David A. Rincón*a,
M. Natália D. S. Cordeirob and
Ricardo A. Mosqueraa
aDepartamento de Química Física, Universidade de Vigo, Lagoas-Marcosende, 36310 Vigo, Spain
bREQUIMTE, Departamento de Química e Bioquímica, Universidade do Porto, Rua do Campo Alegre 687, 4169-007 Porto, Portugal
First published on 17th November 2016
Eleven different complexes were found between heroin (or its main metabolite, morphine) and cocaine (or its main metabolite, ecgonine methyl ester) in a B3LYP computational study. Ten of these complexes display intermolecular hydrogen bonds, while only one is a stacked structure. All of them display positive complexation energies in the gas phase that turn into negative values in aqueous solution according to PCM calculations. Complexation energies become even more negative when explicit solvation water molecules are taken into account. Thus, complexes between these compounds could be present in biological media. The electron density of the 11 complexes was analysed within the QTAIM framework distinguishing three terms for every atomic property: (i) geometry distortion; (ii) BSSE estimated by extending the counterpoise (CP) method; and (iii) binding. We notice that: (i) geometry distortion effects are basically localised in the atoms involved in intermolecular bonds (interaction sites); (ii) counterpoise corrections for atomic properties are very small; and (iii) binding CP-corrected effects spread throughout the whole complex. The later are the most significant and indicate the important role played by hydrogens outside the interaction sites as electron density sources and sinks in complex formation.
The first aim of this paper was to study the stability of the complexes formed between heroin (or morphine) with cocaine (or ecgonine methyl ester). To this end, we have performed a conformational analysis for all the complexes that can be formed between the four different pairs of molecules and evaluated their binding energy using the a posteriori counterpoise (CP) correction of the Basis Set Superposition Error (BSSE), proposed by Boys and Bernardi.11 The electron density computed for the conformers was analysed by means of the Quantum Theory of Atoms in Molecules (QTAIM).12 This work also explores how the computed electron density reorganization experienced by monomers upon complexation is influenced by BSSE. This analysis has been done introducing atomic contributions for the CP correction. Thus, atomic electron density reorganizations were split into terms due to binding CP-corrected interactions, geometry deformation, and BSSE.
In order to evaluate the stability of complexes formed between cocaine and heroin and/or their metabolites. The most stable complex, HE1, (Fig. 2) was modeled with PCM and with the insertion of three water molecules in the surroundings of the intermolecular hydrogen bond. To this end, solvent effects were considered by using the integral equation formalism polarizable continuum model (IEF-PCM).16 It treats solvation as a perturbation, defined in terms of the surface apparent charges, which, in turn, depend on the solute charge distribution estimated from the solute wave function.
Furthermore, the van der Waals interactions were also modeled. To this end, the 6-31++G** 6d basis set and the methods of the density functional theory B3LYP and M06 were used to perform the following calculations of the most stable complex formed between heroin and ecgonine methyl ester. Four different optimization procedures were done: (i) conventional optimization, (ii) optimization including the van der Waals interactions through the potential of Grimme,17 (iii) introducing the correction to the basis set superposition error by the counterpoise method and (iv) the sum of the inclusion of Grimme potential with counterpoise method.
ΔcE(AB) = EABAB(AB) − EAA(A) − EBB(B) | (1) |
ΔdefE(A,B) = [EAAB(A) − EAA(A)] + [EBAB(B) − EBB(B)] | (2) |
ΔbE(A,B) = EABAB(AB) − EAAB(A) − EBAB(B) | (3) |
In some cases, two components can be considered for each monomer within ΔdefE. This happens when the geometry adopted by one (or both) of the monomers in the AB complex is closer to a conformer which is not the lowest energy one. Then ΔdefE defined by (2) can be split into four terms (eqn (4)), two are provided by the relative energies of the conformers in the isolated monomers, usually called conformational terms, ΔconfE. The others are due to the geometry distortions experienced by those conformers in the complex, ΔgdE.
ΔdefE(AB) = ΔconfE(A) + ΔgdE(A) + ΔconfE(B) + ΔgdE(B) | (4) |
Once the complex AB has been calculated using a finite basis set, the BSSE comes up and, according to CP correction, the complexation and binding energies are overestimated to an extent given by eqn (5). The CP-corrected energy for the AB complex formation between fragment A and B is obtained by (6), and the corresponding CP-corrected binding energy by (7).
ΔBSSEE(AB) = [EAAB(A) − EABAB(A)] + [EBAB(B) − EABAB(B)] | (5) |
ΔCPcE(AB) = [EABAB(AB) − EAA(A) − EBB(B)] + ΔBSSEE(AB) | (6) |
ΔCPbE(AB) = [EABAB(AB) − EAAB(A) − EBAB(B)] + ΔBSSEE(AB) | (7) |
QTAIM allows a disjoint partitioning of any molecular property, P, of a certain molecular system, S, into their atomic counterparts, P(Ω), (eqn (8)) where Ω denotes an atom in the system.
![]() | (8) |
Thus, molecular energy, E, can be split into atomic ones, E(Ω). In the same vein, atomic contributions to CP-uncorrected or corrected complexation or binding energies, as well as deformation energies can be obtained through eqn (9)–(13). In these equations, either EAA(Ω) = 0 or EBB(Ω) = 0, depending on which molecule contains the Ω atom. Thus, any of these expressions can be reduced to the difference between the atomic energy within the complex, X, or in the isolated molecule, M, enclosing the atom Ω under study. Moreover, it is possible to define an atomic contribution to the CP correction, ΔBSSEE(ΩX) as the difference between those atomic energies obtained for Ω in the isolated molecule with the basis set employed for the monomer, EMX(ΩM), and that used for the whole system, EMX(ΩM), both of them computed in the geometry of the complex (eqn (14)).
![]() | (9) |
![]() | (10) |
![]() | (11) |
![]() | (12) |
![]() | (13) |
ΔBSSEE(ΩX) = EMX(ΩM) − EXX(ΩM) | (14) |
BSSE may affect not only to atomic energies, but to any other atomic property, P, and the corresponding atomic CP correction, ΔBSSEP(ΩX), can be obtained through the generalization of eqn (14), yielding eqn (15).
ΔBSSEP(ΩX) = PMX(ΩM) − PXX(ΩM) | (15) |
Hereafter, specific values of QTAIM atomic properties will be denoted as Pβα(Ωχ), noticing that the density property P was integrated within the atomic basin Ω in the χ molecular system displaying α geometry when using the β basis set. We will pay particular attention to atomic electron populations, making extensive use of: NXX(ΩX), NMM(ΩM), NXX(ΩM), and NMX(ΩM) values. This allows estimating (to our knowledge for the first time) to which extent the depletion or enlargement experienced by the electron population of atoms involved (or not) in intermolecular bonds is affected by BSSE. Thus, the usual variations of atomic electron population computed for a complexation process, ΔcN(Ω), can be corrected by estimating the effects of BSSE on it by considering ΔBSSEN(ΩX), giving rise to the CP-corrected term, ΔcCPN(Ω). Moreover, ΔcCPN(Ω) can be subsequently split into deformation, ΔdefN(Ω), and CP-corrected binding terms, as shown in eqn (16). These terms are given by eqn (17)–(19). While the two formers are physically meaningful, the latter only estimates the effect of a computational shortcoming connected to the basis set size.
![]() | (16) |
ΔdefN(Ω) = NMX(ΩX) − NMM(ΩM) | (17) |
![]() | (18) |
ΔBSSEN(ΩX) = NMX(ΩM) − NXX(ΩM) | (19) |
Moreover, when the geometry of a fragment in a certain complex corresponds to a distortion of a non most stable conformer, the deformation energy involves a conformational term, ΔconfE, given by the relative energy of that conformer.
The diverse structures found for each of the three different pairs of molecules (HE, MC and ME) differ in the atoms involved in the main intermolecular bond, as shown in Table 1.
Complex | Interaction | R | ρBCP | ∇ρBCP | HBCP |
---|---|---|---|---|---|
a Most significant IHBs are in boldface.b Atomic numbering for IHBs and stacking interactions refer to the first monomer in the acronym before the interaction sign (⋯) and to the second one after it. These values were calculated at B3LYP/6-31++G(d,p) 6d in gas phase. | |||||
Intramolecular hydrogen bond | |||||
HE1 | (O1′⋯H–N8)E | 1.791 | 40.17 | 113.68 | −1.35 |
HE2 | (O1′⋯H–N8)E | 1.771 | 42.04 | 119.10 | −1.47 |
MC1 | (O1′⋯H–N8)C | 1.781 | 41.05 | 117.09 | −1.36 |
MC2 | (O1′⋯H–N8)C | 2.058 | 22.95 | 67.97 | −0.50 |
MC3 | (O1′⋯H–N8)C | 1.782 | 40.91 | 116.68 | −1.35 |
MC4 | (O1′⋯H–N8)C | 1.931 | 29.78 | 85.64 | −0.96 |
ME1 | (O1′⋯H–N8)E | 1.778 | 41.29 | 117.38 | −1.40 |
ME2 | (O1′⋯H–N8)E | 1.783 | 40.86 | 116.03 | −1.37 |
ME3 | (O1′⋯H–N8)E | 1.937 | 29.37 | 84.17 | −0.97 |
ME4 | (O1′⋯H–N8)E | 1.893 | 32.30 | 91.52 | −1.12 |
ME5 | (O1′⋯H–N8)E | 1.934 | 29.61 | 84.94 | −0.99 |
![]() |
|||||
Intermolecular hydrogen bond (IHB) | |||||
HE1 | C1′′![]() |
1.960 | 24.34 | 67.71 | −0.55 |
C2′′–H⋯O3′ | 2.487 | 7.94 | 30.75 | 1.09 | |
HE2 | C1′![]() |
1.887 | 28.29 | 81.26 | −0.18 |
C2′–H⋯O3′ | 2.610 | 6.33 | 25.07 | 1.06 | |
MC1 | O6–H⋯O1′′![]() |
1.883 | 25.96 | 85.33 | 0.87 |
O6⋯H6a–C6 | 2.563 | 7.42 | 25.80 | 0.81 | |
O6⋯H4e–C4 | 3.081 | 2.68 | 11.00 | 0.65 | |
MC2 | O3⋯H–N8 | 2.218 | 14.10 | 46.23 | 0.29 |
O3–H3⋯O1′![]() |
2.210 | 13.81 | 58.85 | 1.55 | |
O⋯H8a–C8 | 2.501 | 8.15 | 28.76 | 0.83 | |
O⋯H–C5 | 3.113 | 2.66 | 10.54 | 0.67 | |
O6⋯H–C5 | 3.035 | 2.61 | 10.66 | 0.70 | |
MC4 | O3–H3⋯O1′![]() |
2.179 | 13.79 | 56.85 | 1.28 |
O3⋯H–N8 | 2.426 | 8.31 | 32.56 | 0.94 | |
ME1 | O3⋯H–O3 | 2.039 | 19.20 | 56.12 | −0.29 |
O6⋯H6a–C6 | 4.573 | 0.11 | 0.41 | 0.04 | |
ME2 | O6⋯H–O3 | 1.976 | 22.31 | 64.51 | −0.29 |
ME3 | O3–H3⋯O1′![]() |
2.163 | 14.43 | 59.60 | 1.31 |
O3⋯H8–N8 | 2.353 | 9.80 | 37.30 | 0.87 | |
O⋯Ha–C8 | 2.700 | 5.15 | 19.86 | 0.91 | |
ME4 | O3–H3⋯O1′![]() |
2.108 | 15.04 | 54.97 | 0.76 |
O⋯Hg−–C2′ | 3.472 | 1.16 | 4.98 | 0.37 | |
O6⋯Hg+–C2′ | 3.608 | 0.98 | 3.84 | 0.29 | |
ME5 | O6–H6⋯O1′![]() |
2.098 | 16.41 | 63.68 | 1.05 |
O6⋯H–N8 | 2.392 | 8.82 | 34.30 | 0.92 | |
![]() |
|||||
Stacking interactions | |||||
MC3 | O3⋯C2r | 3.397 | 4.59 | 14.79 | 0.60 |
O3⋯O1′ | 3.597 | 2.46 | 11.20 | 0.63 | |
H5⋯H3r | 2.810 | 1.99 | 6.56 | 0.44 | |
O⋯C3r | 4.053 | 1.39 | 5.25 | 0.34 | |
O6⋯H3r–C3r | 3.319 | 1.87 | 7.04 | 0.50 | |
H2⋯O1′![]() |
3.338 | 1.64 | 6.67 | 0.45 |
All the structures obtained for these adducts display significant positive values for complexation energies (even uncorrected ones). They become slightly larger when zero point vibrational corrections, ZPE, are considered (Table 2). The least positive values of complexation energies correspond to the two complexes established between heroin and ecgonine methyl ester, whose ΔcCPE values are, at least, 10 kJ mol−1 less positive than any ME complex.
Complex | ΔZPE | ΔcEa | ΔBSSEE | ΔcCPE | ΔgdEb | ΔconfE | ||
---|---|---|---|---|---|---|---|---|
H/M | C/E | H/M | C/E | |||||
a ΔZPE corrections not included.b Total deformation energy, as defined by eqn (2), is obtained by adding the corresponding ΔconfE and ΔgdE terms. These values were calculated at B3LYP/6-31++G(d,p) 6d in gas phase. | ||||||||
HE1 | 4.50 | 74.94 | 2.33 | 77.28 | 3.94 | 0.87 | 0.00 | 1.84 |
HE2 | 3.39 | 81.36 | 2.42 | 83.77 | 12.79 | 1.00 | 0.00 | 1.84 |
MC1 | 3.42 | 80.95 | 4.30 | 85.24 | 0.45 | 2.32 | 5.38 | 0.00 |
MC2 | 3.33 | 88.21 | 4.57 | 92.78 | 2.47 | 6.67 | 13.12 | 0.00 |
MC3 | 0.46 | 103.38 | 3.30 | 106.68 | 0.53 | 0.60 | 0.00 | 0.00 |
MC4 | 1.01 | 104.86 | 3.15 | 108.01 | 1.18 | 2.48 | 0.00 | 0.00 |
ME1 | 3.09 | 91.47 | 2.67 | 94.15 | 2.29 | 0.62 | 12.05 | 0.00 |
ME2 | 3.24 | 93.91 | 2.60 | 96.51 | 1.31 | 1.38 | 0.00 | 1.84 |
ME3 | 2.80 | 93.69 | 3.63 | 97.32 | 3.14 | 2.60 | 12.05 | 0.00 |
ME4 | 2.90 | 98.86 | 3.01 | 101.87 | 1.09 | 1.13 | 5.38 | 0.00 |
ME5 | 2.78 | 102.97 | 3.09 | 106.06 | 0.87 | 2.34 | 5.38 | 0.00 |
H·2W + E·3W → HE1·3W + 2W | (20) |
BSSE corrections for this energy were obtained considering the three-step process, detailed in Scheme 1. The two fragments for CP corrections can be clearly identified in the products (steps I and II) or in the reagents (step III) for every step.
Table 3 details ΔCPE obtained for each step in gas phase and PCM modeled aqueous solution. The global complexation process (19) displays a positive value for ΔcCPE in gas phase (9.68 kJ mol−1), but turns into a negative one (−73.30 kJ mol−1) in aqueous solution.
Step | ΔCPE | |
---|---|---|
GAS | PCM | |
H·2W → H·W + W | 17.45 | 14.10 |
E·3W → E·2W + W | −16.49 | −21.46 |
H·W + E·2W → HE1·3W | 9.68 | −73.30 |
The analysis of charge transfer involved in the formation of hydrogen bonds in water clusters have been studied by several research groups.19 Albrecht et al. properly described the charge transfer during the hydrogen bond formation in water clusters,19 this is a consequence of interacting the lone pair on the accepting oxygen with an empty hydride antibond of the donating O–H atoms, . Occupancy of the antibonding orbital raises the energy of the O–H species while stabilizing the oxygen. The stabilization increases as the cluster size increases because of hydrogen bond cooperativity. This can be described through changing cluster geometry: decreasing O⋯O distances coupled with increasing O–H covalent bond lengths indicate a weakening of the covalent OH bond and strengthening of the H⋯O hydrogen bond interaction. Furthermore, there is an increasingly linear O–H⋯O angle as the size of the ring increases. We notice that the explicit inclusion of water molecules stabilizes the complex formed between heroin and one of cocaine metabolites, ecgonine methyl ester. This stabilization is well supported by the geometrical variations observed on the bond distances and angles of the atoms involved in the intermolecular hydrogen bond between heroin and ecgonine methyl ester. The obtained bond distances in gas phase are shown and in aqueous phase are in parenthesis. O⋯O is 2.88737 Å (2.85010 Å), O–H 0.97687 Å (0.97837 Å), H⋯O hydrogen bond interaction 1.95990 Å (1.90066 Å), and O–H⋯O angle 157.647° (162.831°). Thus, the calculations here reported indicate that the formation of this kind of complexes in human fluids cannot be discarded. Moreover, it could be explored as a reason behind the stronger addiction observed for combined abuse of heroin and cocaine.
For this purpose, the results of calculating the interaction energy for HE1 complex will be analyzed in this order: (i) conventional optimization with DFT methods: B3LYP and M06, (ii) with the inclusion of potential Grimme, (iii) with the inclusion of the correction to the basis set superposition error by the counterpoise method and (iv) with the inclusion of Grimme potential with the counterpoise method (Table 4).
Method | Complex | Monomers | EXX(X) | EXX(M) | EMM(M) | ΔcE | ΔCPcE | ΔBSSEE |
---|---|---|---|---|---|---|---|---|
B3LYP | HE1 | H | −1917.48289 | — | −1245.34854 | 72.46 | — | — |
E | — | −672.16195 | ||||||
M06 | HE1 | H | −1916.25656 | — | −1244.55290 | 71.76 | — | — |
E | — | −671.73099 | ||||||
B3LYP-D3 | HE1 | H | −1917.58611 | — | −1245.41173 | 63.45 | — | — |
E | — | −672.19855 | ||||||
M06-D3 | HE1 | H | −1916.27612 | — | −1244.56514 | 67.27 | — | — |
E | — | −671.73660 | ||||||
B3LYP + CP | HE1 | H | −1917.48289 | −1245.34837 | −1245.34797 | 69.01 | 70.99 | 1.98 |
E | −672.16184 | −672.16149 | ||||||
M06 + CP | HE1 | H | −1916.25634 | −1244.55177 | −1244.55135 | 67.93 | 69.94 | 2.01 |
E | −671.73121 | −671.73086 | ||||||
B3LYP-D3 + CP | HE1 | H | −1917.58619 | −1245.41079 | −1245.41035 | 59.01 | 61.24 | 2.23 |
E | −672.19873 | −672.19831 | ||||||
M06-D3 + CP | HE1 | H | −1916.27587 | −1244.56401 | −1244.56358 | 63.48 | 65.60 | 2.12 |
E | −671.73685 | −671.73647 |
The value of the interaction energy obtained with B3LYP is 2.14 kJ mol−1 greater than M06. This is because M06 includes in its definition 27% of potential Hartree–Fock exchange. Instead, B3LYP includes 20% of the difference between the potential of Hartree–Fock exchange regarding the potential of the local density. This difference in the weight of Hartree–Fock exchange potential shows that the interaction, through the polar groups, is stabilized by the electronic exchange.
When the dispersion terms of the nonpolar groups in HE1 complex are taken into account, those stabilize the interaction energy. In the case of the energy of interaction calculated with B3LYP with the inclusion of the potential Grimme, it was obtained that the latter is 10.45 kJ mol−1 more stable than the one obtained with only B3LYP. In the case of M06, a similar trend was observed, which is that the interaction energy calculated with M06 and the van der Waals interactions is 4.48 kJ mol−1 more stable than that obtained only with M06. From these results, the importance of including the terms of dispersion in the calculation of the interaction energy is observed. Although the potential of Grimme not describe the real origin of the dipole–dipole interaction between the molecules forming the complex, but rather its effect on the effective potential of midfield of the respective density functional.
Furthermore, by correcting the interaction energy overlaying the BSSE by the method of counterpoise, it was found that the optimized geometry with B3LYP with the counterpoise method is 2.91 kJ mol−1 more stable than that obtained with only B3LYP. Analogously to the interaction energy values obtained with M06, the difference is 1.82 kJ mol−1.
Finally, at the optimization of the complex geometry with either B3LYP or M06 with the potential of Grimme and the counterpoise method was obtained that the interaction energy obtained with B3LYP is 14.89 kJ mol−1 more stable than that obtained with only B3LYP. Similarly, to M06, the difference is 8.28 kJ mol−1.
Complexation energies, not including ΔZPE values, as well as all their components mentioned and CP corrections indicated in Section 2.3 (Table 2) are successfully reproduced (within 2.0 kJ mol−1) with atomic QTAIM energies, E(Ω).
The values shown in Table 2 and formula introduced in Section 2.3 allow obtaining CP-corrected binding, ΔbCPE, and deformation energies, ΔdefE, for the eleven complexes found. We highlight that all binding energies are positive, precluding negative ΔcCPE values. Clearly, ΔbCPE values are positive because the repulsion between the global positive charges exhibited by both monomers exceeds the stabilization due to IHBs formation or that obtained from stacking interactions in MC3. The least unfavourable binding corresponds to HE complexes (68.1 and 70.6 kJ mol−1 for, respectively, HE2 and HE1). In contrast, the most unfavourable binding corresponds to the stacked complex MC3 (105.6 kJ mol−1).
We also notice that the largest ΔgdE values correspond to heroin and cocaine in HE2 and MC2, respectively. Both molecules display just one low energy conformer, while morphine displays four and the ecgonine methyl ester two.20,21 Consequently, conformational terms, ΔconfE are important only for some of the complexes containing E or M monomers. In fact, the largest deformation energies, ΔdefE, correspond to MC2 (22.3 kJ mol−1) and ME3 (17.8 kJ mol−1) because of the conformational change experienced by the morphine monomer.
We believe it is worth to include here a short comment on how aqueous solution stabilizes these complexes, yielding negative ΔcCPE values in PCM calculations. The global charge of complexes doubles that of monomer and results in a more effective solvent polarisation for the former which compensates the still positive ΔbCPE values observed with PCM. Moreover, the inclusion of explicit water molecules gives rise to larger distances among the most positive atoms in the complex. We highlight these are not the nitrogen atoms, as incorrectly indicated by the usual Lewis structures employed to represent them. As shown in previous electron density analysis,20,21 the positive charge of any of the four monomers is basically shared among the ammonium hydrogen and those hydrogens of the methylammonium group, with a contribution from the bridgehead carbons in H and M and of bicycle hydrogens in C and E.
Table 5 summarizes the bonds whose length is distorted by more than 5 × 10−3 Å. They are concentrated in those regions where IHB are established. Thus, the heroin monomer is mainly distorted around O6 in HE1, while its largest distortions concentrate around O3 in HE2, as the IHBs formed are, respectively, O6–C1′′–O1′′⋯H3–O3 and O3–C1′–O1′⋯H3–O3. They are reinforced in both cases by an additional (and weak) C–H⋯O3 IHB (Fig. 4). In the same vein, the E monomer is mainly distorted, in HE1 and HE2, around the hydroxyl group (O3). The map of distortions is completed by those of the intramolecular HB in C and E monomers, which is present in all the complexes here obtained. We also notice that the bonds including the furan oxygen of H and M monomers (C4–O and C5–O) display moderate distortions in most of the 11 complexes.
Bond in H/M | H, HE1 | H, HE2 | M, MC1 | M, MC2 | M, MC3 | M, MC4 | M, ME1 | M, ME2 | M, ME3 | M, ME4 | M, ME5 |
---|---|---|---|---|---|---|---|---|---|---|---|
C3–O3 | — | 8 | — | 10 | — | 12 | 17 | −1 | 10 | 8 | −1 |
C3–C4 | — | — | — | −5 | — | — | — | — | — | — | — |
C4–O | 5 | — | — | 7 | — | −5 | −0 | 7 | — | — | 7 |
C5–O | −6 | — | — | 7 | — | 6 | 5 | −7 | 8 | — | −4 |
C6–O6 | 11 | — | — | 5 | — | — | — | 18 | 5 | — | 13 |
C6–C7 | — | — | — | — | — | — | — | — | −5 | — | −3 |
O6–H | — | — | 8 | — | — | — | — | — | — | — | — |
O3–C1′ | — | −31 | — | — | — | — | — | — | — | — | — |
C1′![]() |
— | 14 | — | — | — | — | — | — | — | — | — |
O6–C1′′ | −25 | −1 | — | — | — | — | — | — | — | — | — |
C1′′![]() |
13 | 0 | — | — | — | — | — | — | — | — | — |
Bond in E/C | E, HE1 | E, HE2 | C, MC1 | C, MC2 | C, MC3 | C, MC4 | E, ME1 | E, ME2 | E, ME3 | E, ME4 | E, ME5 |
---|---|---|---|---|---|---|---|---|---|---|---|
C2–C3 | — | — | — | — | — | — | — | 5 | — | — | — |
C3–O3 | −4 | −6 | 7 | — | — | — | — | — | — | — | — |
O3–H | 10 | 12 | — | — | — | — | 5 | 6 | — | — | — |
N8–H | — | — | — | −10 | — | −8 | — | — | −10 | −7 | −9 |
O1′⋯H(N8) | 27 | 7 | — | 278 | — | 151 | — | 18 | 165 | 102 | 154 |
O3–C1′′ | — | — | −17 | — | — | — | — | — | — | — | — |
C1′′![]() |
— | — | 10 | — | — | — | — | — | — | — | — |
![]() | ||
Fig. 4 Significant ΔdefN(Ω) (in boldface and in au multiplied by 103), ΔdefE(Ω) (in italics and expressed in kJ mol−1), ΔdefM(Ω) (in au multiplied by 103), and Δdefv(Ω) (in parenthesis and in au) values in HE1. See ESI material† for these values in the remaining complexes studied in this work. ΔdefN(Ω), ΔdefE(Ω), ΔdefM(Ω) and Δdefv(Ω) are not shown when their absolute values are below 10−3 au, 1 kJ mol−1, 10−3 au, and 1 au respectively. All the values were calculated at B3LYP/6-31++G(d,p) 6d in gas phase. |
The principal variations experienced by the main atomic properties due to the geometry deformation involved in the complexation process, ΔdefN(Ω), ΔdefE(Ω), ΔdefM(Ω), and Δdefv(Ω), are shown for HE1, as an example, in Fig. 4, while the corresponding values for all the systems studied herein are reported as ESI material.† All these conformational variations are analyzed below for each monomer.
Heroin (only present in two complexes) distorts to interact through its acetyl groups (at position 6 in HE1 and the one at position 3 in HE2) as H-acceptor. As indicated above, the largest ΔdefRij values are shown by two bonds in the acetyl group: CO (lengthens) and C–O (shrinks). In accordance, ΔdefN(Ω) values for HE1 (Fig. 4) and HE2 (ESI material†) indicate that electron density is transferred from the C
O group to reinforce the CO bond at position 3 or 6 of the heroin backbone. In fact, the methyl group in the acetyl unit only increases scarcely its electron population after this deformation (4 × 10−3 au in HE1 and 7 × 10−3 au in HE2). This distortion of the geometry also reduces the polarisation of both atoms of the carbonyl group and increases that of the attached sp3 oxygen. Overall, the C–O–C
O unit involved in IHB destabilizes more than that the whole H monomer (28 vs. 3.6 kJ mol−1 in HE1, and 41 vs. 13.7 kJ mol−1 in HE2). The difference between both quantities is due to stabilizations spread among the remaining atoms of the monomer.
Morphine is included by nine of the eleven complexes herein studied. When this molecule is isolated, it shows six stable conformers.20 They arise from the two possible orientations of the 3-OH group with regard to the attached aromatic ring (synperiplanar, s, or antiperiplanar, a) and from the three different dispositions of the 6-OH group with regard to its attached aliphatic ring (named g, t, and g′ for approximate values of 60°, 180° or −60° in the C5–C6–O–H dihedral angle). Four of them are observed within the nine complexes. The most stable (ag′) corresponds basically to the M monomer in MC3, MC4, and ME2 complexes, while sg′ closely reminds the geometry displayed in MC1, ME4 and ME5, and those of higher energy are included in ME1 and ME3 (sg) and MC2 (st). In all the complexes, the M monomer displays small distortions from the corresponding conformer, as can be anticipated from ΔgdE values (Table 2). MC1 and MC3 display the least deformed M monomers (Table 5). In the rest of the complexes, the largest |ΔdefRij| values correspond to the C–O bond with the hydroxyl group at positions 3 or 6, depending on which is the interaction site for M in the complex. The electron density of the corresponding oxygen (O3 or O6) depletes, and it is mostly transferred to its attached carbon, whose ΔdefN(Ω) values span from 5 × 10−3 to 31 × 10−3, and rarely to the hydroxyl hydrogen, whose ΔdefN(Ω) values are below 6 × 10−3 au. The most deformed M monomers are those bonded through their both hydroxyl groups (MC2, MC3, and ME1). In these, cases ΔdefN(C3) and ΔdefN(C6) are both positive.
Cocaine is in four complexes. Its distortions are oriented toward forming two types of intermolecular interactions: stacking or IHB. Moreover, C can work as H donor or H acceptor or both things depending on the complex considered. The stacked complex MC3 displays the lowest ΔdefE(C) value, 0.60 kJ mol−1, with no significant bond distortion (all are smaller than 3 × 10−3 Å), either in C or in M (Table 5). The largest |ΔdefRij| values are placed within the benzoyloxy group attached to C3 in MC1, where this monomer is H acceptor exclusively. When cocaine also acts as H donor (MC2 and MC4) N8–H8 shrinks significantly and the N8–H8⋯O1′C1′ intramolecular hydrogen bond lengthens. ΔdefN(Ω) and ΔdefE(Ω) values within the benzoyloxy group follow the same trends detailed above for the acetyl groups of heroin. The electron density lost by the C1′′
O1′′ unit is mainly transferred to O3, and not to the phenyl group. In contrast, the electron density lost by N8 (and attached methyl) in MC2 and MC4 is mainly transferred to the ammonium hydrogen atom.
Ecgonine methyl ester is in seven complexes. It distorts from two of its most populated conformers.21 One observed in ME1, ME3, ME4, and ME5, while the other is in HE1, HE2, and ME2. Its complexes can be also classified considering the role E plays in IHBs: H donor in HE1, HE2, ME1 and ME2; H acceptor in ME4; and both roles in ME3 and ME5. When E acts exclusively as H-donor its interaction site is the 3-OH group, but when it also acts as H-acceptor the H-donor site is the N8–H8 bond. ME1 shows the lowest deformation energy for E (Table 2) with no bond distorted by more than 5 × 10−3 Å (Table 5). Slightly larger ΔdefE(E) values are displayed in the other complexes where the E monomer is exclusively H-donor, and the most distorted bonds are concentrated around the 3-OH group, with the intramolecular hydrogen bond scarcely affected. In contrast, when E is H-acceptor, the largest distortions are experienced by the N8–H bond and the N8–H8⋯O1′C1′ intramolecular hydrogen bond lengthens by more than 0.1 Å. ΔdefN(N8) is positive in the seven E complexes, but there is a quantitative difference between the cases where the E interaction site is 3-OH (1 × 10−3 au < ΔdefN(N8) < 3 × 10−3 au) and those where N8–H is involved in IHBs (ΔdefN(N8) > 8 × 10−3 au).
When the distortions of the four monomers are compared we notice two general trends: (i) heroin acetyl groups produce larger geometry distortion of the aliphatic part of their common backbone than the hydroxyl groups of morphine, as shown by larger ΔdefE values; (ii) cocaine and ecgonine methyl ester monomers that interact affecting their intramolecular hydrogen bond display larger deformation energies than those that interact through 3-OH hydroxyl.
We highlight that, in all cases, if we exclude the stacked complex MC3, distortions are clearly localized in specific areas of each monomer, which coincide with the interaction sites for complex formation. Thus, in morphine, the hydroxyl group and the attached C atom at positions 3 or 6 amount for 35 ± 12% of Σ|ΔdefN(Ω)|, with almost all monomers within the 1σ interval and only those of MC2 (17%), ME2 (52%) and ME3 (21%) out of it. The corresponding contribution for ΔdefE(Ω) is of 44 ± 10%, and only MC2, ME2 and ME3 are more than 1σ from the average. When the same study is carried out along H monomers, just four atoms, the acetyl group at C6 represent 50% of Σ|ΔdefN(Ω)|, 66% of Σ|ΔdefE(Ω)|, 57% of Σ|ΔdefM(Ω)|, and 41% of Σ|Δdefv(Ω)| in HE1. In the same vein, the corresponding four atoms of the acetyl group at C3 represent 41% of Σ|ΔdefN(Ω)|, 60% of Σ|ΔdefE(Ω)|, 38% of Σ|ΔdefM(Ω)| and 25% of Σ|Δdefv(Ω)| in HE2. The smaller localization of the distortions observed for H monomer in HE2 can be explained considering that the interaction site is attached to an aromatic ring. In cocaine, we distinguish three cases: (i) in MC1 the interaction site is part of the benzoyloxy group and C3, O3, C1′′, and O1′′ give rise to 50% and 63% of Σ|ΔdefN(Ω)| and Σ|ΔdefE(Ω)|, respectively; (ii) in MC2 and MC4, cocaine mainly interacts through N8 and H8 and their respective contributions are 29%, 22% and 24%, 35%; and (iii) the atoms of the two C–OH bonds of MC3 display the largest ΔdefN(Ω) and ΔdefE(Ω) values. In fact, they account for almost one half (51%) of Σ|ΔdefN(Ω)| and Σ|ΔdefE(Ω)|. Nevertheless, this percentage diminish up to 32% in ΔdefM(Ω) and even to 12% in Δdefv(Ω), indicating the less localized character of stacking interactions.22 Two different behaviours have been distinguished above for ecgonine methyl ester: interaction as O–H hydrogen donor (HE1, HE2, ME1, and ME2), where C3 and O3 atoms display the largest ΔdefP(Ω) values and simultaneous interaction as H-acceptor and N–H hydrogen donor (ME3, ME4, and ME5), where the most significant ΔdefP(Ω) values correspond to N8, H8, O1′, and C1′. Once again the participation of |ΔdefP(Ω)| for these atoms accounts for significant percentages of the corresponding Σ|ΔdefP(Ω)| quantity.
Even though, as depicted by Fig. 5 for HE1, there are scarce atoms displaying differences between ΔcP(Ω) and ΔcCPP(Ω) (or between ΔbP(Ω) and ΔbCPP(Ω)) within the significant figures. As could be expected, part of the largest |ΔBSSEP(Ω)| values correspond to atoms placed in the region where the number of basis functions centred close enough enlarges in the complex. That is, atoms placed where the two monomers approach each other, no matter if these atoms are involved or not in intermolecular bonds. Thus, we notice that the most positive ΔBSSEN(Ω) values in HE1 correspond to H(O3) in E (the H involved in IHB) and to H(C2r) in H, which is not involved in any intermolecular bond, but placed in the contact region between the monomers of this complex. Nevertheless, other ΔBSSEN(Ω) values do not have a so simple explanation. Thus, we notice that ΔBSSEN(C2) in H is negative in spite it is close to the contact region between monomers and does not participate in any intermolecular bond. It is the unique atom bonded to H(C2r), but we think that ΔBSSEN(Ω) cannot be considered the result of electron density displacement through chemical bonds, as other N(Ω) variations accompanying protonation,24 or other chemical processes like complexation itself. In fact, BSSE effects are consequences of the spatial reinforcement or depletion of the number of basis functions whose numerical values are high enough.
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Fig. 5 Significant ΔBSSEN(Ω) (in boldface and in au multiplied by 103), ΔBSSEE(Ω) (in italics and expressed in kJ mol−1) ΔBSSEM(Ω) (in au multiplied by 103), and ΔBSSEv(Ω) (in parenthesis and in au) values in HE1. Reddish colour atoms indicate atoms where ΔcCPE(Ω) > ΔcE(Ω), while greenish ones are the atoms extra-stabilized according to CP-uncorrected atomic energies, that is: ΔcCPE(Ω) < ΔcE(Ω). See ESI material† for these values in the remaining complexes studied in this work. ΔBSSEN(Ω), ΔBSSEE(Ω), ΔBSSEM(Ω) and ΔBSSEv(Ω) are not shown when their absolute values are below 5 × 10−4 au, 1 kJ mol−1, 5 × 10−4 au, and 0.1 au, respectively. All the values were calculated at B3LYP/6-31++G(d,p) 6d in gas phase. |
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Fig. 6 Most significant ΔbCPN(Ω) (in boldface and in au and multiplied by 103), ΔbCPE(Ω) values (in italics and expressed in kJ mol−1), ΔbCPM(Ω) (in au multiplied by 103), and ΔbCPv(Ω) (in parenthesis and in au) in HE1. See ESI material† for corresponding values for the remaining complexes studied here in. Summation of these atomic variations (excluding ΔbCPM(Ω)) are shown for whole monomers (M), atoms and groups whose variation is not detailed (M′), and hydrogens not detailed or included in the methyl group attached to C3′′ (H(M′)). The arrow indicates the total electron density transference between both monomers (in au multiplied by 103). All the values were calculated at B3LYP/6-31++G(d,p) 6d in gas phase. |
Although the figure details the variations of atomic properties experienced by those atoms involved in intermolecular interactions, we notice that, in contrast with variations due to geometry distortion, which are localized, binding introduces significant modifications in the atomic properties of the whole complex with regard to those in isolated monomers. This is shown in Fig. 6 by comparing the summations of ΔbCPN(Ω) and ΔbCPE(Ω) for each monomer and the corresponding sum extended only to those atoms not involved in intermolecular bonds. As previously shown for much more simple complexes,25 the electron density transferred between monomers in HE1 (0.028 au) (or in any other complex here studied) is exceeded by the loss of electron density shown by the atoms not involved in IHBs in the electron density donor (heroin, in this case) (0.037 au). We highlight the relevant role played by the hydrogens of this part of the molecule, which all together lose 0.040 au. Looking at the acceptor monomer, ecgonine methyl ester in this case, we observe that most of the electron density transferred results in increasing the electron density of that part of the molecule which is again not involved in IHBs (0.020 au). Moreover, the hydrogens of this part of E are the atoms that, in total, increase their electron density the most (0.016 au in HE1). That is, the hydrogens on the periphery of the monomers play a very important role for understanding electron density reorganization in complex formation. This role reminds that of sink or source of electron density, shown initially by Stutchbury and Cooper three decades ago,26 for the hydrogens of methyl groups in protonations and deprotonations, and confirmed by our group for the protonation of a wide series of compounds.24,27
Among the complexes here obtained, ME2 is the simplest case for analyzing how electron density reorganizes because of intermolecular binding. In fact, this is the only complex where we only find one intermolecular bond path (the IHB connecting O6 in M to H3 in E) in QTAIM analysis (Table 1). For this analysis we consider the following four disjoint fragments in ME2: (i) the atomic basins of the H-acceptor C–O–H unit of morphine (C6, O6 and H6) in the IHB; (ii) the remaining atoms of morphine; (iii) the atomic basins of the H-donor unit H–O3–C3 of ecgonine methyl ester; and (iv) the remaining atomic basins of ecgonine methyl ester. They are denoted as fragments I, II, III, and IV in what follows. For each of these fragments we have performed atomic integrations of the proper density function for the zero-flux atomic basins of these fragments, defined from electron densities computed for the complex and the monomer with the geometry and basis functions of the complex (respectively [ρXX(r)]X and [ρXX(r)]M), as indicated by eqn (18). The results indicate that binding is the responsible of transferring 0.023 au from M to E. The electron density of both fragments involved in the IHB (I and III) is reinforced in, 0.050 and 0.009 au, respectively. The electron density of fragment IV is also reinforced by binding (0.013 au), while the atoms not involved in IHB in M monomer (fragment II) are the ones losing electron density (0.072 au). Once again, hydrogens play a leading role in the electron density reorganization as they provide most of the electron density (0.066 au) lost by fragment II and receive almost one half of that received by fragment IV (0.012 au). These results also lead us to conclude that representing the IHB formation as a certain kind of nucleophilic attack from the H-acceptor to the H of the donor unit is unreliable.
It is also worth to discuss the electron density reorganization accompanying MC3 formation, as it is the unique complex formed by stacking interactions. In this case, the electron density flows from C to M. The transference is certainly small (0.004 au), as previously found in stacking complexes,23,28 but exceeds that obtained for other IHB complexes in this study. In contrast with IHB complexes, both molecular fragments defined by collecting the atoms not involved in stacking bond paths, display negative values ΣΔbCPN(Ω) values (−0.028 au in C and −0.027 au in M). Again, both fragments formed by the atoms connected by bond paths reinforce significantly their electron population (0.022 au in C and 0.031 au in M). In this case, the set of hydrogens not included in intermolecular bond paths plays the role of electron density donors (0.021 au in C and 0.035 au in M). The electron density taken from these hydrogens reinforces that of the atoms involved in stacking interactions and also that of heavy atoms in the rest of each monomer.
As shown in the three cases analyzed in detail, the electron density can be transferred from the H/M monomer to the E/C one (HE1, HE2, MC2, ME1, and ME2), or it can follow the opposite way (MC1, MC3, MC4, ME4, and ME5). Moreover, this electron density transference can be negligible (ME3).
Moreover, the calculated interaction energy for the most stable complex, HE1, with M06/6-31++G** 6d is more stable than B3LYP/6-31++G** 6d due to the definition of the former density functional, which gives more weight to the Hartree–Fock exchange potential. Furthermore, the modeling of the dipole–dipole interactions between the molecules of the complex allows a better description of the interaction, which is reflected in a more stable interaction energy of the complex. On the other hand, when the interaction energy is calculated with the inclusion of the dispersion terms with the BSSE correction by counterpoise method is observed that the difference between the latter value and that obtained only with the density functional is equal to the sum of its parts, this is to say that the difference of the interaction energy value obtained with the Grimme potential from the obtained only with the respective density functional plus the difference of the interaction energy value obtained with the counterpoise method from the obtained only with the respective density functional. Whose errors relative to the values obtained with B3LYP and M06 are of 7.22% and 0.36%, respectively.
The reorganization of electron density in the formation of these eleven complexes in gas phase was subjected to a QTAIM analysis distinguishing between deformation and binding terms for atomic properties. While deformation terms are computed for structures obtained with the same basis set, binding terms are affected by basis set superposition error. In this work, we have extended the counterpoise method to obtain CP corrections for binding atomic properties, as the difference between a certain atomic property computed with the electron density of the optimized structure of the complex and with that computed for isolated monomer with the geometry and basis set of the complex. These corrections were found to be very small in the eleven complexes here reported.
The values of the four atomic properties here considered (electron population, total energy, module of the first moment of the electron density and volume) indicate that: (i) geometry distortions affect basically the atoms involved in intermolecular bondpaths and their closest neighbours, allowing the definition of interactions sites for each complex; and (ii) in contrast, binding modifies the atomic properties of the whole molecule in a significant extent. Thus adding the variation of atomic properties due to CP corrected binding out of the interaction sites of one monomer usually exceeds the corresponding value for the interaction sites.
CP corrected binding variations of atomic electron population for complexes established by intermolecular hydrogen bonds, indicate that, overall, those atoms (especially hydrogens) placed outside of the interaction sites of each monomer provide (or receive) more electron density than that transferred from one monomer to another. Thus the electron density reorganization accompanying the formation of intermolecular hydrogen bonds can be described by distinguishing the monomers as electron density donor and acceptor. The non-interacting part of the donor provides electron density to such an extent that allows reinforcing the electron density of its interaction sites and transferring electron density to the acceptor. The acceptor distributes the electron density gained reinforcing that of the interaction sites, but also increasing significantly the atomic populations of several atoms in the rest of the molecule. Therefore, representing the IHB formation as a certain kind of nucleophilic attack from the H-acceptor to the H of the donor unit is unreliable.
Moreover, in the unique stacking complex found for these compounds, the electron density of atoms involved in intermolecular bond paths and heavy atoms in the rest of the monomers is reinforced by depleting that of hydrogens.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c6ra22736h |
This journal is © The Royal Society of Chemistry 2016 |