrum in Fig. 3. Therefore the B3LYP-D3 level is in better agreement with the experimental observations. However the possibility of an intensity contribution from (m–3mp)Ac2 ((md–3mp)Ac2) to the observed band of (m–3mp)Ac ((md–3mp)Ac) at 3620 cm−1 (2671 cm−1) cannot be ruled out since the computed wavenumber shifts are very similar for both isomers. This may give Ac a statistical advantage and potentially rescue the M06-2X prediction. This isomerism adds uncertainty to the m–3mp intensity analysis, but the most straightforward interpretation based on the deuteration experiment remains a somewhat stronger stability and shift for Ac docking in m–3mp. We account for the situation in the subsequent Boltzmann population analysis (vide infra) by adding 20% (0.1) to the determined Ph abundance fraction cPh/(cAc + cPh) for m–3mp and md–3mp and by enlarging the symmetric error bar accordingly, to keep the lower limit unchanged. This does not significantly change any of the later conclusions about the switching point, but it shows that such a sequence of three complexes is not yet sufficient to allow for firm conclusions about the quality of theoretical methods. Success could be coincidental and the observed intensity ratio may not reflect the actual abundance in a quantitative way. Furthermore, observation of two docking sites might also be attributed to kinetic trapping, if the barriers between the docking sites are too high to be overcome. This calls for a broader study of complexes, which should include cases where a single isomer is observed despite a close lying competitor site.
Fig. 4 provides such examples, where now m is replaced by t. Single docking sites are observed in all cases. For p as the acceptor molecule, there is a mixed complex band between the t and (t)2 signals. meta-Methylation of the phenyl group increases the wavenumber of the band, which would be unexpected if the docking site stayed the same. We thus conclude that Ac docking is observed for p and Ph docking for 3mp, independent on whether t is deuterated or not. Evidently, in all three cases the interconversion barrier is low enough to prevent kinetic trapping and the methylation effect is strong enough to tip the balance entirely from one to the other site (within our detection limit). We note beforehand that formally both theoretical methods are able to explain this switch at the right place (Table 1), although in the B3LYP-D3 case one would expect some Ac docking for td–3mp (only 0.3 kJ mol−1 energy difference) and in the M06-2X case one would strongly expect some competing Ph docking for t–p (only 0.1 kJ mol−1 energy difference).
Clearly, such analyses of isolated intermolecular balance cases with deuteration effects can give hints about the predictive performance of quantum chemical methods, but the evidence remains circumstantial. More powerful is a systematic variation of the hydrogen bonded donor, as shown in Fig. 5. In addition to the non-deuterated examples from Fig. 3 and 4, it includes ethanol (e) and water (w). In the case of water (see the ESI† for the D2O case, Fig. S8), potential mixed dimer bands are heavily overlapped by water monomer ro-vibrational transitions, but we can assume the presence of the Ac isomer.1,15 Ethanol exists in two conformers, the trans (et) and the gauche (eg) form with et being the lowest energy conformer.39 As the trans conformer is more stable by 0.5 kJ mol−1 and relaxation from gauche to trans ethanol is efficient in supersonic expansions, it is expected that the complex with trans ethanol is preferentially observed40,41 as long as this is not overcompensated by an enhanced stability of eg in the complex. When estimating this relative stability, it is not only important to compare the calculated complex stabilities, but also the ability of the theoretical method to reproduce the experimental monomer difference. When taking this into account, the B3LYP energy sequence is predicted to be Ac(et) < Ac(eg) < Ph(eg) < Ph(et) and the M06-2X sequence is Ph(eg) < Ac(eg) < Ph(et) < Ac(et). At the B3LYP level, Ac docking of et provides the global minimum, once the calculated eg–et energy difference of 0.0 kJ mol−1 is adjusted to the experimental value of 0.5 kJ mol−1.41 At the M06-2X level Ph docking of eg provides the global minimum before and after adjustment. For the two e isomers, similar complexation shifts are predicted, but because eg is experimentally 16 cm−1 lower, the absolute predictions differ. The experimental spectrum (trace a of Fig. 5) is consistent with an Ac(et) assignment, if one considers analogous deviations between B3LYP prediction and experiment for related cases (Fig. 5). Like in the previous cases, ambiguity in assignment is reduced by analogy but not completely removed due to the deficiency in the monomer description. The supplement also contains spectra for m and t complexes with 1-phenyl-1-propyne (pp). This system is not included in Fig. 5 because it is too far from a molecular energy balance. B3LYP-D3 calculations predict the Ac docking to be >2 kJ mol−1 more stable than Ph docking (Fig. S4, S5 and Table S1, ESI†) due to the electron donating effect of the terminal methyl group and the spectra indicate the exclusive presence of the corresponding complex band. The most important aspect of Fig. 5 is the systematic slight overestimation of the harmonic B3LYP-D3 shift magnitude for Ac docking, compared to experiment, once the monomer positions are matched by scaling to compensate for the major part of OH stretching anharmonicity and harmonic B3LYP error. For Ph docking in 3mp, a systematic underestimation of the calculated shift is found instead. It is generally more challenging to accurately predict weak hydrogen bond shifts than typical shifts of the order of 100–200 cm−1. Nevertheless, even an imperfect theoretical model can assist in a robust spectral assignment by transferring the error from one system to a related one. Table 2 summarizes the underlying spectral predictions for the B3LYP-D3 calculations in the double-harmonic approximation (for an analogous table of the M06-2X predictions see the ESI,† Table S2).
| Donor | Monomer | Complex | Coordination | |||||
|---|---|---|---|---|---|---|---|---|
| Ph | Ac | |||||||
| ω f OH/cm−1 | σ OH/km mol−1 | f Scaling factor | ΔωfOH/cm−1 | σ OH/km mol−1 | ΔωfOH/cm−1 | σ OH/km mol−1 | ||
| a The OD stretch of the donor is considered in these deuterated variants. b In case of w and wd the shift is calculated from the symmetric OH and OD monomer stretch, respectively. | ||||||||
| et | 3676 | 23 | 0.9646 | et–p | −16 | 122 | −67 (−62) | 178 |
| eg | 3660 | 18 | 0.9644 | eg–p | −17 | 98 | −64 | 163 |
| m | 3686 | 25 | 0.9667 | m–p | −16 | 115 | −73 (−64) | 191 |
| t | 3642 | 12 | 0.9615 | t–p | −16 | 124 | −62 (−55) | 192 |
| wda | 2672 | 4 | 0.9795 | wd–pb | −2 | 20 | −34 (−30) | 57 |
| mda | 2718 | 18 | 0.9791 | md–3mp | −21 (−33) | 79 | −57 (−47) | 110 |
| w | 3657 | 4 | 0.9695 | w–pb | −5 | 32 | −54 (−44) | 122 |
| m | 3686 | 25 | 0.9667 | m–3mp | −27 (−47) | 132 | −76 (−66) | 186 |
| tda | 2687 | 9 | 0.9746 | td–3mp | −12 (−28) | 73 | −47 | 106 |
| t | 3642 | 12 | 0.9615 | t–3mp | −16 (−41) | 124 | −64 | 186 |
We note that some of our IR assignments of phenylacetylene complexes differ from previous work.4 For water, we agree in assigning the observed complex to Ac docking,1,15 but our OH stretching wavenumber (3613 cm−1) differs significantly from the one reported before (3629 cm−1, Fig. 4 in ref. 4).4 Although our spectra suffer from monomer ro-vibrational line congestion, this discrepancy is difficult to explain and too large for calibration inaccuracies in the laser experiment.
More importantly, we disagree by assigning the methanol complex to Ac docking, whereas previously it was assigned to Ph docking. Here, the experimental wavenumbers differ less (3622 vs. 3615 cm−1) and the difference might simply be attributed to laser calibration. Our assignment rests on the very systematic deviation between B3LYP-D3 prediction and experiment for a large number of systems, supported by isotope effects in the methylated derivative presented in Fig. 3. For ethanol, the wavenumber difference is again small (3614 vs. 3619 cm−1). Note that the sign of the experimental deviation is now negative, but our assignment is inverted in full analogy to methanol. We justify our Ac assignment (somewhat weakened by trans–gauche isomerism, although Ac docking for eg would fall in a region of no signal, see Fig. 5a) by shift analogy across systems, whereas the Ph assignment in the literature is based on a
CH stretching Fermi resonance argument.5 Perhaps the most uncertain assignment is that of t–3mp, which has not been measured before and where the single observed shift of −41 cm−1 is intermediate between the B3LYP prediction for Ac docking (−64 cm−1) and Ph docking (−16 cm−1). In such a case, comparison to related cases such as m–3mp is instructive, where the predicted shifts are about 10 cm−1 more negative. There, Ac docking is observed at −66 cm−1 and Ph docking at −47 cm−1, such that the t–3mp band is likely due to Ph docking. Furthermore, in a purely experimental argument, Ac docking is hardly affected when moving from m–p to m–3mp. It appears unlikely that it moves from −55 to −41 cm−1 in the sequence t–p to t–3mp, again confirming Ph docking. We are thus confident that our docking assignments are correct, because they fit the alkylation series of the solvent molecules smoothly. However, independent checks by UV/IR or MW spectroscopy in controversial cases would be welcome to confirm this.
:
1 weighting of the B3LYP-D3
:
M06-2X predictions for energies and abundances would actually provide a rather satisfactory description of the experimental observations in the present case. This is shown in the table of contents figure for the present results, for illustrative purposes only. Although the conformational freezing temperature will vary from system to system depending on the individual barrier size separating the docking sites, the general trend of the population as a function of energy difference indicates a conformational freezing temperature of the order of 100 K. We have also carried out calculations on the experimentally studied phenylacetylene–H2S18 as unambiguous Ph docking preference can be a valuable additional data point but the energy difference between Ac and Ph H2S complexes is greater than 2.5 kJ mol−1, Ph being the global minimum, at both levels of theory (Fig. S9, ESI†). The strong Ph preference makes this system less suitable for the detection of theory deficiencies in predicting the correct global minimum. More accurate predictions of the Ph:Ac balance in the phenylacetylene system and its derivatives for the different alcohols are welcome from dedicated theory groups.
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| Fig. 6 Semi-empirical abundance fraction cPh/(cAc + cPh) of Ph bound complexes of various donors (w, wd, m, et/eg, t, td, md) with phenylacetylene (p) and 3-methylphenylacetylene (3mp) as a function of the predicted zero point corrected (at B3LYP-D3/def2-TZVP level for solid symbols and M06-2X/def2-TZVP for empty symbols) energy difference between the Ac and Ph coordination sites (ΔE0). The error bars indicate the upper or lower bounds or uncertainty intervals for a confidence level of 95%, see Table 1. Negative energies indicate that Ac coordination is predicted to be more stable. | ||
We invite theoreticians to test their own preferred quantum chemical and vibrational dynamics methods against this subtle benchmark, also with respect to better frequency predictions. We also invite UV/IR and MW spectroscopists to reinvestigate the structural preferences we found and to strengthen this benchmark experiment. Extending our experimental efforts to aromatic compounds with more than one acetylenic substituent42 could be interesting.
C–H⋯O Complex in the Hydrogen Bonded Systems of Phenylacetylene: A Matrix Isolation Infrared and Ab Initio Study, J. Chem. Sci., 2016, 128, 1557–1569 CrossRef CAS.Footnotes |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/c9cp00435a |
| ‡ Current address: Inorganic and Physical Chemistry (IPC), Indian Institute of Science, CV Raman Road, Bengaluru 560012, Karnataka, India. |
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