Ingrida
Rostášová
a,
Mária
Vilková
b,
Zuzana
Vargová
*a,
Róbert
Gyepes
cd,
Miroslava
Litecká
a,
Vojtěch
Kubíček
c,
Ján
Imrich
b and
Ivan
Lukeš
c
aDepartment of Inorganic Chemistry, Faculty of Science, P. J. Šafárik University, Moyzesova 11, SK-041 54 Košice, Slovak Republic. E-mail: zuzana.vargova@upjs.sk
bNMR Laboratory, Faculty of Science, P. J. Šafárik University, Moyzesova 11, SK-041 54 Košice, Slovak Republic
cDepartment of Chemistry, Faculty of Education, J. Selye University, Bratislavská cesta 3322, SK-945 01 Komárno, Slovak Republic
dDepartment of Inorganic Chemistry, Faculty of Science, Charles University, Hlavova 2030/8, CZ-128 43 Prague 2, Czech Republic
First published on 13th June 2017
The interaction of aminomethylphosphonic acid (H2amp) with the Zn(II)–cyclen complex and the formation of ternary complexes was studied by potentiometry and 31P NMR titrations. Data evaluation of each of the methods separately was found to be insufficient. Thus, data obtained from the both methods were simultaneously treated with the computer program OPIUM. The determined stability constants indicated only weak (logK ∼ 3) coordination of aminomethylphosphonic acid through the phosphonate group. The chelating coordination mode with the participation of the amine group was not confirmed. In excess of Zn(II)–cyclen, the formation of dinuclear complexes, in which two Zn(II)–cyclen units are bridged by a phosphonate group, was observed and their presence was confirmed by mass spectrometry. Such a coordination motif is typical for phosphonates in the solid state and also for phosphatases.
Investigation of the Zn(II)–cyclen system has been mostly focused on the recognition of small organic molecules occurring in organisms,5–8 on nucleic acids, which have been summarized previously,9 and also on phosphates.10,11 In our group, we have studied the interaction of the Zn(II)–cyclen system with amino acids12 and dipeptides.13 The high affinity of amino acids for the Zn(II)–cyclen system can be explained by significant non-bonding contributions (hydrophobic and/or π–π stacking).12 The study of dipeptide interaction indicated carbonyl–carboxylate chelate binding in the acidic range and carbonyl–amine chelate or only terminal amino group coordination in the slightly alkaline range.13
This paper continues with our investigation of the Zn(II)–cyclen interaction with bioactive molecules. Here, we deal with interaction with a phosphorus analogue of glycine, i.e. aminomethylphosphonic acid (H2amp).
Natural aminophosphonates have been found in many different organisms, from prokaryotes to eubacteria and fungi, mollusks, insects and others.14–17 They play an important role in the interaction with many metalloenzymes. Many natural as well as synthetic aminophosphonates bind strongly in the active site of enzymes and act as inhibitors of their function.18 The aminomethylphosphonate binding mode toward metal ions has been extensively studied and summarized.19–21 Generally, differences in basicity, charge, the electron-releasing effect and the size of relevant donor groups between aminophosphonates and aminocarboxylates result in different complexing properties. Aminophosphonates offer the possibility of monodentate coordination of the ligand via the phosphonate group, forming stable protonated complexes. In the case of chelate formation, the thermodynamic stability of complexes of aminophosphonates is usually higher than that of aminocarboxylates, which is caused, at least in the first approximation, by the enhanced basicity of the ligands.
Investigation of metal–phosphonate systems is often hampered by the formation of insoluble complexes and, thus, also the aminomethylphosphonate complexing ability towards Zn(II) has not attracted much attention.22 Protonated [Zn(Hamp)]+, neutral [Zn(amp)] and anionic [Zn(OH)(amp)]− species were identified and their coordination modes were proposed.
Here, we report the results of the study of ternary complexes of the Zn(II)–cyclen system with aminomethylphosphonic acid. The system was studied by a combination of potentiometry, (1H, 13C, 31P) NMR titration and mass spectrometry.
E = E0 − S(−log[H+]) + ja[H+] + jb(pKw/[H+]), |
The protonation constants of the ligands (H2amp or cyclen) were determined at cL = 0.004 M. For the determination of the stability constants in the binary systems, the metal:
ligand molar ratios were 1
:
1, 1
:
2, 1
:
4 for the Zn(II)–amp system and 1
:
1 for the Zn(II)–cyclen system (cZn = 0.004 M). In the ternary system, the Zn
:
cyclen
:
amp ratio was 1
:
1
:
1 (cZn = 0.004 M). Due to slow complexation kinetics (4 to 5 hours were required to reach equilibrium), the binary system Zn(II)–cyclen and the ternary system were studied by the out-of-cell method with an equilibration time a 3 days.24 Three titrations were performed for each system and each ratio. Typical titration curves are shown in Fig. S4 (ESI†).
[Zn(H2O)4(Hamp)2] | |
---|---|
Empirical formula | C2H17N2O10P2Zn |
M r | 356.49 |
Crystal colour | White |
Crystal system | Orthorhombic |
Space group | Pca/21 |
Unit cell dimensions | |
a (Å) | 9.9779(4) |
b (Å) | 12.0890(5) |
c (Å) | 10.2249(5) |
α (°) | 90.00 |
β (°) | 90.00 |
γ (°) | 90.00 |
V c (Å3) | 1233.36 |
Molecules per cell, Z | 4 |
D calc (g cm−3) | 1.920 |
μ (mm−1) | 2.295 |
2θmax | 55° |
Measured reflections | 10![]() |
Independent reflections | 2824 |
R 1[I > 2σ(I)] | 0.0237 |
wR2 | 0.0489 |
In the ternary system, the changes in the 1H NMR spectra of cyclen (Fig. 1) are similar to those previously reported.12,24 The signal of free cyclen disappears at pH 3.5–4 due to Zn(II) complexation. The two multiplets of the Zn(II)–cyclen complex remain unchanged over the whole pH range, which indicates the same coordination mode of cyclen in all species. In the ternary system, H2amp shows a characteristic pH dependence of δH and δC, however, the differences from free H2amp and from the binary Zn(II)–amp system are not significant and, so, they do not provide clear hints of the coordination mode (Fig. 2A and B). Both 1H and 13C NMR spectra show similar trends as observed in systems with glycine (Gly),12 in which analogous species [Zn(cyclen)(HGly)]2+ and [Zn(cyclen)(Gly)]+ were determined. More information could be obtained from 31P NMR data (Fig. 2C). The changes observed for free H2amp are consistent with previous results.29 The decrease of the δP at pH 5–6 indicates intramolecular interaction of the deprotonated phosphonate group with the protonated amino group. The largest changes in the 31P NMR shift are caused by deprotonation of the amino group at pH > 9. The binary system Zn(II)–amp could not be studied at pH above 7 due to the precipitation of the polymeric hydroxido species. However, a significant decrease of the δP at pH 5–6 could be observed. Comparison with distribution diagrams (Fig. S6 in ESI†) shows that the change is associated with deprotonation of the amino group as result of N,O-chelate coordination of the ligand. So, the decrease of the δP results from the formation of a cyclic structure.
![]() | ||
Fig. 1 pH changes of the 1H NMR spectra of the ternary Zn(II)–cyclen–amp system. camp = cZn = 0.05 M, ccyclen = 0.06 M, 25 °C. |
In the ternary system, the pH dependence of δP is different; δP remains constant up to pH 8. The increase at higher pH results from deprotonation of the amino group. The absence of the δP drop at pH 5–6 indicates that H2amp should be coordinated only through the phosphonate group in the ternary system. The phosphonate group might be coordinated in a bidentate mode as suggested by Kimura30 or a monodentate mode with additional interactions with cyclen amine groups through hydrogen bonds.
The determination of the stability constants of the ternary complexes requires detailed and precise characterization of all subsystems under identical conditions. So, the protonation constants of the ligands (cyclen and H2amp) as well as the stability constants in the binary systems (Zn(II)–amp and Zn(II)–cyclen) had to be redetermined (Tables S1–S4 in ESI†).
The protonation constants of H2amp as well as the stability constants of the complexes with Zn(II) (Tables S1 and S2 in ESI†) were found to be close to those previously reported.22,31 The complexes in the Zn(II)–amp system are formed in the pH range 4–10. The distribution diagrams are shown in Fig. S5 and S6 (ESI†). The dominant species at pH 7–8 is the [Zn(amp)] complex. The protonated complex [Zn(Hamp)]+ is present in low abundance (about 10%). The derived value of induced deprotonation logβ111 − log
β011 = 6.03 is significantly lower than the pK value of free amp due to the high stability of the complex. It indicates the formation of the N,O-chelate. Above pH ∼ 8, the formation of the hydroxido-species [Zn(amp)(OH)]− and less abundant [Zn(amp)2]2− is observed.
Because of the slow formation kinetics of macrocyclic complexes, the “out-of-cell” method was used for potentiometric titration of the binary system Zn(II)–cyclen. The protonation constants and stability constants of the complexes (Tables S3 and S4 in ESI†) are in very good agreement with those previously reported.24 The distribution diagrams are shown in Fig. S7 and S8 in the ESI.† The dominant species in the pH range 5–7 is non-protonated [Zn(cyclen)]2+. The protonated complex [Zn(Hcyclen)]3+ was identified in low abundance at pH ∼ 4. In the alkaline range, the coordinated water molecule is deprotonated forming hydroxido complexes [Zn(cyclen)(OH)]+ and [Zn(cyclen)(OH)2].
The ternary system Zn(II)–cyclen–amp was studied by a combination of potentiometry and 31P NMR. Each of the methods separately was found to be insufficient. The data obtained from potentiometry have shown the low stability of the ternary complexes; and mostly, the formation of the complexes is not associated with a change in the protonation state of the ligands (e.g. coordination of the deprotonated phosphonate). 31P NMR titration is more suitable as it allows utilizing some components in a large excess. It leads to a higher abundance of the ternary complexes and better determination of their stabilities. However, the studied system contains many species differing in their protonation states and NMR titration could hardly distinguish between these species. So, only the combination of both techniques gave reliable speciation as well as stability constants of the ternary system. Data were treated with the program OPIUM25 that allows simultaneous treatment of data obtained by various analytical techniques.
Potentiometry was performed using the “out-of-cell” method with equimolar concentrations of all components. 31P NMR titration was performed at various pH values 4–10 and at amp:
Zn ratios from 2
:
1 to 1
:
12. In each sample, cyclen was used in 10% molar excess over Zn(II) to assure full complexation. The results show significant differences between the 31P NMR spectra of free H2amp and those measured in the presence of the Zn(II)–cyclen complex (Fig. 3). The stability constants presented in Table 2 and Table S5 in the ESI† represent the best model obtained from simultaneous fitting of the potentiometry and NMR data.
Equilibrium | log![]() |
---|---|
[Zn(cyclen)]2+ + Hamp− → [Zn(cyclen)(Hamp)]+ | 3.05 |
[Zn(cyclen)]2+ + amp2− → [Zn(cyclen)(amp)] | 3.3 |
[Zn(cyclen)(amp)] + H+ → [Zn(cyclen)(Hamp)]+ | 9.8 |
[Zn(cyclen)(amp)] + [Zn(cyclen)]2+ → [{Zn(cyclen)}2(amp)]2+ | 3.06 |
[{Zn(cyclen)}2(amp)(OH)]+ + H+ → [{Zn(cyclen)}2(amp)]2+ | 9.4 |
The distribution diagrams (Fig. 4) show that the only ternary species [Zn(cyclen)(Hamp)]+ is formed in significant abundance. This species is present in the pH range 4–9. Its abundance ranges from 60% at equimolar concentrations of all components to >90% at a 5-fold excess of Zn(II) and cyclen. At higher pH, the ternary complex undergoes deprotonation yielding [Zn(cyclen)(amp)]. However, its abundance does not exceed 20% even at a 5-fold excess of Zn(II) and cyclen over H2amp. The low abundance of the [Zn(cyclen)(amp)] complex is given by the competition of the hydroxide anion. Water molecules coordinated to the metal ion in the [Zn(cyclen)]2+ complex are deprotonated at pH ∼ 8. At higher pH, the coordination of the hydroxide anion dominates over the formation of ternary complexes which leads to an increasing abundance of free monoprotonated Hamp (Fig. 4A) and low abundance of the [Zn(cyclen)(amp)] complex.
At an excess of [Zn(cyclen)]2+ over H2amp, dinuclear complexes with stoichiometries [{Zn(cyclen)}2(amp)]2+ and [{Zn(cyclen)}2(amp)(OH)]+ are formed. However, their abundance is low (<20%) even at a 5-fold excess of the Zn(II)–cyclen complex over H2amp (Fig. 4C).
The formation of the ternary complexes is also evidenced by the ESI-MS spectra of the Zn(II)–cyclen–amp system (Fig. S9, ESI†). Under equimolar conditions, the dominant detected ion is [Zn(cyclen)Cl]+ (m/z = 271) and a minor signal of [Zn(cyclen)(Hamp)]+ (m/z = 346) was observed. At a 10-fold excess of H2amp, the latter signal becomes dominant indicating an increased abundance of the ternary complex in the system. At a 10-fold excess of the Zn(II)–cyclen complex, the detected signal centered at m/z = 581 confirms the formation of the dinuclear species [{Zn(cyclen)}2(amp)].
The speciation is similar to that previously reported in ternary systems of Zn(II)–cyclen with glycine and alanine except for the dinuclear species.12 On the other hand, such species in which an amino acid connects two [Zn(cyclen)]2+ units was observed in the solid-state structure of [{Zn(cyclen)}2(picolinic acid)]+.24 The value of the protonation constant of the ternary complex (logK = 9.8) is close to the first protonation constant of H2amp (log
K = 9.99). So, [Zn(cyclen)(Hamp)]+ is protonated on the amino group. The constants describing the coordination of non-protonated amp2− and monoprotonated Hamp− to [Zn(cyclen)]2+ are 3.3 and 3.05, respectively. Similar values indicate negligible role of the amino group in the coordination. As suggested above, monodentate or bidentate coordination only through the phosphonate group could be expected in both species. It would point to the bidentate coordination of deprotonated phosphonate in both [Zn(cyclen)(Hamp)]+ and [Zn(cyclen)(amp)] species as expected by Kimura30 or to the oxygen interaction of the O–P group with the NH group of cyclen.
The positive charge localized on the protonated amino group in [Zn(cyclen)(Hamp)]+ does not allow the approach of the additional [Zn(cyclen)]2+ unit. So, the dinuclear species are formed only after amine deprotonation. The constants describing the coordination of the first and the second [Zn(cyclen)]2+ unit are also similar (3.3 and 3.06, respectively). It is in agreement with the high ability of the phosphonate groups for the bridging of the metal ions. Deprotonation of the coordinated water molecule leads to the dinuclear hydroxido species. The corresponding protonation constant (logK = 9.4) is lower than that of the amino group in [Zn(cyclen)(Hamp)]+. It shows a preferential coordination of the hydroxide anion that does not allow the N,O-bidentate coordination of H2amp. It might also indicate that the hydroxide anion also bridges the two Zn(II) ions. The suggested structures of the ternary species are shown in Scheme 1, and the structures of amp and the Zn(II)–cyclen species identified in the studied systems are shown in Scheme S1 (ESI†).
Similar systems with amino acids Zn(II)–cyclen–Gly or Ala show stronger coordination (logK = 4.1 and 4.0, respectively).12 It does not correspond to the basicity of the amino groups of the ligands and so, it also excludes the participation of the amino group in metal binding. If we compare the sterical requirements of phosphonate and carboxylate groups, phosphonate is bulkier and both, P–C and P–O, bonds are longer. Thus, phosphonate occupies more space than carboxylate, which could lead to a preferential square-pyramidal coordination sphere of Zn(II). On the other hand, the O–P–O angle is smaller than in carboxylates and the bidentate coordination of phosphonate and the formation of an octahedral sphere is also possible.
There are many aminophosphonates and aminophosphinates that are used and studied as enzyme inhibitors in medicine or agriculture. The results presented here show that the interaction of aminophosphonates with the Zn(II) centre of the model complex is rather weak and even weaker interaction could be expected for aminophosphinates. The described coordination interaction is insufficient for effective binding of the inhibitor in the enzyme active site. It indicates that the binding of aminophosphonates and aminophosphinates in the enzyme active centre must be dominantly realized through hydrogen bonds and/or through non-bonding interactions with amino acid side chains. As the geometry of each enzyme active site is unique, it implicates a high specificity of the enzyme–inhibitor interaction for aminophosphonate and aminophosphinate inhibitors. It also explains, e.g. the low animal toxicity and the high selectivity of the most utilized herbicide glyphosate (phosphonomethylglycine).
The resulting structure of the Zn(II)–amp complex is sensitive to reaction conditions as found for the published structures. The analogous reaction between ZnCl2 and H2amp upon gentle heating led to a polymeric product in which the coordination sphere was formed with three oxygen atoms from three phosphonates and one chloride anion.33 The formation of the chelate was observed in the case of derivatives with a substituted amino group. The hydrothermal reaction of (1-phenylethyl) aminomethylphosphonic acid with ZnSO4·7H2O and NaCl in a 1:
1
:
0.5 molar ratio, adjusted to pH = 5.7 at 140 °C, afforded crystals in which the unit contains two independent Zn(II) ions, two phosphonate ligands, and one chloride anion. Zn1 possess the O3N1 coordination sphere in which one ligand molecule is coordinated in the N,O-chelating mode and two ligand molecules are coordinated through one phosphonate oxygen atom. The coordination sphere around Zn2 is formed by three phosphonate oxygen atoms and one chloride anion.34
Footnote |
† Electronic supplementary information (ESI) available. CCDC 1528770. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c7nj00254h |
This journal is © The Royal Society of Chemistry and the Centre National de la Recherche Scientifique 2017 |