James A.
Jarvis‡
a,
Maria
Concistre
b,
Ibraheem M.
Haies
bc,
Richard W.
Bounds
b,
Ilya
Kuprov
b,
Marina
Carravetta
b and
Philip T. F.
Williamson
*a
aCentre for Biological Sciences, University of Southampton, SO17 1BJ, Southampton, UK. E-mail: P.T.Williamson@soton.ac.uk
bSchool of Chemistry, University of Southampton, SO17 1BJ, Southampton, UK
cDepartment of Chemistry, College of Science, University of Mosul, Mosul, Iraq
First published on 27th February 2019
Magic-angle spinning solid-state NMR is increasingly utilized to study the naturally abundant, spin-1 nucleus 14N, providing insights into the structure and dynamics of biological and organic molecules. In particular, the characterisation of 14N sites using indirect detection has proven useful for complex molecules, where the ‘spy’ nucleus provides enhanced sensitivity and resolution. Here we exploit the sensitivity of proton detection, to indirectly characterise 14N sites using a moderate rf field to generate coherence between the 1H and 14N at moderate and fast-magic-angle spinning frequencies. Efficient numerical simulations have been developed that have allowed us to quantitatively analyse the resulting 14N lineshapes to determine both the size and asymmetry of the quadrupolar interaction. Exploiting only naturally occurring abundant isotopes will aid the analysis of materials with the need to resort to isotope labelling, whilst providing additional insights into the structure and dynamics that the characterisation of the quadrupolar interaction affords.
Despite the size of the NQI and the width of resulting signal, ultra-wideline excitation methods developed by Schurko and co-workers have provided accurate NQI parameters at 14N sites in a number of organic and pharmaceutical compounds.1–3 The resolution of this method is inherently limited by the width of static 14N signals, which overlap and hinder interpretation, limiting this technique to compounds with few (currently fewer than 3) unique 14N sites.
Methods for detection of overtone (Δm = ±2) transitions on static samples,4–6 and more recently under MAS7–12 and DOR13 have provided alternative methods for characterizing 14N sites. Unlike Δm = ±1 14N signals, overtone signals are not affected by the large (MHz) quadrupole broadening. However, there are sensitivity concerns when exciting this “forbidden” transition, which are further exacerbated by the slow nutation and correspondingly low excitation bandwidth of overtone signals, making simultaneous detection of multiple 14N overtone signals difficult.8
A third strategy for detection of 14N is the indirect detection method, pioneered independently by Gan and Bodenhausen's laboratories,14–25 where 14N sites are detected via their interaction with coupled spin-1/2 ‘spy’ nuclei; typically 1H or 13C, using pulse sequences qualitatively similar to HMQC experiments. Transfer of polarisation between the 14N and the ‘spy’ nucleus occurs due to high-order cross-terms between the quadrupolar and 14N‘spy’ dipolar Hamiltonians, known as the ‘residual dipolar splitting’ (RDS), as well as a contribution from the J-coupling, in experiments known as J-HMQCs. Alternatively, polarisation transfer can be driven by the recoupling of the 1H/14N dipolar coupling using rotary resonance (R3), REDOR or symmetry based recoupling sequences, in sequences that have been generally termed D-HMQC experiments.19,26,27 Similarly, double cross-polarization schemes have also been proposed for indirect detection which function well at higher spinning speeds.28 These indirect techniques benefit from the sensitivity and resolution that are afforded by the ‘spy’ nuclei and do not require excitation or detection of the entire first-order broadened 14N spectrum. Accordingly, they have found application to the study of structure and dynamics of a number of systems.18,29,30 One of the major obstacles to the more widespread application of these techniques is their relatively poor spy nucleus/14N transfer efficiencies, which usually result in a ∼90% drop in sensitivity compared to the 1H spin-echo, and the strong dependency on high 14N RF amplitudes,31 this is particularly acute at moderate spinning speeds (<60 kHz). This, in turn, renders the accurate de novo determination of 14N NQI parameters from these experiments difficult, since precise determination of the quadrupolar coupling constant (CQ) and asymmetry parameter (η) requires fitting of the 14N lineshape, which cannot be achieved without high quality spectra with a high S/N ratio.
In this study we present a method for indirect detection of 14N signals via1H's with enhanced efficiency at moderate to fast MAS frequencies (35–70 kHz), with transfer efficiencies of up to 27.5%, enabling acquisition of 1H/14N correlation spectra with improved signal/noise ratios and well-defined lineshapes in the 14N dimension. This method, which is derived from our earlier work on the detection of 14N via13C,32 differs from previously published methods of indirect 14N detection based on the HMQC pulse sequence, in that polarisation transfer occurs not under free evolution or established methods of heteronuclear dipolar recoupling, but rather under relatively long (100s μs) periods of moderate (30–70 kHz) RF irradiation on the 14N channel (see Fig. 1). As described in our earlier studies, during these periods of irradiation both single and double quantum coherences are generated with efficiencies in excess of 20% of the initial equilibrium magnetization.32 As per previous indirect detection sequences the indirect 14N signals in 2D spectra are not affected by the typically large (MHz) first order quadrupolar interaction providing that the t1 increments are rotor synchronised and the magic-angle accurately set. This results in 14N signals at a frequency which is the sum of the chemical shift and second order isotropic quadrupolar shift (δisoQ), given for the general case in ppm by:29
![]() | (1) |
![]() | (2) |
![]() | (3) |
The simulation of indirectly detected 14N lineshapes is difficult since the lineshape depends on numerous parameters, including quadrupolar broadening, and the orientation of the quadrupolar tensor with respect to the dipolar and CSA tensors. Therefore, determination of 14N NQI parameters has not been previously attempted due to (a) poor efficiency of indirect detection methods leading to noisy and ill-defined 14N lineshapes unsuitable for fitting, and (b) computationally expensive nature of simulating these experiments. In this work, we address both of these issues and present a highly efficient 1H/14N correlation experiment, and fast and accurate simulations which in combination allow the de novo determination of 14N NQI parameters from organic solids with a variety of 14N sites with various NQI parameters. These fast and accurate numerical simulations of each 14N site allows the fitting of simulations to experimental lineshapes and the simultaneous determination of 14N NQI parameters at multiple sites from a 2D data set.
The pulse sequence for indirect detection of 14N via1H used in this work is shown in Fig. 1. Pulse lengths for 1H pulses were π/2 = 1.55 μs, π = 3.10 μs on both samples, 14N pulses for excitation and reconversion were applied at 62.5 kHz for 575 μs, and 30 kHz for 390 μs for L-His and His·HCl·H2O, respectively. The L-His spectrum was recorded with 112 scans per t1 increment, with 160 complex increments and a recycle delay of 2 s and the His·HCl·H2O spectrum was recorded with 64 scans and 254 t1 increments with a recycle delay of 2 s. Both were recorded using States-TPPI.33 Both datasets were zero-filled to 2048 × 2048 points and 2D Fourier transformed without a window function.
Experiments on NAV were performed on a Bruker Avance II spectrometer at 20 T (Larmor frequencies of 850 MHz and 61.4 MHz for 1H and 14N) using a JEOL 1 mm double resonance MAS probe. The sample was spun with a MAS frequency of 78 kHz. Spectra were acquired using the pulse sequence in Fig. 1. 1H pulses were π/2 = 1.1 μs, π = 2.2 μs and 14N excitation and reconversion pulses were applied at 72 kHz for 370 μs. 128 complex t1 increments were recorded with 136 scans per increment, in a phase sensitive manner, using States-TPPI.33 The recycle delay was 3 s. Data was zero-filled to 2048 points in each dimension before 2D Fourier transform. 3D 14N resolved 1H/1H correlation spectra were acquired the pulse scheme shown in Fig. 1B. Following 14N evolution, protons were allowed to evolve under the proton chemical shift prior a period of RFDR proton/proton mixing34 prior to detection. Data was acquired with States-TPPI33 in both indirect dimensions with 16 and 32 increments in the indirect 14N and 1H dimensions respectively. Data was processed in nmrPipe35 and visualised in Analysis 2.4.0, modified to include 14N parameters.36 In all spectra, the 14N dimension is referenced to the 14N resonance of NH4Cl at 39.3 ppm, ensuring that the 14N shifts can be compared directly with values on the scale typically used for referencing 15N in biological solids.37
Sample | Site | δ (ppm) | C Q (MHz) | η | Orientation (α, β, γ) | ||
---|---|---|---|---|---|---|---|
14N CQ | 14N CSA | 1H CSA | |||||
a Measured on 15N using CPMAS. b Ref. 7. c Calculated values using CSD reference code: HISTCM12. d Ref. 43 and 44. As referenced to NH4Cl at 39.3 ppm. e Ref. 45–47. As referenced to NH4Cl at 39.3 ppm. f Ref. 48. g Ref. 49. h Ref. 50. | |||||||
His·HCl·H2O | NH3+ | 47.3a,d | 1.32c | 0.06 | 0, 0, 0 | — | 109, 72, 172 |
Nδ | 189.8a,d | 1.53c | 0.23 | 0, 90, 0 | −71.18, 1.5, −7.2 | 102.1, 66, −84 | |
Nε | 177.2a,d | 1.33c | 0.94 | −75, 181.5, −7.2 | 90, 196, −86 | ||
L-His | NH3+ | 41.6a | 1.22b | 0.15 | 0, 0, 0 | — | 109, 72, 172 |
Nε | 168.9a | 1.44 | 0.92 | 0, 90, 0 | 75, 181.5, −7.2 | 90, 196, −86 | |
NAV | N1 | 127.7 | 3.21f | 0.32 | 13.2, 90, 103g | 51, 20, 0e | 103.2, 0, 193h |
Fig. 2A shows the 1H/14N correlation spectrum of His·HCl·H2O, recorded at 14.1 T, under 35.5 kHz MAS. Three peaks are observed, corresponding to the three protonated nitrogen sites in this molecule. The NH3+, Nδ and Nε and sites appear at 14N shifts of 100 ppm, 263 ppm and 280 ppm, respectively. The transfer efficiency of this experiment was 27.5% at Nε, 24.4% at Nδ and 7.5% at NH3+ sites, expressed relative to a 1H spin echo on the same sample using delays equal to the length of applied 14N pulses. These efficiencies are comparable with or in excess of those reported in the literature for the same or similar compounds acquired with both J- and D-HMQC sequences. Using the J-HMQC sequence under ultrafast MAS (90 kHz), which is optimal for the 1H detected J-HMQC sequence since 1H coherence lifetimes that these experiments are particularly sensitive to increase significantly with MAS, 14N transfer efficiencies of 7.55% and 9.75% with respect to 1H spin echo were recently reported for the Nε and Nδ sites in His·HCl·H2O.51 Using a D-HMQC sequence, with R3 recoupling, transfer efficiencies of 5–6% have been reported for the NH3+ site in glycine at 20 kHz MAS.16 The experiment performed here was optimised (in terms of 14N offset and pulse length) such that efficiency was maximally distributed over the two heterocyclic 14N sites, and as such, 14N pulse widths and amplitudes are possible that increase the efficiency at any of the three sites, at the expense of signal intensity at the other sites. This results in a spectrum with a quality and signal/noise ratio such that subtle spectral features such as the shoulders on the peaks of Nε and Nδ are observed which can aid in the characterisation of the quadrupolar interaction.
Fig. 2B shows a 1H/14N correlation spectrum of L-His, recorded at 14.1 T under 40 kHz MAS. In this spectrum only two peaks are observed which are the NH3+ and Nε sites at 100 ppm and 278 ppm 14N shifts, respectively; the unprotonated Nδ site is not detected. Similar transfer efficiencies were achieved as those for His·HCl·H2O, with 20.0% and 16.6% of 1H spin echo signal recorded at Nε and NH3+ sites, respectively. This experiment was optimised for an even distribution of intensity between the two 14N sites and could be optimised to achieve a higher signal intensity at one site, potentially at the expense of that at the other.
Comparing the peaks from the Nε and NH3+ sites in L-His to the peaks from the same sites in His·HCl·H2O, there are differences in both 14N frequency and peak shape. The 14N frequency may be used to determine 14N δisoQ at each site. Contributions from the 14N chemical shift and 14N δisoQ to the observed 14N shift at each peak in the spectra of L-His and His·HCl·H2O are separated by subtracting the contribution from the isotropic chemical shifts, which are shown in Table 1. These were determined from a separate natural abundance 15N CPMAS experiment performed on each sample. For both materials, the measured values of 14N δisoQ are tabulated in Table 2.
Sample | Site | δ isoQ expt.a (ppm) | δ isoQ calc.b (ppm) |
---|---|---|---|
a The centre of gravity of the 14N peak in the indirect dimension – 15N δisoCS from Table 1. A ±5 ppm error is associated with measuring the 14N frequency from the spectra. b Calculated from CQ and η from Table 1 using eqn (2), with Larmor frequencies calculated from B0 = 14.1 T for histidine sites, and B0 = 20.0 T for NAV. | |||
His·HCl·H2O | NH3+ | 55.4 | 69.5 |
Nδ | 90.2 | 94.9 | |
Nε | 85.8 | 91.1 | |
L-His | NH3+ | 58.4 | 59.7 |
Nε | 105.4 | 105.9 | |
NAV | N1 | 207.1 | 211.5 |
The δisoQ can be used to estimate the magnitude of the CQ and η at each site, using eqn (1)–(3). A contour plot of values of δisoQ at 14.1 T, calculated from eqn (1), as a function of the magnitude of the CQ and η are shown in Fig. S1 (ESI†). As expected from eqn (2), CQ and η are correlated, however at this field the δisoQ shows only a limited dependence on the asymmetry parameter η and thus CQ can be readily constrained to a range of ∼200 kHz irrespective of the asymmetry parameter. In L-His the NH3+ and Nε sites are determined to have CQ tensor magnitudes of 1.00–1.15 MHz and 1.37–1.58 MHz respectively, and the NH3+, Nε and Nδ sites in His·HCl·H2O have magnitudes of 1.00–1.15 MHz, 1.28–1.48 MHz and 1.32–1.52 MHz, for all possible values of η. The CQ of the NH3+ site in both compounds can be constrained to a smaller range of CQ magnitudes, since χq and, therefore, 14N δisoQ is less dependent on η when the CQ is smaller. The agreement of the 14N δisoQ determined from indirect detection methods in this paper, as compared to those calculated from literature values for 14N chemical shift and NQI tensors in the histidine compounds studied here is demonstrated in Table 2. In general, the 14N δisoQ observed in this work is smaller than that expected from literature values obtained by other techniques, or CASTEP calculated values. This discrepancy is most severe at the amine sites of both histidine molecules, with the His·HCl·H2O experimental NH3+ 14N δisoQ being 14.1 ppm lower than the calculated value, and that site in L-His was found to be 9 ppm lower than the literature/calculated value. At the remaining heterocyclic sites, the Nε site in His·HCl·H2O was found to deviate most from the 14N δisoQ value calculated from literature NQI parameter values, at 5.3 ppm. These deviations, being most severe for the highly mobile primary amine sites in histidine compounds, may be due to comparisons being made with NQI parameters determined by different techniques at cryogenic temperatures rather than room temperature, freezing out motions that could scale the 14N NQI in our experiments, or comparisons with CASTEP calculations that do not take into account molecular motions.
![]() | ||
Fig. 3 RMSD plots of simulated and experimental 14N lineshapes. Plots for the NH3+ (A) Nε (B) and Nδ (C) sites in His·HCl·H2O and the NH3+ (D) and Nε (E) sites in L-His. The magnitude of the CQ was arrayed in steps of 0.05 MHz from −0.25 to +0.25 MHz from the initial value, and η was arrayed in steps of 0.05 from −0.25 to +0.25 about a region spanning the predicted η for each nitrogen site based on the figures in Table 1. In all cases, contour lines are spaced by 5% of the maximum RMSD value. Errors estimated at the 10% RMSD level are CQ = 1.1 ± 0.3 MHz, η = 0.3 ± 0.3 for (A), CQ = 1.4 ± 0.08 MHz, η = 0.64 ± 0.04 for (B), CQ = 1.5 ± 0.1 MHz, η = 0.26 ± 0.06 for (C), CQ 1.1 ± 0.3 and η poorly defined (see text for discussion) for (D), CQ = 1.4 ± 0.15 MHz, η = 0.90 ± 0.06 for (E). The single black contour line in each plot indicates the δisoQ for each site calculated from the measured 14N shift δisoQ. |
There is a strip of relatively good agreement (RMSD < ∼0.3) through the RMSD plot for each 14N site where the simulated 14N δisoQ is consistent with that observed experimentally. A single black contour line through each plot marks the experimentally observed 14N δisoQ, which are also plotted on the contour plot in Fig. S1 (ESI†), and tabulated in Table 2. This line generally coincides with the area of lowest RMSD in each plot. This shows that the largest contribution to the quality of the simulations fit is determined from the 14N δisoQ, which is to be expected since it determines the position of the peak. In the RMSD plot for the Nδ of His·HCl·H2O, Fig. 3C, a single RMSD minimum where the RMSD is <0.15 (darkest blue contours) is observed. This covers a range of CQ = 1.49–1.51 MHz, and η = 0.22–0.34, which is in close agreement with the CASTEP calculated values at this site, CQ = 1.53 MHz, and η = 0.23, as well as literature values of CQ = 1.47 MHz, and η = 0.27.52 Additionally, visual comparison of the simulated lineshape with the experimental lineshape (Fig. 2A, yellow traces) shows a good agreement. This plot demonstrates that using a simulation fitting approach, one can define η to a range of ∼±0.1, which allows the CQ to be determined with a precision of tens of kHz, which is at least an order of magnitude more precise than one can achieve considering only the 14N δisoQ.
In the RMSD plots for the Nε sites of both His·HCl·H2O (Fig. 3B) and L-His (Fig. 3E), the fit of the lineshape with respect to η is somewhat less robust. In the case of the Nε site in His·HCl·H2O, two RMSD minima <0.2 are observed, at CQ = 1.29–1.3 MHz, η = 0.93–0.97, and CQ = 1.39–1.41 MHz, η = 0.60–0.68. The former of these minima, however, is consistent with the calculated values for this site, of CQ = 1.33 MHz, η = 0.94, as well as reported literature values of CQ = 1.29 MHz, η = 0.95.52 For the Nε site in L-His, the same general pattern is observed, with two RMSD minima in similar positions with respect to η as those observed at the same site in His·HCl·H2O (CQ = 1.35 MHz, η = 0.95–1.00, and CQ = 1.5 MHz, η = 0.60–0.65). However, the fit is not as good as that of the Nε site in the hydrochloride salt; in L-His the RMSD minima are broader, and the RMSD is not as low (minimum RMSD = 0.24). This is probably due to there being less well-defined features in the experimental lineshape at this site (as shown in Fig. 2B) compared to the Nε in His·HCl·H2O (Fig. 2A). However, the Nε sites are expected to have similar chemical environments and hydrogen bond geometries, and therefore similar 14N spectral parameters in terms of their 14N EFG and CSA tensors which give rise to the features observed in the 14N lineshapes, and one of the RMSD minima (at CQ = 1.35 MHz, η = 0.95–1.00) is consistent with expected values.
The NH3+ sites in both His·HCl·H2O and L-His show a poor fit of the simulated lineshape with respect to η, with the minimum RMSD encompassing almost the whole range of η values simulated, and not falling below RMSD = 0.3. This means it is not possible to use these plots to constrain the CQ at either site more precisely than was achieved by considering simply the 14N δisoQ.
In the case of the His·HCl·H2O the rather poorly defined minima reflects the featureless nature of the peak without any discontinuities, shoulders or splittings, making a distinctive fit difficult. This may be due to the fast 1H T2* decoherence at this site leading to a broadening of the signal and the loss of any distinctive features, indeed simulated spectra exhibited well defined splittings and shoulders before the application of the apodization to match the experimentally observed decay. We attribute this rapid relaxation to the molecular motions present at the site,53–55 which, in the case of NH3+ groups have previously been shown to influence the SQ 14N lineshape.18
At the NH3+ site in L-His, a well-defined splitting was observed in the 14N lineshape. However, the fit of the simulated spectra to this lineshape was the least satisfactory of all those investigated here, with a minimum RMSD = 0.35. As the experimental and simulated slices (Fig. 2B, red traces) show, the experimental spectrum observed was significantly broader, with more features, than the best fit simulated spectrum. The reason for this may be that at the NH3+, the 14N is coupled to three separate protons, which cannot be resolved in the 1H spectrum, and so their contributions to the 14N lineshape are superimposed in the 14N dimension. The simulated lineshape only takes into account an approximation of the spin system with 14N coupled to a single amine proton. This would mean that the simulation only accounted for part of the experimental lineshape, and that the remaining features were due to coupling to the other protons at the NH3+. Similar effects could also arise through the presence of conformational disorder in the sample or the presence of multiple polymorphs.
The differences observed between the fitted NH3+ lineshape and those experimentally obtained may also reflect the limitations of our current simulations which ignore the effects of relaxation and motional processes. Although such effects could be incorporated into the calculations, these simulations are already computationally demanding and, practically, close to the limit of what we can achieve in a reasonable timeframe (several weeks of supercomputer time) when fitting a grid of parameters to experimental data. In contrast; fits of the heterocyclic 14N sites exhibit a better fit with the experimental data, with the CQ and η in good agreement with published or calculated values. This is particularly clear for the Nδ site where the larger CQ is larger.
Fig. 4B shows a contour plot of the RSMD of simulated spectra with respect to the experimental 14N lineshape in NAV as a function of the CQ and η used in the simulations. A comparison of the best-fit 14N simulated lineshape with the experimental lineshape is seen in the projections in Fig. 4. The quality of the fit is high, with a minimum RMSD = 1.5, however the RMSD minimum is relatively broad; covering a region of CQ magnitude of 75 kHz (CQ = 3.1 MHz–CQ = 3.175 MHz), and range of η values of 0.32 (0–0.32). The range of values covered by this RMSD minimum slightly underestimates the literature values of CQ = 3.21 MHz, η = 0.32.48 However, the black contour line which indicates the 14N δisoQ calculated from the measured 14N shift at the centre of gravity of the 14N lineshape is also underestimated by the best RMSD fit, and in fact agrees very well with the literature values. The lack of accuracy with which the simulations fit the data suggest that there are features of the experimental 14N lineshape that are not accounted for in the simulations. The reason for this is unclear. Simulations to ascertain if the relative orientations of the quadrupolar, dipolar and chemical shift anisotropy influenced the lineshape were conducted (see Fig. S3 and S4, ESI†). Simulations in the absence of the chemical shielding anisotropy (CSA) (Fig. S3, ESI†) show that the proton lineshape is strongly correlated to the β Euler angle describing the orientation of the quadrupolar tensor with respect to the 1H/14N dipolar coupling tensor, whilst the influence of the corresponding α Euler angle is limited to the lineshape. Similarly, introduction of the CSA into the simulations (Fig. S4, ESI†) resulted in minor changes to the lineshape. Although the effects of tensor orientation are pronounced when the linewidths are small, many of these factors are masked with the currently attainable experimental resolution, which together with the computationally demanding nature of the simulations and large parameter space precludes a more rigorous statistical fitting of the lineshape. Alternatively, it is plausible that the signal is broadened or shifted by higher-order terms (>2) in the quadrupolar Hamiltonian that are not accounted for in the simulations and not removed by MAS. For sites with lower (<1.5 MHz) quadrupolar couplings, it was verified that these terms did not affect the simulated lineshapes. However, this was not verified for the case where the quadrupolar coupling was large (∼3 MHz) and high order terms are expected to be more significant, as running the simulations with the full Hamiltonian was found to be prohibitively time consuming. Finally, it may be that the 14N spectrum of this site is broadened by high mobility of the amide nitrogen, although we acknowledge that this is not reflected in the size of the quadrupolar interaction.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c8cp06276e |
‡ Current address: Department of Life Sciences, Imperial College, SW7 2AZ, London, UK. |
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