Open Access Article
Elena N.
Kotelnikova
a,
Anton I.
Isakov
a and
Heike
Lorenz
*b
aDepartment of Crystallography, Saint Petersburg State University, Universitetskaya emb. 7/9, 199034 Saint Petersburg, Russia
bMax Planck Institute for Dynamics of Complex Technical Systems, Sandtorstrasse 1, 39106 Magdeburg, Germany. E-mail: lorenz@mpi-magdeburg.mpg.de; Tel: +49 391 6110 293
First published on 17th April 2018
The thermal behavior of discrete phases formed in the respective systems of malic acid enantiomers and L-enantiomers of the amino acids valine and isoleucine was studied using the temperature-resolved PXRD method. In the (S)-malic acid–(R)-malic acid system, thermal deformations in crystal structures of stable compounds (enantiomer S, racemates RSI and RSII, and non-equimolar compound S3R) and polymorph transformations of metastable compounds (racemate RSIII and non-equimolar compound 3S1R) were examined. In the L-valine–L-isoleucine system, thermal deformations in crystal structures of stable compounds L-Val and L-Ile and non-equimolar compound V2I were investigated. Thermal deformation analysis included plotting the temperature dependence of the unit cell parameters and volume, calculating thermal deformation tensors, plotting figures of thermal expansion coefficients (CTE), and estimating the extent of thermal deformation anisotropy. In all the cases studied, the maximal thermal expansion was observed in the direction of the weakest hydrogen (malic acid) or van der Waals (valine and isoleucine) intermolecular bonds, i.e. in the directions closest to that perpendicular to the dimer molecule chains (malic acid) or to molecular layers (valine and isoleucine). The strongest anisotropy of thermal deformations in monoclinic crystals was observed in the ac plane, in which the symmetrically unfixed angle β can vary.
Examinations of thermal deformations in crystal structures of organic substances are much scarcer. This fact was mentioned by B. K. Saha8 in a recently published review that summarizes data on thermal expansion of organic crystals. Some years before, C. C. Sun9 reported statistics of such investigations based on a survey of the Cambridge Structural Database (CSD). Both reviews8,9 revealed significant progress in studies of this type within the last few decades. However, a relatively high percentage of the works concerns thermal expansion of organometallic compounds,10,11 solvates,12 and organic salts,13 while only a minority focuses on pure organic compounds14–25 and their various complexes, including co-crystals.26–29 Some authors reported thermal expansion data obtained for different polymorphs,18–24 isoskeletal compounds,25 and solid solutions.18,19 Among the papers we have found, only two works address substances formed in chiral systems, both of which published recently. An article by B. Nicolaï et al.30 presents results of the thermal expansion of L-ascorbic acid, and an article by N. Taratin et al.31 is related to thermal deformations in the crystal structures of diastereomeric L-threonine and L-allo-threonine and two particular solid solutions in this system. Chiral organic compounds participate in a vast variety of natural and industrial processes occurring at various temperatures; therefore, discovering the causalities governing their high-temperature behavior is not only of fundamental significance but also of an applied one.
This article presents results of studying thermal deformations in crystal structures of discrete phases in two chiral systems, namely, (S)-malic acid–(R)-malic acid and L-valine–L-isoleucine, using temperature-resolved PXRD. In the first system, composed of the malic acid enantiomers, non-equimolar 1
:
3 and 3
:
1 discrete compounds as well as three racemic compound polymorphs exist. L-Valine and L-isoleucine were shown to constitute a 2
:
1 intermolecular compound. The present work is a continuation of our previous research on these chiral systems.32–35
Approximated temperature dependencies of unit cell parameters were used for calculations of the crystal structure thermal expansion coefficients (CTE) α, 10−6 °C−1, along the three perpendicular axes of the thermal deformation tensor (α11, α22, α33), as well as parameters (αa, αb, αc, αα, αβ, αγ) and volume (αV). Calculated CTE values allowed plotting the figures of thermal expansion coefficients on the ac plane of the crystal structure for monoclinic compounds and plotting the 3D figure of CTE for the triclinic compound. μij is the angle between the corresponding tensor axis αii and unit cell axis j. The angle determines the orientation of the CTE figure with respect to the unit cell. Calculations of the thermal expansion tensor and plotting of the CTE figures were carried out using the programs DTC38 (monoclinic crystals) and RTT39 (triclinic crystals).
:
3 and 3
:
1 stable (SR3 and S3R) and metastable (1S3R and 3S1R) compounds. The crystal structures of the S-enantiomer,41 racemates RSI42 and RSII43 and compound S3R are known.35 Detailed specifications of all the phases are given in our highlight article published recently.35 Structural peculiarities of the discrete compounds in this system are reflected in the particular character of their thermal deformations that will be described and discussed below.
These temperature dependencies were used to calculate the coefficients of thermal expansion CTE (α, 10−6 °C−1) along the three mutually perpendicular axes of the thermal deformation tensor (α11, α22, α33), as well as the CTE of parameters (αa, αb, αc, αβ) and volume (αV) of the enantiomer monoclinic cell. The results are compiled in Table 1. In the conventional orientation of monoclinic crystals, one of the tensor axes (α22) is positioned along the direction b (the 2 or 21 axis or the axis normal to the plane of symmetry),1 and therefore, α22 = αb. In Fig. 1A, the projection of the CTE figure onto the ac plane, i.e. the plane that includes the symmetrically unfixed angle β of the enantiomer crystal structure, is shown. In order to plot a fragment of the crystal structure, the CSD data (COFRUK10)48 were applied. As seen in Fig. 1A, the maximal thermal expansion (α11) of the crystal structure of (S)-malic acid occurs along the direction of the bisector of the obtuse monoclinic angle a^c. This direction is close to that perpendicular to the elongation of dimer molecules' chains.
| Compound | α 11 | α 22 | α 33 | 1μ3c = α33^c | α a | α b | α c | α β |
|---|---|---|---|---|---|---|---|---|
| S | 185.0 | 70.1 | 27.4 | −42.0 | 125.0 | 70.1 | 98.0 | 94.4 |
| RSI | 179.0 | 58.5 | 5.88 | −42.4 | 61.2 | 58.5 | 84.9 | −92.8 |
| RSII | 14.5 | 59.4 | 183.0 | −46.7 | 65.3 | 59.4 | 94.0 | −89.6 |
The temperature dependencies were used to calculate the parameters of the thermal deformation tensor and the CTE parameters of the monoclinic cells of both racemates, given in Table 1. On that basis and applying CSD data,48 DLMALC11 (RSI) and DLMALC (RSII), the projection of the CTE figure onto the ac plane of the crystal structures of racemates RSI and RSII is plotted in Fig. 1B and C. Maximal thermal expansion of both compounds' crystal structures (α11 and α33, respectively for RSI and RSII) occurs along the direction of the bisector of the acute monoclinic angle a^c (Fig. 1B and C). This direction is close to that perpendicular to the axis of elongation of the dimer molecule chains.
Racemate RSIII was detected by the present authors32,33 and its crystallization conditions were reported in our earlier works.32,35 The melting point of RSIII (123 °C) is only one degree lower and three degrees higher than the melting points of RSI and RSII, respectively. It does not undergo polymorph transitions. This raises the question of which of the two modifications (RSI and RSIII) has to be considered as the more stable one.
Therefore, a sample consisting of a physical mixture of RSI and RSIII was prepared and used in heating experiments. The resulting PXRD patterns are shown in Fig. 2. For convenience, two of the characteristic peaks of each component are used for comparison. In the temperature range between 25 and 110 °C, the ratio of the peak intensities gradually shifted towards the RSI phase, at 120 °C, RSI became the predominating phase, and at 123 °C, the RSIII phase converted into RSI completely. Obviously, the solid–solid (polymorphic) phase transformation of one mixture component into the other in the presence of the latter49 occurred. The RSIII phase transformed into RSI in the presence of RSI. The TRPXRD results are in accordance with the DSC data, as well as with results of storing and slurring experiments.35 Thus, it was proven that the RSIII modification is metastable with respect to RSI.
![]() | ||
| Fig. 2 PXRD patterns (2θCuKα) of a sample containing a physical mixture of equal amounts of malic acid racemates RSI and RSIII measured at various temperatures. | ||
:
3/3
:
1 discrete compounds
:
3/3
:
1 discrete compound of malic acid. Triclinic cell parameters of compound S3R at various temperatures were calculated using 35 peak positions (ESI:† Table S4). Heating this compound induces only thermal deformations: all the linear unit cell parameters a, b, and c, two angle parameters β and γ, and the unit cell volume V steadily increase, while the angle α undergoes continuous decrease (ESI:† Fig. S4). The melting point of the compound is 117 °C.
Table 2 contains the calculated parameters of the thermal deformation tensor and the CTEs of the triclinic cell parameters of compound S3R, and Fig. 3 shows the resulting figure of its thermal expansion coefficients. The CTE figure is presented as a three-dimensional diagram for convenience and projected onto the triclinic cell of the S3R crystal structure. Data of our previous work35 were used to plot a fragment of the compound's crystal structure. It is revealed that the maximal thermal expansion (α22) of the S3R crystal structure occurs along the direction, which is substantially perpendicular to the elongation of its molecular chains.
| α 11 | α 22 | α 33 | μ 1a = α11^a | μ 2b = α22^b | μ 3c = α33^c | α a | α b | α c | α α | α β | α γ |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.0 | 146.4 | 2.7 | 59.5 | 55.6 | 35.4 | 91.0 | 87.8 | 34.4 | 28.5 | 55.4 | 32.0 |
![]() | ||
| Fig. 3 The CTE figure of the crystal structure of malic acids' non-equimolar discrete compound S3R plotted as a projection onto the triclinic unit cell. | ||
Compound 3S1R is a metastable monotropic polymorph of compound S3R.33,35 As shown in Fig. 4, with heating, it undergoes polymorphic phase transition into the stable S3R phase in the temperature range of 60–80 °C. At 110 °C, only S3R is left, which melts at 117 °C.
![]() | ||
| Fig. 4 PXRD patterns (2θCuKα) of malic acids' metastable non-equimolar discrete compound 3S1R measured at various (selected) temperatures. | ||
The shapes of the CTE figures of compounds S, RSI, RSII (Fig. 1), and S3R (Fig. 3) are substantially similar reflecting the anisotropic behavior of their thermal deformations. The degree of anisotropy of crystal structure deformations in the ac plane can be expressed by the following formula:1Δ13 = (α11 − α33)/(α11 + α33) providing degrees of anisotropy of 0.74, 0.94, and 0.85 for S-malic acid and racemates RSI and RSII, respectively. These values do not show considerable differences, and the least extent of thermal deformation anisotropy is observed for the enantiomer. The degrees of thermal deformation anisotropy of the S3R crystal structure in the ac, ab and bc planes can be calculated accordingly: Δ13 = (α11 − α33)/(α11 + α33) = 0.91, Δ21 = (α22 − α11)/(α22 + α11) = 0.40, and Δ23 = (α22 − α33)/(α22 + α33) = 0.96. Thus, the least anisotropic deformation occurs in the ab plane which can also be seen at the CTE figure of S3R in Fig. 3.
It is obvious that thermal expansion is inversely proportional to the strength of bonding between molecules or atoms. Hydrogen bonds between the molecular chains in the crystal structures of all studied compounds are much weaker than the bonding within the chains. For example, the average distance between molecules within the chains (O…O distance) in racemate RSI is 2.675 Å, while the O…O gap between these chains is not less than 2.859 Å.48 Consequently, when heating the substance, the space between the chains increases more intensely than that between molecules inside the chains. Therefore, the maximal thermal expansion occurs in the direction nearing the perpendicular to the elongation of the molecular chains. The deviation from the perpendicular does not exceed 17°. This deviation can also be indicative of shear deformations occuring in the crystal structure together with thermal deformations. The shear deformations cause shifting (slipping) of the dimer chains in relation to each other in the direction of their elongation. The shear deformations correlate with changes of the unit cell angle parameters, which are not symmetry-fixed.1 In the case of monoclinic crystals, this is the angle β, and in the case of triclinic crystals, these are angles α, β, and γ.
Depending on the crystal structure orientation with respect to coordinate axes, the directions of the maximal and minimal expansion are the tensor parameters α11 and α33 (S and RSI), α33 and α11 (RSII), and α22 and α33 (S3R), respectively (Tables 1 and 2). The maximal expansion direction in the monoclinic crystals of (S)-malic acid and racemates RSI and RSII lies along the bisector of the angle between the a and c(a^c) axes (Fig. 1). When the S-enantiomer is heated, the β angle increases (ESI:† Fig. S1). The bisectors corresponding to the directions of the greatest and weakest expansions divide the related obtuse angle a^c and its adjacent angle in halves (Fig. 1A). Heating racemates RSI and RSII causes the β angle to decline (ESI:† Fig. S2 and S3), while the bisectors corresponding to the directions of the maximal and minimal expansions halve the acute a^c angle and its adjacent angle, respectively (Fig. 1B and C).
The relative volume expansions, ΔV, of all the discrete compounds are rather close, being 2.1%, 2.3%, 2.2%, and 3.0% for S, RSI, RSII, and S3R, respectively. These values, however, were defined in the individual temperature ranges confined by the existence range of each compound, i.e. from room temperature to the melting point. As the latter differ, the correct way to compare ΔV of various compounds is to define a common temperature range, e.g., from ∼25 to 100 °C. In this case, the relative volume expansions of discrete compounds S, RSI, RSII, and S3R are 2.1% 1.8%, 1.9%, and 1.4%, respectively.
The S-enantiomer has the lowest melting point in the system. It is composed of alternating layers of molecules of the same chirality (–S–S–S–S–), has hydrogen contacts between the molecular chains, and has the least value of Δ13 and the greatest ΔV. Compounds RSI, RSII and S3R exhibit relatively high melting points. The racemates contain alternating chains of molecules of different chiralities, i.e. –S–R–S–R–, while compound S3R is composed of alternating homochiral (–S–S–S–S–) and heterochiral (–S–R–S–R–) chains.35 Racemate RSI is characterized by the presence of hydrogen bonds between the molecular chains and a relatively high ΔV value, while RSII is distinguished by the absence of such bonding and a relatively small ΔV. Compound S3R has a triclinic cell and shows significantly lower volume expansion in comparison with the enantiomer and the racemates. The triclinic cell provides greater space for shear deformations, since it contains three non-fixed angle parameters α, β, and γ. Shear deformations can partially compensate thermal expansion. Most significant thermal deformations in the crystal structure of compound S3R were observed in the ac and bc planes, as shown by the related Δ13 and Δ23 parameters.
:
1 compound V2I (with V and I for L-Val and L-Ile, respectively),34,35 which is the only example of a non-equimolar compound known, whose crystal structure contains molecules of different amino acids of the same chirality. The crystal structures of the compounds in the system are already established (L-Val,51L-Ile,52 and V2I compound34).
Results of TRPXRD investigations demonstrated that L-Val, L-Ile, and V2I do not undergo any solid phase (polymorphic) transformations,37 which is supported by the temperature-resolved diffraction patterns shown in ESI:† Fig. S8A–C. Therefore, the discussion below concerns the results of studying thermal deformations of the above-mentioned discrete phases.
| Compound | α 11 | α 22 | α 33 | μ 3c = α33^c | α a | α b | α c | α β |
|---|---|---|---|---|---|---|---|---|
| L-Val | 17.6 | 67.1 | 82.9 | 77.0 | 21.3 | 67.1 | 79.6 | −18.9 |
| L-Ile | 53.3 | 54.6 | 12.4 | −36.0 | 22.8 | 54.6 | 39.2 | −22.3 |
| V2I | 11.6 | 54.6 | 84.0 | 101.5 | 76.6 | 54.6 | 14.5 | −21.3 |
![]() | ||
| Fig. 5 Projections of the CTE figures on the ac plane of monoclinic unit cells in the crystal structures of compounds Val (A) and Ile (B) and discrete compound V2I (C) (adapted from ref. 37). | ||
The calculated degrees of thermal deformation anisotropy, Δ13, in the crystal structures of L-Val, L-Ile, and compound V2I are 0.65, 0.62, and 0.76, respectively. The differences between these values are not too great; however, compound V2I shows a slightly higher degree of deformation anisotropy than the others. The directions of the maximum thermal expansion in the three crystal structures are close to those perpendicular to the molecular layers, while the directions of the minimum thermal expansion lies on the plane of the molecular layer.
Relative volume expansions ΔV of enantiomers Val and Ile and compound V2I are 2.6%, 2.0%, and 2.5%, correspondingly. The beginning sublimation temperatures are found at 205 °C for Val and at 215 °C for Ile and compound V2I (±5 °C). Despite the analogous order of the molecular layer packing in the crystal structures of Val and Ile, the differences in their thermal expansions and the beginning sublimation temperatures are significant. In contrast, the extent of thermal expansion in the Val crystal structure is close to the corresponding parameters of compound V2I despite their different arrangements of molecular layers.
These relative similarities and dissimilarities in the thermal behavior of Val, V2I and Ile can be understood from quantitative estimation of the number of van der Waals contacts between the molecular layers in crystal structures of the compounds being studied.34,35 The reason for the relatively lower or higher number of contacts between the related molecular layers in Val and Ile is the nature of the end group, which is a hydrogen atom in the Val molecule and a methyl group in Ile. Therefore, the V2I compound (Val
:
Ile = 2
:
1) is similar to Val in terms of the number of van der Waals contacts. This explains why the volumetric thermal expansion αV of the V2I crystal structure is only slightly lower than that of Val, but significantly higher than that of Ile (Table 4).
| (S)-Malic acid–(R)-malic acid | L-Valine–L-isoleucine | L-Threonine–L-allo-threonine30 | |||
|---|---|---|---|---|---|
| Compound | α V | Compound | α V | Compound | α V |
| S | 282 | L-Val | 168 | L-Thr | 109 |
| RSI | 244 | L-Ile | 120 | (L0.34,L-a0.66)-Thr | 117 |
| RSII | 257 | V2I | 150 | (L0.90,L-a0.10)-Thr | 119 |
| S 3 R | 212 | L-aThr | 107 | ||
In the (S)-malic acid–(R)-malic acid system, the only changes the stable discrete compounds (enantiomers, racemate RSI and non-equimolar compounds S3R and SR3) undergo in the temperature range up to their melting point are thermal deformations (thermal expansion). This conclusion is supported by monotonically increasing or decreasing curves in the temperature dependencies of the monoclinic (S, RSI) and triclinic (S3R) unit cell parameters. Thermal deformation data obtained for discrete malic acid compounds as well as the figures of their thermal expansion coefficients are concordant with the peculiarities of the crystal structures of these phases. In all of these cases, maximal thermal expansion occurs in the direction which is close to that perpendicular to the plane of dimer molecule chains. In general, the shapes of thermal expansion figures of all studied crystal structures are similar and reflect the anisotropy of thermal deformations, where a noticeable part consists of shear deformations. In contrast, when heated, the metastable discrete compounds (racemates RSII and RSIII and compounds 3S1R and 1S3R) also experience thermal deformations, but in addition, in the vicinity of their melting points, they convert into stable phases as follows: RSII → RSI, RSIII → RSI, and 3S1R (1S3R) → S3R (SR3).
In the L-valine–L-isoleucine system, all discrete phases existing (L-Val, L-Ile and non-equimolar compound V2I) are stable. In the temperature range up to their respective sublimation temperatures, they show only thermal deformations, and the direction of their maximal thermal expansion is close to that perpendicular to the plane of their molecular layers. The reason for the differences observed in sublimation temperatures, volumetric expansion values, degrees of thermal deformation anisotropy and orientations of projections of the CTE figures in relation to the monoclinic cell axes arises from the different proportions of hydrogen atoms and methyl groups present in the molecule and, correspondingly, from the different proportions of van der Waals contacts between molecular layers in the crystal structures of L-Val, L-Ile and V2I.
Thermal deformations in the discrete phases discussed show certain similarities: 1) with thermal deformations of diastereomers and solid solutions in the amino acid L-threonine−L-allo-threonine system recently studied by the authors31 and 2) with thermal deformations of L-ascorbic acid published by B. Nicolaï et al.30
The system of the levorotatory diastereomers of threonine (C4H9NO3) is a representative of a rare class of chiral systems forming continuous solid solutions. When heated, both diastereomers, L-threonine (L-Thr) and L-allo-threonine (L-aThr), and the investigated solid solutions of composition (L0.34,L-a0.66)-Thr and (L0.90,L-a0.10)-Thr, experience only thermal deformations. The degree of thermal deformation anisotropy of the orthorhombic cells (S.G. P212121) varies depending on the composition. The most significant manifestations of anisotropy were observed for the single diastereomers; even negative thermal expansion was obtained in the direction close to the plane of the molecular layer. Anisotropy manifestations are considerably weaker in solid solutions; the greater the concentration of the admixture molecules in the crystal structure, the weaker the anisotropy nature. Such thermal behavior is based on different numbers, lengths, and geometries of hydrogen contacts.31 We think that peculiarities of thermal behavior of the discrete phases in the systems discussed above have a similar basis. The values of volumetric thermal expansion of phases formed in the system of malic acid enantiomers, valine and isoleucine enantiomers and threonine diastereomers are compared in Table 4.
According to Nicolaï et al.,30L-ascorbic acid (C6H8O6) does not undergo polymorphic transitions when heated. Its monoclinic cell parameters (S.G. P21) linearly increase and the thermal expansion of its crystal structure is anisotropic in the observed temperature range (110–440 K). The maximal expansion is found along the b axis. Hydrogen bonding is practically perpendicular to this axis.30 In other words, hydrogen bonding occurs mostly within molecular layers. Therefore, the maximal thermal expansion takes place in the direction of the weak intermolecular forces, i.e. in the direction which is perpendicular to the molecular layers. This interpretation agrees with our discussion of thermal deformations for discrete compounds in the three chiral systems mentioned above. Further, the volumetric thermal expansion value of αV = 120 × 10−6 K−1 for L-ascorbic acid30 is comparable to the data provided for discrete compounds in Table 4.
The extent of thermal expansion of the linear unit cell parameters and volume of inorganic crystal structures1 is usually 1.5–2 times less than the corresponding values found in organic compounds (including chiral compounds). This is caused by the presence of hydrogen and van der Waals intermolecular bonds in the crystal structures of organic substances, which are significantly weaker than covalent, ionic, and metal chemical bonding in the structures of inorganic substances. The degree of anisotropy of the crystal structure thermal expansion of organic compounds is governed by the number and direction of hydrogen bonds. Thus, the value and anisotropy of thermal expansion (or compression) are general characteristics of crystalline materials and can be used to derive correlations of the composition–structure–properties type. Ascertainment of such correlations in chiral systems is essential for crystal chemistry and technology.
Footnote |
| † Electronic supplementary information (ESI) available: Fig. S1–S8 and Tables S1–S7. See DOI: 10.1039/c7ce02047c |
| This journal is © The Royal Society of Chemistry 2018 |